mRNA_L-elsbetiae_contig19368.5738.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig19368.5738.1 vs. uniprot
Match: D7FX39_ECTSI (Cysteine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX39_ECTSI) HSP 1 Score: 378 bits (971), Expect = 3.780e-127 Identity = 185/221 (83.71%), Postives = 197/221 (89.14%), Query Frame = 1 Query: 1 QDGAGEGGGISDATEFGSEKENAKDFALWKAYKPEDGDVFWETPIGKGRPGWHIECSAMARRFLGDTVDVHAGGIDLVFPHHENEVAQSEGFTGKPFCSCWVHNAFVNVDGEKMSKSKGNFLTLSGTLPTALDVRGFRYLVVSSQYRTTLGFSSKSLEGAKNTVKRLDKLRVALLEAAAASGEAEGAGEGEVSPALLEVVPKSLEGFDAGMNDDLNTPRCA 663 +DGAGEGGG++DA EF SEKE+AKDFALWK YKPEDG+VFW+T +GKGRPGWHIECSAMAR+FLGDT+DVHAGGIDLVFPHHENEVAQSEGFTGKPFC CWVHNAFVNVDGEKMSKSKGNFLTL TL TALDVR FRYLVVSSQYRTTLGFS KSL+ AKNT++RLDKLRVAL AAAA E E EVS LLEVVPKSLEGFDAGMNDDLNTPR A Sbjct: 180 EDGAGEGGGVNDAAEFESEKEDAKDFALWKGYKPEDGEVFWDTLLGKGRPGWHIECSAMARKFLGDTLDVHAGGIDLVFPHHENEVAQSEGFTGKPFCRCWVHNAFVNVDGEKMSKSKGNFLTLKSTLATALDVRAFRYLVVSSQYRTTLGFSMKSLQSAKNTLRRLDKLRVALEAAAAAGNEEERGDASEVSRELLEVVPKSLEGFDAGMNDDLNTPRAA 400
BLAST of mRNA_L-elsbetiae_contig19368.5738.1 vs. uniprot
Match: A0A6H5J887_9PHAE (Cysteine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J887_9PHAE) HSP 1 Score: 381 bits (979), Expect = 2.270e-121 Identity = 186/221 (84.16%), Postives = 198/221 (89.59%), Query Frame = 1 Query: 1 QDGAGEGGGISDATEFGSEKENAKDFALWKAYKPEDGDVFWETPIGKGRPGWHIECSAMARRFLGDTVDVHAGGIDLVFPHHENEVAQSEGFTGKPFCSCWVHNAFVNVDGEKMSKSKGNFLTLSGTLPTALDVRGFRYLVVSSQYRTTLGFSSKSLEGAKNTVKRLDKLRVALLEAAAASGEAEGAGEGEVSPALLEVVPKSLEGFDAGMNDDLNTPRCA 663 +DGAGEGGG++DA +F SEKE+AKDFALWK YKPEDG+VFW+T +GKGRPGWHIECSAMAR+FLGDT+DVHAGGIDLVFPHHENEVAQSEGFTGKPFC CWVHNAFVNVDGEKMSKSKGNFLTL TL TALDVR FRYLVVSSQYRTTLGFS KSLE AKNT++RLDKLRVAL AAAA E EG EVS LLEVVPKSLEGFDAGMNDDLNTPR A Sbjct: 876 EDGAGEGGGVNDAADFESEKEDAKDFALWKGYKPEDGEVFWDTSLGKGRPGWHIECSAMARKFLGDTLDVHAGGIDLVFPHHENEVAQSEGFTGKPFCRCWVHNAFVNVDGEKMSKSKGNFLTLKSTLGTALDVRAFRYLVVSSQYRTTLGFSMKSLESAKNTLRRLDKLRVALEAAAAAGNEGEGGDAREVSRELLEVVPKSLEGFDAGMNDDLNTPRAA 1096
BLAST of mRNA_L-elsbetiae_contig19368.5738.1 vs. uniprot
