mRNA_L-elsbetiae_contig194.5746.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig194.5746.1
Unique NamemRNA_L-elsbetiae_contig194.5746.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig194.5746.1 vs. uniprot
Match: D7FJ56_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ56_ECTSI)

HSP 1 Score: 307 bits (786), Expect = 2.440e-98
Identity = 149/201 (74.13%), Postives = 173/201 (86.07%), Query Frame = 1
Query:  175 SSSPS-YLSLEDQFTFYAAYHSNRVNKAIHLLCIWPILWTGLALMSRCSFGKLPPDVLEHLPLRDEAWGLHPGTIVAVVYISFYLAMDPFAGGAASLLVAASYVTSNMWVADGGSARLAAIAHLVGWLAQFYGHAKHEGRAPALLDNLFQAFLAAPLFVVCEVLFDVGYKKDMQQRIKINAAASIAEFRMSSLTKAAVKKD 774
            S+SPS Y SLEDQFTFYA+YHSNRVNK IHLLCIWPI+WTG ALM++CSFGKLP +VLE LPLRDEAW LH GT V +VYI  YL MDPFAGG AS ++A++Y+T+N+W+A GGSARLA  AH+  WLAQFYGHA HEGRAPALLDNLFQAFLA+PLFVVCEVLFD+GYKKD+Q+R++I + A+IAEFR S    AAVKKD
Sbjct:    3 SASPSSYFSLEDQFTFYASYHSNRVNKFIHLLCIWPIIWTGCALMTQCSFGKLPAEVLEQLPLRDEAWNLHLGTPVVMVYIFVYLVMDPFAGGVASFMMASTYLTTNLWMAGGGSARLATAAHIGCWLAQFYGHAAHEGRAPALLDNLFQAFLASPLFVVCEVLFDLGYKKDLQKRMRIKSDANIAEFRASKA--AAVKKD 201          
BLAST of mRNA_L-elsbetiae_contig194.5746.1 vs. uniprot
Match: A0A6H5L5Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Z3_9PHAE)

HSP 1 Score: 276 bits (706), Expect = 2.490e-86
Identity = 138/192 (71.88%), Postives = 157/192 (81.77%), Query Frame = 1
Query:  226 AYHSNRVNKAIHLLCIWPILWTGLALMSRCSFGKLPPDVLEHLPLRDEAWGLHPGTIVAVVYISFYLAMDPFAGGAASLLVAASYVTSNMWVADGGSARLAAIAHLVGWLAQFYGHAKHEGRAPALLDNLFQA---------FLAAPLFVVCEVLFDVGYKKDMQQRIKINAAASIAEFRMSSLTKAAVKKD 774
            A HSNRVNK IHLLCIWPI+WTG ALM++CSFGKLP +VLE LPLRDEAW LH GT V +VYI  YL MDPFAGG ASL++A++Y+TSN+W+A GGSARLA  AH+  WLAQFYGHA HEGRAPALLDNLFQA         FLA+PLFVVCEVLFD+GYKKD+Q+R+KI A A+IAEFR S    AAVKKD
Sbjct:   15 ADHSNRVNKFIHLLCIWPIIWTGCALMTQCSFGKLPSEVLEQLPLRDEAWNLHLGTPVVMVYIFVYLVMDPFAGGVASLMMASTYLTSNLWMAGGGSARLATAAHIGCWLAQFYGHAAHEGRAPALLDNLFQARRMWPWSWAFLASPLFVVCEVLFDLGYKKDLQKRMKIKADANIAEFRASKA--AAVKKD 204          
BLAST of mRNA_L-elsbetiae_contig194.5746.1 vs. uniprot
Match: A0A553PS92_TIGCA (Uncharacterized protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553PS92_TIGCA)

HSP 1 Score: 163 bits (412), Expect = 3.600e-43
Identity = 91/191 (47.64%), Postives = 122/191 (63.87%), Query Frame = 1
Query:  196 SLEDQFTFYAAYHSNRVNKAIHLLCIWPILWTGLALM---SRCSFGKLP-PDVLEHLPLRDEAWGLHPGTIVAVVYISFYLAMDPFAGGAASLLVAASY-----VTSNMWVADGGSA-RLAAIAHLVGWLAQFYGHAKHEGRAPALLDNLFQAFLAAPLFVVCEVLFDVGYKKDMQQRIKINAAASIAEFR 738
