mRNA_L-elsbetiae_contig193.5714.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig193.5714.1 vs. uniprot
Match: D7FK07_ECTSI (Calmodulin-binding WW domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK07_ECTSI) HSP 1 Score: 2231 bits (5781), Expect = 0.000e+0 Identity = 1325/1951 (67.91%), Postives = 1465/1951 (75.09%), Query Frame = 1 Query: 1 QVMDEHRRVMLAVATSLYDLLQHLAELGPAARTVQRAYRSHTGRSLLALSRHKLALKRHNDRYMWERGTNHVKAEWERARKLEAEEQQRQYEEWLRQEEKRHVEEELYRWGVLRYGWREEDLEGVPGVKVYRFYRKVRAKRDASEVGHKGPDMVDALQEESEAYPLYRYEDEMAARKLVRAGRAYIARRVMYILRRNKLRLEKDRMERLEWERAERIADQHLTVRLPLVTVSAKRYFHATADELNDDPYIEGEYEPPSDDHLELWVGFLLDARTPARPSKSSATGRERKGNNKRPSAAVGANAPSGSGSSTMSSQQHSAARGSGGSGGKWRGP-GEGWMRGEVFLVNPSEVVSAEGVKKYPKGTFGIRYLDTGEEIPDVPRDCIRVLTLTPGMKVEARYGGGLDFYPGTIDGINSRNGYALSYSVKYEDGDIEKVVKRGHIAPFPEEVAALDAVTAEATRKAAVRRDRAKFLQRRRAVIASAWRERVQKAEDDYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPA---RRGVGTSAKXXXXXXXXXXXXXXXXXXXXXXXXA--DTDAMACIGMIEAAARLSAENRPRVAVALKIDYTRQATRFGCSQVQTASGVLWKSEVTGTHTRGRPRYTFEEAGAARKIQAAWAGLQGRRAFREQLAKQSIRGLGIACINEASSHAWIGHEEEGLSLEMWLLRAGVPPPDARKVAAGATKVLAQLAASRGGGAGGARVRAGGGFGKGAGNRRTQSSSISCSTFRNWLGGXXXXXXXXXXXXXXXXXRPGAGVXXXXXXXXXXXXXXXXXAGDAKLLKLGLESATDRRRVMAVVLREEGTPSCINWFEGTDDHRTVSSVIAGGEAQAFKLIWKAFPGNQSRAESMAKSVAASNNPVTRMQITAWLKRHDGRPGVAQSTISEQIIDVPITSSRDAEAAAYEVYRLFCQRLSVLASNMRVKGLWSAIAQASAKADGILAIYAAAAFGDSNESDRAEKDGASAKAVPSSSSTKQSRKTANSRXXXXXXXXXXXGKKEKGKSRSMQALRGKLVDGSGATEDATPSTWAHARAAQVLRTEAVSIALRWVAGAKAIQVAFRAFRCRRSYRALLVRRGRAATIVQSAERRKRAFMAAEDLREQRASRWEQLRDEESGRLYFYFK-------DTGEAFWEPPGVPFRPIIRDRMSGALVQAWPQLERELLEAAGAAPGFCMQCKTERATRVCDQCTFDRRRNLSWGGGRSHLCFVCFAERHADTPELTGHTFTAVETAGSVELLCSLCDRPASRRCRGLELPERALIVAARMLHNARLSGLLE-SADSGAKPMPLTLSDIANN-PNGAVAKVSSLNRPGAAAAGASTALVKIADGAGGGQGKAQRKQRKPGDPPVTREEFERVLAVCCLPYSLTWADAAYELCMGEVGAKRELGAAAAXXXXXXXXXXXXXXXKGKAKNKKRKITRTREEFWAAFGAALVNAREDCDDLMCGECWESVHKRGVRASHRWEGFRPGSPACVACSRSPAERKCNPXXXXXXXXXXXXXXXXXXXXXXXXQSCLEEPLQLPRCHECHRRVGDNRCGDCKVDLCDSCQAFQHASTCSHA-EEGEKVTS---GGNTGKHPLTRAQSSGAVGCGGKLSRGNKRQQKEAEEVFAALTLDGIEASLKGDARTLYALDRILGVEEDFPGGTKVDGSSSGKKNEGVKVDAEAEVEKTDEEEKE----------EEMPLICDVCGKTPDVECEQCGTVYCSNIWVGNPGCFVRDHERGNRRMHTKRRYTHARDLLKREERLAKEXXXXXXXXXXXXXXXXGKEKAENKRRLRLAHEYELARELRLQKEAKKELKRRIRRRRARVAGLNPSLLPKLRLKATEFAKRRGFFLAQHPSFLLLRVPPAIATTARRLVGTLRGVRRTGDKDD----GPERDGGRLITGAARTRSRXXXXSPTKGRKRQK 5754 +VMDEHRR M+AVATSLYD+LQHL ELG A++ V+RAYRSH GRSLLALSRH+LALKRH D Y+ ERGTNHVK EWERARK