mRNA_L-elsbetiae_contig194.5747.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig194.5747.1 vs. uniprot
Match: A0A6H5JIC4_9PHAE (Ribos_L4_asso_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIC4_9PHAE) HSP 1 Score: 703 bits (1814), Expect = 2.470e-251 Identity = 362/379 (95.51%), Postives = 371/379 (97.89%), Query Frame = 2 Query: 14 MSARPVVSVFSQEGVAQESTTLPAVFTVPIRPDIVNFVHTNMAKNHRQPYAVSKRAGHQTSAESWGTGRAVSRIPRVQGGGTQRAGQGAFGNMCRGGRMFSPTKIWRRWHRHVNVNQKRYAVASALAATAVPALVMARGHRVEEVPELPLVVDTSLETCTKTAAALATLTALGAAAEVEKVKDSKKIRAGKGKMRNRRYVQRRGPLVIYEKSEGISRAFRNLPGVETACVDRLNLLTLAPGGHIGRFCVWTQAAFDKLDSIYGTYTEKSDVKSNFQLPRHCMTNTDLNRIINSDEIQSVVNDPKPEAQVRRVARKVNPLKNRAVMLTLNPHHEARIAAQAAFQDANKAGRKAVLKERRARKGEGRSFHAKANLEGDVKF 1150 MSARPVVSVFSQEGVAQESTTLPAVFTVPIRPD+VNFVHTNMAKNHRQPYAVSKRAGHQTSAESWGTGRAVSRIPRVQGGGTQRAGQGAFGNMCRGGRMFSPTKIWRRWHRHVNVNQKRYAVASALAATAVPALVMARGHRVEEVPELPLVVDTSLETC+KTAAALATLTALGAAAEVEKVKDSKKIRAGKGKMRNRRYV RRGPLVIY+KSEGISRAFRNLPGVETACVDRLNLLTLAPGGH+GRFCVWTQAAFDKLDSIYGTYTEKSDVKSNFQLPRHCMTNTDLNRIINSDEIQSVVNDPKPEAQVRRVARKVNPLKNR VML+LNP+H+ARIAAQ A Q+ANKAGRKAVLKERR RK R+FHAKANLEGDVKF Sbjct: 1 MSARPVVSVFSQEGVAQESTTLPAVFTVPIRPDVVNFVHTNMAKNHRQPYAVSKRAGHQTSAESWGTGRAVSRIPRVQGGGTQRAGQGAFGNMCRGGRMFSPTKIWRRWHRHVNVNQKRYAVASALAATAVPALVMARGHRVEEVPELPLVVDTSLETCSKTAAALATLTALGAAAEVEKVKDSKKIRAGKGKMRNRRYVMRRGPLVIYDKSEGISRAFRNLPGVETACVDRLNLLTLAPGGHMGRFCVWTQAAFDKLDSIYGTYTEKSDVKSNFQLPRHCMTNTDLNRIINSDEIQSVVNDPKPEAQVRRVARKVNPLKNRGVMLSLNPYHDARIAAQQAQQEANKAGRKAVLKERRGRKTARRAFHAKANLEGDVKF 379
BLAST of mRNA_L-elsbetiae_contig194.5747.1 vs. uniprot
Match: A0A836CFT4_9STRA (Ribosomal protein L4 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFT4_9STRA) HSP 1 Score: 489 bits (1260), Expect = 4.570e-167 Identity = 264/391 (67.52%), Postives = 303/391 (77.49%), Query Frame = 2 Query: 14 MSARPVVSVFSQEGVAQEST-TLPAVFTVPIRPDIVNFVHTNMAKNHRQPYAVSKRAGHQTSAESWGTGRAVSRIPRVQGGGTQRAGQGAFGNMCRGGRMFSPTKIWRRWHRHVNVNQKRYAVASALAATAVPALVMARGHRVEEVPELPLVVDTSLETCTKTAAALATLTALGAAAEVEKVKDSKKIRAGKGKMRNRRYVQRRGPLVIYEKSEGISRAFRNLPGVETACVDRLNLLTLAPGGHIGRFCVWTQAAFDKLDSIYGTYTEKSDVKSNFQLPRHCMTNTDLNRIINSDEIQSVVNDPKPEAQVRRVARKVNPLKNRAVMLTLNPH-----------HEARIAAQAAFQDANKAGRKAVLKERRARKGEGRSFHAKANLEGDVKF 