mRNA_L-elsbetiae_contig1914.5648.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1914.5648.1 vs. uniprot
Match: D8LGX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGX5_ECTSI) HSP 1 Score: 282 bits (721), Expect = 4.960e-81 Identity = 187/256 (73.05%), Postives = 208/256 (81.25%), Query Frame = 1 Query: 1330 IQALEDQLSYLEEDRRRVLLAAKEARSNRRKDDRQLKEYVHTLEVHLDQLSKEKQESETAVVETVRAETAKALEQAQQGTQAAAVKAAEEVKRARGELDAAQALLEEALRDKAAAVQEKAASDALLRTEQGKGAALEKEVERLRESTVALTQRLLDTVAEAERAGKDERDAIQARAHEATEAAVXXXXXXXREEETARCREEMEVALAEEKEELRKXMEARVATMRAGLKRRLQEARAERAGTASGIPSSERVAGV 2097 I ALE+QL+YLEEDRRR L+AKEARSNRRKDDRQLKEYVHTLEVHLDQLSKEKQESETA++E VRAET KAL+Q T AAA A EEV++AR EL+AAQALLEEAL++KA AVQEKAA DALLRTEQGK AALEKEVERL+EST LTQRLLD VA+AERA ++ERDA A+A A XXXXX REEETARCREE ALAEEKE+LRK ME R+ATMRAGLKRRLQEAR+ER GT + G+ Sbjct: 339 ILALENQLAYLEEDRRRAALSAKEARSNRRKDDRQLKEYVHTLEVHLDQLSKEKQESETAMLEAVRAETTKALKQGSHATAAAAAAADEEVRQARAELEAAQALLEEALKEKAVAVQEKAAGDALLRTEQGKRAALEKEVERLKESTATLTQRLLDAVAKAERADEEERDAATAKAV-AERXXXXXXXXAAREEETARCREEFYSALAEEKEKLRKQMEVRLATMRAGLKRRLQEARSERRGTTGSVSGRPMSGGI 593
BLAST of mRNA_L-elsbetiae_contig1914.5648.1 vs. uniprot
Match: A0A6H5KQY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQY4_9PHAE) HSP 1 Score: 276 bits (706), Expect = 7.860e-79 Identity = 181/247 (73.28%), Postives = 204/247 (82.59%), Query Frame = 1 Query: 1330 IQALEDQLSYLEEDRRRVLLAAKEARSNRRKDDRQLKEYVHTLEVHLDQLSKEKQESETAVVETVRAETAKALEQAQQGTQAAAVKAAEEVKRARGELDAAQALLEEALRDKAAAVQEKAASDALLRTEQGKGAALEKEVERLRESTVALTQRLLDTVAEAERAGKDERDAIQARAHEATEAAVXXXXXXXREEETARCREEMEVALAEEKEELRKXMEARVATMRAGLKRRLQEARAERAGTASGI 2070 I ALE+QL+YLEEDRRR L+AKEARSNRRKDDRQLKEYVHTLEVHLDQLSKEKQES+TA++E VRAETAKAL+Q T AAA A EEV++ R EL+AAQALLEEAL++KA AVQEKAA DALLRTEQGK AALEKEV RL+EST LTQRLLD VA+AERA ++ERDA A+A A + XXX REEETARCREE ALAEEK++LRK ME R+ATMRAGLKRRLQEAR+ER GT + Sbjct: 343 ILALENQLAYLEEDRRRAALSAKEARSNRRKDDRQLKEYVHTLEVHLDQLSKEKQESKTAMLEVVRAETAKALKQGSHATAAAAEAANEEVRQVRAELEAAQALLEEALKEKAVAVQEKAAGDALLRTEQGKRAALEKEVVRLKESTATLTQRLLDAVAKAERADEEERDAATAKAV-AEREEIETAXXXAREEETARCREEFYSALAEEKKKLRKQMEVRLATMRAGLKRRLQEARSERRGTTGSV 588 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1914.5648.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1914.5648.1 >prot_L-elsbetiae_contig1914.5648.1 ID=prot_L-elsbetiae_contig1914.5648.1|Name=mRNA_L-elsbetiae_contig1914.5648.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=719bp MRGQCGIAVVAATLATGKSTTPSRDAVAAPPHHVVSTRGSPAPSALEAAIback to top mRNA from alignment at L-elsbetiae_contig1914:5584..19554- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1914.5648.1 ID=mRNA_L-elsbetiae_contig1914.5648.1|Name=mRNA_L-elsbetiae_contig1914.5648.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=13971bp|location=Sequence derived from alignment at L-elsbetiae_contig1914:5584..19554- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1914:5584..19554- >mRNA_L-elsbetiae_contig1914.5648.1 ID=mRNA_L-elsbetiae_contig1914.5648.1|Name=mRNA_L-elsbetiae_contig1914.5648.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4314bp|location=Sequence derived from alignment at L-elsbetiae_contig1914:5584..19554- (Laminarionema elsbetiae ELsaHSoW15)back to top |