mRNA_L-elsbetiae_contig192.5672.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig192.5672.1 vs. uniprot
Match: D8LI60_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI60_ECTSI) HSP 1 Score: 780 bits (2014), Expect = 1.090e-252 Identity = 636/1334 (47.68%), Postives = 741/1334 (55.55%), Query Frame = 1
Query: 277 MPLLA-----DSTVLNPD-GTSLFPYGMSPGLDGKVLRDIPDHAGKTWKAYHERQARLAEQRQYSRPVVVDHLLWGDLLSGKLAELVEGERNHPRSIVYGGAADRDGGRCLLPELDDIRLHSGHDQAVAAAVGRPKILRFSAEGSEYTADEIGAGGDFNEMYERLYNGFDQRIKEANGVAAQRAWSRAGRPGDTAYGGSNRERRSREQTSRDTKSIPWELGKTRADSTAPPTTLGNGARGGGTAESGRSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL--DADLQAHSSPHIGPDTHRLMADEVEVVHKMRDEERADGSHASLATQMENRLVPMGGGAEGKRKLRGTAARERQERARIVVKDRYVEEAVRRN-RAPFNGDNDXXXXXXXXXXANNTICSVATFEAHYIQVMQAADALPTVERGFNAGQLDA---EKPGKARVLPVLTPAVAAVPPTAAAVEKEKXXXXXXAERAEKLGDKRERAKCRSAATLASSGGSEALTDTLLPRHMEGGGGGGS-----------------REFGDARDEVSLAPSMSSLGSYDEHS----GCAPPPFLQRAQEAGTADRPRPAVLLLPPAVDHTAGKHEPALRWRSRR--SIPAALPSATTTSAGTEGG---SACSFP----PTGSGSAATVEGGVPTERERSSSRLGISFGGASKRRRSRR----SSSSGIGARLAVTPSTAAVGRDGQEKSVASATGSPLTGATGAPVSSTTTAVA-TTALLKQKISWWRSRS-KPTPKAPNRLSALTTRTGEDG--LSR---SAISSPAPPYSRGESDCGDHRPPRDGSTVSETSPIYTTASREPHHQLPAAREGMTNDERTRTSLVTSLLTSSGGSVVGSMSAGPLTET-DLSMASFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASGMAWGRLDSAEHRKLRKKRRGQGRTGT-----VQRVHKINLGSKGHQKLMQPEERTALLIGACEWGDLEALERLLELGASPLDRYSPSVEESRCVFCQFFLFVLQVGAGLRPRLAPDESLYTRALAALVEARLEDNPRFLQSPQLRDQD-DRGFSLLHHAAAFGNASKVEFLLERGVDPDARVEGNNETALLVAARRGQRLHLRVAAALIRAGANLLARDHKGMTALHHAADVGRKHMCHYLLLVGADKTGQDNEGRTPLDLCQGKYPRVSAILRLFIGCKPSPATILDYMEKVEVHGLDDSTAQGLMLQEQTEREAAAEEASKXXXXXXXXXDAANAATDSVFGDGENSMATWDAASLGGM-SGEGASVLSFGTL 4095
MP+LA D V + D G PYG SPGL G R PD+A KTWKAYHERQA LA +RQYSRPV VD ++WGDL+ KLAEL+EGERNHPRS+V GGAADRDGG CLLPELDDI LHSGH+QAVAAAVG+PK LRFSAEGSEYTAD+ GAGG F+EMY+R Y GF IK+A G+AA+RA SRAG P D S RERRSRE+TSR+ ++IPW+LG RA + XXXXX XXXXXXXXXXX DADL+AH PHIGPD HRL+ DEVE V + EE ADG AS A QM++RLV +GG AEG KLRGTAARER+ERAR+ +KDRY+EEAVRRN RA +G +D XXXX +T CSVATFE YI+ QAADALP VE NA + E P V +P A+ XXXXXXAER +L KRE+A+ T + G S + ++GG G E GD D+ SL