mRNA_L-elsbetiae_contig1919.5665.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1919.5665.1
Unique NamemRNA_L-elsbetiae_contig1919.5665.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1919.5665.1 vs. uniprot
Match: D8LUD1_ECTSI (C3H1-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LUD1_ECTSI)

HSP 1 Score: 454 bits (1169), Expect = 4.720e-152
Identity = 277/497 (55.73%), Postives = 316/497 (63.58%), Query Frame = 3
Query:   24 MSTIPMSSGAEWRLFPPPVKQAPPTVGDKVFVRTKSAKEVGKKGVVFAFEKVEA-PAVPPLRRGDLAEGP----SKEVASGC----------GNXXXXXXXDVDGRSTVWREV-KKXXXXXXAKKWEDTRALIRIS-RGAEGENLSDCRARPSRLVPIFDVPAVARSTGLVTAVGAPLLVLLTAETIPYRLLAASQVRPNDRVLEVGCSTGETTAVLVKYVPQGHVVALDVGADMVERTKERLALAKSESGRTCARVRVTKVDPFLDPRGAVEAAS----ALIRPDGED--EPTDGQTDTEKISAGESRTVDAVFIDIGGNREVRGVARMIAFARTAFSTPPRLIVVKSQGLVAELTANHSGAGPKAD----------SAVKCQRQSGKIVEGDSWFRELLARSTTVASASGGSIEDRETD-SQGTGKHDIPKHFHPNRAPLRLSPKDGATPICRYHNYHREGCKKGERCPYEHAICHWCLRPGHVALVCDDPSEFS 1412
            M+ I MSS  EWRLFPPP+K AP +VGD+VFVRTKSAKEVGKKGVV A EKVEA P V P    + AE        E ++ C          G        D  G +T+WR V ++       KK+EDTRA+IR+  R     N  D RARPSRLV I+  P   RST            LLTA+T  +RLLAASQVR  D VLEVGCSTGETTA+L KYVP+G VVALDVGADMVERTKERL L  SES   CA V V K+DPFLDPRGAVEAA     A I  DG D   PT G              VDAVFIDIGGNREVRGV RMIAFARTAF+ PPRLIVVKSQ LV EL A+ +  G   D          S      + G+I EGD WFRELLARST+   +   + E    D S G      PKHFHPN+APLRLSPKDG TPICRY+NYH+EGCKKG RCP++HA+CHWCLRPGH+AL C++ + F+
Sbjct:    1 MAAITMSSAEEWRLFPPPLKPAPLSVGDEVFVRTKSAKEVGKKGVVCAIEKVEATPVVAPAATSEPAELSRGYHDPEGSNNCYSAEPPGGVAGAHSRTSSCDFAG-TTIWRNVDRQEKNPKKGKKFEDTRAVIRLPPRAGSPGNPPDYRARPSRLVRIYRSPPADRSTA--AXXXXXXXXLLTADTASFRLLAASQVRACDAVLEVGCSTGETTAILAKYVPKGRVVALDVGADMVERTKERLKLVSSES-EICADVAVHKMDPFLDPRGAVEAAEHETEAGIGKDGGDASRPTKGGG------------VDAVFIDIGGNREVRGVVRMIAFARTAFAQPPRLIVVKSQELVDELKASSNAVGNAGDDGATTPAATVSEAGSYAECGRISEGDLWFRELLARSTSARPSFNENTEGGGGDASSGCSNRTTPKHFHPNKAPLRLSPKDGVTPICRYYNYHKEGCKKGGRCPFDHAVCHWCLRPGHIALSCENANGFN 481          
BLAST of mRNA_L-elsbetiae_contig1919.5665.1 vs. uniprot
Match: A0A7S2LZT0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LZT0_9STRA)

HSP 1 Score: 178 bits (451), Expect = 3.590e-46
Identity = 149/506 (29.45%), Postives = 210/506 (41.50%), Query Frame = 3
Query:   54 EWRLFP------PPVKQAPPTVGDKVFVRTKSAKEVGKKGVVFAFEKVEAPAVPPLRRGDLAEGPSKEVASGCGNXXXXXXXDVDGRST--VWREVKKXXXXXXAKKWEDTRALIRISRGAEGENLSDC--------RARPSRLVPIFDVPAVARSTGLVTAVGAPLLVLLTAETIPYRLLAASQVRPNDRVLEVGCSTGETTAVLVKY-----------------VPQGHVVALDVGADMVERTKERLALAKSESGRTCAR--------VRVTKVDPFLDPRGAVEAASALIRPDGEDEPTDGQTDTEKISAGESRTVDAVFIDIGGNREVRGVARMIAFARTAFSTP-PRLIVVKSQGLVAELTA--NHSGAGPKADSAVKCQRQSGKIVEGDSWFRELLARSTTVASASGGSIEDRETDSQGTGKHDIPKHFHPNRAPLRLSPKDGATPICRYHNYHREGCKK----------------GERCPYEHAICHWCLRPGHVALVC 1391
