mRNA_L-elsbetiae_contig1943.5766.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1943.5766.1 vs. uniprot
Match: A0A6H5KJS7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJS7_9PHAE) HSP 1 Score: 207 bits (526), Expect = 1.500e-65 Identity = 95/123 (77.24%), Postives = 108/123 (87.80%), Query Frame = 3 Query: 18 AVQAAATAIGTRFCTHATVPGPLPDIGPLSERRTAAQQHAGLCGRYHAEYVANIDLAAIEERTGGAQISTKNMRNQACYDAGTALNARGRGVQLKRQECFTQACRAVWPDDQPLPAAVVAALS 386 A+QAAA A+G R+C H T PGPLPDIG L ER+ A QQHAGLCG+YHAE++ANID+ +EER GA+I+TK MRNQACYDAGTALNARGRGVQL+RQECFTQACRAVWPDDQPLP AV+AALS Sbjct: 75 AMQAAAVAVGARYCNHDTPPGPLPDIGKLPERQAAVQQHAGLCGKYHAEHIANIDVTMVEERAAGAEITTKRMRNQACYDAGTALNARGRGVQLRRQECFTQACRAVWPDDQPLPVAVLAALS 197
BLAST of mRNA_L-elsbetiae_contig1943.5766.1 vs. uniprot
Match: A0A6H5JXC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXC7_9PHAE) HSP 1 Score: 198 bits (503), Expect = 2.560e-62 Identity = 91/123 (73.98%), Postives = 106/123 (86.18%), Query Frame = 3 Query: 18 AVQAAATAIGTRFCTHATVPGPLPDIGPLSERRTAAQQHAGLCGRYHAEYVANIDLAAIEERTGGAQISTKNMRNQACYDAGTALNARGRGVQLKRQECFTQACRAVWPDDQPLPAAVVAALS 386 A+QAAA A+G R+C H T PGPLPDI L ER+ AAQQHAGLCG+YHAE++ANID+ +E R GA+I+TK MRN+ACYDAGTALNARGRGVQL+RQ+CFT ACRAVWPDDQPLPAAV+ ALS Sbjct: 56 ALQAAAVAVGARYCNHDTPPGPLPDISKLPERQAAAQQHAGLCGKYHAEHIANIDVTMVETRAAGAEITTKRMRNKACYDAGTALNARGRGVQLRRQKCFTHACRAVWPDDQPLPAAVLDALS 178
BLAST of mRNA_L-elsbetiae_contig1943.5766.1 vs. uniprot
Match: A0A6H5KGD0_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGD0_9PHAE) HSP 1 Score: 196 bits (499), Expect = 2.790e-61 Identity = 90/120 (75.00%), Postives = 103/120 (85.83%), Query Frame = 3 Query: 18 AVQAAATAIGTRFCTHATVPGPLPDIGPLSERRTAAQQHAGLCGRYHAEYVANIDLAAIEERTGGAQISTKNMRNQACYDAGTALNARGRGVQLKRQECFTQACRAVWPDDQPLPAAVVA 377 A+QAAA A+G R+C H T PGPLPDI L ER+ A QQHAGLCG+YHAE++ANID+ +EER GA+I+TK MRNQACYDAGTALNARGRGVQL+RQECFTQAC AVWPDDQPLPAA +A Sbjct: 45 ALQAAAVAVGARYCNHDTPPGPLPDISKLPERQAAVQQHAGLCGKYHAEHIANIDVTRVEERAAGAEITTKRMRNQACYDAGTALNARGRGVQLRRQECFTQACCAVWPDDQPLPAAKLA 164
BLAST of mRNA_L-elsbetiae_contig1943.5766.1 vs. uniprot
Match: A0A6H5K3W2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3W2_9PHAE) HSP 1 Score: 181 bits (459), Expect = 3.380e-54 Identity = 81/111 (72.97%), Postives = 94/111 (84.68%), Query Frame = 3 Query: 18 AVQAAATAIGTRFCTHATVPGPLPDIGPLSERRTAAQQHAGLCGRYHAEYVANIDLAAIEERTGGAQISTKNMRNQACYDAGTALNARGRGVQLKRQECFTQACRAVWPDD 350 A+QAAA A+G R+C H T PGPLPDI L E + AAQQHAG CG+YH E++ANID+ ++ER GA+I+TK MRNQACYDAGTALNARGRGVQL+RQECFTQACRAVWPDD Sbjct: 179 ALQAAAVAVGARYCNHDTPPGPLPDISKLPEMQAAAQQHAGSCGKYHGEHIANIDVTMVKERAAGAEITTKRMRNQACYDAGTALNARGRGVQLRRQECFTQACRAVWPDD 289
BLAST of mRNA_L-elsbetiae_contig1943.5766.1 vs. uniprot
Match: A0A6H5KLA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLA7_9PHAE) HSP 1 Score: 137 bits (346), Expect = 8.920e-39 Identity = 62/87 (71.26%), Postives = 73/87 (83.91%), Query Frame = 3 Query: 18 AVQAAATAIGTRFCTHATVPGPLPDIGPLSERRTAAQQHAGLCGRYHAEYVANIDLAAIEERTGGAQISTKNMRNQACYDAGTALNA 278 A+QAAA A+G R+C H T PGPLPDI L ER+ AAQQHAGLCG+YHAE++ANID+ +EER GA+I+TK MRNQACYDAGTALNA Sbjct: 71 ALQAAAVAVGARYCNHDTPPGPLPDISKLPERQAAAQQHAGLCGKYHAEHIANIDVTMVEERVAGAEITTKRMRNQACYDAGTALNA 157
BLAST of mRNA_L-elsbetiae_contig1943.5766.1 vs. uniprot
Match: A0A6H5JI26_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI26_9PHAE) HSP 1 Score: 113 bits (283), Expect = 2.290e-30 Identity = 53/65 (81.54%), Postives = 58/65 (89.23%), Query Frame = 3 Query: 192 IEERTGGAQISTKNMRNQACYDAGTALNARGRGVQLKRQECFTQACRAVWPDDQPLPAAVVAALS 386 +EER GA+I+TK M NQACYDAG ALNARGRGVQL+ QEC TQACRAVWPDDQPLPAAV+AALS Sbjct: 2 VEERAAGAEITTKRMMNQACYDAGMALNARGRGVQLRSQECSTQACRAVWPDDQPLPAAVLAALS 66