1150 M+ARP VSVFS E A T TLP V T PIRPDIVNFVHTNMAKN RQ YAVSK+AGHQTSAESWGTGRAVSRIPRV GGGTQR+GQGAFGNMCRGGRMF+PTKIWRRWHR +NVNQKRYAVASALAA+AVPALVMARGH+V EVPELPLVVD SL++ KT+ A+ L LGAAA+V+K K+SKKIRAGKGKMRNRRYV RRGPLVIY +S+G+ +AFRNL GVETACVDRLNLL LAPGGH+GRFCVWTQAAF++LD++YGTY EK KS + LPR MTN D+ RIINS E+QSV+ +PEAQ + RK N LKN V+ L+P+ E R +A +A KA ++A K +GR+F+ AN EG VKF Sbjct: 1 MAARPTVSVFSIESGASTGTVTLPCVMTAPIRPDIVNFVHTNMAKNSRQAYAVSKKAGHQTSAESWGTGRAVSRIPRVGGGGTQRSGQGAFGNMCRGGRMFAPTKIWRRWHRRINVNQKRYAVASALAASAVPALVMARGHKVHEVPELPLVVDNSLQSLKKTSDAIKALAKLGAAADVDKAKNSKKIRAGKGKMRNRRYVLRRGPLVIYAESDGLQKAFRNLAGVETACVDRLNLLQLAPGGHMGRFCVWTQAAFERLDAVYGTYAEKG-AKSGYTLPRQQMTNADVARIINSTEVQSVLRAARPEAQRHMLPRKKNALKNLGVLERLSPYAAHARKAATKAQEERKGKRAELLATKRAAAKAQRPAKKALKAQGRAFYEAANQEGSVKF 390
BLAST of mRNA_L-elsbetiae_contig194.5747.1 vs. uniprot
Match: A0A7S2UWI4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWI4_9STRA) HSP 1 Score: 476 bits (1226), Expect = 7.600e-162 Identity = 259/391 (66.24%), Postives = 308/391 (78.77%), Query Frame = 2 Query: 17 SARPVVSVFSQEGVAQE--STTLPAVFTVPIRPDIVNFVHTNMAKNHRQPYAVSKRAGHQTSAESWGTGRAVSRIPRVQGGGTQRAGQGAFGNMCRGGRMFSPTKIWRRWHRHVNVNQKRYAVASALAATAVPALVMARGHRVEEVPELPLVVDTSLETCTKTAAALATLTALGAAAEVEKVKDSKKIRAGKGKMRNRRYVQRRGPLVIYEKSE--GISRAFRNLPGVETACVDRLNLLTLAPGGHIGRFCVWTQAAFDKLDSIYGTYTEKSDVKSNFQLPRHCMTNTDLNRIINSDEIQSVVNDPKPEAQVRRVARKVNPLKNRAVMLTLNPHHEARIAAQAAFQDANK--------AGRKAVLKER---RARKGEGRSFHAKANLEGDV 1144 ++RPVVSVFS E Q +TTLP V T PIRPDIV FVHTN+AKN+RQPYAVSK+AGHQTSAESWGTGRAVSRIPRVQGGGTQRAGQGAFGNMCRGGRMF+PTKIWRRWHR+VNVNQ+RYAVASALAA+A+PALVMARGH+++EVPELPLVVDT + KTA A L LGA A+++K+K +KK+RAGKGK+RNRR+VQRRGPLV+Y+ SE I+ A RNLPGVE A VD LNLLTLAPGGH+GRF VWTQAAFDKLD++YGTY KS +K + LPRH M N DL+R+INSDEIQSVV + +++ R V RK NPLKN VM +NP+ A ++ Q+A K A R+ LK++ +A K E ++F+ KAN EGDV Sbjct: 5 ASRPVVSVFSAEDPTQVKGTTTLPVVMTAPIRPDIVQFVHTNLAKNNRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVQGGGTQRAGQGAFGNMCRGGRMFAPTKIWRRWHRNVNVNQRRYAVASALAASALPALVMARGHKIDEVPELPLVVDTDAQALKKTAKARKLLETLGAKADLDKIKATKKLRAGKGKLRNRRFVQRRGPLVVYDASEEGSIALAVRNLPGVECARVDSLNLLTLAPGGHMGRFIVWTQAAFDKLDALYGTYDAKSSMKKGYSLPRHVMANADLSRLINSDEIQSVVRPAEAKSK-RTVPRKKNPLKNLGVMARINPYAVAARRSEYRAQEARKTAKAEQIAAKRQMALKKKAASKAGKAERKAFYEKANKEGDV 394