            +WR++P         ++  P +   V VR KSAKE+G  G + +                                      +   +ST  V+   +        K  ED R  I+       E   DC          RPSRLVP++D+              A  LVLLT +T  YR LA S +RPND VLE+GCSTGE TA+L++                  V  G++V  D GA ++++   RL    ++S  T A         +++ +VD   DP+GA   A++     G                        V IDIGGNR++  V RMI + +TAF    PRLI+VKS+ L  EL+     S      DS+V      G I  G +WF  L + S          + D+E     + +  + ++ HP + PL LSPK    PICRYHNYH +GC K                  +C Y+H  CHWC   GH+A+ C
Sbjct:   11 QWRVYPLLGGFNNAQRKFEPKISGAVHVRPKSAKEIGYTGRITSI-------------------------------------NTKAKSTTHVYSATELHVSQKKRKLTEDMRVTIQQHCYHHTEKYEDCITCHSTKHDVRPSRLVPVYDLHLKNNKIDK----DAESLVLLTPDTTTYRQLATSHLRPNDYVLEIGCSTGECTALLLRRNLLLQSQNLRQIEQHNNVVLGNIVGFDTGAKILKQADNRLRREYNQSATTLATDDDAYSKLIQLHRVDALADPKGAYALATSNNTCPG-----------------------MVLIDIGGNRQLESVVRMIQWVQTAFKDERPRLILVKSEALENELSTALRSSHTDDNNDSSVPSVTDEGTITNGQNWFNSLESPSI---------VADKEAGKCLSRQQLLSRYSHPKKVPLVLSPK--GIPICRYHNYHPDGCTKFIKSKSTGTVADEDEDDLQCQYDHEYCHWCQDAGHIAVNC 441          
BLAST of mRNA_L-elsbetiae_contig1919.5665.1 vs. uniprot
Match: B8BWX1_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWX1_THAPS)

HSP 1 Score: 166 bits (421), Expect = 7.120e-42
Identity = 119/343 (34.69%), Postives = 163/343 (47.52%), Query Frame = 3
Query:  525 ETIPYRLLAASQVRPNDRVLEVGCSTGETTAVLVKYV----------------------------PQGHVVALDVGADMVERTKERL------ALAKSESGRTCAR------VRVTKVDPFLDPRGAVEAASALIRPDGEDEPTDGQTDTEKISAGESRTV-DAVFIDIGGNREVRGVARMIAFARTAF-STPPRLIVVKSQGLVAELTANHSGAGPKADSAVKCQRQ---SGKIVEGDSWFRELLAR---STTVASASGGSIEDRETDSQGTGKHDIPKHFHPNRAPLRLSPKDGATPICRYHNYHREGCKK------GERCPYEHAICHWCLRPGHVALVC 1391
            +T  YR LA S +R  D VLE+GCSTGE TA++++ +                            P+G VV  D G DM+++T++RL       L K  S +  A       + + KVD F DP+GA                         ++ G S T  D + IDIGGNRE++GV  MI + +TAF   P R+I+VKS+ LV +L  +       A   +  + Q    G +  G  W   L +     T + +AS       E  S G      PK+ HP +APL LSPKD  TPICR+HNY + GCK+       E+CP++H  CHWC   GHVAL C
Sbjct:  140 DTTNYRQLATSHLRHGDSVLEIGCSTGECTALILRRLVLFHLHEMRQXXXXXXXXXXPNDEVVTTPKGRVVGFDTGGDMIQQTQQRLHAELEHLLPKDTSVQLNASEAYSQLINLHKVDAFADPKGA-----------------------HSMAVGSSNTSPDVILIDIGGNRELKGVVNMIHWVQTAFMQQPARVIIVKSESLVEKLEQHTVKDKGNAILNINTKPQVLKDGVVENGQEWLTLLHSSYKADTLLLTASA------ENTSSGQLP---PKYSHPLKAPLVLSPKDDQTPICRFHNYGKHGCKRISNNNENEKCPFDHEHCHWCRNVGHVALSC 450          
BLAST of mRNA_L-elsbetiae_contig1919.5665.1 vs. uniprot
Match: A0A7S3V7C4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V7C4_9STRA)

HSP 1 Score: 162 bits (411), Expect = 1.200e-40
Identity = 134/491 (27.29%), Postives = 215/491 (43.79%), Query Frame = 3
Query:   51 AEWRLFPPPVKQAPPTVGDKVFVRTKSAKEVGKKGVVFAFEKVEAPAVPPLRRGDLAEGPSKEVASGCGNXXXXXXXDVDGRSTVWREVKKXXXXXXAKKWEDTRALIRISRGAEGENLSDCRA----------RPSRLVPIFDVPAVARSTGLVTAVGAPLLVLLTAETIPYRLLAASQVRPNDRVLEVGCSTGETTAVLVKYVPQGHVVALDVGADMVERTKERLALA-----------KSESGRTCAR---VRVTKVDPFLDPRGAVEAASALIRPDGEDEPTDGQTDTEKISAGESRTVDAVFIDIGGNREVRGVARMIAFARTAFSTPPRLIVVKSQGLVAELTA------NHSGAGPKADSAVKCQR--------------QSGKIVEGDSWFRELLARSTTVASASGGSIEDRETDSQGTGKHDIPKHFHPNRAPLRLSPKDGATPICRYHNYHREGCKKGERCPYEHAICHWCLRPGHVALVC 1391