            +LE QFTFYA+YH+N VN AIH++CIWPIL TGL L+   S CS+  LP PD L+ LPL  EA  L+   +VA++Y+  Y+ M+P  GG A+L V A Y     + S  W   G    R+A +  ++ W+ QF GH   EGRAPALLD+L QA L APLFV+ EV F +GY+K   Q+I    A ++ +F+
Sbjct:    9 NLEKQFTFYASYHNNPVNVAIHMICIWPILATGLVLLQLSSFCSWTHLPTPDCLQKLPLGLEA-PLNLALVVALIYVVSYMLMEPVVGGIAALFVTALYFGSWNMVSEDWHVGGYPVWRVALVIFIMAWIIQFIGHGVFEGRAPALLDSLDQALLTAPLFVLLEVFFFLGYRKGFHQKIMKQVAINVKKFK 198          
BLAST of mRNA_L-elsbetiae_contig194.5746.1 vs. uniprot
Match: A0A835ZKQ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKQ2_9STRA)

HSP 1 Score: 152 bits (383), Expect = 5.700e-39
Identity = 88/203 (43.35%), Postives = 117/203 (57.64%), Query Frame = 1
Query:  199 LEDQFTFYAAYHSNRVNKAIHLLCIWPILWTGLALMSRCS-FGKLPPDVLEHLPLRDEAWGLHPGTIVAVVYISFYLAMDPFAGGAASLLVAASYVTSNMWVA--------DGG--SARLAAIAHLVGWLAQFYGHAKHEGRAPALLDNLFQAFLAAPLFVVCEVLFDVGYKKDMQQRIKINAAASIAEFR-MSSLTKAAVKK 771
            L+    FY AYH N VN+AIH++CIWPI+WT  AL         +P  +++  P   +A  LH G ++A  Y+  Y  M+P  G AA+LLV    +++N + A        D G  +A   A+AH+V WLAQFYGHA HE R PAL+DNLFQAFLAAPLFV+  +     Y  D+  RI+      +AEFR +S     AV K
Sbjct:    9 LDKHLAFYCAYHRNTVNEAIHMVCIWPIVWTMFALFRMLGPTAPVPHALVDMAPALGDALVLHIGWLIAAAYVLLYPLMEPRMGTAAALLVVCCLLSANQFAAWADRQPESDTGLSAAAYVAVAHVVCWLAQFYGHAAHEKRKPALMDNLFQAFLAAPLFVLLTLFH---YPSDVFTRIQPRVDEKVAEFRRLSDAAATAVSK 208          
BLAST of mRNA_L-elsbetiae_contig194.5746.1 vs. uniprot
Match: A0A1V6TLX2_9EURO (Uncharacterized protein n=1 Tax=Penicillium steckii TaxID=303698 RepID=A0A1V6TLX2_9EURO)

HSP 1 Score: 150 bits (380), Expect = 8.660e-39
Identity = 85/187 (45.45%), Postives = 109/187 (58.29%), Query Frame = 1
Query:  193 LSLEDQFTFYAAYHSNRVNKAIHLLCIWPILWTGLALMSRCSFGKLPPDVL--EHLPLRDEAWGLHPGTIVAVVYISFYLAMDPFAGGAASLLVAASYVTSNMWVADGGSA--RLAAIAHLVGWLAQFYGHAKHEGRAPALLDNLFQAFLAAPLFVVCEVLFDVGYKKDMQQRIKINAAASIAEFRM 741
            L+LE Q  FY AYH N VN AIH+ C+  +L+TG+ L   C     PPD+L  E+LP          GTI A +Y  FY+ ++P AGG  + LV  S    N  +   G      A   H+  WLAQF GH K EGRAPALLDNL QAFL APLFV  E+LF  GY+ +++QR++ N    I +FR+
Sbjct:    3 LNLEKQLLFYGAYHHNPVNIAIHITCVPILLFTGIVLACNCPTLFTPPDILSFEYLPANA-------GTIGAFIYAIFYVLLEPVAGGLIAPLVIGSAAAGNYLLGTHGMIVNYWAGGIHIFSWLAQFVGHGKFEGRAPALLDNLVQAFLLAPLFVWMEILFFFGYRPELKQRMESNVEKEIQKFRL 182          
BLAST of mRNA_L-elsbetiae_contig194.5746.1 vs. uniprot
Match: A0A1V6P9T8_PENDC (Uncharacterized protein n=1 Tax=Penicillium decumbens TaxID=69771 RepID=A0A1V6P9T8_PENDC)

HSP 1 Score: 148 bits (373), Expect = 8.210e-38
