mRNA_L-elsbetiae_contig1927.5703.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1927.5703.1
Unique NamemRNA_L-elsbetiae_contig1927.5703.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig1927.5703.1 vs. uniprot
Match: D7G0B3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B3_ECTSI)

HSP 1 Score: 423 bits (1087), Expect = 2.170e-147
Identity = 212/240 (88.33%), Postives = 225/240 (93.75%), Query Frame = 1 
Query:    1 SYKVPGQFVGIRLDGGGDGGVAGCLVAVSTEPLSVRQNGGTVQVLVTEEASFRLKGDTRGPAEEAKGRSLAALEKGDRVRISDFMGRGFASLFVGWIGLQSALQEQRDIVIVASGARGLGSVKPVLDWPPVQAHAGIKKVSVFLESESPDTAPFLDYFGGWRSSGIRVTQCFTDKTNENPVNVEAAIFSQGAGLAGAVGGDPGAASFLMAGLPGKRAMELTDRLTDHGVDPSRLLFNDFF 720
            +YKVPGQFVGIRLD GGD GVAGCLVAVSTEP  VRQ  G V+VLVTEE SFRLKGDTRGPAE+AKGRSLA+LE+GDRV+ISDFMGRGF+SLFVGWIGLQSALQEQRDIVIVASGARGLGSVKPVLDWPPVQAHAGIKKVSVFLESESP  APF++  GGWRSSGIRVTQC+T KTNENPV+VEAA+FS G+GLAGAVGG PGAASFLMAGLPGKRAMELTDRLTDHGVDPSRLLFNDFF
Sbjct:   46 NYKVPGQFVGIRLDEGGDNGVAGCLVAVSTEPTLVRQKNGNVEVLVTEEPSFRLKGDTRGPAEDAKGRSLASLEEGDRVKISDFMGRGFSSLFVGWIGLQSALQEQRDIVIVASGARGLGSVKPVLDWPPVQAHAGIKKVSVFLESESPAAAPFINESGGWRSSGIRVTQCYTAKTNENPVSVEAAMFSHGSGLAGAVGGHPGAASFLMAGLPGKRAMELTDRLTDHGVDPSRLLFNDFF 285
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BLAST of mRNA_L-elsbetiae_contig1927.5703.1 vs. uniprot
Match: A0A6H5JHC4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHC4_9PHAE)

HSP 1 Score: 414 bits (1064), Expect = 6.640e-141
Identity = 210/240 (87.50%), Postives = 223/240 (92.92%), Query Frame = 1 
Query:    1 SYKVPGQFVGIRLDGGGDGGVAGCLVAVSTEPLSVRQNGGTVQVLVTEEASFRLKGDTRGPAEEAKGRSLAALEKGDRVRISDFMGRGFASLFVGWIGLQSALQEQRDIVIVASGARGLGSVKPVLDWPPVQAHAGIKKVSVFLESESPDTAPFLDYFGGWRSSGIRVTQCFTDKTNENPVNVEAAIFSQGAGLAGAVGGDPGAASFLMAGLPGKRAMELTDRLTDHGVDPSRLLFNDFF 720
            +YKVPGQFVGIRLD GGD GVAGCLVAVSTEP  VRQ  G V+VLVTEE SFRLKGDTRGPAEEAKGRSLA+LE+GDRV+ISDFMGRGF+SLFVGWIGLQSALQEQRDIVIVASGARGLGSVKPVLDWPPVQAHAGIKKVSVFLE ESP  APF++  GGWRSSGIRVTQC+T KTNENPV+  AA+FS G+GLAGAVGG+PGAASFLMAGLPGKRAMELTDRLTDHGVDPSRLLFNDFF
Sbjct:  249 NYKVPGQFVGIRLDEGGDNGVAGCLVAVSTEPTLVRQKNGNVEVLVTEEPSFRLKGDTRGPAEEAKGRSLASLEEGDRVKISDFMGRGFSSLFVGWIGLQSALQEQRDIVIVASGARGLGSVKPVLDWPPVQAHAGIKKVSVFLEFESPAAAPFINESGGWRSSGIRVTQCYTAKTNENPVS--AAMFSHGSGLAGAVGGNPGAASFLMAGLPGKRAMELTDRLTDHGVDPSRLLFNDFF 486
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BLAST of mRNA_L-elsbetiae_contig1927.5703.1 vs. uniprot
Match: A0A0D2JAU4_9CHLO (FAD-binding FR-type domain-containing protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2JAU4_9CHLO)

HSP 1 Score: 128 bits (321), Expect = 6.750e-31
Identity = 88/271 (32.47%), Postives = 132/271 (48.71%), Query Frame = 1 
Query:    1 SYKVPGQFVGIRLDGGGD-----GGVAGC--LVAVSTEPLSVRQNGGTVQVLVTEEASFRLKGDTRGPAEEAKGRSLAALEKGDRVRISDFMGRGFASLFVGWIGLQSALQEQRDIVIVASGARGLGSVKPVLDWPPVQAHAGIKKVSVFLESESPDTAPFLDYFGGWRSSGIRVTQCFT-----DKTNENPVN-------------------VEAAIFSQGAGLAGAVGGDPGAASFLMAGLPGKRAMELTDRLTDHGVDPSRLLFNDFF 720