PS+SSLG+YDE S G P LQ QE +A R IP PS T S T GG + S+ PTGSG ++GG ER R+ SRLGI+FGGASK SS GA LA A+ G + +A AT P G G SST +A T ALLK KI WR R P P LSA T +D LSR A +SP G P +P + G + ERT + S+ S+ GS A ++ T D S XXXXXXXXX S A GR D + + R+KRR R+G QRVHKINLGSK Q M +RTALLIGACEWGDLEAL+RLLELGASPLD YSPSVEESRCVFCQFFLF+LQVGAGLR RLAPD+SL+ RAL+ L++ LE+N RFL PQLRDQD RGF L+HHAAAFGNA+KVEFLL+RGVDPDAR G +ETAL+VAARRG+R HLRVAAALI+AGAN LARD G T LHHAA GRKHMCHYLLLV +D C+ ++PR A+++ F+ +P PATILDYMEKVEVHG AQ L+L +Q E XX GDGE+SM +WDAASLGGM SG GASVLS G+L
Sbjct: 1 MPMLAAVAETDEAVGSDDAGWPPSPYGASPGLAG-APRATPDYARKTWKAYHERQALLAGRRQYSRPVEVDPVVWGDLIGKKLAELIEGERNHPRSVVRGGAADRDGGHCLLPELDDIHLHSGHEQAVAAAVGKPKFLRFSAEGSEYTADDFGAGGGFDEMYQRRYAGFSPLIKQAGGLAAKRARSRAGYPDDQVE--SYRERRSREKTSREAEAIPWDLGAARAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXWSXXXXXXXXXXXFGDDLFAGDAAAVLQQSAEQQENKNDGQRPDADLEAHPIPHIGPDAHRLLPDEVEAVLRGHAEESADGYDASFAAQMQHRLVSVGGSAEGM-KLRGTAARERRERARLGLKDRYLEEAVRRNHRAASHGYDDEXXXXNA-----STSCSVATFEDFYIKSTQAADALPVVEGRMNAEETKGASMEAPXXXXXXXXXVEEV--MPSPEEAIRXXXXXXXXXAERVARLELKREQAR---RGTTSLDGSSISTDPPGAETSLDGGPPSGEILXXXXXXXXXXXXXXXXEVGDPEDDASLDPSVSSLGTYDERSRGGSGGGAPRNLQNLQEPTSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRLADIPPTPPSPTAASVSTGGGVQSAVLSYSTGDVPTGSG--VGLDGGGLAERGRNLSRLGIAFGGASKXXXXXXXXXXSSIGASGAALAPLGPAASGSSIGLQP-LAPAT-IPAVGIDGNGTSSTGAVIAPTVALLKGKIKGWRRRKLSAAPTVPPPLSATLTPVVDDDRRLSRWSSRASASPGALLPLVAMADGXXXXXXXXXXXXXXXXXXXXXXXXPMALIPV-KVGTMDGERTLSDSQ-----SASSSLAGSTQAALISGTVDXXXXS---RTVSETPTLGSKAEGSVAGGXXXXXXXXXAPIAGGVPGMGQAGAGMDGGGGSAAARGRYDVGDPQMNREKRRSGRRSGADNGGNTQRVHKINLGSKKDQMTMTHADRTALLIGACEWGDLEALQRLLELGASPLDLYSPSVEESRCVFCQFFLFLLQVGAGLRSRLAPDDSLHDRALSMLIQPSLEENRRFLSKPQLRDQDVGRGFCLVHHAAAFGNANKVEFLLQRGVDPDARARGGDETALMVAARRGKRTHLRVAAALIKAGANKLARDRSGRTPLHHAASAGRKHMCHYLLLVXXXXXXXXXXXXXXMDACRAEHPRAFAVMQSFVSRRPPPATILDYMEKVEVHG----HAQELLLCQQAEAVXXXXXXXXXXLVAG--------------GDGEDSMTSWDAASLGGMVSGTGASVLSLGSL 1289
BLAST of mRNA_L-elsbetiae_contig192.5672.1 vs. uniprot
Match: A0A6H5JK81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK81_9PHAE) HSP 1 Score: 736 bits (1899), Expect = 1.190e-232 Identity = 631/1377 (45.82%), Postives = 753/1377 (54.68%), Query Frame = 1