Identity = 88/196 (44.90%), Postives = 110/196 (56.12%), Query Frame = 1
Query:  193 LSLEDQFTFYAAYHSNRVNKAIHLLCIWPILWTGLALMSRCSFGKLPPDVL--EHLPLRDEAWGLHPGTIVAVVYISFYLAMDPFAGGAASLLVAASYVTSNMWVADGGSA--RLAAIAHLVGWLAQFYGHAKHEGRAPALLDNLFQAFLAAPLFVVCEVLFDVGYKKDMQQRIKINAAASIAEFRMSSLTKAAVK 768
            L+LE Q  FY AYHSN VN AIH+ C+  +L+TG+ L   C      PD L  E+LP          GTI A +Y  FY+ ++P AGG  + LV  S    N  + + G      A   H+V WLAQF GH K EGRAPALLDNL QA L APLFV  E+LF  GY+ +++QR + N    IA+FR     K   K
Sbjct:    3 LNLEKQLIFYGAYHSNPVNIAIHVSCVPALLFTGIILACNCPALFSAPDALSLEYLPANA-------GTIGAFIYSIFYILLEPVAGGLLAPLVIGSAACGNYLLGNYGMIVNYWAGGIHIVCWLAQFVGHGKFEGRAPALLDNLVQALLLAPLFVWMEILFFFGYRPELKQRFEKNVEKEIAKFRREQQQKGKAK 191          
BLAST of mRNA_L-elsbetiae_contig194.5746.1 vs. uniprot
Match: S8B9P9_PENO1 (Uncharacterized protein n=3 Tax=Penicillium TaxID=5073 RepID=S8B9P9_PENO1)

HSP 1 Score: 147 bits (371), Expect = 1.530e-37
Identity = 87/194 (44.85%), Postives = 111/194 (57.22%), Query Frame = 1
Query:  193 LSLEDQFTFYAAYHSNRVNKAIHLLCIWPILWTGLALMSRCSFGKLPPDVL--EHLPLRDEAWGLHPGTIVAVVYISFYLAMDPFAGGAASLLVAASYVTSNMWVADGGSA--RLAAIAHLVGWLAQFYGHAKHEGRAPALLDNLFQAFLAAPLFVVCEVLFDVGYKKDMQQRIKINAAASIAEFRMSSLTKAA 762
            L+LE Q  FY AYH+N VN AIH+ C+  +L+TG+ L   C      PD+L   +LPL         GTI A +Y  FY+ ++P AGG  + LV       N  +   G+     AA  H+V WLAQF GH K EGRAPALLDNL QA L APLFV  EVLF  GY+ +++ R+  N    IA+FR     +AA
Sbjct:    3 LNLEKQLLFYGAYHNNPVNVAIHITCVPILLFTGIVLACNCPTLAPTPDILTSNYLPLNA-------GTIGAFIYAFFYILLEPCAGGLLAPLVICFAAVGNYLLGTYGADVNYWAAGIHVVSWLAQFVGHGKFEGRAPALLDNLVQALLLAPLFVWMEVLFFFGYRPELKARMDKNVEMEIAKFRKEQKAQAA 189          
BLAST of mRNA_L-elsbetiae_contig194.5746.1 vs. uniprot
Match: A0A553PRT3_TIGCA (Uncharacterized protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553PRT3_TIGCA)

HSP 1 Score: 147 bits (370), Expect = 3.270e-37
Identity = 84/193 (43.52%), Postives = 114/193 (59.07%), Query Frame = 1
Query:  199 LEDQFTFYAAYHSNRVNKAIHLLCIWPILWTGLALM---SRCSFGKLP-PDVLEHLPLRDEAWGLHPGTIVAVVYISFYLAMDPFAGGAASLLVAASY-----VTSNMWVADGGSARLAA-IAHLVGWLAQFYGHAKHEGRAPALLDNLFQAFLAAPLFVVCEVLFDVGYKKDMQQRIKINAAASIAEFRMSS 747
            LE QFTFYA+YH+NRVN AIHL+C+WPIL T + L+   S C    LP P  L++LP   +A  L+   ++A++YI  Y AM+P AGG  +L+VA  Y     + S  W   G     AA +   + W  QF GH   EGRAPALLD+L QA +   LFV+ E+ F  GY++D   ++      +I EFR S+
Sbjct:   10 LEKQFTFYASYHANRVNVAIHLVCVWPILATAMLLLQLSSYCFLTHLPMPHALQNLPFGLQA-PLNLALVMAIIYIVSYFAMEPIAGGLGALMVAGLYFGTWKMVSEDWYVGGYPIWQAAWVIFFLAWTFQFIGHGVFEGRAPALLDSLDQALITGGLFVLLEIFFFFGYRQDFYHKMMDQVRTNIEEFRESN 201          