BLAST of mRNA_L-elsbetiae_contig194.5747.1 vs. uniprot
Match: A0A6P8IGA8_ACTTE (60S ribosomal protein L4-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IGA8_ACTTE) HSP 1 Score: 448 bits (1152), Expect = 3.310e-151 Identity = 226/361 (62.60%), Postives = 287/361 (79.50%), Query Frame = 2 Query: 14 MSARPVVSVFSQEGVAQESTTLPAVFTVPIRPDIVNFVHTNMAKNHRQPYAVSKRAGHQTSAESWGTGRAVSRIPRVQGGGTQRAGQGAFGNMCRGGRMFSPTKIWRRWHRHVNVNQKRYAVASALAATAVPALVMARGHRVEEVPELPLVVDTSLETCTKTAAALATLTALGAAAEVEKVKDSKKIRAGKGKMRNRRYVQRRGPLVIYEKSEGISRAFRNLPGVETACVDRLNLLTLAPGGHIGRFCVWTQAAFDKLDSIYGTYTEKSDVKSNFQLPRHCMTNTDLNRIINSDEIQSVVNDPKPEAQVRRVARKVNPLKNRAVMLTLNPHHEARIAAQAAFQDANKAGRKAVLKERRARK 1096 M+ARPV++VF++ G TTLPAVF PIRPD+V+FVH+NM+KN RQPYAV+K AGHQTSAESWGTGRAV+RIPRV+GGGT R+GQGAFGNMCRGGRMF+PTK WRRWHR +NVNQ+R+A+ SALAA+A+PAL+M+RGHR+E + E+PLVV S+E+ TKT+AAL L A+ A +VEK K+SKK+RAGKGK+RNRR V R+GPL+IY + +GI +AFRNLPGV+ VDRLNLL L PGGH+GRF +W+Q AF+KLD +YGT+ ++S K+++ LPR MTN+DLNR+INSDE+QSVV KP RR K NPLKN VML LNPH ++ A+ + KA + A+L ++R K Sbjct: 1 MAARPVITVFNENGEKGGQTTLPAVFKAPIRPDVVSFVHSNMSKNKRQPYAVNKLAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRKINVNQRRFAMCSALAASALPALIMSRGHRIENIEEVPLVVADSIESVTKTSAALKLLKAINAYNDVEKCKESKKVRAGKGKLRNRRTVMRKGPLIIYNQDQGIRQAFRNLPGVDLLQVDRLNLLKLCPGGHLGRFIIWSQGAFEKLDGLYGTWKKQSSEKNSYNLPRPMMTNSDLNRLINSDEVQSVVRPTKPRG--RRAPLKKNPLKNLGVMLRLNPHAKSTKRAEILTVERRKAAKAALLAKKRGTK 359
BLAST of mRNA_L-elsbetiae_contig194.5747.1 vs. uniprot
Match: A0A7M5X9R0_9CNID (Ribos_L4_asso_C domain-containing protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5X9R0_9CNID) HSP 1 Score: 444 bits (1143), Expect = 8.150e-150 Identity = 227/342 (66.37%), Postives = 270/342 (78.95%), Query Frame = 2 Query: 14 MSARPVVSVFSQEGVAQESTTLPAVFTVPIRPDIVNFVHTNMAKNHRQPYAVSKRAGHQTSAESWGTGRAVSRIPRVQGGGTQRAGQGAFGNMCRGGRMFSPTKIWRRWHRHVNVNQKRYAVASALAATAVPALVMARGHRVEEVPELPLVVDTSLETCTKTAAALATLTALGAAAEVEKVKDSKKIRAGKGKMRNRRYVQRRGPLVIYEKSEGISRAFRNLPGVETACVDRLNLLTLAPGGHIGRFCVWTQAAFDKLDSIYGTYTEKSDVKSNFQLPRHCMTNTDLNRIINSDEIQSVVNDPKPEAQVRRVARKVNPLKNRAVMLTLNPHHEARIAAQAAF 