EAEEQQRQYEEWLRQEEKRHVEEELYRWGVLRYGWREEDLEGVPGVKVYR Y++V+AK DA+EVG +GPDMVD LQEESE YPLYRYEDEMAARKLVRAGRAYIARRV+YILRR+K+RLEK+R+ER+EWERAERIADQH+T RLPLVTVSAKRYFHAT DELNDDPYIEGE+EPPSDDHL LWVGFL+DARTPARPSK+ +TGR RKGNN +SQ S RG G SGG+WRGP GEGWMRGEVFLVNP+EVVSAEGVK+YPKGTFGIRYLDTGEEIPDVPRDCIR LTLTPGMKVEARYGGGLD+YPG I+G+N+RNG ALSYSVKYEDGD EKVVKRGHIAPFPEEVAALDAV AE KAAVRRDRAKFLQRRRAV+ASAWRERVQKAEDDYL XXXXXXXXXXXXXXXXXXXXXXXX A RR G K D DA+ACIGMIEAA RL E RPRVAVALKIDYTRQATRFGCSQVQT++G+LWKS VT TRGRPRYTFEE+ A RK+QAAWAG GRRAFR+QLAKQSIRGL + CINEASSHAWIGHEEEGL++EMWLLRAGV PPDA +VAAGATK L+QLAASRGGG NRR Q SS+SCS FRNWLGG XXXXXXXXXXX XXXXXXXX AGDAKLLKLGLES DRRRVMAVV++EE PS INWFEG DH+TVS+ IA GEAQAFKL+WK FPGNQSRAESM+K VAAS PVTRMQ+TAWLKRHDGRPGVAQS++SEQ++DV +TSSR+AE+AAYEVYRLFCQRLS+LASNMR+ GL SAI A+AKADGILA +A AAF S D + +AK SSS K SR+ S G+K+ + ++QAL+GKL D G EDA TWAHARAA VLRTE VS+ALRWV+ AKAIQVAFR FRCR SYRALL RR RAAT++QSAERRKRA A DLREQRAS WEQL D+E+GRLYF+FK DTGE++W+PP PFRP+IRDR+SGALVQAWPQLERELLEA GAAPG+CMQCKTE+ATRVCDQCTF R+ +WGGG+ HLCFVCFAERHADTPELT HTFT V T GS EL CSLCDRPASRRCRGLELPERAL+VAARML NARL+ +LE +A G P P + S + PN K R+ GDPPV+REEFER+LAVC LPYSLTWADA YELC GEVG + E+ A +GKAK KKRK+ RT E+FWAAFGAALV+A +DCDDL+CGECWESVHKRGVRASHRWEGFR GSPACVAC RSPAERKCN XXXXXXXXXXXXXXXXXXXXXXXX++CLEEPL+LPRC ECHRRVGD RC C+VDLCDSCQAF HA TC HA EEG K +S G ++GKH RA SSGAVGCGG+ KRQ++E +E+FA+LTL+G E LKGD RTLYALDRILGV ED T +EMPL+CDVCGKTPDVECE+CGTVYCSN WVGNPGCF+RDHERGNRR HTKR YTHA+DLLKR +R XXXXXXXXXX EKA KRRL+LA E ELAR +AR AGLNPSLLP+LR+KATEFA +RGFFL+QHP+FL +R+PP IA T RRLV LRG R + D G + G R GAAR RS XXXX P K R R++ Sbjct: 2069 EVMDEHRRAMMAVATSLYDILQHLTELGHASKIVRRAYRSHAGRSLLALSRHELALKRHYDGYLLERGTNHVKVEWERARKAEAEEQQRQYEEWLRQEEKRHVEEELYRWGVLRYGWREEDLEGVPGVKVYRLYKRVQAKWDAAEVGPRGPDMVDMLQEESEVYPLYRYEDEMAARKLVRAGRAYIARRVLYILRRDKMRLEKERLERIEWERAERIADQHVTARLPLVTVSAKRYFHATPDELNDDPYIEGEFEPPSDDHLSLWVGFLVDARTPARPSKTGSTGRGRKGNNNXXXXXXXXXXXXXXXXXXRASQATSPTRGEGASGGQWRGPAGEGWMRGEVFLVNPTEVVSAEGVKRYPKGTFGIRYLDTGEEIPDVPRDCIRALTLTPGMKVEARYGGGLDYYPGVIEGVNTRNGLALSYSVKYEDGDTEKVVKRGHIAPFPEEVAALDAVAAELRGKAAVRRDRAKFLQRRRAVVASAWRERVQKAEDDYLAXXXXXXXXXXXXXXXXXXXXXXXXGHHFASAAVAARRVGGAKGKRGSTGVRGGVRAGNGRGGSGRDVSGGGDVDALACIGMIEAAERLHTETRPRVAVALKIDYTRQATRFGCSQVQTSAGLLWKSNVTKAFTRGRPRYTFEESAAMRKVQAAWAGFMGRRAFRDQLAKQSIRGLAMVCINEASSHAWIGHEEEGLTIEMWLLRAGVSPPDAHRVAAGATKALSQLAASRGGGXXXXXXXXXXXXXXXXXNRRAQPSSVSCSAFRNWLGGSSRGVAXXXXXXXXXXXXX-------XXXXXXXXGVASGAAGDAKLLKLGLESTVDRRRVMAVVMKEEPNPSLINWFEGPTDHKTVSAAIAAGEAQAFKLVWKTFPGNQSRAESMSKRVAASKYPVTRMQLTAWLKRHDGRPGVAQSSMSEQLVDVAVTSSREAESAAYEVYRLFCQRLSILASNMRLTGLRSAITHAAAKADGILATHADAAFDGSK--DNTGEGNLAAKMGSSSSLLKGSRRKDGSSSVDAASGNSKDGRKQA--TAALQALKGKLGD-VGEAEDAASRTWAHARAALVLRTEGVSVALRWVSAAKAIQVAFRGFRCRSSYRALLARRRRAATMIQSAERRKRACATAADLREQRASPWEQLWDDENGRLYFFFKAYVPGAKDTGESYWDPPDEPFRPMIRDRLSGALVQAWPQLERELLEAVGAAPGYCMQCKTEKATRVCDQCTFGGRKKPAWGGGKYHLCFVCFAERHADTPELTSHTFTPVHTPGSGELTCSLCDRPASRRCRGLELPERALVVAARMLQNARLAAVLEGTAARGHPPHPSSSSSRSPGVPNXXXXXXXXXXX-----------XXXXXXXXXXXXXXXXNKTRRAGDPPVSREEFERILAVCDLPYSLTWADATYELCNGEVGVQGEVEAYGGYG-------------EGKAKEKKRKVLRTSEQFWAAFGAALVSAGDDCDDLLCGECWESVHKRGVRASHRWEGFRTGSPACVACRRSPAERKCNVXXXXXXXXXXXXXXXXXXXXXXXXRTCLEEPLELPRCSECHRRVGDRRCESCEVDLCDSCQAFTHARTCPHANEEGRKGSSTAGGDHSGKHAPKRASSSGAVGCGGRHPAVTKRQKRETDEIFASLTLEGTE--LKGDLRTLYALDRILGVVEDSSEDTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIDEMPLVCDVCGKTPDVECEECGTVYCSNTWVGNPGCFIRDHERGNRRKHTKRGYTHAKDLLKRAKRKXXXXXXXXXXXXXQNGEARRDEKANRKRRLKLAQERELARXXXXXXXXXXXXXXXXXXXKARAAGLNPSLLPRLRVKATEFASKRGFFLSQHPNFLSVRIPPGIAMTTRRLVDALRGHERAAGRRDIDTIGGDGRGRRSPKGAARDRSXXXXXXPAKKRHRKR 3981
BLAST of mRNA_L-elsbetiae_contig193.5714.1 vs. uniprot
Match: A0A6H5KMU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMU5_9PHAE) HSP 1 Score: 135 bits (340), Expect = 2.310e-33 Identity = 75/103 (72.82%), Postives = 83/103 (80.58%), Query Frame = 1 Query: 5083 MPLICDVCGKTPDVECEQCGTVYCSNIWVGNPGCFVRDHERGNRRMHTKRRYTHARDLLKREERLAKEXXXXXXXXXXXXXXXXGKEKAENKRRLRLAHEYEL 5391 MPL+CDVCGKTPDVECE+CGTVYCSN WVGNPGCF+RDHERGNRR HTKR YTHA+DLLKR + XXXXXXXXXX EKA+ KRRL+LA E E+ Sbjct: 1 MPLVCDVCGKTPDVECEECGTVYCSNTWVGNPGCFIRDHERGNRRKHTKRGYTHAKDLLKRAKXXXXXXXXXXXXXXXQNGEARRDEKADKKRRLKLAQEREV 103
BLAST of mRNA_L-elsbetiae_contig193.5714.1 vs. uniprot
Match: A0A7S2FUP0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FUP0_9STRA) HSP 1 Score: 127 bits (318), Expect = 1.290e-27 Identity = 100/364 (27.47%), Postives = 154/364 (42.31%), Query Frame = 1 Query: 1000 GEGWMRGEVFLVNPSEVVSAEGVKKYPKGTFGIRYLDTGEEIPDVPRDCIRVLTLTPGMKVEARYGGGLDFYPGTIDGINSRNGYALSYSVKYEDGDIEKVVKRGHIAPFPEEVAALDAVTAEATRKAAVRRDRAKFLQRRRAVIASAWRERVQKAEDDYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPARRGVGTSAKXXXXXXXXXXXXXXXXXXXXXXXXADTDAMACIGMIEAAARLSAENRPRVAVALKIDYTRQATRFGCSQVQTASGVLWKSEVTGTHTRGRPRYTFEEAGAARKIQAAWAGLQGRRAFREQLAKQSIRGLGIACINEASSHAWIGHEEEGLSLEMWLLRAGV 2091 G+ + G V+ VNP++ G+K YPKGTFG+ Y D G+ P VPR+ IR+ L GM+VEARYGG F+PGT+ G+NSR+G LSY + YEDG+ E+ KRG I E++ + + + +A+ R A+++ AE D + + V S K C+GM ++ E+ R + + +T T RP +T EE ++ IQAA + GR F+ +L +S+ + C+ A+ AW+G ++EGL+LE+WL R G+ Sbjct: 27 GQHYFSGSVYQVNPTQYYDGTGLKMYPKGTFGVMY-DDGDFEPAVPRNLIRIARLQVGMRVEARYGGHSAFFPGTVAGVNSRDGQVLSYEIAYEDGENERACKRGMIRLDEEQLVMFQETWQDLEDQRLISEAQAENATR-------AYKDMQAGAEKDL-----------------------ETMKLLRTGASGKSVDLSDKQELERLYDSTCPHIRLRLRIKY--------TCVGMRYGWKSMTTESTKRT--------------------------YYLNVLTKETTWTRPSFTLEEEVCSKIIQAAVRTMLGRLYFQRRLMGESLLEVVDTCVAAAAKDAWVGFKDEGLTLELWLNRMGL 325
BLAST of mRNA_L-elsbetiae_contig193.5714.1 vs. uniprot
Match: A0A7S4K1P9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K1P9_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 3.520e-13 Identity = 44/112 (39.29%), Postives = 61/112 (54.46%), Query Frame = 1 Query: 3373 EQRASRWEQLRDEESGRLYFYFKDTGEAFWEPPGVPFRPIIRDRMSGALVQAWPQLERELLEAAGAAPGFCMQCKTERATRVCDQCTFDRRRNLSWGGGRSHLCFVCFAERH 3708 +Q+AS EQL + +G Y++ K++GEA WE P P+RP+IR R L+QAWPQL+ +G C CKTE ATR C+ C + GG C +C+ H Sbjct: 24 QQQASSLEQLCSD-AGAFYWFDKESGEAVWEEPDKPYRPMIRVR--SGLIQAWPQLDLRNKPNSGIV--LCSTCKTEIATRACNICIEN--------GGSKAFCLLCYVTEH 122
BLAST of mRNA_L-elsbetiae_contig193.5714.1 vs. uniprot
Match: A0A6H5KAI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAI1_9PHAE) HSP 1 Score: 84.3 bits (207), Expect = 3.110e-12 Identity = 41/54 (75.93%), Postives = 49/54 (90.74%), Query Frame = 1 Query: 1 QVMDEHRRVMLAVATSLYDLLQHLAELGPAARTVQRAYRSHTGRSLLALSRHKL 162 +VMDEHRR M+AVATSLYD+LQHL ELG A++ V+RAYRSH GRSLLALSRH++ Sbjct: 1950 EVMDEHRRAMMAVATSLYDILQHLTELGHASKIVRRAYRSHAGRSLLALSRHEV 2003
BLAST of mRNA_L-elsbetiae_contig193.5714.1 vs. uniprot
Match: A0A482SRF5_9ARCH (WW domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SRF5_9ARCH) HSP 1 Score: 67.0 bits (162), Expect = 3.760e-7 Identity = 58/192 (30.21%), Postives = 82/192 (42.71%), Query Frame = 1 Query: 3346 AFMAAEDLREQRASRWEQLRDEESGRLYFYFKDTGEAFW-EPPGVPFRPIIRDRMSGALVQAWPQLER----------ELLEAAGAAPGF-CMQCKTERATRVCDQCTFD-RRRNLSWGGGRSHL-------CFVCFAERHADTPELTG----HTF--TAVETAGSVE--------LLCSLCDRPASRRCRG 3819 A+ A LR Q S WEQL D RLY+Y DT + + EPP +RP+IR++ S AL+QAWP L +EAA A+ C C + C C + + + + ++ C CF H ++ E H F A TA S+ L C +C A R+C+G Sbjct: 146 AYRKAGWLRRQLYSVWEQLWDNRYHRLYYYNIDTHYSQYDEPPDRVYRPLIREKHSAALMQAWPHLRDAATQANAPVLSAMEAANASKYLLCNICNQRACVKYCLDCHQEGESQQILHEDTKEYMVSRPVTYCLPCFVHEHPESNEEKAKHRSHVFEDAASPTAVSIGFDAVDRLYLKCCMCGESAIRKCQG 337