BLAST of mRNA_L-elsbetiae_contig194.5746.1 vs. uniprot
Match: A0A1W0A036_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A036_9STRA)

HSP 1 Score: 145 bits (367), Expect = 6.870e-37
Identity = 82/191 (42.93%), Postives = 110/191 (57.59%), Query Frame = 1
Query:  196 SLEDQFTFYAAYHSNRVNKAIHLLCIWPILWTGLALMSRCSFGKLPPDVLEHLPLRDEAWGLHPGTIVAVVYISFYLAMDPFAGGAASLLVAASYVTSNMWVAD----GGSA--RLAAIAHLVGWLAQFYGHAKHEGRAPALLDNLFQAFLAAPLFVVCEVLFDVGYKKDMQQRIKINAAASIAEFRMSSL 750
            +LE Q TFY +YH N +N AIHL+CIWP+L TGLAL   C       + L    L+ E + +  G    +VY+ +Y+ +DP AG  AS L+   +  +  W  D     G    +L A+ H+  W+ QF GH   E RAPALLD+L QA + APLFVV EVL  +GY+K+M  R+K     +IA FR S L
Sbjct:    8 NLEKQVTFYMSYHDNWINMAIHLVCIWPLLITGLAL-GGCLSPFFSNEFLIPFNLQ-EYFVMDLGFFAMIVYVLWYIVLDPIAGTGASALIVYLHALTTKWTIDYVALNGETPWKLLAMIHVTAWILQFIGHGVFERRAPALLDSLDQAIITAPLFVVLEVLLPLGYRKEMHTRVKKQVEINIAAFRKSKL 196          
BLAST of mRNA_L-elsbetiae_contig194.5746.1 vs. uniprot
Match: UPI000B8F86C5 (2-hydroxy-palmitic acid dioxygenase mpo1 n=2 Tax=Folsomia candida TaxID=158441 RepID=UPI000B8F86C5)

HSP 1 Score: 145 bits (365), Expect = 1.240e-36
Identity = 81/200 (40.50%), Postives = 117/200 (58.50%), Query Frame = 1
Query:  199 LEDQFTFYAAYHSNRVNKAIHLLCIWPILWTGLALMSRCSFGKLPPDVLEHLPLRDEAWGLHPGTIV---AVVYISFYLAMDPFAGGAASLLVAASYVTSNMWVADGGSA------RLAAIAHLVGWLAQFYGHAKHEGRAPALLDNLFQAFLAAPLFVVCEVLFDVGYKKDMQQRIKINAAASIAEFRMSSLTKAAVKK 771
            LE+QFTFYA+YH + +NK IH+ C+WPILW+   L       +  P  +  +P       LHP  I    A+ Y   Y+ MD  AG   +LLV  S VT++ +     +       ++AA+ H++ W+AQF GH   EGRAPALLDN+ QAF+ APLFV+ EV+F  GY+KD Q+++ I   A IA+ + ++ +    KK
Sbjct:    6 LEEQFTFYASYHHSTLNKLIHIGCVWPILWSAFVL------SEYIPLQVPFIPENP----LHPPNITLITALFYAGVYIMMDKKAGSLGALLVFVSLVTAHRFYLGAQATWGHPAWQVAAVLHVLCWIAQFIGHGAFEGRAPALLDNMMQAFVMAPLFVLLEVMFFFGYRKDFQKKMWIRVEAEIAKLKRATTSGRNGKK 195          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig194.5746.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJ56_ECTSI2.440e-9874.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L5Z3_9PHAE2.490e-8671.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A553PS92_TIGCA3.600e-4347.64Uncharacterized protein n=1 Tax=Tigriopus californ... [more]
A0A835ZKQ2_9STRA5.700e-3943.35Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1V6TLX2_9EURO8.660e-3945.45Uncharacterized protein n=1 Tax=Penicillium stecki... [more]