BLAST of mRNA_L-elsbetiae_contig1943.5766.1 vs. uniprot
Match: A0A6H5JCG8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG8_9PHAE) HSP 1 Score: 111 bits (278), Expect = 1.760e-28 Identity = 49/78 (62.82%), Postives = 61/78 (78.21%), Query Frame = 3 Query: 18 AVQAAATAIGTRFCTHATVPGPLPDIGPLSERRTAAQQHAGLCGRYHAEYVANIDLAAIEERTGGAQISTKNMRNQAC 251 A+QAAA A+G R+C H T PGPLPDI L ER+ A QQHAGLCG+YHAE++ANI + +EER GA+I+TK +RNQ C Sbjct: 71 ALQAAAVAVGARYCNHDTPPGPLPDIRKLPERQAAVQQHAGLCGKYHAEHIANIGVTMVEERAAGAEITTKRIRNQVC 148
BLAST of mRNA_L-elsbetiae_contig1943.5766.1 vs. uniprot
Match: A0A6H5JXX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXX9_9PHAE) HSP 1 Score: 111 bits (277), Expect = 5.050e-28 Identity = 51/113 (45.13%), Postives = 71/113 (62.83%), Query Frame = 3 Query: 33 ATAIGTRFCTHATVPGPLPDIGPLSERRTAAQQHAGLCGRYHAEYVANIDLAAIEERTGGAQISTKNMRNQACYDAGTALNARGRGVQLKRQECFTQACRAVWPDDQPLPAAV 371 A +G +C H T P P+P + L+ + AA +H GLCG +HA +A + + R+G + RNQACYD G A+N RG+GVQLKR +CFT ACRAVWP ++ + A+V Sbjct: 49 AAKVGAEYCHHDTAPEPMPSMA-LAAAKKAAAEHPGLCGVHHAHIIAAVRTEDVTSRSGFT--AANKFRNQACYDGGMAMNTRGKGVQLKRADCFTHACRAVWPGNEEMEASV 158
BLAST of mRNA_L-elsbetiae_contig1943.5766.1 vs. uniprot
Match: A0A6H5K7F9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7F9_9PHAE) HSP 1 Score: 109 bits (272), Expect = 1.230e-27 Identity = 53/96 (55.21%), Postives = 67/96 (69.79%), Query Frame = 3 Query: 18 AVQAAATAIGTRFCTHATVPGPLPDIGPLSERRTAAQQHAGLCGRYHAEYVANIDLAAIEERTGGAQISTKNMRNQACYDAGTALNARGRGVQLKR 305 A+QAAA A+G R+C H + PGPLPDI L ER+ AA+QHAGLCG+YH+E++ANID+ +EER G +I+TK MRNQ L R GVQ R Sbjct: 45 ALQAAAVAVGARYCNHDSPPGPLPDISELPERQAAARQHAGLCGKYHSEHIANIDVTMVEERAAGTEITTKRMRNQC-------LLRRRDGVQRPR 133
BLAST of mRNA_L-elsbetiae_contig1943.5766.1 vs. uniprot
Match: A0A6H5KUP8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUP8_9PHAE) HSP 1 Score: 107 bits (267), Expect = 8.490e-27 Identity = 50/109 (45.87%), Postives = 67/109 (61.47%), Query Frame = 3 Query: 33 ATAIGTRFCTHATVPGPLPDIGPLSERRTAAQQHAGLCGRYHAEYVANIDLAAIEERTGGAQISTKNMRNQACYDAGTALNARGRGVQLKRQECFTQACRAVWPDDQPL 359 A +G +C H T P P+P + L+ + AA +H GLCG YHA +A + + R+G + RNQACYD A+NARG+GVQLKR ECFT A RAVWP ++ + Sbjct: 47 AAKVGAEYCHHDTAPEPMPSMA-LAAAKKAAAEHPGLCGVYHAHIIAAVRTEDVTSRSGST--AANKFRNQACYDGAMAMNARGKGVQLKRAECFTHARRAVWPGNEEM 152 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1943.5766.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1943.5766.1 >prot_L-elsbetiae_contig1943.5766.1 ID=prot_L-elsbetiae_contig1943.5766.1|Name=mRNA_L-elsbetiae_contig1943.5766.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=53bp MRNQACYDAGTALNARGRGVQLKRQECFTQACRAVWPDDQPLPAAVVAALback to top mRNA from alignment at L-elsbetiae_contig1943:6523..7436+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1943.5766.1 ID=mRNA_L-elsbetiae_contig1943.5766.1|Name=mRNA_L-elsbetiae_contig1943.5766.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=914bp|location=Sequence derived from alignment at L-elsbetiae_contig1943:6523..7436+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1943:6523..7436+ >mRNA_L-elsbetiae_contig1943.5766.1 ID=mRNA_L-elsbetiae_contig1943.5766.1|Name=mRNA_L-elsbetiae_contig1943.5766.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=318bp|location=Sequence derived from alignment at L-elsbetiae_contig1943:6523..7436+ (Laminarionema elsbetiae ELsaHSoW15)back to top |