            ++W ++PPP   +    G  V++R+KS K++G++G    F K+       L   +  E   K   +                S  W   +        K+ ++ R +   S  A  + + D  +          RP+ ++PI+      +             ++LT  T  YR LAASQ+  ND VLE+GCS GE +  + KY+ +G  +  D+   M+   K++ +             K+E  R       V+   +DPF DP+ A + A+ +          D + +   I   E +    +FIDIGGNRE+  VARMI++A+  F+  PRL ++KS+ ++  L           G G   +S +K Q+              ++G +V G+ WF  ++     V+          +T          P   HP +APL LSP     PICR+HNY  +GCKK + CP++H  CH C +PGH AL C
Sbjct:    3 SDWIVYPPPDPLSHVNNG-AVYIRSKSKKDMGRRG---HFVKL-------LDEEETTESAKKTATA------------KQSESKRWTRTRTRLVVNVLKE-KNNRNVADTSNCASKKEVVDGNSHEQAFYTATFRPASIIPIYGTRTRNK-------------IILTECTDQYRKLAASQLLENDHVLEIGCSNGECSLYIDKYLQKGTFIGFDISQKMIAEAKDKFSGRDGIPTKLEWDEKAELWRQYGDDNYVKFFTIDPFTDPQRAYKYATTI----------DSRNEDGNIKGVEIKPT-VIFIDIGGNRELDPVARMISWAKENFN--PRLCIIKSEAMMQNLNECQEKYRQSGGLGEGKESKLKRQKLDKEQKSRANVAVKKNGVVVNGEDWFENIVKNPNDVS----------DTVGVRCNPCTAPGFIHPLKAPLSLSPITN-QPICRFHNYAEKGCKKKDACPFDHIHCHLCKKPGHRALDC 432          
BLAST of mRNA_L-elsbetiae_contig1919.5665.1 vs. uniprot
Match: A0A1Z5J8X0_FISSO (C3H1-type domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J8X0_FISSO)

HSP 1 Score: 142 bits (358), Expect = 1.130e-34
Identity = 109/321 (33.96%), Postives = 153/321 (47.66%), Query Frame = 3
Query:  429 SRLVPIFDVPAVARSTGLVTAVGAPLLVLLTAETIPYRLLAASQVRPNDRVLEVGCSTGETTAVLVKYVPQGHVVALDVGADMVERTKERLALAKSESGRTCARVRVTKVDPFLDPRGAVEAASALIRPDGEDEPTDGQTDTEKISAGESRTVDAVFIDIGGNREVRGVARMIAFARTAFSTPPRLIVVKSQGLVAELTANHSGAGPKADSAVKCQRQSGKIVEGDSWFRELLARSTTVASASGGSIEDRETDSQGTGKHDIPKHFHPNRAPLRLSPKDGATPICRYHNYHREGCKKGERCPYEHAICHWCLRPGHVALVC 1391
            +R++PI    + +++          L V++TAET  YR LA SQV   D VLE+GCSTGET+ VL K       V  D  A+M ERT        S++  +C R+   K++  L+P  A +                                 AV++DIGGNRE+ GVARM+ +  TA     +LIVVKS+ L  EL++                  S  I++ D    E L +              +  DS+      +P+H  P +AP   SP D + PICRYHNYH++GC+KG  CP++H  CH CL  GHVA+ C
Sbjct:   31 NRMIPILSSSSSSKTENHHEKDNDTLSVIITAETKYYRQLATSQVCSPDTVLEIGCSTGETSKVLWKRASSW--VGFDTSAEMTERTM-------SKNTSSCRRL-CQKMNALLEPALAYQTVHQ-----------------------HQPVTTAVWMDIGGNREMNGVARMLHWILTAPFPALQLIVVKSKELARELSS--------------IPVDSKGILQMDGM--EFLNK--------------KRLDSRR-----LPRH--PQQAPKVYSPIDPSLPICRYHNYHKKGCRKGSDCPFDHVHCHMCLEAGHVAMSC 281          
BLAST of mRNA_L-elsbetiae_contig1919.5665.1 vs. uniprot
Match: A0A7S4KYP7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4KYP7_9EUKA)

HSP 1 Score: 135 bits (341), Expect = 8.100e-34
Identity = 73/160 (45.62%), Postives = 87/160 (54.37%), Query Frame = 3