A0A1V6P9T8_PENDC8.210e-3844.90Uncharacterized protein n=1 Tax=Penicillium decumb... [more]
S8B9P9_PENO11.530e-3744.85Uncharacterized protein n=3 Tax=Penicillium TaxID=... [more]
A0A553PRT3_TIGCA3.270e-3743.52Uncharacterized protein n=1 Tax=Tigriopus californ... [more]
A0A1W0A036_9STRA6.870e-3742.93Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
UPI000B8F86C51.240e-3640.502-hydroxy-palmitic acid dioxygenase mpo1 n=2 Tax=F... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig194contigL-elsbetiae_contig194:3970..7558 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score308.9
Seed ortholog evalue1.7e-81
Seed eggNOG ortholog2880.D7FJ56
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006629,GO:0006643,GO:0006665,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016042,GO:0030149,GO:0030176,GO:0031224,GO:0031227,GO:0031984,GO:0042175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0046466,GO:0046519,GO:0046521,GO:0071704,GO:0097164,GO:0098827,GO:1901564,GO:1901565,GO:1901575
EggNOG free text desc.sphingoid catabolic process
EggNOG OGsCOG4539@1,KOG3292@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionProtein of unknown function DUF962
Ec32 orthologEc-10_000180.1
Exons4
Model size1805
Cds size606
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig194.5746.1prot_L-elsbetiae_contig194.5746.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig194 4141..6530 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815803.9276092-UTR-L-elsbetiae_contig194:3969..41401622815803.9276092-UTR-L-elsbetiae_contig194:3969..4140Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig194 3970..4140 +
1691683113.1730072-UTR-L-elsbetiae_contig194:3969..41401691683113.1730072-UTR-L-elsbetiae_contig194:3969..4140Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig194 3970..4140 +
1622815803.993491-UTR-L-elsbetiae_contig194:6530..75581622815803.993491-UTR-L-elsbetiae_contig194:6530..7558Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig194 6531..7558 +
1691683113.233978-UTR-L-elsbetiae_contig194:6530..75581691683113.233978-UTR-L-elsbetiae_contig194:6530..7558Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig194 6531..7558 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815803.9426727-CDS-L-elsbetiae_contig194:4140..41981622815803.9426727-CDS-L-elsbetiae_contig194:4140..4198Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig194 4141..4198 +