1039 M+ARP+VSVF+++G TLPAVF PIR DIVNFVHTNMAKN RQPYAV K AGHQTSAESWGTGRAV+RIPRV+GGGT R+GQGAFGNMCRGGRMF+PTK WRRWHR +N NQ+RYAV SA+AA+A+P LVMARGH+++ +PE+P+V ++E+ TKT +A+A L + A +V+K +DSKK+RAGKGKMRNRRY RRGPLV+Y + GI +AFRNLPGVET VDRLNLL L PGGH+GR C+W++ AF KLDSIYGT+ + S K+NF LPRH M DL RIINSDEIQSVV KP A RR K NPLKN A+M LNPH AR+ +AA Sbjct: 1 MAARPLVSVFNEQGDVSSQVTLPAVFKAPIRSDIVNFVHTNMAKNSRQPYAVHKHAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRPINQNQRRYAVCSAVAASALPPLVMARGHKIDGIPEVPVVCSNAIESFTKTKSAVALLKKINAYDDVQKCQDSKKVRAGKGKMRNRRYTMRRGPLVVYNEDHGIQQAFRNLPGVETISVDRLNLLKLCPGGHLGRLCIWSEGAFKKLDSIYGTWRKPSTQKTNFNLPRHKMAMPDLARIINSDEIQSVVRPVKPRA--RRATIKKNPLKNSAIMSRLNPH--ARVTKRAAI 338
BLAST of mRNA_L-elsbetiae_contig194.5747.1 vs. uniprot
Match: UPI001F040475 (60S ribosomal protein L4-B-like n=2 Tax=Alcyoniina TaxID=723662 RepID=UPI001F040475) HSP 1 Score: 444 bits (1143), Expect = 9.060e-150 Identity = 227/359 (63.23%), Postives = 283/359 (78.83%), Query Frame = 2 Query: 14 MSARPVVSVFSQEGVAQESTT-LPAVFTVPIRPDIVNFVHTNMAKNHRQPYAVSKRAGHQTSAESWGTGRAVSRIPRVQGGGTQRAGQGAFGNMCRGGRMFSPTKIWRRWHRHVNVNQKRYAVASALAATAVPALVMARGHRVEEVPELPLVVDTSLETCTKTAAALATLTALGAAAEVEKVKDSKKIRAGKGKMRNRRYVQRRGPLVIYEKSEGISRAFRNLPGVETACVDRLNLLTLAPGGHIGRFCVWTQAAFDKLDSIYGTYTEKSDVKSNFQLPRHCMTNTDLNRIINSDEIQSVVNDPKPEAQVRRVARKVNPLKNRAVMLTLNPHHEARIAAQAAFQDANKAGRKAVLKERR 1087 M+ARP+++V++++G A +T LPAVF PIRPD+VNFVHTNMAKN RQPYAVS +AGHQTSAESWGTGRAV+RIPRV+GGGT R+GQGA+GNMCRGGRMF+PTKIWRRWHR +NVNQKRYAV SALA +A+PALVMARGH++E++PE+PLVV +E+ KT+ A+ L L A +VE+ K SKKIRAGKGKMRNRRYVQR+GPL+IY + GI +AFRNLPGV+ VDR+NLL L PGGH+GRFC+WTQ AF+KLDS+YGT+ + + KS++ LPR M N+DL R+INS+E+QSVV K A +R K NPLKN VML LNP+ + A Q+ K RK V+ ++R Sbjct: 1 MAARPLITVYNEKGEATSNTVALPAVFKAPIRPDVVNFVHTNMAKNKRQPYAVSSKAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAYGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAVCSALAGSALPALVMARGHKIEKIPEVPLVVANGIESVQKTSNAVKLLKDLNAYDDVERCKSSKKIRAGKGKMRNRRYVQRKGPLIIYNEDHGIRQAFRNLPGVDLLSVDRMNLLNLCPGGHLGRFCIWTQGAFEKLDSLYGTWRKAATEKSSYNLPRPIMKNSDLARLINSEEVQSVVRPAK--APAKRAQLKKNPLKNLGVMLKLNPYVKTSKRAAILAQERAKEARKKVIDKKR 357
BLAST of mRNA_L-elsbetiae_contig194.5747.1 vs. uniprot
