Homology
BLAST of mRNA_L-elsbetiae_contig19146.5652.1 vs. uniprot
Match:
D7FQP0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP0_ECTSI)
HSP 1 Score: 296 bits (758), Expect = 3.190e-96
Identity = 144/197 (73.10%), Postives = 165/197 (83.76%), Query Frame = 1
Query: 10 PTKVPTEIKKGLAFFPGAVIVQTFSEGEREHIEPRLTFQRAYDSVDILSNGRPVEGGIDLDKAPVLAGVIDEMTGLVGVRPDCVHVTTREGGQIHTSHSDKMKFDVRGTVHLGADVLLGGQVDSTKSTGDFVLSSGGLLQPLQLRMRSGDAYIATAKVLHAPFLHGISPPDQASLSIVSTWSPGRGAFNLFRSKSRP 600
PT VPT +K GLAF+ GAV V TF+EGER+HIE L+FQRAYDSVDILS G+PV+GG+DL APV+AG I MT LVGVR DC H+TTRE Q+HTSHSD+MKFDVRGTVHLGADVLL GQVD +STGDF+LS G L QPL + MRSGDAYIAT++VL+AP HGISPPDQASLS+V TWSPGRGAFN +RS+S P
Sbjct: 50 PTGVPTRVKNGLAFYRGAVSVPTFTEGERQHIESHLSFQRAYDSVDILSRGKPVDGGVDLALAPVVAGAIATMTDLVGVRSDCAHLTTREKEQLHTSHSDRMKFDVRGTVHLGADVLLHGQVDPARSTGDFILSGGDLPQPLIMPMRSGDAYIATSEVLYAPLFHGISPPDQASLSVVCTWSPGRGAFNPWRSQSHP 246
BLAST of mRNA_L-elsbetiae_contig19146.5652.1 vs. uniprot
Match:
A0A6H5KC74_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC74_9PHAE)
HSP 1 Score: 279 bits (713), Expect = 1.640e-88
Identity = 145/198 (73.23%), Postives = 158/198 (79.80%), Query Frame = 1
Query: 7 TPTKVPTEIKKGLAFFPGAVIVQTFSEGEREHIEPRLTFQRAYDSVDILSNGRPVEGGIDLDKAPVLAGVIDEMTGLVGVRPDCVHVTTREGGQIHTSHSDKMKFDVRGTVHLGADVLLGGQVDSTKSTGDFVLSSGGLLQPLQLRMRSGDAYIATAKVLHAPFLHGISPPDQASLSIVSTWSPGRGAFNLFRSKSRP 600
T T VPT++K GLAFF GAV VQTFSE ER HIE RLTFQRAYDSVDILSNG+PV+GGI L+KAPVLA +ID+MT LVGV PD VH+TTREGGQIH SHSDKM+FDVR TVHLG DVLL GQVD KSTGDFVLS L Q L L+MRSGD YIAT VLHAP+L GI PP QASLS+VS W R F+ FR K RP
Sbjct: 251 TQTTVPTKVKNGLAFFRGAVSVQTFSEAERRHIESRLTFQRAYDSVDILSNGKPVDGGIGLEKAPVLACLIDKMTDLVGVPPDGVHMTTREGGQIHMSHSDKMQFDVRSTVHLGKDVLLDGQVDPAKSTGDFVLSGRDLSQSLLLQMRSGDPYIATDNVLHAPYLQGIRPPGQASLSLVSAW---RRVFHPFRPKFRP 445
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19146.5652.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 2
0 1 Expect = 3.19e-96 / Id = 73.10 Expect = 1.64e-88 / Id = 73.23 Sequence D7FQP0_ECTSI A0A6H5KC74_9PHAE
Match Name E-value Identity Description
D7FQP0_ECTSI 3.190e-96 73.10 Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5KC74_9PHAE 1.640e-88 73.23 Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Hectar predicted targeting category other localisation
Ec32 ortholog description hypothetical protein
Ec32 ortholog Ec-03_001510.1
Exons 1
Model size 602
Cds size 600
Stop 0
Start 0
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815795.567336-CDS-L-elsbetiae_contig19146:122..722 1622815795.567336-CDS-L-elsbetiae_contig19146:122..722 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig19146 123..722 +
1691683107.9204998-CDS-L-elsbetiae_contig19146:122..722 1691683107.9204998-CDS-L-elsbetiae_contig19146:122..722 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig19146 123..722 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig19146.5652.1