Query:  897 FIDIGGNREVRGVARMIAFARTAFSTPPRLIVVKSQGLVAELTANHSGAGPKADSAVKCQRQSGKIVEGDSWFRELLARSTTVASASGGSIEDRETDSQGTGKHD---IPKHFHPNRAPLRLSPKDGATPICRYHNYHREGCKKGERCPYEHAICHWCLR 1367
            FIDIGGNRE+ GV RMI F RTAF+ PPRLI+VKS+ ++AEL   H       D           I  GDSWF+ELLA+               E    G GK     +P++F P  A +R  P     PICR+HNYH  GC K   CPY H ICHWCL+
Sbjct:   25 FIDIGGNRELDGVTRMIRFVRTAFTPPPRLIIVKSKAMIAELKKTHGSMASCLDV----------IENGDSWFQELLAK---------------EGSPHGEGKPTEKRLPRYFRPLEAAMRKDP--AGVPICRFHNYHPSGCLKSANCPYNHNICHWCLK 157          
BLAST of mRNA_L-elsbetiae_contig1919.5665.1 vs. uniprot
Match: A0A1Z5K7X1_FISSO (C3H1-type domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K7X1_FISSO)

HSP 1 Score: 139 bits (351), Expect = 3.400e-33
Identity = 102/321 (31.78%), Postives = 145/321 (45.17%), Query Frame = 3
Query:  429 SRLVPIFDVPAVARSTGLVTAVGAPLLVLLTAETIPYRLLAASQVRPNDRVLEVGCSTGETTAVLVKYVPQGHVVALDVGADMVERTKERLALAKSESGRTCARVRVTKVDPFLDPRGAVEAASALIRPDGEDEPTDGQTDTEKISAGESRTVDAVFIDIGGNREVRGVARMIAFARTAFSTPPRLIVVKSQGLVAELTANHSGAGPKADSAVKCQRQSGKIVEGDSWFRELLARSTTVASASGGSIEDRETDSQGTGKHDIPKHFHPNRAPLRLSPKDGATPICRYHNYHREGCKKGERCPYEHAICHWCLRPGHVALVC 1391
            +R++PI   P              PL +++TA T  YR LAASQ+ P D VLE+GCSTGET+ ++  +      +  D  A+M ERT        S+   +C RV   K++   +P  A +                                 AV++DIGGNR++ GVARM+ +  T+     RLIVVKS+ LV EL            S+V    +    ++G  +  +                              +P+H  P +AP   SP D + PICRYHNYH++GC KG  CP++H  CH CL  GHVA+ C
Sbjct:   86 NRMIPILSFPKTENHEK------DPLSIIITAATKHYRQLAASQLCPQDAVLEIGCSTGETSEII--WNRASSWIGWDTSAEMTERTM-------SKHSSSCHRV-CQKMNALSEPALAYQTVHQ-----------------------HQPATTAVWMDIGGNRDMNGVARMLHWILTSPFPALRLIVVKSEELVREL------------SSVPVNSEGILQMDGMEFLNQKRLEFCR-----------------------LPRH--PQQAPKVYSPTDPSLPICRYHNYHKKGCGKGSDCPFDHVHCHMCLEAGHVAMNC 330          
BLAST of mRNA_L-elsbetiae_contig1919.5665.1 vs. uniprot
Match: B7G665_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G665_PHATC)

HSP 1 Score: 125 bits (313), Expect = 1.100e-27
Identity = 102/341 (29.91%), Postives = 143/341 (41.94%), Query Frame = 3
Query:  399 ENLSDCRARPSRLVPIFDVPAVARSTGLVTAVGAPLLVLLTAETIPYRLLAASQVRPNDRVLEVGCSTGETTAVLVKYVPQGHVVALDVGADMVERTKERLALAKSESGRTCARVRVTKVDPFLDPRGAVEAASALIRPDGEDEPTDGQTDTEKISAGESRTVDAVFIDIGGNREVRGVARMIAFARTAF----------STPPRLIVVKSQGLVAELTANHSGAGPKADSAVKCQRQSGKIVEGDSWFRELLARSTTVASASGGSIEDRETDSQGTGKHDIPKHFHPNRAPLRLSPKDGATPICRYHNYHREGCKKGERCPYEHAICHWCLRPGHVALVC 1391
            ++L+DC    S+L+P+             TA    LLV +  +T  +R  A +   P DRVLE+GCSTG+T+    K      V  +D  +DMV+RT+  L    + +G   A  RV   D  L P  A                        ++ A +      VF+DIGGNR + GV  M+ +  T              P RL++VKSQ L   L+  H+        +      S +      WF + L ++ T                       +P+H  P +A L  SP     PICRYHNY    C+K E CP +H  CH C RPGH+AL C
