mRNA_L-elsbetiae_contig19302.5716.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig19302.5716.1 vs. uniprot
Match: A0A6H5K2F3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2F3_9PHAE) HSP 1 Score: 287 bits (734), Expect = 8.130e-91 Identity = 129/170 (75.88%), Postives = 147/170 (86.47%), Query Frame = 1 Query: 46 ATTVAVPIADERTCPYAIDSEEEAFFRIKDTSLPGNVVKVEHLTFCRTGNHFISFSRNLALGYCCKSKVVWLPPKDNVLAPGIFNEGTPGPRWFDFSSAPDMPGFDSSTCATDITWAGQRAFHMNQLETPDHEYHIPGLLQCVHRAPRLLGCEAAYYFPKDMDVCSAGAA 555 A + A ++ E CPY ID+ EEA RIKD SLPGNVVKVEHLTFCRTGNHF SF RNLALGYCCKSKVVWLPPKD+VLAPG+FN+GTPGPRWFDFSSAPD+ GFDSS C+ DITWAGQRAFHM+QL++P+HE+H PGL +C+ RAPRLL CEAAYYFPKD+D+C A AA Sbjct: 81 AASAAPGVSLEGGCPYVIDTAEEAISRIKDKSLPGNVVKVEHLTFCRTGNHFSSFFRNLALGYCCKSKVVWLPPKDDVLAPGVFNQGTPGPRWFDFSSAPDVDGFDSSACSADITWAGQRAFHMHQLDSPEHEFHTPGLKECIARAPRLLACEAAYYFPKDVDLCHATAA 250
BLAST of mRNA_L-elsbetiae_contig19302.5716.1 vs. uniprot
Match: D7G610_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G610_ECTSI) HSP 1 Score: 201 bits (510), Expect = 1.070e-58 Identity = 92/159 (57.86%), Postives = 113/159 (71.07%), Query Frame = 1 Query: 85 CPYAIDSEEEAFFRIKDTSLPGNVVKVEHLTFCRTGNHFISFSRNLALGYCCKSKVVWLPPKDNVLAPGIFNEGTPGPRWFDFSSAPDMPGFDSSTCATDITWAGQRAFHMNQLETPDHEYHIPGLLQCVHRAPRLLGCEAAYYFPKDMDVCSAGAAPL 561 C YAI + + A + D+++ GNVVKV HL F RTGN F++ RNLALGYCCK+K VWLPPKD+VLAPGIFNEGTPGPRWFDFSSAPD+ G D C DI W + A M L+ P+ ++P + C+ +APRLLGCEAAYYFP+D+ VC P Sbjct: 59 CTYAIPNAKVARKQRHDSTIEGNVVKVTHLQFGRTGNRFMAVYRNLALGYCCKAKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDVDGVDLGRCPIDIIWENRGAMQMAGLDNPERNKYLPHIRDCMAKAPRLLGCEAAYYFPQDIAVCPRKKKPF 217
BLAST of mRNA_L-elsbetiae_contig19302.5716.1 vs. uniprot
Match: A0A6H5K7B3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7B3_9PHAE) HSP 1 Score: 204 bits (518), Expect = 1.550e-58 Identity = 123/240 (51.25%), Postives = 149/240 (62.08%), Query Frame = 1 Query: 82 TCPYAIDSEEEAFFRIKDTSLPGNVVKVEHLTFCRTGNHFISFSRNLALGYCCKSKVVWLPPKDNVLAPGIFNEGTPGPRWFDFSSAPDMPGFDSSTCATDITWAGQRAFHMNQLETPDHEYHIPGLLQCVHRAPRLLGCEAAYYFPKDM--DVC-----------SAGAAPLTPRPKDQEEGEAQLGSGGRRDELERRKIAEATPGVEGQGKGXXXXXXXXXXXXXGTLVLHVRSGDIF 762 +CPYAI SEEEA R +TS PGNVV V +CR GN F S SR+L+LGYCCKS+++ LPPKD LAPG FNEG PGPR FDFSSAPD+ GFD S+C +ITW G AFH+ L H Y+ P L +C+ PR+ GCEAAY+FPKDM D+C ++ ++ +P+D G R D ER + EAT XXXXXXXXX G LV+HVRSGDIF Sbjct: 146 SCPYAIPSEEEARERSGNTSAPGNVVVVTDFNYCRLGNRFTSMSRSLSLGYCCKSRLLSLPPKDEQLAPGRFNEGIPGPRNFDFSSAPDVEGFDYSSCPPEITWGGTNAFHLQGLRDEGHPYYTPELFECIKELPRIAGCEAAYFFPKDMAVDMCPLDETAERDHNNSNVRDVSEKPRDDAPGV-------RLDWGERGQGREATXXXXXXXX-XXXXXXXXXEGSAGNLVVHVRSGDIF 377