            SY +PGQ+VG+R  G         G+     L ++++ P   R++   +   V E     +  D R  A++A+    AAL  GD   +S  +GRGF SLF  +  L +AL+E+R+++++A GARG+ + +  L+W PV AHA   KV+    + SP TA FL  +  WR +G+     +T     D    +P                     +E  +F    GL GAVGG P   + L+AGL G  A  +   LT  G+   RLLF +FF
Sbjct:  123 SYTIPGQYVGLRFPGETTRAEEKSGIESARRLYSIASSPYDSRRDSAYLGASVIE-----VVVDRRWGADDAR---FAALAPGDTAEVSQLIGRGFCSLFSSYASLMAALEERRNLLLLAVGARGIAAARAALNWTPVLAHATQHKVTCLYVTRSPSTAAFLPEWDQWREAGVDFRPLYTESLLPDSPRASPAGAANGGADEADAGQEDVTGLLEQGLFLNVGGLEGAVGGRPSECTVLLAGLSGDVASAVAKELTFKGMLWERLLFCEFF 385
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BLAST of mRNA_L-elsbetiae_contig1927.5703.1 vs. uniprot
Match: A0A2V0NZ37_9CHLO (FAD-binding FR-type domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NZ37_9CHLO)

HSP 1 Score: 119 bits (297), Expect = 5.660e-28
Identity = 86/279 (30.82%), Postives = 131/279 (46.95%), Query Frame = 1 
Query:    7 KVPGQFVGIRLDGG-----GDGGVAGC--LVAVSTEPLSVRQNGGTVQVLVTEEASFRLKGDTRGPAEEAKGRSLAALEKGDRVRISDFMGRGFASLFVGWIGLQSALQEQRDIVIVASGARGLGSVKPVLDWPPVQAHAGIKKVSVFLESESPDTAPFLDYFGGWRSSGIRVTQCFTDKT--NENPVNVEAA--------------------------------IFSQGAGLAGAVGGDPGAASFLMAGLPGKRAMELTDRLTDHGVDPSRLLFNDFF 720
             V   +VG+R  G         GV G   L ++++ P   R++   +   V E     +  D  G A++A+    A+L  GD V +S  +GRGF SLF  +  L +AL+E+R+++++A GARG+ + +  L W PV AHA   KV+    + SP TA FL  +  WR +G+     +T+     ++P +  AA                                +F    GLAGAVGG P   + L+AGL G+ A  +   L   GV   R+LF +FF
Sbjct:   46 SVEDDYVGLRFPGERTPAEAASGVEGARRLYSIASSPYDSRRDSAYLSASVIE-----VVVDRTGGADDAR---FASLAPGDTVEVSQVIGRGFCSLFSSYASLMAALEERRNLLLLAVGARGVAAARATLTWTPVLAHATRHKVTCLYVTRSPSTAAFLPEWDQWRDAGVDFRPLYTESLLKGDSPESPRAAAAPXXXXXXXXXXXXXXEDAAQADIMALLEQGLFLNAGGLAGAVGGRPAETTVLLAGLSGEVASAVARELVFTGVQWERMLFCEFF 316
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BLAST of mRNA_L-elsbetiae_contig1927.5703.1 vs. uniprot
Match: A0A7J7QDP6_9CHLO (FAD-binding FR-type domain-containing protein n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A7J7QDP6_9CHLO)

HSP 1 Score: 120 bits (300), Expect = 6.820e-28
Identity = 87/273 (31.87%), Postives = 132/273 (48.35%), Query Frame = 1 
Query:    1 SYKVPGQFVGIRLDGGGD-GGVAGC--LVAVSTEPLSVRQNGGTVQVLVTEEASFRLKGDTRGPAEEAKGRSLAALEKGDRVRISDFMGRGFASLFVGWIGLQSALQEQRDIVIVASGARGLGSVKPVLDWPPVQAHAGIKKVSVFLESESPDTAPFLDYFGGWRSSGIRVTQCFTD-------KTNENPVN-----------------------VEAAIFSQGAGLAGAVGGDPGAASFLMAGLPGKRAMELTDRLTDHGVDPSRLLFNDFF 720
            S+ VPGQFVG+R     +  G+A    L  ++  P   R++   +   + E    +  G  +         +LA +  G  V +S  +GRGFASLF  + GL S+L+EQR+I+ +A G RG+ +++ VL W PVQAHA  +KVS F  ++SP +A FL  +  WR +GI     +T+       +  E+  N                       ++  +F    G+   +GG    A+ L+AGL G  A  +   LT  GV   RLLF D+F
Sbjct:  120 SFTVPGQFVGVRPPKQDETNGLADNQPLYTIACSPYESRRDSAYLGGSIIEVVVDKHNGGDQS--------TLADMAPGATVEVSQVVGRGFASLFNSYSGLPSSLEEQRNILAIAVGLRGIAAIRAVLSWAPVQAHATSRKVSCFYVTKSPSSAAFLAEWDQWREAGINFHPLYTESMLKGSAQDGEDAGNSSSGSXXXAAGDTAVTAADIMGLLDQGLFLHEHGIESVLGGRASDATVLLAGLRGDIASTVAKELTFKGVAWERLLFCDYF 384