Sbjct:   90 KSLTDC----SKLLPL-------------TASFGSLLVRVVPDTASFRHWAVAWSGPTDRVLEIGCSTGQTSRAFWKARVSSWV-GMDTSSDMVQRTRIALQQQDTATGSARANYRVCHCDALLHPNQA------------------------ELEARQFGPPTLVFVDIGGNRNLSGVVLMLDWVLTRSVGVEKRSSGERQPTRLVLVKSQALARALSLFHTDNNRTLPESPNENLASQEFCR--RWFEDQLRQAQTAT---------------------LPRH--PLQASLVYSPISATQPICRYHNY--STCQKVETCPLDHRHCHLCQRPGHIALRC 361          
BLAST of mRNA_L-elsbetiae_contig1919.5665.1 vs. uniprot
Match: A0A7S2E4J6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E4J6_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.590e-25
Identity = 74/250 (29.60%), Postives = 114/250 (45.60%), Query Frame = 3
Query:  834 TDGQTDTEKISAGESRTVDAVFIDIGGNREVRGVARMIAFARTAFSTPPRLIVVKSQGLVAELTANHSGAGP----------------------------------------------------KADSAVKCQR-----QSGKIVEGDSWFRELLARSTTVA-SASGGSIEDRETDSQGTG---KHDIPKHFHPNRAPLRLSPKDGATPICRYHNYHREGCKK---GERCPYEHAICHWCLRPGHVALVC 1391
            T+   +T   S+      + +FIDIGGNR +  V +MI + +  FS  PR+IVVKS+ LV E+    +G                                                       K ++  K  +     ++G+I +G+ WF++L+ +      + +  S    +TD + T    +   P + HP +AP+  SP D + PICRYHNYH++GCK+    E CP +H  CHWCL+PGH+AL C
Sbjct:    2 TNANKNTPSSSSPPPSPPNCIFIDIGGNRALHSVVQMITWVQNEFS--PRIIVVKSEELVEEIVGKDNGEEERYLKKKMKRMKVKAKNKDTVPDQFQQEAKKRKVNDESIHGCTKEQQQQHDHCKTETCKKTMKNVHVLKNGQIQKGNEWFKKLVHQCMEEHDNTNHDSSTTTKTDERSTSINTQQQQPYYIHPLKAPITYSPTDASKPICRYHNYHKDGCKRYKTDESCPLDHTFCHWCLQPGHIALDC 249          
BLAST of mRNA_L-elsbetiae_contig1919.5665.1 vs. uniprot
Match: K0RTZ8_THAOC (Uncharacterized protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RTZ8_THAOC)

HSP 1 Score: 116 bits (291), Expect = 6.960e-25
Identity = 98/290 (33.79%), Postives = 138/290 (47.59%), Query Frame = 3
Query:  354 EDTRALIRISRGAEGENLSD--CRA----RPSRLVPIFDVPAVARSTGLVTAVGAPLLVLLTAETIPYRLLAASQVRPNDRVLEVGCSTGETTAVLVKYVPQGH-----------------VVALDVGADMVERTKERL-----ALAKSESGRTCARVRVTKVDPFLDPRG-AVEAASALIRPDGEDEPTDGQTDTEKISAGESRTVDAVFIDIGGNREVRGVARMIAFARTAFST-PPRLIVVKSQGLVAEL-TANHSGAGPKADSAVKCQRQSGKIVEGDSWFRELLA 1130
            EDTR  IR      G+  ++  CR+    RPSRL P+FD     +S+  V         +LT +T+ YRLLAAS VR  DRVLE+GCSTGE TA++++ +   H                 V+A D   +++++ + R+     +LAK+  GR    V++   D  +D +G A+  AS            DG            R  D V +DIGGNRE+ GV RMI + + +F   PPRLI+VKS+ LV  L  A   G              +G I  G  WF  L +
Sbjct:   99 EDTRVSIRPHCFLSGDFDAEKYCRSKEDVRPSRLFPVFDAAGDGKSSTTV---------VLTPDTVSYRLLAASHVRVADRVLEIGCSTGECTALVLRRLVLLHQQRMRIEASQDLQFLGGVIAFDTSNEIIDKARRRIGDEYGSLAKT--GRVEDIVKLYNCDALMDTKGRAISLAS------------DG-----------GRYPDVVLVDIGGNRELHGVVRMINWVKVSFQRRPPRLIIVKSEALVESLHEAEQQGDEGDEFQPKSSVLSNGVIQNGQEWFDSLTS 354          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1919.5665.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LUD1_ECTSI4.720e-15255.73C3H1-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A7S2LZT0_9STRA3.590e-4629.45Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