1691683113.185367-CDS-L-elsbetiae_contig194:4140..41981691683113.185367-CDS-L-elsbetiae_contig194:4140..4198Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig194 4141..4198 +
1622815803.955195-CDS-L-elsbetiae_contig194:4748..49461622815803.955195-CDS-L-elsbetiae_contig194:4748..4946Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig194 4749..4946 +
1691683113.1975398-CDS-L-elsbetiae_contig194:4748..49461691683113.1975398-CDS-L-elsbetiae_contig194:4748..4946Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig194 4749..4946 +
1622815803.967589-CDS-L-elsbetiae_contig194:5420..56141622815803.967589-CDS-L-elsbetiae_contig194:5420..5614Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig194 5421..5614 +
1691683113.2138588-CDS-L-elsbetiae_contig194:5420..56141691683113.2138588-CDS-L-elsbetiae_contig194:5420..5614Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig194 5421..5614 +
1622815803.9777124-CDS-L-elsbetiae_contig194:6374..65301622815803.9777124-CDS-L-elsbetiae_contig194:6374..6530Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig194 6375..6530 +
1691683113.2241516-CDS-L-elsbetiae_contig194:6374..65301691683113.2241516-CDS-L-elsbetiae_contig194:6374..6530Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig194 6375..6530 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig194.5746.1

>prot_L-elsbetiae_contig194.5746.1 ID=prot_L-elsbetiae_contig194.5746.1|Name=mRNA_L-elsbetiae_contig194.5746.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=202bp
MSSSPSYLSLEDQFTFYAAYHSNRVNKAIHLLCIWPILWTGLALMSRCSF
GKLPPDVLEHLPLRDEAWGLHPGTIVAVVYISFYLAMDPFAGGAASLLVA
ASYVTSNMWVADGGSARLAAIAHLVGWLAQFYGHAKHEGRAPALLDNLFQ
AFLAAPLFVVCEVLFDVGYKKDMQQRIKINAAASIAEFRMSSLTKAAVKK
D*
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mRNA from alignment at L-elsbetiae_contig194:3970..7558+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig194.5746.1 ID=mRNA_L-elsbetiae_contig194.5746.1|Name=mRNA_L-elsbetiae_contig194.5746.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3589bp|location=Sequence derived from alignment at L-elsbetiae_contig194:3970..7558+ (Laminarionema elsbetiae ELsaHSoW15)
GTCCAACCTCGCCCCCCCCCTACCACGCCTAGCAAGGAAAACTGCTATTT AGCACATTACAAACGACTGCTGGCTCGGACTCAGAGGAGCAGGATTCCTG GATTTCTGGATTTCTGGATTGAAAGAGTACTCACGTACTCACTTCGCCGT TGGCCGTGGGCTAGGCACGAGATGTCCTCTTCTCCTTCGTACTTGTCGCT GGAGGACCAGTTCACATTTTACGCCGCATGTAGGTTCGGGTTCGTTCTCA ATCCTGCAGTGGATATCCGTAAACCCACCAGCAAGCCTCTCTCGCTCTCT CGCTTTCTTTCTTGGACACGTTTGTTCTTCAACATGATGACCAGTTGGCA AATCCAGCGGCGACGTGCACCGTTTCGATTTTCGAGTCTTTCGGCGCGTG