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BLAST of mRNA_L-elsbetiae_contig1927.5703.1 vs. uniprot
Match: A0A8J4CV25_9CHLO (FAD-binding FR-type domain-containing protein n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4CV25_9CHLO)

HSP 1 Score: 118 bits (295), Expect = 4.680e-27
Identity = 82/275 (29.82%), Postives = 133/275 (48.36%), Query Frame = 1 
Query:    1 SYKVPGQFVGIRLDGGGDGGVAGC--LVAVSTEPLSVRQNGGTVQVLVTEEASFRLKGDTRGPAEEAKGRSLAALEKGDRVRISDFMGRGFASLFVGWIGLQSALQEQRDIVIVASGARGLGSVKPVLDWPPVQAHAGIKKVSVFLESESPDTAPFLDYFGGWRSSGIRVTQCFTDKT------------------NENPVN-------------VEAAIFSQGAGLAGAVGGDPGAASFLMAGLPGKRAMELTDRLTDHGVDPSRLLF--NDFF 720
            SY +PGQ VG+RL GG     +    L ++++ P + R++   V   + E    R    T GP E A    LA L  G +V ++  +GRGF+ L   + GL  AL+E R++V++A G +G+ +++  L+W PV A+A    ++    + SP  A F+  +  WR +G+R+   +T+ +                    +P +             ++ A+F+Q  G     GG     SFL+AGLPG  A  L  +L+  GV    +LF  +DFF
Sbjct:  138 SYTIPGQCVGLRLLGGPQSASSAPSRLFSIASSPYASRRDSAYVDASLIEVVVER----TAGPEEAA----LADLGPGAQVEVTQVIGRGFSPLLDSYNGLTHALEEGRNLVLIAMGTKGVAAIRSALNWQPVLAYASSHSLTALYLTHSPGKAAFVPEWDSWREAGMRLRPLYTNPSAGIDDDAIVSGNGSSSGGEGSPASPAVVLDHERCMELLQLALFAQEGGFEAVCGGPSSRCSFLLAGLPGDLASALAKQLSAKGVQYEHILFAQSDFF 404
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BLAST of mRNA_L-elsbetiae_contig1927.5703.1 vs. uniprot
Match: A0A5B8MSX6_9CHLO (Uncharacterized protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MSX6_9CHLO)

HSP 1 Score: 94.0 bits (232), Expect = 1.070e-18
Identity = 69/239 (28.87%), Postives = 116/239 (48.54%), Query Frame = 1 
Query:    4 YKVPGQFVGIRLDGGGDGGVAGCLVAVSTEPLSVRQNGGTVQVLVTEEASFRLKGDTRGPAEEAKGRSLAALEKGDRVRISDFMGRGFASLFVGWIGLQSALQEQRDIVIVASGARGLGSVKPVLDWPPVQAHAGIKKV-SVFLESESPDTAPFLDYFGGWRSSGIRVTQCFTDKTNENPVNVEAAIFSQGAGLAGAVGGDPGAASFLMAGLPGKRAMELTDRLTDHGVDPSRLLFNDF 717
            +  PGQ++ +R + G    V  CL   S+ P    +    +     E    R  G   G         L  +  G++   S+ +G+GF SLF     L  +L+E +D+++VASG  G+G ++ V+DW PVQA+AG   V ++    E+  +A F+D F  WR +G+ V  C  +  +     +E  IF Q   +  ++       SFL++G PGK   +L+  L  + +  +R+ + DF
Sbjct:   96 FNNPGQYIVVRNEEGKKERV--CL---SSTPYQAHKESAFLSASKVEILVDRNVGGILG---------LGDMAPGEQFESSNVLGKGFQSLFHDEDKLGLSLEEGKDLILVASGT-GIGPMRSVVDWAPVQAYAGNGHVVTLIYHMETLQSAAFVDDFESWREAGVHVRPCLGNDASV----IEGEIFDQKGQIRTSIVKPNSEPSFLVSGFPGKVTAKLSRLLAKNDIHGNRVFYCDF 315
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BLAST of mRNA_L-elsbetiae_contig1927.5703.1 vs. uniprot
Match: A0A836BUY6_9CHLO (FAD-binding FR-type domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BUY6_9CHLO)

HSP 1 Score: 90.1 bits (222), Expect = 6.750e-17
Identity = 54/175 (30.86%), Postives = 91/175 (52.00%), Query Frame = 1 
Query:    1 SYKVPGQFVGIRLDGGGDG--GVAGCLVAVSTEPLSVRQNGGTVQVLVTEEASFRLKGDTRGPAEEAKGRSLAALEKGDRVRISDFMGRGFASLFVGWIGLQSALQEQRDIVIVASGARGLGSVKPVLDWPPVQAHAGIKKVSVFLESESPDTAPFLDYFGGWRSSGIRVTQCFT 519