Query: 265 SSSGMPLLA-----DSTVLNPD-GTSLFPYGMSPGLDGKVLRDIPDHAGKTWKAYHERQARLAEQRQYSRPVVVDHLLWGDLLSGKLAELVEGERNHPRSIVYGGAADRDGGRCLLPELDDIRLHSGHDQAVAAAVGRPKILRFSAEGSEYTADEIGAGGDFNEMYERLYNGFDQRIKEANGVAAQRAWSRAGRPGDTAYGGSNRERRSREQTSRDTKSIPWELGKTRADSTAPPTTLGNGARGGGTAESGRSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDADLQAHSSPHIGPDTHRLMADEVEVVHKMRDEERADGSHASLATQMENRL-----------------VPMGGGAEGKRKLRGTAARERQERARIVVKDRYVEEAVRRNR-----APFNGD--------NDXXXXXXXXXXANNTICSVATFEAHYIQVMQAADALPTVERGFNAGQLDAEKPGKARVLPVLTPAVAAVPPTA----AAVEKEKXXXXXXAERAEKLGDKRERAKCRSAATLASS------GGSEALTD--------TLLPRHMEGGGGGGSREFGDARDEVSLAPSMSSLGSYDEHS---GCAPPPFLQRAQEAGTADRPR------PAVLLLPPAVDHTAGKHEPALRWRSRRS-IPAALPSATTTSAGTEGG---SACSFP----PTGSGSAATVEGGVPTERERSSSRLGISFGGASKRRRSRRS-----SSSGIGARLAVTPSTAAVGRDGQEKSVASATGSPLTGATGAPVSSTTTAVA-TTALLKQKISWWRSRS-KPTPKAPNRLSALTTRTGEDG--LSRSAISSPAPP--------YSRGESDCGDHRPPRDGSTVSETSPIYTTASREPHHQLPAAREGMTNDERTRT---SLVTSLLTSSGGSVV-GSMSAGPLTETDLSMASFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASGMAWGRLDSAEHRKLRKKRRGQGR----TGTVQRVHKINLGSKGHQKLMQPEERTALLIGACEWGDLEALERLLELGASPLDRYSPSVEESRCVFCQFFLFVLQVGAGLRPRLAPDESLYTRALAALVEARLEDNPRFLQSPQLRDQDD-RGFSLLHHAAAFGNASKVEFLLERGVDPDARVEGNNETALLVAARRGQRLHLRVAAALIRAGANLLARDHKGMTALHHAADVGRKHMCHYLLLVGADKTGQDNEGRTPLDLCQGKYPRVSAILRLFIGCKPSPATILDYMEKVEVHGLDDSTAQGLMLQEQTEREAAAEEASKXXXXXXXXXDAANAATDSVFGDGENSMATWDAASLGGM-SGEGA--SVLSFGTL 4095
SS+ P+LA D V + D G PYG+S GL G R PD+A KTWKAYHERQA LA +RQYSRPV VD ++WGDL+ KLAEL+EGERNHPRS+V GGAADRDGG CLLPELDDIRLHSGH+QAVAAAV +PK LRFSAEGSEYTAD+ GAGG F+EMY+R F IK+ G+AA+RA +RAG P D S+RE RS E+TSR+ ++IPWELG RA AP XXXXXXXXXX DADL+AH PHIGPD+HRL+ DEVE V + EE DG AS A QM++RL V +GGGAEG +KLRGTAARER+ERAR +KDRY+EEAVRR AP + +D A+ T CSVATFE Y++ QAADALP VE G+++AE+ A ++ A PP A A + K++ AER +L KRE+A+ + SS GG +L LLPR G GD D+ SL PS+SSLG+YDEHS P LQ +E +A PAVL LP A D A + R RSR + +P PS T S T GG + S+ PTGSG ++GG ER R+ SRLGI FGGAS S GA LA AA G + +A AT P G G SS A A T ALLK KI WR R P P LSA T + LSR + + P + G+S RD + + L + G + ERT + S ++SL S+ ++ GS+ +G ++ T S XXXXXXXX XXXXXXX A G+ D + + RKKRR R TG QRVHKINLGSK Q M +RTALLIGACEWGDLEAL+RLLELGASPLD YSPSVE SRCVFCQFFLF+LQVGAGLR RLA D+SL+ RAL+ L++ LE N RFL PQLRDQD+ RGF L+HHAAAFGNA+KVEFLL+RGVDPD R G +ETAL+VAARRGQR HL VAAALI+AGA+ LARD G T LHHAA GRKHMCHYLLLV +D C+ +PR A+++ FI +P PATILDYMEKVEVHG AQ ++L++ XXXXXX +SMA+WDAASLGGM SG GA SVLS G+L
Sbjct: 258 SSTPSPMLAAVAETDEAVGSDDAGRPPSPYGISLGLAG-APRATPDYARKTWKAYHERQALLAGRRQYSRPVEVDPVVWGDLIGRKLAELIEGERNHPRSVVRGGAADRDGGHCLLPELDDIRLHSGHEQAVAAAVCKPKFLRFSAEGSEYTADDFGAGGGFDEMYQR----FSALIKQVGGLAAKRARTRAGYPDDQVE--SHRESRSSEKTSREAEAIPWELGAARA--AAPXXXXXXXXX----XXXXXXXXXXXXXXXXXTIGGSEFGDDLFAGDAAAVLQRSAEQQENKNDGQLPDADLKAHPIPHIGPDSHRLLPDEVEAVLRGHAEESVDGYDASFAAQMQHRLRSLRSSKRGVWFCMWGLVSVGGGAEGMKKLRGTAARERRERARPGLKDRYLEEAVRRQERRSHIAPAKVERWRNHRAASDDYDDEDDDQNAS-TSCSVATFEDFYLKSTQAADALPVVE-----GRMNAEETKGA--------SMEAPPPLAKVEEATIRKQQRREERRAERVARLELKREQARRGKTSLDGSSISADPPGGETSLDGGPPSGEILVLLPRRKIGXXXXX-XXVGDPEDDASLDPSVSSLGTYDEHSLSGSSGAPRNLQSLEEPPSAKATGGGGGRLPAVLPLPSAAD-VAEEIRRRPRRRSRLADVPPTPPSPTAASVSTGGGVQSAVVSYSTGDVPTGSG--VGLDGGALAERGRTLSRLGILFGGASXXXXXXXXXXXXXSIGASGAALAAL-GPAASGCSIGLQPLAPAT-VPAIGFDGNGTSSAGAAAAPTVALLKGKIKGWRRRKLSAAPTVPPPLSATLTPVVDXXRRLSRGSSCASTSPGALLPLVAMADGDSXXXXXXXARDIAXXXXXXXXXXPMA------LIPVKVGTMDGERTLSDSPSAISSLAGSTQAALTSGSVDSGTVSRTVSGTPSLGSEAETSATAGSXXXXXXXXAPIAGGVPGMGQAGAGMDGXXXXXXX----------ARGQHDGDQPKMTRKKRRSGRRSGADTGNTQRVHKINLGSKKDQMTMTHADRTALLIGACEWGDLEALQRLLELGASPLDLYSPSVEGSRCVFCQFFLFLLQVGAGLRSRLAMDDSLHDRALSMLIQPSLEKNRRFLSGPQLRDQDEGRGFCLVHHAAAFGNANKVEFLLQRGVDPDVRARGGDETALMVAARRGQRPHLEVAAALIKAGADKLARDRSGRTPLHHAASAGRKHMCHYLLLVXXXXXXXXXXXXXXMDACRTGHPRAFAVMQSFISRRPPPATILDYMEKVEVHG----HAQEVLLRQXXXXXXXXXXXXXXXXXXX------------------DSMASWDAASLGGMVSGTGAISSVLSLGSL 1563
BLAST of mRNA_L-elsbetiae_contig192.5672.1 vs. uniprot
Match: A0A3B4AKF9_9GOBI (Regulatory factor X-associated ankyrin-containing protein n=3 Tax=Oxudercinae TaxID=497678 RepID=A0A3B4AKF9_9GOBI) HSP 1 Score: 63.5 bits (153), Expect = 1.150e-7 Identity = 46/121 (38.02%), Postives = 66/121 (54.55%), Query Frame = 1