Match: A0A835ZDL4_9STRA (Cysteine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDL4_9STRA) HSP 1 Score: 308 bits (789), Expect = 3.780e-100 Identity = 152/221 (68.78%), Postives = 167/221 (75.57%), Query Frame = 1 Query: 1 QDGAGEGGGISDATEFGSEKENAKDFALWKAYKPEDGDVFWETPIGKGRPGWHIECSAMARRFLGDTVDVHAGGIDLVFPHHENEVAQSEGFTGKPFCSCWVHNAFVNVDGEKMSKSKGNFLTLSGTLPTALDVRGFRYLVVSSQYRTTLGFSSKSLEGAKNTVKRLDKLRVALLEAAAASGEAEGAGEGEVSPALLEVVPKSLEGFDAGMNDDLNTPRCA 663 QDGAGEGGGISD E+ ++KE+AKDFALWKAYKPEDG VFWET +GKGRPGWHIECSAMAR++LGDT+D+HAGGIDLVFPHHENEVAQSEG TGKPFC+CWVHN FVNV GEKMSKSKGNFLTL G L TALDVR FRYLVV+SQYRT L F+ L GAK+ VKRLDK R AL +A L F GM+DDLN PR A Sbjct: 172 QDGAGEGGGISDLDEYETDKESAKDFALWKAYKPEDGPVFWETALGKGRPGWHIECSAMARKYLGDTIDIHAGGIDLVFPHHENEVAQSEGATGKPFCNCWVHNGFVNVGGEKMSKSKGNFLTLRGALATALDVRAFRYLVVTSQYRTMLNFTPDVLAGAKSAVKRLDKARAALSKALEGXXXXXXXXXXXXXXXXXXXXXXXLAQFKGGMDDDLNAPRAA 392
BLAST of mRNA_L-elsbetiae_contig19368.5738.1 vs. uniprot
Match: W7U426_9STRA (Cysteine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U426_9STRA) HSP 1 Score: 303 bits (775), Expect = 5.990e-97 Identity = 148/220 (67.27%), Postives = 176/220 (80.00%), Query Frame = 1 Query: 7 GAGEGGGISDATEFGSEKENAKDFALWKAYKPEDGDVFWETPIGKGRPGWHIECSAMARRFLGDTVDVHAGGIDLVFPHHENEVAQSEGFTGKPFCSCWVHNAFVNVDGEKMSKSKGNFLTLSGTLPTALDVRGFRYLVVSSQYRTTLGFSSKSLEGAKNTVKRLDKLRVALLEAAAASGEAEGAGEG-EVSPALLEVVPKSLEGFDAGMNDDLNTPRCA 663 GA +GGGISDA E+ ++K +AKDFALWKAYK EDG VFWET +GKGRPGWHIECSAMARRFLG TVD+HAGG+DLVFPHHENE+AQSEG +G+ FC CWVHN FVNV+ EKMSKSKGNFLTL G+L T LDVR FRYLVV+SQYR L F+++ L GA+ T+ RLDK++ AL A E +GA EG E+ + V+ K++ GF+AGM DDLNTPR A Sbjct: 253 GAAKGGGISDADEYVADKGDAKDFALWKAYKAEDGPVFWETALGKGRPGWHIECSAMARRFLGPTVDLHAGGVDLVFPHHENEIAQSEGASGERFCRCWVHNGFVNVENEKMSKSKGNFLTLRGSLETGLDVRAFRYLVVTSQYRMPLNFNTEGLAGARKTILRLDKVKAALTRVAR---EGKGAEEGGEIDEEMQGVIDKAVAGFEAGMADDLNTPRAA 469
BLAST of mRNA_L-elsbetiae_contig19368.5738.1 vs. uniprot