            SY +PGQ VG+RL   G         L A+++ P + R++   V   + E    R      G ++++    LA L  G ++ ++  +GRGF SL   + GL  AL++ R++V++A G RG+ + +  L+W PV AHA    V+    + S   A F+  +  WR +G+R+   +T
Sbjct:  132 SYTIPGQCVGVRLPAPGQEPHDPPRQLYAIASSPYASRRDSAYVDASLIEVVVER-----HGSSDDSV---LAELGPGSQLEVTQVIGRGFCSLLDSYNGLTHALEDGRNLVVIAMGDRGMAAARSALNWQPVLAHASSHSVAALYLAHSAGRASFVTDWDMWREAGMRLRPVYT 298
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BLAST of mRNA_L-elsbetiae_contig1927.5703.1 vs. uniprot
Match: D8UGT1_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UGT1_VOLCA)

HSP 1 Score: 84.7 bits (208), Expect = 5.100e-15
Identity = 51/173 (29.48%), Postives = 86/173 (49.71%), Query Frame = 1 
Query:    1 SYKVPGQFVGIRLDGGGDGGVAGCLVAVSTEPLSVRQNGGTVQVLVTEEASFRLKGDTRGPAEEAKGRSLAALEKGDRVRISDFMGRGFASLFVGWIGLQSALQEQRDIVIVASGARGLGSVKPVLDWPPVQAHAGIKKVSVFLESESPDTAPFLDYFGGWRSSGIRVTQCFT 519
            SY +PGQ                 L  +++ P + R++   V   + E    R  G     +EE    +LA L  G +V ++  +GRGF+ L   + GL  AL+E R++V++A G RG+ +++  L+W PV AHA    ++    + SP  A F+  +  WR +G+R+   +T
Sbjct:  138 SYTLPGQ-----------------LYPIASSPYASRRDSAYVDASLIEVVVERSWG-----SEEV---ALADLGPGAQVEVTQVIGRGFSPLLDSYNGLTHALEEGRNLVLIAMGTRGMAAIRSALNWQPVLAHASSHSLTALYLAHSPGRAAFVPEWDSWREAGMRLRPLYT 285
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1927.5703.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7G0B3_ECTSI2.170e-14788.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JHC4_9PHAE6.640e-14187.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0D2JAU4_9CHLO6.750e-3132.47FAD-binding FR-type domain-containing protein n=1 ... [more]
A0A2V0NZ37_9CHLO5.660e-2830.82FAD-binding FR-type domain-containing protein n=1 ... [more]
A0A7J7QDP6_9CHLO6.820e-2831.87FAD-binding FR-type domain-containing protein n=2 ... [more]
A0A8J4CV25_9CHLO4.680e-2729.82FAD-binding FR-type domain-containing protein n=2 ... [more]
A0A5B8MSX6_9CHLO1.070e-1828.87Uncharacterized protein n=1 Tax=Chloropicon primus... [more]
A0A836BUY6_9CHLO6.750e-1730.86FAD-binding FR-type domain-containing protein n=1 ... [more]
D8UGT1_VOLCA5.100e-1529.48Uncharacterized protein n=1 Tax=Volvox carteri f. ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1927contigL-elsbetiae_contig1927:15564..22448 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score286.6
Seed ortholog evalue7.1e-75
Seed eggNOG ortholog2880.D7G0B3
Hectar predicted targeting categorysignal peptide
EggNOG OGs2C243@1,2S4EB@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size839
Cds size471
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815799.7806525-UTR-L-elsbetiae_contig1927:15563..156791622815799.7806525-UTR-L-elsbetiae_contig1927:15563..15679Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1927 15564..15679 -
1691683110.528431-UTR-L-elsbetiae_contig1927:15563..156791691683110.528431-UTR-L-elsbetiae_contig1927:15563..15679Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1927 15564..15679 -