Match: A0A4D9D8J9_9STRA (Ribos_L4_asso_C domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D8J9_9STRA) HSP 1 Score: 444 bits (1143), Expect = 1.640e-149 Identity = 240/383 (62.66%), Postives = 285/383 (74.41%), Query Frame = 2 Query: 17 SARPVVSVFSQEGVAQESTTLPAVFTVPIRPDIVNFVHTNMAKNHRQPYAVSKRAGHQTSAESWGTGRAVSRIPRVQGGGTQRAGQGAFGNMCRGGRMFSPTKIWRRWHRHVNVNQKRYAVASALAATAVPALVMARGHRVEEVPELPLVVDTSLETCTKTAAALATLTALGAAAEVEKVKDSKKIRAGKGKMRNRRYVQRRGPLVIYEKSE-GISRAFRNLPGVETACVDRLNLLTLAPGGHIGRFCVWTQAAFDKLDSIYGTYTEKSDVKSNFQLPRHCMTNTDLNRIINSDEIQSVVNDPKPEAQVRRVARKVNPLKNRAVMLTLNP----HHEARIAAQAAFQDANKAGRKAVLKERRARKGEGRSFHAKANLEGDVKF 1150 +ARP VSV++ EG + LPAV T PIRPD+VNFV T + KNHRQPYAVS++AGHQTSAESWGTGRAV+RIPRV GGGTQR+GQGAFGNMCR GRMF+PTKIWRRWHR +N+ QKRYAVASALAA+AVPALVMARGHRV+ V E+P V+D S KTA A+ L ALG E++K KDSKKIRAGKGKMRNRRYV RRGPLVIY E G+ +A RN+ GVE A VDRLNLL LAPGGH+GRFC+WT+ AF++LD+++GT TEKS VK ++ LPR M N DL RIINS+E+QSVV E R+ RK NPLKN A M+ +NP H + AA A K +ARK GR+F+ +A+ EGD+KF Sbjct: 3 AARPQVSVYNVEGASVAEVPLPAVLTAPIRPDVVNFVFTGLNKNHRQPYAVSEKAGHQTSAESWGTGRAVARIPRVGGGGTQRSGQGAFGNMCRSGRMFAPTKIWRRWHRKINITQKRYAVASALAASAVPALVMARGHRVDGVAEIPFVLDESFAKVDKTAQAVKVLGALGVGPELDKSKDSKKIRAGKGKMRNRRYVLRRGPLVIYSTGEEGVVKAVRNIVGVEAAHVDRLNLLQLAPGGHLGRFCIWTRGAFERLDAVFGTQTEKSQVKLDYVLPRAPMANADLARIINSEEVQSVVRPAVTETV--RLPRKKNPLKNLAAMVRMNPYVLVHRRQELKRMAAAAGAKXXXXXXXXK--KARKAAGRAFYEQASKEGDIKF 381
BLAST of mRNA_L-elsbetiae_contig194.5747.1 vs. uniprot
Match: UPI000A2A4595 (60S ribosomal protein L4 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A4595) HSP 1 Score: 443 bits (1140), Expect = 2.160e-149 Identity = 227/361 (62.88%), Postives = 281/361 (77.84%), Query Frame = 2 Query: 14 MSARPVVSVFSQEGVAQESTTLPAVFTVPIRPDIVNFVHTNMAKNHRQPYAVSKRAGHQTSAESWGTGRAVSRIPRVQGGGTQRAGQGAFGNMCRGGRMFSPTKIWRRWHRHVNVNQKRYAVASALAATAVPALVMARGHRVEEVPELPLVVDTSLETCTKTAAALATLTALGAAAEVEKVKDSKKIRAGKGKMRNRRYVQRRGPLVIYEKSEGISRAFRNLPGVETACVDRLNLLTLAPGGHIGRFCVWTQAAFDKLDSIYGTYTEKSDVKSNFQLPRHCMTNTDLNRIINSDEIQSVVNDPKPEAQVRRVARKVNPLKNRAVMLTLNPHHEARIAAQAAFQDANKAGRKAVLKERRARK 1096 M+ARPVVS+F++ G TTLPAV PIRPD+V FVH++M+KN RQPY+V+K AGHQTSAESWGTGRAV+RIPRV+GGGT R+GQGAFGNMCRGGRMF+PTK WRRWHR +NVNQ+R+A