Match: A0A7S2S4N2_9STRA (Cysteine--tRNA ligase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S4N2_9STRA) HSP 1 Score: 280 bits (715), Expect = 3.060e-89 Identity = 137/221 (61.99%), Postives = 163/221 (73.76%), Query Frame = 1 Query: 1 QDGAGEGGGISDATEFGSEKENAKDFALWKAYKPEDGDVFWETPIGKGRPGWHIECSAMARRFLGDTVDVHAGGIDLVFPHHENEVAQSEGFTGKPFCSCWVHNAFVNVDGEKMSKSKGNFLTLSGTLPTALDVRGFRYLVVSSQYRTTLGFSSKSLEGAKNTVKRLDKLRVALLEAAAASGEAEGAGEGEVSPALLEVVPKSLEGFDAGMNDDLNTPRCA 663 QDGA EGGG+S + +F EK + +DFALWKAYKP+DGDV W T +GKGRPGWHIECSAM R F GD+VD+HAGGIDLVFPHHENE+AQSE TGK FC WVHN FVNV+ EKMSKSKGNFLTL GT T L+VR FRY VV+SQYR L FS ++L +K+ ++RLD+ R A+ EAA + G A E SP + +V L+ MNDDLNTPR + Sbjct: 155 QDGASEGGGMSSSEDF--EKRSPRDFALWKAYKPQDGDVSWTTSLGKGRPGWHIECSAMIREFFGDSVDLHAGGIDLVFPHHENEIAQSEAVTGKQFCRHWVHNGFVNVNNEKMSKSKGNFLTLRGTFKTPLEVRAFRYFVVTSQYRMPLNFSPEALAASKSALQRLDRFRTAVFEAAVSLGPASS--EDAPSPEIQALVESCLDNLQVAMNDDLNTPRAS 371
BLAST of mRNA_L-elsbetiae_contig19368.5738.1 vs. uniprot
Match: A0A7S0Y3N2_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0Y3N2_HEMAN) HSP 1 Score: 262 bits (669), Expect = 2.330e-84 Identity = 125/215 (58.14%), Postives = 158/215 (73.49%), Query Frame = 1 Query: 22 GGISDATEFGSEKENAKDFALWKAYKPEDGDVFWETPIGKGRPGWHIECSAMARRFLGDTVDVHAGGIDLVFPHHENEVAQSEGFTGKPFCSCWVHNAFVNVDGEKMSKSKGNFLTLSGTLPTALDVRGFRYLVVSSQYRTTLGFSSKSLEGAKNTVKRLDKLRVALLEAAAASGEAEGAGEGEVSPALLEVVPKSLEGFDAGMNDDLNTPR-CA 663 GGI+D G EK A+DFALWKA+K +DGDV+WET +GKGRPGWHIECSAMARRFLG+++D+HAGG+DL FPHHENE+AQSE F G + W+HN FVN+D EKMSKS GNFLT+ L +A D R FRY+V++S YR +L F+ + L+G++NT+KRLDK R L+E +A GEG+VS + + K LE F + DDLNTPR CA Sbjct: 1 GGITDPEAEGVEKRGARDFALWKAFKEDDGDVYWETSLGKGRPGWHIECSAMARRFLGESIDIHAGGVDLTFPHHENEIAQSECFCGCKMSNVWMHNGFVNIDNEKMSKSLGNFLTIRDVLKSADDCRAFRYMVIASSYRQSLNFTPEVLQGSRNTIKRLDKWRQKLIEVSAE-------GEGDVSEDVQKAADKCLEQFAVALRDDLNTPRACA 208
BLAST of mRNA_L-elsbetiae_contig19368.5738.1 vs. uniprot
Match: A0A7S0EPZ0_9CRYP (Cysteine--tRNA ligase (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EPZ0_9CRYP) HSP 1 Score: 265 bits (678), Expect = 8.260e-84 Identity = 135/221 (61.09%), Postives = 160/221 (72.40%), Query Frame = 1 Query: 4 DGAGEGGGISDATEFGSEKENAKDFALWKAYKPEDGDVFWETPIGKGRPGWHIECSAMARRFLGDTVDVHAGGIDLVFPHHENEVAQSEGFTGKPFCSCWVHNAFVNVDGEKMSKSKGNFLTLSGTLPTALDVRGFRYLVVSSQYRTTLGFSSKSLEGAKNTVKRLDKLRVALLEAAAASGEAEGAGEGEVSPALLEVVPKSLEGFDAGMNDDLNTPR-CA 663 DGA EGGGI+D F EK+++KDFALWKAYKPEDG+V WET + KGRPGWHIECSAM+RR+LGD+ D+HAGG+DL FPHHENE+AQSE + G +C