1622815799.8558652-UTR-L-elsbetiae_contig1927:21157..212431622815799.8558652-UTR-L-elsbetiae_contig1927:21157..21243Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1927 21158..21243 -
1691683110.5716217-UTR-L-elsbetiae_contig1927:21157..212431691683110.5716217-UTR-L-elsbetiae_contig1927:21157..21243Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1927 21158..21243 -
1622815799.8667397-UTR-L-elsbetiae_contig1927:22282..224481622815799.8667397-UTR-L-elsbetiae_contig1927:22282..22448Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1927 22283..22448 -
1691683110.5791821-UTR-L-elsbetiae_contig1927:22282..224481691683110.5791821-UTR-L-elsbetiae_contig1927:22282..22448Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1927 22283..22448 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815799.7953382-CDS-L-elsbetiae_contig1927:15679..158501622815799.7953382-CDS-L-elsbetiae_contig1927:15679..15850Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1927 15680..15850 -
1691683110.5380902-CDS-L-elsbetiae_contig1927:15679..158501691683110.5380902-CDS-L-elsbetiae_contig1927:15679..15850Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1927 15680..15850 -
1622815799.8147428-CDS-L-elsbetiae_contig1927:17703..178381622815799.8147428-CDS-L-elsbetiae_contig1927:17703..17838Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1927 17704..17838 -
1691683110.5461788-CDS-L-elsbetiae_contig1927:17703..178381691683110.5461788-CDS-L-elsbetiae_contig1927:17703..17838Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1927 17704..17838 -
1622815799.8256605-CDS-L-elsbetiae_contig1927:19759..198641622815799.8256605-CDS-L-elsbetiae_contig1927:19759..19864Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1927 19760..19864 -
1691683110.554294-CDS-L-elsbetiae_contig1927:19759..198641691683110.554294-CDS-L-elsbetiae_contig1927:19759..19864Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1927 19760..19864 -
1622815799.8386943-CDS-L-elsbetiae_contig1927:21097..211571622815799.8386943-CDS-L-elsbetiae_contig1927:21097..21157Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1927 21098..21157 -
1691683110.56364-CDS-L-elsbetiae_contig1927:21097..211571691683110.56364-CDS-L-elsbetiae_contig1927:21097..21157Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1927 21098..21157 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1927.5703.1prot_L-elsbetiae_contig1927.5703.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1927 15680..21157 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1927.5703.1

>prot_L-elsbetiae_contig1927.5703.1 ID=prot_L-elsbetiae_contig1927.5703.1|Name=mRNA_L-elsbetiae_contig1927.5703.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=157bp
MGRGFASLFVGWIGLQSALQEQRDIVIVASGARGLGSVKPVLDWPPVQAH
AGIKKVSVFLESESPDTAPFLDYFGGWRSSGIRVTQCFTDKTNENPVNVE
AAIFSQGAGLAGAVGGDPGAASFLMAGLPGKRAMELTDRLTDHGVDPSRL
LFNDFF*