>prot_L-elsbetiae_contig19146.5652.1 ID=prot_L-elsbetiae_contig19146.5652.1|Name=mRNA_L-elsbetiae_contig19146.5652.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=200bp
DWTPTKVPTEIKKGLAFFPGAVIVQTFSEGEREHIEPRLTFQRAYDSVDI LSNGRPVEGGIDLDKAPVLAGVIDEMTGLVGVRPDCVHVTTREGGQIHTS HSDKMKFDVRGTVHLGADVLLGGQVDSTKSTGDFVLSSGGLLQPLQLRMR SGDAYIATAKVLHAPFLHGISPPDQASLSIVSTWSPGRGAFNLFRSKSRP back to top mRNA from alignment at L-elsbetiae_contig19146:123..723+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig19146.5652.1 ID=mRNA_L-elsbetiae_contig19146.5652.1|Name=mRNA_L-elsbetiae_contig19146.5652.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=601bp|location=Sequence derived from alignment at L-elsbetiae_contig19146:123..723+ (Laminarionema elsbetiae ELsaHSoW15)GATTGGACACCAACAAAAGTGCCGACCGAGATCAAGAAGGGCCTGGCGTT
CTTCCCGGGTGCGGTGATCGTACAGACGTTCAGCGAAGGGGAGCGCGAAC
ACATCGAGCCCCGACTGACGTTCCAGCGAGCATATGACAGCGTTGACATC
CTCTCCAACGGCAGGCCCGTCGAGGGAGGGATAGATCTGGACAAGGCGCC
TGTCCTAGCTGGCGTGATCGACGAGATGACCGGCCTGGTTGGCGTGCGGC
CTGACTGCGTGCACGTAACAACGCGGGAGGGCGGTCAAATCCACACATCG
CATTCGGACAAGATGAAGTTCGATGTGCGCGGCACCGTCCACCTTGGCGC
GGACGTCCTCCTTGGCGGGCAAGTAGACTCCACCAAGTCCACAGGGGACT
TCGTCCTCAGCAGCGGCGGCCTGTTGCAGCCCCTTCAACTTCGGATGCGG
AGTGGGGACGCGTACATCGCCACCGCCAAGGTCCTTCATGCCCCCTTCTT
GCACGGAATCAGCCCCCCGGACCAAGCAAGCCTGTCGATTGTTTCCACGT
GGTCTCCGGGACGTGGCGCCTTCAACCTCTTCCGGAGCAAGTCCCGCCCC
C back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig19146:123..723+
>mRNA_L-elsbetiae_contig19146.5652.1 ID=mRNA_L-elsbetiae_contig19146.5652.1|Name=mRNA_L-elsbetiae_contig19146.5652.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1200bp|location=Sequence derived from alignment at L-elsbetiae_contig19146:123..723+ (Laminarionema elsbetiae ELsaHSoW15) GATTGGACACCAACAAAAGTGCCGACCGAGATCAAGAAGGGCCTGGCGTT CTTCCCGGGTGCGGTGATCGTACAGACGTTCAGCGAAGGGGAGCGCGAAC ACATCGAGCCCCGACTGACGTTCCAGCGAGCATATGACAGCGTTGACATC CTCTCCAACGGCAGGCCCGTCGAGGGAGGGATAGATCTGGACAAGGCGCC TGTCCTAGCTGGCGTGATCGACGAGATGACCGGCCTGGTTGGCGTGCGGC CTGACTGCGTGCACGTAACAACGCGGGAGGGCGGTCAAATCCACACATCG CATTCGGACAAGATGAAGTTCGATGTGCGCGGCACCGTCCACCTTGGCGC GGACGTCCTCCTTGGCGGGCAAGTAGACTCCACCAAGTCCACAGGGGACT TCGTCCTCAGCAGCGGCGGCCTGTTGCAGCCCCTTCAACTTCGGATGCGG AGTGGGGACGCGTACATCGCCACCGCCAAGGTCCTTCATGCCCCCTTCTT GCACGGAATCAGCCCCCCGGACCAAGCAAGCCTGTCGATTGTTTCCACGT GGTCTCCGGGACGTGGCGCCTTCAACCTCTTCCGGAGCAAGTCCCGCCCC GATTGGACACCAACAAAAGTGCCGACCGAGATCAAGAAGGGCCTGGCGTT CTTCCCGGGTGCGGTGATCGTACAGACGTTCAGCGAAGGGGAGCGCGAAC ACATCGAGCCCCGACTGACGTTCCAGCGAGCATATGACAGCGTTGACATC CTCTCCAACGGCAGGCCCGTCGAGGGAGGGATAGATCTGGACAAGGCGCC TGTCCTAGCTGGCGTGATCGACGAGATGACCGGCCTGGTTGGCGTGCGGC CTGACTGCGTGCACGTAACAACGCGGGAGGGCGGTCAAATCCACACATCG CATTCGGACAAGATGAAGTTCGATGTGCGCGGCACCGTCCACCTTGGCGC GGACGTCCTCCTTGGCGGGCAAGTAGACTCCACCAAGTCCACAGGGGACT TCGTCCTCAGCAGCGGCGGCCTGTTGCAGCCCCTTCAACTTCGGATGCGG AGTGGGGACGCGTACATCGCCACCGCCAAGGTCCTTCATGCCCCCTTCTT GCACGGAATCAGCCCCCCGGACCAAGCAAGCCTGTCGATTGTTTCCACGT GGTCTCCGGGACGTGGCGCCTTCAACCTCTTCCGGAGCAAGTCCCGCCCC back to top