WVHN FVN++ EKMSKS GNFLTL D R FRYLVVSSQYR L F+ L+GA+NT+KRLDK R LLE +A SG GE ++ E+ K F+ GM DDLNTPR CA Sbjct: 258 DGASEGGGITDREGF--EKKSSKDFALWKAYKPEDGEVAWETKLSKGRPGWHIECSAMSRRYLGDSFDIHAGGVDLTFPHHENEIAQSEAYCGCQYCRYWVHNGFVNINNEKMSKSLGNFLTLREAFKDPNDCRAFRYLVVSSQYRAALNFAPDVLQGARNTLKRLDKWRNRLLEVSAESG-------GE---SIAEMASKCRRDFEQGMMDDLNTPRACA 466
BLAST of mRNA_L-elsbetiae_contig19368.5738.1 vs. uniprot
Match: A0A7S4UT40_GUITH (Cysteine--tRNA ligase n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4UT40_GUITH) HSP 1 Score: 263 bits (671), Expect = 3.200e-81 Identity = 132/221 (59.73%), Postives = 157/221 (71.04%), Query Frame = 1 Query: 4 DGAGEGGGISDATEFGSEKENAKDFALWKAYKPEDGDVFWETPIGKGRPGWHIECSAMARRFLGDTVDVHAGGIDLVFPHHENEVAQSEGFTGKPFCSCWVHNAFVNVDGEKMSKSKGNFLTLSGTLPTALDVRGFRYLVVSSQYRTTLGFSSKSLEGAKNTVKRLDKLRVALLEAAAASGEAEGAGEGEVSPALLEVVPKSLEGFDAGMNDDLNTPR-CA 663 DGA EGGGI+D F EK+++KDFALWKAYKPEDG+V WET + KGRPGWHIECSAM+RR+LGD+ D+HAGG+DL FPHHENE+AQSE + G +C WVHN FVN++ EKMSKS GNFLTL D R FRYLVVSSQYR L F+ L+GA+NT+KRLDK R LLE + SG ++ E+ K F+ GM DDLNTPR CA Sbjct: 292 DGASEGGGITDREGF--EKKSSKDFALWKAYKPEDGEVTWETKLSKGRPGWHIECSAMSRRYLGDSFDIHAGGVDLTFPHHENEIAQSEAYCGCQYCRYWVHNGFVNINNEKMSKSLGNFLTLREAFKDPNDCRAFRYLVVSSQYRAALNFAPDVLQGARNTLKRLDKWRNRLLEVSMESG----------GQSIEEMAKKCRSDFEQGMMDDLNTPRACA 500
BLAST of mRNA_L-elsbetiae_contig19368.5738.1 vs. uniprot
Match: L1I7X3_GUITC (Cysteine--tRNA ligase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I7X3_GUITC) HSP 1 Score: 257 bits (657), Expect = 4.890e-81 Identity = 132/223 (59.19%), Postives = 155/223 (69.51%), Query Frame = 1 Query: 4 DGAGEGGGISDATEFGSEKENAKDFALWKAYKPEDGDVFWETPIGKGRPGWHIECSAMARRFLGDTVDVHAGGIDLVFPHHENEVAQSEGFTGKPFCSCWVHNAFVNVDGEKMSKSKGNFLTLSGTLPTALDVRGFRYLVVSSQYRTTLGFSSKSLEGAKNTVKRLDKLRVALLEAAAASGEAEGAGEGEVSPAL--LEVVPKSLEGFDAGMNDDLNTPR-CA 663 DGA EGGGI+D F EK+++KDFALWKAYKPEDG+V WET + KGRPGWHIECSAM+RR+LGD+ D+HAGG+DL FPHHENE+AQSE + G +C WVHN FVN++ EKMSKS GNFLTL D R FRYLVVSSQYR L F+ L+GA+NT+KRLDK R EAA + E E L+V + D GM DDLNTPR CA Sbjct: 186 DGASEGGGITDREGF--EKKSSKDFALWKAYKPEDGEVTWETKLSKGRPGWHIECSAMSRRYLGDSFDIHAGGVDLTFPHHENEIAQSEAYCGCQYCRYWVHNGFVNINNEKMSKSLGNFLTLREAFKDPNDCRAFRYLVVSSQYRAALNFAPDVLQGARNTLKRLDKRRREKEEAAEGGRWEDNRMEEEAEERAESLQVEKSAARSLDGGMMDDLNTPRACA 406