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mRNA from alignment at L-elsbetiae_contig1927:15564..22448-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1927.5703.1 ID=mRNA_L-elsbetiae_contig1927.5703.1|Name=mRNA_L-elsbetiae_contig1927.5703.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6885bp|location=Sequence derived from alignment at L-elsbetiae_contig1927:15564..22448- (Laminarionema elsbetiae ELsaHSoW15)
AGCTACAAGGTTCCCGGCCAGTTCGTGGGCATCCGGCTGGACGGGGGCGG
GGACGGGGGGGTGGCGGGTTGCCTGGTGGCGGTGTCTACGGAGCCCCTCT
CCGTGAGACAAAACGGCGGGACTGTCCAGGTTTTGGTGACGGAGGAGGCT
AGCTTTCGGCTCAAGGGTGAGAGTGATGTACATAGCTGTCTTGTCGTTCC
GGGGCTCTTGTGTTTTTGGGGTTTGCTGTTGTTTTTGCTGTTTGTTGTTG
TTTTTGTGTGTTGTTTTTTGGTTGTTGCTGTTGTCGTGCTGCTGCTGCTG
CTGCTGCTGCTGTTATTGTTGCTGTTGTTGTTCGTGGTGGTGTTTTTGTT
GGTGGTGCTGTTGTTGGTTGCGGGTAGTGGTCTTGGTGGTGACGGTGTGG
CGGTGTGGCTGCTCCCCTGACAATCGCATTTTGAACGGTTTCTTTTTCAC
CTTGGACGTTCGCTCGTTCCTGTCTAGTCCGTCTCGCGCTTCAGTAAAAG
AGAAGAAGGAACTTTTAGACGAGGGTGCGGCGGGATGGTATCCCGTAGGG
GCCACCTCCGATTCTTCGAATTTTCTGTCCGTTTTTTGTATTTTTTTCAA
ATAAGCAATAAATCAAAGATGGAACCTACCCCACACTAGAGCAAGGACTC
GATATGGGTTCAAACGTTTTTTTTTGCAGAGCTAAATTAAGAGAACACTT
GCATACCCTTCTGTCTCTTCTACATACTTCCATAGGAACACTTGATTCTT
GGTGTGCTCTCTCTTGTCACTCACGATTGTTGGAGAGCCTTTATTTGTTT
ATTTGTTTATTTGTTTATTTATTTTTCCAACATAACGCCCCGCCCAACGG
GAGCCCCGAGAGTCAGTCGCCACCGGGCAAACTAAACACGTTTTTTTATT
TTGTCCTGGTGTGGAAACCGCGTAACCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCTTTTGCTCTCGTTTCCCTATCTTTCTTCTTGTTCA
CTCTCACCCCCCCCNNNNNNNNNNCACCGCGCAAAAAAAAATCTTTTTTT
TTTTTTTTTTTTTTTTTTTAACCGCCAACCCCCCCCCCCCCCCCCTCCCG
CCCCCCTCCGGTATTTGTGATATTTCTAATTGGATTTCTCGTTCTATCAC
CCACCACCCCGCCCGCCGTGCTCACCATTCCCCATCGAAAATGGATCGAT
CGAAGGGGACACCAGGGGCCCCGCAGAGGAAGCGAAAGGGCGGTCCCTCG
CGGCCTTGGAGAAGGGCGACAGGGTCAGGATCAGCGACTTCATGGGGAGG
GGGTTTGCGTCGCTGTTCGTGGGGTGGATCGGCCTGCAGTCCGCTCTGCA
GGTGCTGCTTTTTTGTTATTTTTTATTGTGTTTGTTTTTTTGTGATCGGT
TTGTGTACATACAAATCGCCAAGCAGTCTTGTTGTGCGTACATCCGGCCT
GTGGAACAAGTGTTTCCAATGCGGGGCCCGTCCCTCGCCGGTCCTATTTA
GCCTGTCCGTGATACAGAGTACCGTAGGTGACACAAGATACCACACCCCC
TGGACAGATTTTCAAAGCTCGATTCCTTCCCAGCAAGAAGAGTGCCAGTG
CCAAAAAGGTTAGCGTTGGAAAGATCTAGTCGGGGGCTGTCCAAAAATGT
TTCGTTTGGTGCTGGCACCTTCTTCGTTACGGAGTAATGGAGCTCTAAAA
TTCGGTCCAGGGGGTGTGGTATCTTGTGTCACCTACGGTATCCTATGGTT
TTCTGGTTCAGGTTGTTTGGAAATGTGTTGTTCTTTGCGTTGTTTTCTTC
GCATTAAAAACCTTTTCGCTCTATCCAGTATCCCCGTCTGTCCGTACTTG
TCTAATCCAACACTTGACGCCGTCGATTCCCGTGGTCACGGGATATCACT
TACCCTAACAAGTAAAAAGGGCTTGTATGTAAGTAATGGAAAAAAAGGGT
ATGTATGCGTATGTACTAAAAAAAAAAAAAAAAATTGTGGTGTGACCCCG
GTTGGTTCTAGTTGTACAGACAAATGCACTGCAGAGTGTAGTACCTCTAA
GTACACCGCAAGGTGTAGTACACGTCTCCACTTGGGGGGACTGTCGCCAA
AATAAATGGGAAGGACACACACACACACACACCCACACACACACCCACAC
CCACACACACACACACACACACATGTCTCGCGGAAGCACAGATCCAGCCA
CGCATAAGATAGGAGTTGGCTGGCAGCAACCTACCCCCGGAGCACAGTTT
CTGCCTCTGCCTAACTTCCTTTCGCTTCTCCTGCCTTTTCGCTTCTCCTG
TCTTTTCGTGCCCCTCTGGGAGTGTTTTGGTTTCAATCGCGTGCGTGCGC
GTGCTCGTCTACGAAAAAGCTTTTCACCTGTGCGCTGCCTGCCTGTATCC
AGAAGCCGATACGCAATTTGTCTGTCTGTGTGTTGAATTCCTTCCGATTA
TTGGTAATATAAACCGCTCGCTCACACAACCAAATTTATATCTCCCGATT