B8BWX1_THAPS7.120e-4234.69Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S3V7C4_9STRA1.200e-4027.29Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A1Z5J8X0_FISSO1.130e-3433.96C3H1-type domain-containing protein n=1 Tax=Fistul... [more]
A0A7S4KYP7_9EUKA8.100e-3445.63Hypothetical protein (Fragment) n=1 Tax=Paramoeba ... [more]
A0A1Z5K7X1_FISSO3.400e-3331.78C3H1-type domain-containing protein n=1 Tax=Fistul... [more]
B7G665_PHATC1.100e-2729.91Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S2E4J6_9STRA1.590e-2529.60Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
K0RTZ8_THAOC6.960e-2533.79Uncharacterized protein n=2 Tax=Thalassiosira ocea... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1919contigL-elsbetiae_contig1919:898..2643 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score460.7
Seed ortholog evalue8.2e-127
Seed eggNOG ortholog2880.D8LUD1
Hectar predicted targeting categoryother localisation
EggNOG OGs2E3GK@1,2SAJ2@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-14_004520.1
Exons1
Model size1746
Cds size1401
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1919.5665.1prot_L-elsbetiae_contig1919.5665.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1919 921..2321 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815796.5896456-UTR-L-elsbetiae_contig1919:897..9201622815796.5896456-UTR-L-elsbetiae_contig1919:897..920Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1919 898..920 +
1691683108.6191952-UTR-L-elsbetiae_contig1919:897..9201691683108.6191952-UTR-L-elsbetiae_contig1919:897..920Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1919 898..920 +
1622815796.611132-UTR-L-elsbetiae_contig1919:2321..26431622815796.611132-UTR-L-elsbetiae_contig1919:2321..2643Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1919 2322..2643 +
1691683108.6403444-UTR-L-elsbetiae_contig1919:2321..26431691683108.6403444-UTR-L-elsbetiae_contig1919:2321..2643Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1919 2322..2643 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815796.600704-CDS-L-elsbetiae_contig1919:920..23211622815796.600704-CDS-L-elsbetiae_contig1919:920..2321Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1919 921..2321 +
1691683108.630641-CDS-L-elsbetiae_contig1919:920..23211691683108.630641-CDS-L-elsbetiae_contig1919:920..2321Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1919 921..2321 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1919.5665.1

>prot_L-elsbetiae_contig1919.5665.1 ID=prot_L-elsbetiae_contig1919.5665.1|Name=mRNA_L-elsbetiae_contig1919.5665.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=467bp
MSTIPMSSGAEWRLFPPPVKQAPPTVGDKVFVRTKSAKEVGKKGVVFAFE
KVEAPAVPPLRRGDLAEGPSKEVASGCGNGGGGGNGDVDGRSTVWREVKK
KKKKKKAKKWEDTRALIRISRGAEGENLSDCRARPSRLVPIFDVPAVARS
TGLVTAVGAPLLVLLTAETIPYRLLAASQVRPNDRVLEVGCSTGETTAVL
VKYVPQGHVVALDVGADMVERTKERLALAKSESGRTCARVRVTKVDPFLD