Query: 3394 QSPQLRDQDDRGFSLLHHAAAFGNASKVEFLLERGVDPDARVEGNNETALLVAARRGQRLHLRVAAALIRAGANLLARDHKGMTALHHAADVGRKHMCHYLLLVGADKTGQDNEGRTPLDL 3756
+S L QD+RGF+ L AAAFG + V++LLE+G DP + E+AL +A+ G + A L+R G ++ + D G T L +A G C LL GAD T + + G TP+ L
Sbjct: 39 KSSLLNKQDERGFTPLMWAAAFGEKAMVDYLLEKGADPKT-IARERESALTLASSGG---FADIVACLLRHGVDINSYDWNGGTPLLYAVR-GNHIKCVETLLKGADLTIESDSGYTPMAL 154
BLAST of mRNA_L-elsbetiae_contig192.5672.1 vs. uniprot
Match: H2L5A9_ORYLA (Regulatory factor X associated ankyrin containing protein n=1 Tax=Oryzias latipes TaxID=8090 RepID=H2L5A9_ORYLA) HSP 1 Score: 59.7 bits (143), Expect = 3.850e-6 Identity = 46/125 (36.80%), Postives = 68/125 (54.40%), Query Frame = 1
Query: 3385 RFLQSPQLRDQDDRGFSLLHHAAAFGNASKVEFLLERGVDPDARVEGNNETALLVAARRGQRLHLRVAAALIRAGANLLARD-HKGMTALHHAADVGRKHMCHYLLLVGADKTGQDNEGRTPLDL 3756
R +S L QD+RGF+ L AAAFG + V+FLLE+G DP + E+AL +A+ G ++ + +L+R G ++ D G T L +A G C LL GAD T + + G +P+ L
Sbjct: 44 RLSKSSLLSRQDERGFTPLMWAAAFGEKAVVDFLLEKGADPKT-IARERESALTLASSGG---YVDIVESLLRHGVDINTYDWQNGGTPLLYAVR-GNHVKCVEALLKGADMTIESDSGYSPMAL 163 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig192.5672.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig192.5672.1 >prot_L-elsbetiae_contig192.5672.1 ID=prot_L-elsbetiae_contig192.5672.1|Name=mRNA_L-elsbetiae_contig192.5672.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1279bp MPLLADSTVLNPDGTSLFPYGMSPGLDGKVLRDIPDHAGKTWKAYHERQAback to top mRNA from alignment at L-elsbetiae_contig192:26109..38573+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig192.5672.1 ID=mRNA_L-elsbetiae_contig192.5672.1|Name=mRNA_L-elsbetiae_contig192.5672.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=12465bp|location=Sequence derived from alignment at L-elsbetiae_contig192:26109..38573+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig192:26109..38573+ >mRNA_L-elsbetiae_contig192.5672.1 ID=mRNA_L-elsbetiae_contig192.5672.1|Name=mRNA_L-elsbetiae_contig192.5672.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=7674bp|location=Sequence derived from alignment at L-elsbetiae_contig192:26109..38573+ (Laminarionema elsbetiae ELsaHSoW15)back to top |