TGAGACACGGGAAAGCTGCTGGATGATGAGTACGGTAGTACTCTTACCTC
CCCCCTTCTTCCCCCGAAATGTGAAAACTTCCAGGAGCAACGGGATATCG
TGATCGTGGCCTCGGGTGCCAGAGGCCTGGGTTCGGTGAAGCCCGTGCTG
GACTGGCCTCCGGTTCAAGCGCATGCGGGCATTAAGAAGGTGTTGATTGT
GTGTTGTTGTTGTTGTTGTTTCTCACATTAGCCCTCGAGCCCAAAACATC
CTTGGGGGGCCCCGTGGTCGCAAAACACTTAAGGGGGCACACTCGACGCC
GCGGAAGAAACATAAAACAAAAAAATATGGTAGGGTACATGGGGTTAAAC
TGGATGTGTTGTCTTCACATTGAAAACCGTTCCGATCTCTCTATCCAGCA
CACCTCCATGAGTCCTTGCTATTCCAACACTTGACGCGGTCGATTCCCGT
GGTCACAGGATAACTTACCCTGAAAAGGATTGTTGTTGTTTCTCACATTA
GTTAGCTCTCTAGTCCGAAACATCCTTGGGGCCCGTGGTCACACAGTACA
TAAAGGGTATGTTTTGCTTGCGAGAAGGGTCCAGCCGTCCCTTTTTCGTA
CCGATGACTACTTTTTGTATCTGCCTCTCCCACGCAGTGCCGCTCGTTAC
ATACGCGGGGGCCGCCATACGTGCACGTCCTGCTGCGCACGTTCCTCTCT
ATTCTCTGACGTTCTTTGTAACCGCCCGCTGACGCTTGGCGTCAGGGCCT
GACTTGATAGAAGTATGCTTATTTTTATTTATTTTTATTAAATGTATACA
AATGTCAGCAGTCTACGTCCGGTCTGTGAAAATATCGTTCCAGAGGGATC
TGTTGTAGGCGTACTAACCCCCCCTTTTCCCCGTCCCAAGATACACTCGC
GCAAAATCCATTTTTCATGCTTTTTCGCTTGTTTTGGCATAAATTTCATG
CACACAAGAAACGAGCATATAACTATCGCGTTTTAGGCTAATCCATCCGT
TCATAAGTCGAGCATAAATGGCCATTTTTTCGAGCCTAACTCGGCCTTTT
CGTATGTAAATATGCCCAAGAAGCCCATTTATGCAAAAACATTGTGCATG
CGTATCAAGTCAGGCCCTGCTTGACGTGTGCGCATCATCATCATCATGCC
GTGCGGATTTTATACCATTCCCTTCGGGTATCTGCTTGTTCTAGTATTTT
TGGATGCTGGCTGGTCCCTTGCTCTGCCATTCGTTGTAAGTAACCGTCGA
CGCCTGCCGTGTACATACATATGCATATCATGATGCCATGCGGGTTTTAC
ATAAACCCCCTTTGATGAAGTTCTCAAATATGGAGGTACTATCCTACTTT
CAGGGGAAATTGTCCCTACTTGGTTTTACCCCCTTTCATCAAGTTCGCAA
ATATGGAGGTAAGGCTATTTTTCTGGGAAATTGTCCCTACGTGGTTTCGC
CCCCTTTCATCAAGTTCGCAAATATGGAGGTAAGGCTATTTTTCTGGGAA
ATTGTCCCTACGTGGTTTCACCCCCTTTCATCAAGTTTTCAAATATGGAG
GTACTATTTTTCTGGGAAATTGTCCCTACTTGGCTTTACCCCCTTTCATC
AAGTTTTCAAATATGGAGGTACTATTTTCCTGGGAAATTGTCCCTACTTG
GTTTTACCCCTTTTCATCAAGTTCTCAAATATGGAGGTACTTTTTTTCTG
GGAAATTGTCCCTATTTTGTGCATGCATACATACATACATGTGTGCGCTT
TGTCTTTCTGCAGATGGGTGTTTGTGTTTGTGGCGCCTCCTTATTATTTT
AGGGAGGAAAATTGACGTCTAAATCGGCGAGCATTTGATGCACTGGGAAC
ATACGCGCTACATAGCCCGTCAGCATTTCGGTGTTCCTGCTGTGTGCGAA
GGCGATGGCTGCGAGAGGGCTATTGTATCTTCCGTGTGGGCAGAGATTTT
GACAAAAAAACAATTTCGAAAAACAGCGTTACCCTTTCTTGGGCTTCGTT
TTTCTAGGCTTCATTTTTCTGTATCTGTCTTGAGAGGGAAGGCCTTTCTT
CTAAGGAACTAAGGAATTTGTGCATGCATACATACATGTGTGCGCGTTGT
CTTCCGGCAGGTGAGCGTGTTTCTGGAGTCGGAGAGCCCAGACACGGCAC
CGTTCTTGGACTATTTCGGCGGCTGGAGGTCGTCGGGCATCCGCGTGACC
CAGTGCTTCACGGACAAGACCAACGAGAACCCGGTCAACGTCGAGGTACG
CAAGTTGTGGGAGGTGGTGCAGCGCGCAGAATATGTTGTTGTTGTTGTTC
GCTGTTGCTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGGTTG
TTGGAGGTGGTGGTGGTGGCTTTCGTTGCTGTTGTTGTTGTTAATGGTGG
TGATGGTGATGGAGTTTGCTGCTGCTGCTGTTGTTGTTGTTGTTGCTGTT
GTTGTTGAGGTGGTGTGGCGTTGTGTTTTGAAATGGCGGGACCGTCAATC
CAGTGCTTCATGGACAAGACCAACGATAGCCCCGTCAACGCCGAGGCGAG
CAGACGCGTGGAATGGATGTTACAGCACGCAGAGTAGATGTTGTCGATGT
TCTCTGTTGGAAGCGGCGGCGGGGTTGCTGTTGCTGCCGTTGTTGTTGTT
GGAGGTGTTGGTGGTGGCGTTGTATTTGAAATGGCGGGACCGCTGTCAGC
CCAGTGCTTCACTGACAGAGTGCTTATGTTGGTCGTCATTTCTGCGTGCC
CCCCTCCCCCCCTGCCCTCTCTCCCGCGCACATGCCGCGGAAACCTCATC
TTCGGGAAACCTCATCTTCGGGAAACCTCATCTTCGTGTCAGCTTCCCCC