BLAST of mRNA_L-elsbetiae_contig19302.5716.1 vs. uniprot
Match: D7G1L4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L4_ECTSI) HSP 1 Score: 202 bits (514), Expect = 5.450e-58 Identity = 128/262 (48.85%), Postives = 160/262 (61.07%), Query Frame = 1 Query: 61 VPIAD-ERTCPYAIDSEEEAFFRIK------DTSLPGNVVKVEHLTFCRTGNHFISFSRNLALGYCCKSKVVWLPPKDNVLAPGIFNEGTPGPRWFDFSSAPDMPGFDSSTCATDITWAGQRAFHMNQLETPDHEYHIPGLLQCVHRAPRLLGCEAAYYFPKDMDVCSAGAAPLTPRPKDQEEGEAQLGSGGRRDELERRKIAEATPGVE------GQGK-----GXXXXXXXXXXXXXGTLVLHVRSGDIFDNAVLAYYGQ 792 +PIA +CPYAI +EEE R +TS PGNVV V +CR GN F+S R+L+LGYCCKS++V LPPKD+ LAPG FN+GTPGPR FDFSSAPD+ GFDSS+C +I W G +AFH+ L H Y+ PGL C+ P ++GCEAAY+FP DM A P+ P + E G + RD E+ K + PG++ G G+ XXXXXXXXXX G LV+HVRSGDIF + YGQ Sbjct: 137 LPIAPFSSSCPYAILAEEEGHERSDRGGDGGNTSAPGNVVVVTDFNYCRLGNRFLSMGRSLSLGYCCKSRLVSLPPKDDQLAPGRFNDGTPGPRNFDFSSAPDVEGFDSSSCPPEIKWGGTQAFHLEGLRDEGHPYYTPGLFTCIKELPWIIGCEAAYFFPTDM------AVPMCPLDETAEGGNKNV-----RDISEKPK--DDAPGIQLDWEESGHGREATEQXXXXXXXXXXXGSAGNLVMHVRSGDIFVSPAHPGYGQ 385
BLAST of mRNA_L-elsbetiae_contig19302.5716.1 vs. uniprot
Match: D7G2M2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2M2_ECTSI) HSP 1 Score: 201 bits (512), Expect = 7.000e-58 Identity = 107/236 (45.34%), Postives = 136/236 (57.63%), Query Frame = 1 Query: 85 CPYAIDSEEEAFFRIKDTSLPGNVVKVEHLTFCRTGNHFISFSRNLALGYCCKSKVVWLPPKDNVLAPGIFNEGTPGPRWFDFSSAPDMPGFDSSTCATDITWAGQRAFHMNQLETPDHEYHIPGLLQCVHRAPRLLGCEAAYYFPKDMDVCSAGAAPLTPRPKDQEEGEAQLGSGGRRDELERRKIAEATPGVEGQGKGXXXXXXXXXXXXXGTLVLHVRSGDIFDNAVLAYYGQ 792 CPY + + E R++D ++PGNV+ + F R GN F + NL LGYCCKSK+V LP KD+ LAPGIF EGTPGPRW+DF++APD+ GFD+S+C DITW G+ AFH+ L+ P H Y+ P L CV PRL GCEAAY+FP +DVC L+ R + Q G+G + PGV K TLV+HVRSGDIF + YGQ Sbjct: 124 CPYILRTPGERL-RMRDPAIPGNVLTINDFRFGRLGNRFWALGVNLKLGYCCKSKLVSLPAKDDTLAPGIFGEGTPGPRWYDFTNAPDVEGFDASSCPADITWGGREAFHLLGLDNPSHPYYSPNLSTCVETVPRLTGCEAAYFFPMGVDVC------LSDRTATGDVVHEQRGNGA---------SGRSGPGV----KKNLVGSEEEEGRPANTLVIHVRSGDIFVDPAAPGYGQ 339
BLAST of mRNA_L-elsbetiae_contig19302.5716.1 vs. uniprot