BLAST of mRNA_L-elsbetiae_contig193.5714.1 vs. uniprot
Match: A0A7S4MK78_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MK78_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 1.140e-6 Identity = 27/60 (45.00%), Postives = 41/60 (68.33%), Query Frame = 1 Query: 5116 PDVECEQCGTVYCSNIWVGNPGCFVRDHERGNRRMHTKRRYTHARDL---LKREERLAKE 5286 PDV C +CG VYCS W+GNPGCF + H RGNR H+ + + + ++ ++ EER+A++ Sbjct: 68 PDVRCRECGDVYCSITWLGNPGCFRQMHSRGNRTTHSAKPWPNVQNRVNEIREEERIAQD 127
BLAST of mRNA_L-elsbetiae_contig193.5714.1 vs. uniprot
Match: A0A7S2NUD7_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NUD7_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 4.980e-6 Identity = 25/47 (53.19%), Postives = 28/47 (59.57%), Query Frame = 1 Query: 5083 MPLICDVCGKTPDVECEQCGTVYCSNIWVGNPGCFVRDHERGNRRMH 5223 P C VC PD CE CG VYCS W+GNPGCF + H +G R H Sbjct: 660 FPPTCSVCANPPDKLCEDCGEVYCSATWIGNPGCFRKMHVKGERLHH 706
BLAST of mRNA_L-elsbetiae_contig193.5714.1 vs. uniprot
Match: A0A7S2CNG6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CNG6_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 1.820e-5 Identity = 26/46 (56.52%), Postives = 32/46 (69.57%), Query Frame = 1 Query: 5146 VYCSNIWVGNPGCFVRDHERGNRRMHTKRRYTHARDL---LKREER 5274 VYCS W+GNPGCF + H +GNRR HTK YT+ +L K+EER Sbjct: 72 VYCSVKWMGNPGCFAKQHRKGNRRTHTKEPYTYMEELEAVRKKEER 117 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig193.5714.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig193.5714.1 >prot_L-elsbetiae_contig193.5714.1 ID=prot_L-elsbetiae_contig193.5714.1|Name=mRNA_L-elsbetiae_contig193.5714.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1927bp MDEHRRVMLAVATSLYDLLQHLAELGPAARTVQRAYRSHTGRSLLALSRHback to top mRNA from alignment at L-elsbetiae_contig193:29534..51427- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig193.5714.1 ID=mRNA_L-elsbetiae_contig193.5714.1|Name=mRNA_L-elsbetiae_contig193.5714.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=21894bp|location=Sequence derived from alignment at L-elsbetiae_contig193:29534..51427- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig193:29534..51427- >mRNA_L-elsbetiae_contig193.5714.1 ID=mRNA_L-elsbetiae_contig193.5714.1|Name=mRNA_L-elsbetiae_contig193.5714.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=11562bp|location=Sequence derived from alignment at L-elsbetiae_contig193:29534..51427- (Laminarionema elsbetiae ELsaHSoW15)back to top |