GTGCACGTGCAACAACATGGCCGTCCGTTTCGCCCTATATTGCGGCCCCC
TCTCCCTCCTGCCACCAGTCGTTTCACGTTTTACGTTTTACCTAGGGCCT
GACTTGATTATGCTCATTTTATTTATTTTTTATGCATTTTTGCTTGTTTC
GGCATAAATTTCGTTAAACATGCACACAAGAAATGAGCGTAACTACCACG
TTTTAGGCTTAATCCGTGCATAAGTCGAGCATAAATGGCCATTTTTTCGA
GCATAACTCGGCCTTTTCATGCGTATGCTGCCTTTTCTACATATGCTATC
AAGGAGCCCATTGATGCAAAAGCTTGTGCATGCATATTAAGCCAGGCCCT
AGGCCACTTCATTTTATGCAAAAACTTGTGCATGGCATATCTCAAGTCAG
GCCCTAGTTTTACCCGCCACTCACTACCATCACCACCACCACCACCACCA
CGACTGCATACCCACGCACCAGGCGGCGATTCCATTTATGCAAAAACTTA
TGCATGCATGAATATCAAGTCAGGCCCTAGTTTTACCCGCCACTCTCACC
ACCATCACCACGACTGCATACCCACGTGCCAGGCGGCGATTCCATTTATG
CAAAAAACTTGTGCATGCATGAATATCAAGTCAGGCAGGCCCTAGTTTTA
CCCTCCACTTCATTTCATTTTATGCAAAAACTTGTGCATGCATGCATATC
AAGTCAGAAAGGCCAAAGTTTTACCCGCCACTTCATTTCATTTTATGCAA
AAACTTGTGCATGCATGCATATCAAGTCGGACAGGCCAACGTTTTACCCG
CCACTCACTACCGCCGCCACCACCACCACCACGACTGCATTCGGCCTTGT
GTACCCTTGCCCGGTGTACATATCTGTGTGTGTCTTTTTCGGATCTTCTG
ATAGCTCTGGCACTTGTGTCACCACGGGCCGTGAGTTGCTAGATTTTGGA
ATTATTTGGCAATCTCGATTATACGAGCTAATGTGAAAACAACACCAACA
ACAACAACAACAACCCACGTACCGTAGGTGACATAAGATAAGACACCCCC
TGGACCGAGATTGAAAGCTTGGTTACTCCGCAACGAATACGATTCTAACC
ACAAACGCCACATTTTCGGACAGCTCTCGACGAGACCTTTCCAACGCCGC
CCTTTTCGGGACTGACGCTCTGCTTGCTGTGGAGTACTTGAGCTTTGAAA
ATCGGTCCAGGGGGTGTCTTATCTTATGTCACCTACGGTACGCACCAGGC
GGCGATTTTCTCCCAGGGTGCGGGGCTCGCCGGGGCCGTCGGAGGAGACC
CAGGCGCGGCGTCGTTCTTGATGGCTGGCCTTCCGGGGAAGCGCGCGATG
GAGCTGACCGACCGGTTAACAGACCACGGGGTGGACCCCAGCCGGCTGCT
CTTCAACGACTTCTTTTGAGCAGCGGGGTCTTGTCTTGCCGGAGTGTTTT
TTTGCGCGCGGTGTGCCGGCCGCATTTATTTGCACTTTTTCCGCCTCTTT
TTTTTCATTTTTTTTTCTTCTTTTTTTTGTGTTGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1927:15564..22448-

>mRNA_L-elsbetiae_contig1927.5703.1 ID=mRNA_L-elsbetiae_contig1927.5703.1|Name=mRNA_L-elsbetiae_contig1927.5703.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=942bp|location=Sequence derived from alignment at L-elsbetiae_contig1927:15564..22448- (Laminarionema elsbetiae ELsaHSoW15)
ATGGGGAGGGGGTTTGCGTCGCTGTTCGTGGGGTGGATCGGCCTGCAGTC
CGCTCTGCAGATGGGGAGGGGGTTTGCGTCGCTGTTCGTGGGGTGGATCG
GCCTGCAGTCCGCTCTGCAGGAGCAACGGGATATCGTGATCGTGGCCTCG
GGTGCCAGAGGCCTGGGTTCGGTGAAGCCCGTGCTGGACTGGCCTCCGGT
TCAAGCGCATGCGGGCATTAAGAAGGAGCAACGGGATATCGTGATCGTGG
CCTCGGGTGCCAGAGGCCTGGGTTCGGTGAAGCCCGTGCTGGACTGGCCT
CCGGTTCAAGCGCATGCGGGCATTAAGAAGGTGAGCGTGTTTCTGGAGTC
GGAGAGCCCAGACACGGCACCGTTCTTGGACTATTTCGGCGGCTGGAGGT
CGTCGGGCATCCGCGTGACCCAGTGCTTCACGGACAAGACCAACGAGAAC
CCGGTCAACGTCGAGGTGAGCGTGTTTCTGGAGTCGGAGAGCCCAGACAC
GGCACCGTTCTTGGACTATTTCGGCGGCTGGAGGTCGTCGGGCATCCGCG
TGACCCAGTGCTTCACGGACAAGACCAACGAGAACCCGGTCAACGTCGAG
GCGGCGATTTTCTCCCAGGGTGCGGGGCTCGCCGGGGCCGTCGGAGGAGA
CCCAGGCGCGGCGTCGTTCTTGATGGCTGGCCTTCCGGGGAAGCGCGCGA
TGGAGCTGACCGACCGGTTAACAGACCACGGGGTGGACCCCAGCCGGCTG
CTCTTCAACGACTTCTTTTGAGCGGCGATTTTCTCCCAGGGTGCGGGGCT
CGCCGGGGCCGTCGGAGGAGACCCAGGCGCGGCGTCGTTCTTGATGGCTG
GCCTTCCGGGGAAGCGCGCGATGGAGCTGACCGACCGGTTAACAGACCAC
GGGGTGGACCCCAGCCGGCTGCTCTTCAACGACTTCTTTTGA
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