AAACCAATGCCCAGCAGTCCTTCGAAGACCCCCTCCCCATTACGAAGCAC CCCCTCGCTGTCCGCCACAAGTTCGGTATAACTGCTCTTGTGTTGTGTCA AGGAGGAGAACGGCTCTATCTAAATATTAGGAAGTCGTTTGAAAACCAAA GCCTGCAAGCCTGCATCGAGCCAGCGTACCCCCTCTCTTCATTAATGTCG TCCCCTGCAGCTGGACCTAGAGCCGCCCCCAGGCCCGCCAGGCTCTACTA AACTTGCATATCCCCCGAACATCAACAACAAGCATGCCGAGTAGCAACCG CAACCTCAACCGTCGTGCAGAGGAGAAGCCGGGCTCATTTGTCTCCGTGC TGTCCGTGTCTTGCTTTTTGGATCGGCAGATCACAGCAACCGCGTCAACA AGGCGATCCACCTGCTGTGCATCTGGCCCATCCTTTGGACGGGCTTAGCG CTTATGTCTCGGTGTTCTTTCGGAAAGCTACCCCCCGACGTTCTAGAGCA CCTTCCCCTGAGAGACGAGGCCTGGGGCCTTCATCCAGGGACAATCGTCG CCGTGGTGTACATCTCGTTCTACCTAGGTGAAGACAGATAATCCGTCACG CATTGTAACCCCCGCACACCCCACCCGCTCTCCGCCCGTCCTCTGCAAAA GGAGATCGATCCTGTGCAAGGTTGTTGACGCACGACACGACAGGAGTTTG TGGCAATGCATTGGTAGGCTTTTGCAGCACCCCCCGTCATATATAGTAGC TCCGATGATTCGACCGCTTCTACACACCTTGTCCTCTAGCTATGCACCTG AACACGGCTAAATTAGGCTGGCCTTGCCCCTCTGTTGTAACATCTAACTC GTACCTGGATCCTACACATGAGCAGCACCAGTGCAAGTGGTGCAAGTGCA TGTGGCCAATTCCTCCCCCTCTCAAGTAATCCTACGCATGGGCCGATCGA TGGACCGTTCGACCCTCTGTAACGCAACGCGTACTCACAAGCACGATACA TACAACACACAAAAAGCGCACTGCATCACGTTGGCGCACTTTTTTCTGCA GCCATGGACCCGTTCGCCGGAGGCGCGGCTTCCCTGCTGGTAGCTGCGTC GTACGTCACGTCCAACATGTGGGTTGCGGACGGGGGATCTGCGCGCCTGG CGGCAATCGCACACCTCGTCGGGTGGCTCGCTCAGTTCTACGGGCACGCG AAGCACGAGGGCAGGGCCCCGGCGCTGCTCGACAACCTCTTCCAGGTGTT TGTTTGTTTGGTGTTTCTTCACATTAGCTCGTATAATCGAGATTGCTAAT TCCCAAAAATCTAGCAACTCACGGCCCGTGGTGTGTTCTTCGAGATACTT ATGTACCGCCGCCGTAATAATATCCCTTGAGAACGCCCCGCGGGGTGTAA ACGGTTTTTGGAGCCGATTTTCTCCGCAATGAGCGGGTTGCTTTGTACCG TCGAGCGGTGCGCCCTTGGGAGGATCTCGTCGAGATCTTTCCAAATTTAA TATTTTTGTTTTTTCGTGCCCGCTCTCGGTTGTGGAGAAAACCGGCTTCG AAAAATGTTTACACCCCCGGGGGCTTTCTCAAGGGATATTATGGTGTGTG CTTCTATGCGGATGAGTTCGGGAGCGACCTATGTATTTCAAATCCGTCCC TATTCGTTTTCCAGCCCGATGGCTATTCTCGGCTGTTGTGTTTCGTTTTG CTGTTTTCCACGCGGTCAAGCCCTTAACCTTCCTGGCATTTTTCTGGCCT CTCGAATCTTCGAAACCCCCATCTTCCCGCCCCGTCCTTCCTGACGTTGA GTACTACTGTAGAACCTTTGGCGACGCCTTTGGTGGTATATATATACCTT TGGTCGTAAATATGTATTGCCTTTGATGGCCTGTCTCGAGTCTCGTGGGA CAAAGACAGACGTGGTGGAAGGGTCAAATGGCCGAGGTGCGCAAAGGAGC CCATTTCAAGGTGTCTAATGCTCTCTGTCAACACCCGACTCTTGTGAAAT CGCAGGCGTTCTTGGCGGCGCCGCTGTTCGTGGTGTGCGAGGTGCTCTTT GACGTGGGGTACAAGAAGGACATGCAGCAGCGGATTAAAATCAACGCCGC CGCCAGCATCGCGGAGTTCCGCATGTCGAGCTTGACCAAGGCGGCGGTCA AAAAGGACTAAAGAGGGCTCCAAGGCAAAGCCTTGAGGGGGAGAACCAAT CGGCTTGTCTGTACTCCATAGATACATGTGTTTGTCTTGCGGCAGGCAGT GTTGTGCATGAGACGAGACCGCCACTAATGCTGAGATTGGTCCAGGCGGC TGTGTGACAGTAGTGTTACGTACATTTGTGGTTTGTGTTTTTGTTTGTCC CTAAATGCACCGGTAAGCATACATACGAAGCAGCTTATTTTGCGCGTGTG