BLAST of mRNA_L-elsbetiae_contig19368.5738.1 vs. uniprot
Match: A0A7S1ZX31_TRICV (Cysteine--tRNA ligase (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZX31_TRICV) HSP 1 Score: 254 bits (648), Expect = 8.330e-78 Identity = 121/209 (57.89%), Postives = 150/209 (71.77%), Query Frame = 1 Query: 43 EFGSEKENAKDFALWKAYKPE--DGDVFWETPIGKGRPGWHIECSAMARRFLGDTVDVHAGGIDLVFPHHENEVAQSEGFTGKPFCSCWVHNAFVNVDGEKMSKSKGNFLTLSGTLPTALDVRGFRYLVVSSQYRTTLGFSSKSLEGAKNTVKRLDKLRVALLEAAAASGEAEGAGEGEVSPALLEVVPKSLEGFDAGMNDDLNTPRCA 663 E+ ++KE +DFALWKAYKP+ D W+T IG+GRPGWH+ECSAMAR++LGD++DVH GGIDL FPHHENE+AQSEG TGKPFC+CW+HN FVN+ EKMSKSKGNFLTL P + DVR +RYLVVSS YR L F+ ++ AK +KR+D++R + EA EG GE S + E V K L FDA + DDL+ PR A Sbjct: 275 EYDADKEGIRDFALWKAYKPDFDRDDAVWDTAIGRGRPGWHLECSAMARKYLGDSIDVHCGGIDLKFPHHENEIAQSEGATGKPFCACWLHNGFVNIGDEKMSKSKGNFLTLRTACPKSDDVRAYRYLVVSSHYRNPLSFTEAAVGAAKGALKRMDRVREMIGEALEGEESPEG---GEGSGPIAEAVKKELSNFDAAIADDLSMPRAA 480 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19368.5738.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig19368.5738.1 >prot_L-elsbetiae_contig19368.5738.1 ID=prot_L-elsbetiae_contig19368.5738.1|Name=mRNA_L-elsbetiae_contig19368.5738.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=221bp QDGAGEGGGISDATEFGSEKENAKDFALWKAYKPEDGDVFWETPIGKGRPback to top mRNA from alignment at L-elsbetiae_contig19368:447..2478- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig19368.5738.1 ID=mRNA_L-elsbetiae_contig19368.5738.1|Name=mRNA_L-elsbetiae_contig19368.5738.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2032bp|location=Sequence derived from alignment at L-elsbetiae_contig19368:447..2478- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig19368:447..2478- >mRNA_L-elsbetiae_contig19368.5738.1 ID=mRNA_L-elsbetiae_contig19368.5738.1|Name=mRNA_L-elsbetiae_contig19368.5738.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1326bp|location=Sequence derived from alignment at L-elsbetiae_contig19368:447..2478- (Laminarionema elsbetiae ELsaHSoW15)back to top |