SALAA+A+PALVM+RGHR+E + E+PLVV S+E+CTKT+ A+ L A+ A +VEK KDSKKIRAGKGK+RNRR R+GPLVIY + +GI +AFRNLPGV+ VDRLNLL L PGGH+GRF VW+Q AF+KLDS+YGT+ + S KSN+ LPR M N+DLNR+INSDEIQSVV K + +R K NPLKN VML LNPH ++ A+ + KA + +L ++R K Sbjct: 1 MAARPVVSIFNENGECCGQTTLPAVLKAPIRPDVVTFVHSDMSKNKRQPYSVNKLAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRKINVNQRRFATCSALAASAIPALVMSRGHRIENIDEVPLVVSDSMESCTKTSGAVKLLKAIHAYEDVEKCKDSKKIRAGKGKLRNRRTTMRKGPLVIYNQDQGIRQAFRNLPGVDLLQVDRLNLLKLCPGGHVGRFIVWSQGAFEKLDSLYGTWKKASTEKSNYNLPRPMMANSDLNRLINSDEIQSVVRPAK--LKTKRTGLKKNPLKNLGVMLRLNPHAKSTKRAEMLTVERRKAAKADLLAKKRGTK 359
BLAST of mRNA_L-elsbetiae_contig194.5747.1 vs. uniprot
Match: A0A1X6NKA5_PORUM (Ribos_L4_asso_C domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NKA5_PORUM) HSP 1 Score: 443 bits (1139), Expect = 3.640e-149 Identity = 231/329 (70.21%), Postives = 267/329 (81.16%), Query Frame = 2 Query: 20 ARPVVSVFSQEGVAQESTTLPAVFTVPIRPDIVNFVHTNMAKNHRQPYAVSKRAGHQTSAESWGTGRAVSRIPRVQGGGTQRAGQGAFGNMCRGGRMFSPTKIWRRWHRHVNVNQKRYAVASALAATAVPALVMARGHRVEEVPELPLVVDTSLETCTKTAAALATLTALGAAAEVEKVKDSKKIRAGKGKMRNRRYVQRRGPLVIYEKSEGISRAFRNLPGVETACVDRLNLLTLAPGGHIGRFCVWTQAAFDKLDSIYGTYTEKSDVKSNFQLPRHCMTNTDLNRIINSDEIQSVVNDPKPEAQ-VRRVARKVNPLKNRAVMLTLNP 1003 +RP VSV S G A S +PAVFT PIRPD+V VHT+MAKN RQPYAVSK AG QTSAESWGTGRAVSRIPRV GGGT R+GQGAFGNMCRGGRMFSPTKIWR+WHR + VNQ+RYAV SALAA+A+PALVMARGH+++ VPE+PLVV E KTAAA+A L LGA +++ KVK SKKIR GKGKMRNRRYVQRRGPL+IYEK GI +AFRNLPGV+T CVDRLNLL LAPGGH+GRFCVWT+ A KLD+IYGT TE + +KS + LP+ M N+DL R+INSDE+Q+VV +P+AQ V RK NPLKN+A+ML LNP Sbjct: 4 SRPTVSVHSTAGEASGSLPMPAVFTAPIRPDVVRSVHTSMAKNKRQPYAVSKMAGMQTSAESWGTGRAVSRIPRVPGGGTHRSGQGAFGNMCRGGRMFSPTKIWRKWHRKIAVNQRRYAVVSALAASALPALVMARGHKIDHVPEVPLVVSAEAEDVAKTAAAVALLKTLGANSDLNKVKASKKIRPGKGKMRNRRYVQRRGPLIIYEKDGGIVKAFRNLPGVDTCCVDRLNLLQLAPGGHVGRFCVWTEGAVAKLDAIYGTATEGAQLKSGYTLPKSMMANSDLVRLINSDEVQAVV---RPKAQRPMYVPRKKNPLKNKALMLKLNP 329
BLAST of mRNA_L-elsbetiae_contig194.5747.1 vs. uniprot