Match: D7FRV9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV9_ECTSI) HSP 1 Score: 67.4 bits (163), Expect = 3.660e-9 Identity = 49/151 (32.45%), Postives = 71/151 (47.02%), Query Frame = 1 Query: 85 CPYAIDSEEEAFFRIKDTSLPGNVVKVEHLTFCRTGNHFISFSRNLALGYCCKSKVVWLPPKDNVLAPGIFNEG--TPGPRWFDFSSA-PDMPGFDS-----STCATDITWAGQRAFHMNQLETPDHEYHIPGLLQCVHRAPRLLGCEAAY 513 CP A+ S +A + + N + + R+GNHF+ S LA+G+CC+S+++ LP D + PG G G RWFDFS P PGF+ C + AF +E+ LL+C++R L GCE AY Sbjct: 89 CPQAL-SRSQAEAALDGGNSTSNTITLLSFGSGRSGNHFLMISSYLAMGFCCRSRLLTLPEVDTAM-PGDDEGGGFKAGERWFDFSRVTPPWPGFEQLGDNPEVCRPQMEDGADNAF--------GYEHIHSRLLRCMNRV-YLRGCEKAY 228
BLAST of mRNA_L-elsbetiae_contig19302.5716.1 vs. uniprot
Match: A0A6H5L7B0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7B0_9PHAE) HSP 1 Score: 63.9 bits (154), Expect = 5.110e-8 Identity = 77/258 (29.84%), Postives = 108/258 (41.86%), Query Frame = 1 Query: 67 IADERTCPYAIDSEEEAFFRIKDTSLPGNVVKVEHLT-FCRTGNHFISFSRNLALGYCCKSKVVWLPPKDNVLAPGIFNEGTPGPRWFDFSS-----APDMPGFDSSTCATDITWAGQR--AFHMNQLETPDHEYHIPGL---LQCVHRAPRLLGCEAAYYFPKDMDVCSAGAAPLTPRPKDQ----EEGEAQLGSGGRRDELERRKIAEATPGVEGQGKGXXXXXXXXXXXXXGTLVLHVRSGDIFDNAVLAY-YGQ 792 + +R CP AI S +EA R PG V+ + + R+GNH+++ S ++ +CC+ KV+ LP D L F FS AP P + + + TD R +L H HI GL LQ R ++ GCEAAY K+ S G P P+ Q E+ AQL +A T +E +G G +LV+HVRSGDIF + + YGQ Sbjct: 42 VVQDRGCPQAI-SPDEADIRRSTRGWPGGVLTLSSIERIGRSGNHYMAISTLFSMAFCCQVKVLELPDMDWRLPTESGERFKSSTNLFSFSQRHTNRAP--PQYINGSLPTDFEGLQGRLDVCPHERLIDGTHANHIRGLHPHLQKCMRNVKMRGCEAAYL--KE----SLGGEHACPSPQRQLAEREDESAQL-------------VAGTTSPLERRGAG--------------SLVVHVRSGDIFKPGTIYHQYGQ 263 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19302.5716.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig19302.5716.1 >prot_L-elsbetiae_contig19302.5716.1 ID=prot_L-elsbetiae_contig19302.5716.1|Name=mRNA_L-elsbetiae_contig19302.5716.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=264bp AAGEGGARVEHERAEATTVAVPIADERTCPYAIDSEEEAFFRIKDTSLPGback to top mRNA from alignment at L-elsbetiae_contig19302:3..2313+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig19302.5716.1 ID=mRNA_L-elsbetiae_contig19302.5716.1|Name=mRNA_L-elsbetiae_contig19302.5716.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2311bp|location=Sequence derived from alignment at L-elsbetiae_contig19302:3..2313+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig19302:3..2313+ >mRNA_L-elsbetiae_contig19302.5716.1 ID=mRNA_L-elsbetiae_contig19302.5716.1|Name=mRNA_L-elsbetiae_contig19302.5716.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1584bp|location=Sequence derived from alignment at L-elsbetiae_contig19302:3..2313+ (Laminarionema elsbetiae ELsaHSoW15)back to top |