PRGAVEAASALIRPDGEDEPTDGQTDTEKISAGESRTVDAVFIDIGGNRE
VRGVARMIAFARTAFSTPPRLIVVKSQGLVAELTANHSGAGPKADSAVKC
QRQSGKIVEGDSWFRELLARSTTVASASGGSIEDRETDSQGTGKHDIPKH
FHPNRAPLRLSPKDGATPICRYHNYHREGCKKGERCPYEHAICHWCLRPG
HVALVCDDPSEFSALG*
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mRNA from alignment at L-elsbetiae_contig1919:898..2643+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1919.5665.1 ID=mRNA_L-elsbetiae_contig1919.5665.1|Name=mRNA_L-elsbetiae_contig1919.5665.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1746bp|location=Sequence derived from alignment at L-elsbetiae_contig1919:898..2643+ (Laminarionema elsbetiae ELsaHSoW15)
CAGGAGCAGTGGGACAAACTCAGATGTCCACCATTCCCATGAGCAGTGGC GCAGAGTGGAGGTTGTTCCCCCCACCCGTGAAGCAGGCCCCGCCTACTGT CGGCGACAAGGTTTTCGTCCGGACGAAGTCGGCCAAGGAGGTCGGGAAAA AGGGGGTGGTTTTCGCATTTGAGAAGGTGGAGGCCCCGGCTGTCCCCCCC CTGAGACGAGGCGATTTGGCCGAGGGACCCTCGAAGGAGGTCGCCAGCGG CTGCGGCAATGGCGGCGGCGGCGGCAATGGCGACGTTGATGGCAGGTCCA CCGTCTGGAGAGAAGTCAAGAAGAAGAAGAAGAAAAAAAAAGCGAAGAAG TGGGAAGATACGAGGGCGTTGATTCGGATATCGCGCGGCGCCGAAGGCGA GAATCTATCCGACTGCCGCGCCCGTCCGTCGAGGTTGGTGCCAATCTTCG ACGTACCAGCAGTTGCCAGATCAACGGGGCTCGTTACTGCTGTTGGCGCC CCGCTCCTCGTTCTCCTCACGGCGGAGACGATCCCTTACCGCCTCCTCGC GGCTTCGCAAGTCCGCCCGAACGACAGAGTACTGGAAGTGGGATGCTCAA CGGGGGAGACAACCGCAGTCCTAGTCAAATACGTGCCCCAGGGGCACGTG GTGGCTCTGGATGTCGGGGCTGACATGGTTGAACGAACGAAGGAGAGACT CGCGCTGGCAAAGTCGGAAAGCGGTAGAACATGCGCCAGGGTTAGGGTAA CCAAGGTTGATCCTTTTTTGGATCCACGAGGTGCGGTCGAGGCCGCGTCG GCTCTCATCAGGCCGGACGGGGAGGATGAGCCGACGGACGGGCAGACAGA TACGGAGAAAATCAGCGCTGGCGAGAGTCGCACGGTAGATGCTGTGTTTA TCGACATTGGAGGCAACCGCGAAGTGCGGGGTGTCGCGCGGATGATCGCT TTTGCCCGGACCGCATTTTCAACACCTCCAAGGCTGATCGTCGTCAAGAG CCAAGGATTGGTCGCGGAGCTGACGGCAAACCACAGCGGTGCCGGCCCAA AAGCAGATAGCGCAGTAAAGTGCCAAAGACAGAGCGGAAAAATAGTGGAG GGCGACTCGTGGTTTCGCGAGCTGCTTGCGCGAAGCACTACGGTGGCTTC AGCGAGCGGTGGAAGCATAGAGGATCGAGAAACAGATTCACAGGGCACCG GCAAGCACGACATACCGAAGCACTTCCACCCCAACAGGGCCCCGTTGCGT CTGTCTCCGAAGGACGGCGCCACGCCGATTTGCCGGTACCATAATTATCA TCGGGAGGGTTGCAAGAAGGGCGAGAGGTGCCCATATGAACACGCAATCT GCCACTGGTGCCTCCGACCGGGTCACGTGGCGCTAGTTTGCGATGACCCC AGTGAATTCAGCGCACTGGGTTGAAGAGTCATACAGTAGTGTAGTCGAAG TCTGCCGGCGTTAGTTCGCTCTTGTGCGCGTCCACTGAGCACCCACTCTC TCAGTTCTCGATTCGCGTTTTGTTTCTTCCTTGTGCCGGATCATTGCGTC AGAGGACACTCTTAGGTTGTTTGTTGTGGTGTTGAACTGCAAACCCTATA TGGCAGCGAGAGCTCACAGCGTGTGCGATTCGAGATGCTGCTGTAAGAGA GAGAAGATACCGTCCGTAGTCTACCGTATTGGGTGATCATTTATTTATTA TGAGCGATGAGAGATGTCCCAAAACGGGTACGCCCGGAGATAAACT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1919:898..2643+

>mRNA_L-elsbetiae_contig1919.5665.1 ID=mRNA_L-elsbetiae_contig1919.5665.1|Name=mRNA_L-elsbetiae_contig1919.5665.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2802bp|location=Sequence derived from alignment at L-elsbetiae_contig1919:898..2643+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCCACCATTCCCATGAGCAGTGGCGCAGAGTGGAGGTTGTTCCCCCC