Match: A0A7J7Q3B7_9CHLO (Component of cytosolic 80S ribosome and 60S large subunit n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7Q3B7_9CHLO) HSP 1 Score: 443 bits (1139), Expect = 1.520e-148 Identity = 226/329 (68.69%), Postives = 266/329 (80.85%), Query Frame = 2 Query: 17 SARPVVSVFSQEGVAQESTTLPAVFTVPIRPDIVNFVHTNMAKNHRQPYAVSKRAGHQTSAESWGTGRAVSRIPRVQGGGTQRAGQGAFGNMCRGGRMFSPTKIWRRWHRHVNVNQKRYAVASALAATAVPALVMARGHRVEEVPELPLVVDTSLETCTKTAAALATLTALGAAAEVEKVKDSKKIRAGKGKMRNRRYVQRRGPLVIYEKSEGISRAFRNLPGVETACVDRLNLLTLAPGGHIGRFCVWTQAAFDKLDSIYGTYTEKSDVKSNFQLPRHCMTNTDLNRIINSDEIQSVVNDPKPEAQVRRVARKVNPLKNRAVMLTLNP 1003 +ARP+VSV +G A E TTLPAVF+ PIRPDIV VHTNM KNHRQPYAVS +AGH T+AESWGTGRAVSRIPRV GGGT RAGQGAFGNMCRGG MF+PTK WRRWHR +N+NQKRYAVASALAA+ +PALVMARGHR+E+V E+PLVV + E+ TKT+ AL L A+GA A+ EK +DSK IR GKGKMRNRRYV R+GPLV+Y GIS+AFRNLPGVE A VD LNLL LAPGGH+GRF ++T++AFD+LD I+G+ T S+VK ++LPR CMTN D+ R+INSDE+QSVVN PK E+ + A K NPLKN M+ LNP Sbjct: 3 AARPMVSVQGLDGTAAEQTTLPAVFSAPIRPDIVRTVHTNMNKNHRQPYAVSMKAGHNTAAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGHMFAPTKTWRRWHRKININQKRYAVASALAASGLPALVMARGHRIEQVAEVPLVVSDAAESITKTSKALELLKAVGADADTEKARDSKAIRRGKGKMRNRRYVLRKGPLVVYGADNGISKAFRNLPGVEVASVDALNLLQLAPGGHLGRFVIFTKSAFDRLDKIFGSTTTASEVKKGYKLPRACMTNADVTRLINSDEVQSVVNAPK-ESGAKHYALKKNPLKNLGAMVKLNP 330 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig194.5747.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig194.5747.1 >prot_L-elsbetiae_contig194.5747.1 ID=prot_L-elsbetiae_contig194.5747.1|Name=mRNA_L-elsbetiae_contig194.5747.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=380bp MSARPVVSVFSQEGVAQESTTLPAVFTVPIRPDIVNFVHTNMAKNHRQPYback to top mRNA from alignment at L-elsbetiae_contig194:7760..12919- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig194.5747.1 ID=mRNA_L-elsbetiae_contig194.5747.1|Name=mRNA_L-elsbetiae_contig194.5747.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5160bp|location=Sequence derived from alignment at L-elsbetiae_contig194:7760..12919- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig194:7760..12919- >mRNA_L-elsbetiae_contig194.5747.1 ID=mRNA_L-elsbetiae_contig194.5747.1|Name=mRNA_L-elsbetiae_contig194.5747.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2280bp|location=Sequence derived from alignment at L-elsbetiae_contig194:7760..12919- (Laminarionema elsbetiae ELsaHSoW15)back to top |