TAGATATATTTCATGCCATGTTTTGATTCTCCTCTGTTGGTACTATGGTA GTGTTTAAGACCCTTTGTAGCGAAAGCACCGCATGTAGGCAGCAATTCGA AGTATTACAATATACATTAGAATCTTGGAACGAGAAGCCAGAAGAAGCGT CAACGCCCCAATGCAGGACCAGCAATGAGACAGCCCACACGATGCATTCG ATCGAGCCCGTCATCCTTGTGGGCATTTTGAGGCTGCACTATTTTTATGT CTGGTCTATCTTCAGCCATCGCAACGATGACTGAAGATGATAGATCAGAC AGAACAAGCGCTTCACAATGCCGACAAAGCTGACTTGCAACTATCTAGAG ACTCGGTATTTTGATGCTGCATGATGAACGATTGTTGTGTCGTGGTGTGC ATGTACATACTCCAAAATTGTCTTGTCTTGATTCCTGTGCTGGTTACGGT GGTGACACAAGACAGCAGTATTTGTGTGACGGTCTGAACCATCTCTACTT CGAGGGTGAGCTATCGGTGCATCTTTGCGCGTATTCCCGTTCAAATTCCT CGTACAAGTGCAGTCTTGATAAAACTTCGGAAGTAGTAGATATGTCCAGC GCGTGGTTTCATCGTGTTGAATTGGCTTTGTCACTGTGATTGTTACTTTT TTGGTGAACCCGACCCATGTTCGATGGCTGTCACTACATGCGAAATGGAA GTATGTTCACCGGTTAATAAGTTAAGAGACCGTTGGCCCTCGGGTTCCGA CGTTTGTTTATCCCGAAACGCAAAATCTGCAATTGTTAC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig194:3970..7558+

>mRNA_L-elsbetiae_contig194.5746.1 ID=mRNA_L-elsbetiae_contig194.5746.1|Name=mRNA_L-elsbetiae_contig194.5746.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1212bp|location=Sequence derived from alignment at L-elsbetiae_contig194:3970..7558+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCCTCTTCTCCTTCGTACTTGTCGCTGGAGGACCAGTTCACATTTTA
CGCCGCATATGTCCTCTTCTCCTTCGTACTTGTCGCTGGAGGACCAGTTC
ACATTTTACGCCGCATATCACAGCAACCGCGTCAACAAGGCGATCCACCT
GCTGTGCATCTGGCCCATCCTTTGGACGGGCTTAGCGCTTATGTCTCGGT
GTTCTTTCGGAAAGCTACCCCCCGACGTTCTAGAGCACCTTCCCCTGAGA
GACGAGGCCTGGGGCCTTCATCCAGGGACAATCGTCGCCGTGGTGTACAT
CTCGTTCTACCTAGATCACAGCAACCGCGTCAACAAGGCGATCCACCTGC
TGTGCATCTGGCCCATCCTTTGGACGGGCTTAGCGCTTATGTCTCGGTGT
TCTTTCGGAAAGCTACCCCCCGACGTTCTAGAGCACCTTCCCCTGAGAGA
CGAGGCCTGGGGCCTTCATCCAGGGACAATCGTCGCCGTGGTGTACATCT
CGTTCTACCTAGCCATGGACCCGTTCGCCGGAGGCGCGGCTTCCCTGCTG
GTAGCTGCGTCGTACGTCACGTCCAACATGTGGGTTGCGGACGGGGGATC
TGCGCGCCTGGCGGCAATCGCACACCTCGTCGGGTGGCTCGCTCAGTTCT
ACGGGCACGCGAAGCACGAGGGCAGGGCCCCGGCGCTGCTCGACAACCTC
TTCCAGCCATGGACCCGTTCGCCGGAGGCGCGGCTTCCCTGCTGGTAGCT
GCGTCGTACGTCACGTCCAACATGTGGGTTGCGGACGGGGGATCTGCGCG
CCTGGCGGCAATCGCACACCTCGTCGGGTGGCTCGCTCAGTTCTACGGGC
ACGCGAAGCACGAGGGCAGGGCCCCGGCGCTGCTCGACAACCTCTTCCAG
GCGTTCTTGGCGGCGCCGCTGTTCGTGGTGTGCGAGGTGCTCTTTGACGT
GGGGTACAAGAAGGACATGCAGCAGCGGATTAAAATCAACGCCGCCGCCA
GCATCGCGGAGTTCCGCATGTCGAGCTTGACCAAGGCGGCGGTCAAAAAG
GACTAAGCGTTCTTGGCGGCGCCGCTGTTCGTGGTGTGCGAGGTGCTCTT
TGACGTGGGGTACAAGAAGGACATGCAGCAGCGGATTAAAATCAACGCCG
CCGCCAGCATCGCGGAGTTCCGCATGTCGAGCTTGACCAAGGCGGCGGTC
AAAAAGGACTAA
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