ACCCGTGAAGCAGGCCCCGCCTACTGTCGGCGACAAGGTTTTCGTCCGGA
CGAAGTCGGCCAAGGAGGTCGGGAAAAAGGGGGTGGTTTTCGCATTTGAG
AAGGTGGAGGCCCCGGCTGTCCCCCCCCTGAGACGAGGCGATTTGGCCGA
GGGACCCTCGAAGGAGGTCGCCAGCGGCTGCGGCAATGGCGGCGGCGGCG
GCAATGGCGACGTTGATGGCAGGTCCACCGTCTGGAGAGAAGTCAAGAAG
AAGAAGAAGAAAAAAAAAGCGAAGAAGTGGGAAGATACGAGGGCGTTGAT
TCGGATATCGCGCGGCGCCGAAGGCGAGAATCTATCCGACTGCCGCGCCC
GTCCGTCGAGGTTGGTGCCAATCTTCGACGTACCAGCAGTTGCCAGATCA
ACGGGGCTCGTTACTGCTGTTGGCGCCCCGCTCCTCGTTCTCCTCACGGC
GGAGACGATCCCTTACCGCCTCCTCGCGGCTTCGCAAGTCCGCCCGAACG
ACAGAGTACTGGAAGTGGGATGCTCAACGGGGGAGACAACCGCAGTCCTA
GTCAAATACGTGCCCCAGGGGCACGTGGTGGCTCTGGATGTCGGGGCTGA
CATGGTTGAACGAACGAAGGAGAGACTCGCGCTGGCAAAGTCGGAAAGCG
GTAGAACATGCGCCAGGGTTAGGGTAACCAAGGTTGATCCTTTTTTGGAT
CCACGAGGTGCGGTCGAGGCCGCGTCGGCTCTCATCAGGCCGGACGGGGA
GGATGAGCCGACGGACGGGCAGACAGATACGGAGAAAATCAGCGCTGGCG
AGAGTCGCACGGTAGATGCTGTGTTTATCGACATTGGAGGCAACCGCGAA
GTGCGGGGTGTCGCGCGGATGATCGCTTTTGCCCGGACCGCATTTTCAAC
ACCTCCAAGGCTGATCGTCGTCAAGAGCCAAGGATTGGTCGCGGAGCTGA
CGGCAAACCACAGCGGTGCCGGCCCAAAAGCAGATAGCGCAGTAAAGTGC
CAAAGACAGAGCGGAAAAATAGTGGAGGGCGACTCGTGGTTTCGCGAGCT
GCTTGCGCGAAGCACTACGGTGGCTTCAGCGAGCGGTGGAAGCATAGAGG
ATCGAGAAACAGATTCACAGGGCACCGGCAAGCACGACATACCGAAGCAC
TTCCACCCCAACAGGGCCCCGTTGCGTCTGTCTCCGAAGGACGGCGCCAC
GCCGATTTGCCGGTACCATAATTATCATCGGGAGGGTTGCAAGAAGGGCG
AGAGGTGCCCATATGAACACGCAATCTGCCACTGGTGCCTCCGACCGGGT
CACGTGGCGCTAGTTTGCGATGACCCCAGTGAATTCAGCGCACTGGGTTG
AATGTCCACCATTCCCATGAGCAGTGGCGCAGAGTGGAGGTTGTTCCCCC
CACCCGTGAAGCAGGCCCCGCCTACTGTCGGCGACAAGGTTTTCGTCCGG
ACGAAGTCGGCCAAGGAGGTCGGGAAAAAGGGGGTGGTTTTCGCATTTGA
GAAGGTGGAGGCCCCGGCTGTCCCCCCCCTGAGACGAGGCGATTTGGCCG
AGGGACCCTCGAAGGAGGTCGCCAGCGGCTGCGGCAATGGCGGCGGCGGC
GGCAATGGCGACGTTGATGGCAGGTCCACCGTCTGGAGAGAAGTCAAGAA
GAAGAAGAAGAAAAAAAAAGCGAAGAAGTGGGAAGATACGAGGGCGTTGA
TTCGGATATCGCGCGGCGCCGAAGGCGAGAATCTATCCGACTGCCGCGCC
CGTCCGTCGAGGTTGGTGCCAATCTTCGACGTACCAGCAGTTGCCAGATC
AACGGGGCTCGTTACTGCTGTTGGCGCCCCGCTCCTCGTTCTCCTCACGG
CGGAGACGATCCCTTACCGCCTCCTCGCGGCTTCGCAAGTCCGCCCGAAC
GACAGAGTACTGGAAGTGGGATGCTCAACGGGGGAGACAACCGCAGTCCT
AGTCAAATACGTGCCCCAGGGGCACGTGGTGGCTCTGGATGTCGGGGCTG
ACATGGTTGAACGAACGAAGGAGAGACTCGCGCTGGCAAAGTCGGAAAGC
GGTAGAACATGCGCCAGGGTTAGGGTAACCAAGGTTGATCCTTTTTTGGA
TCCACGAGGTGCGGTCGAGGCCGCGTCGGCTCTCATCAGGCCGGACGGGG
AGGATGAGCCGACGGACGGGCAGACAGATACGGAGAAAATCAGCGCTGGC
GAGAGTCGCACGGTAGATGCTGTGTTTATCGACATTGGAGGCAACCGCGA
AGTGCGGGGTGTCGCGCGGATGATCGCTTTTGCCCGGACCGCATTTTCAA
CACCTCCAAGGCTGATCGTCGTCAAGAGCCAAGGATTGGTCGCGGAGCTG
ACGGCAAACCACAGCGGTGCCGGCCCAAAAGCAGATAGCGCAGTAAAGTG
CCAAAGACAGAGCGGAAAAATAGTGGAGGGCGACTCGTGGTTTCGCGAGC
TGCTTGCGCGAAGCACTACGGTGGCTTCAGCGAGCGGTGGAAGCATAGAG
GATCGAGAAACAGATTCACAGGGCACCGGCAAGCACGACATACCGAAGCA
CTTCCACCCCAACAGGGCCCCGTTGCGTCTGTCTCCGAAGGACGGCGCCA
CGCCGATTTGCCGGTACCATAATTATCATCGGGAGGGTTGCAAGAAGGGC
GAGAGGTGCCCATATGAACACGCAATCTGCCACTGGTGCCTCCGACCGGG
TCACGTGGCGCTAGTTTGCGATGACCCCAGTGAATTCAGCGCACTGGGTT
GA
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