mRNA_L-elsbetiae_contig190.5591.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig190.5591.1 vs. uniprot
Match: D8LR48_ECTSI (Flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR48_ECTSI) HSP 1 Score: 456 bits (1173), Expect = 5.040e-152 Identity = 238/261 (91.19%), Postives = 248/261 (95.02%), Query Frame = 1 Query: 1 MSNRTYDLVWRETMSELNEQVHIEDNTLDVAEGDEPXXXXXQATIMEAFQHFACLYIKYVQIFKRLEMCYDAMVHPQKRIDVKMVLELVIRRVLELKHELVKWNPPNVDVRFPPPAPEQAFPWDYVNLDDILVDLKLSPDTLDIAVPRYFKQDSAIEIAARDTLVKGYIKLKLNTTDGVPLDDEEDPDAAAGEMNLDKALEIIQRNERGRQGKQRALLLKELREEEKKRRIYDATDQLEMDPEIAAANIQVYHRNPSSAIR 783 MSN TYDLVWRETM+ELNEQVHIEDNTL+VAEGDEPXXXXXQATIMEAFQHFACLYIKYVQIFKRLEMCYDAMVHPQKRIDVKMVLELVIRRVLELKHELVKWNPPN D+RFPPPAPEQAFPWDYVNLDDILVDLKLSPDTLD+AVPRYFKQD A+EI ARDTLVKGYIKLKLNT DG+PLDD+EDPD+AAGEM LDKALEIIQRNERGRQGKQRALLLKELREEEKKRRIYDATDQLEMDPEIAAANIQ R ++ R Sbjct: 1 MSNATYDLVWRETMAELNEQVHIEDNTLNVAEGDEPXXXXXQATIMEAFQHFACLYIKYVQIFKRLEMCYDAMVHPQKRIDVKMVLELVIRRVLELKHELVKWNPPNADMRFPPPAPEQAFPWDYVNLDDILVDLKLSPDTLDVAVPRYFKQDVAVEITARDTLVKGYIKLKLNTADGLPLDDKEDPDSAAGEMTLDKALEIIQRNERGRQGKQRALLLKELREEEKKRRIYDATDQLEMDPEIAAANIQRLFRGSAARRR 261
BLAST of mRNA_L-elsbetiae_contig190.5591.1 vs. uniprot
Match: A0A835Z194_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z194_9STRA) HSP 1 Score: 331 bits (848), Expect = 7.120e-111 Identity = 179/264 (67.80%), Postives = 212/264 (80.30%), Query Frame = 1 Query: 1 MSNRTYDLVWRETMSELNEQVHIEDNTLDVAEGDEPXXXXXQATIMEAFQHFACLYIKYVQIFKRLEMCYDAMVHPQKRIDVKMVLELVIRRVLELKHELVKWNPPNVDVRFPPPAPEQAFPWDYVNLDDILVDLKLSPDTLDIAVPRYFKQDSAIEIAARDTLVKGYIKLKLNTTDGVPLDDEEDPDAAAGEMNLDKALEIIQRNERGRQGKQRALLLKELREEEKKRRIYDATDQLEMDPEIAAANIQVYHRNPSSAIRLPR 792 MSN TYD +WRETM+EL+EQVHIEDN+LDVA+GD XXXXX+ATI+EAFQHFACLYIKY+QI +RLE C+DAMVHPQKR+DVKMVLELV RRV+ELKH LVKWNPPN DVR PPP PE+AFPW+YVNLDDILVDLKL P+TLD+ VPRYF++D+A EI ARD LV + L +G L M +D+AL++IQRNERGRQG+QRALL+K+LREEEK+R +YD+ DQ+EMD EIAAANIQ R S+ R R Sbjct: 1 MSNSTYDAMWRETMAELDEQVHIEDNSLDVADGDPXXXXXXKATIVEAFQHFACLYIKYLQIMRRLEACHDAMVHPQKRMDVKMVLELVTRRVIELKHALVKWNPPNGDVRLPPPMPEEAFPWEYVNLDDILVDLKLPPETLDVPVPRYFREDNAEEIEARDKLV-----VLLEEGNGTTLQST---------MTVDQALDVIQRNERGRQGRQRALLVKDLREEEKRRHMYDSADQVEMDAEIAAANIQRLFRGSSARRRALR 250
BLAST of mRNA_L-elsbetiae_contig190.5591.1 vs. uniprot
Match: A0A835Z665_9STRA (AAA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z665_9STRA) HSP 1 Score: 331 bits (848), Expect = 4.790e-104 Identity = 179/264 (67.80%), Postives = 212/264 (80.30%), Query Frame = 1 Query: 1 MSNRTYDLVWRETMSELNEQVHIEDNTLDVAEGDEPXXXXXQATIMEAFQHFACLYIKYVQIFKRLEMCYDAMVHPQKRIDVKMVLELVIRRVLELKHELVKWNPPNVDVRFPPPAPEQAFPWDYVNLDDILVDLKLSPDTLDIAVPRYFKQDSAIEIAARDTLVKGYIKLKLNTTDGVPLDDEEDPDAAAGEMNLDKALEIIQRNERGRQGKQRALLLKELREEEKKRRIYDATDQLEMDPEIAAANIQVYHRNPSSAIRLPR 792 MSN TYD +WRETM+EL+EQVHIEDN+LDVA+GD XXXXX+ATI+EAFQHFACLYIKY+QI +RLE C+DAMVHPQKR+DVKMVLELV RRV+ELKH LVKWNPPN DVR PPP PE+AFPW+YVNLDDILVDLKL P+TLD+ VPRYF++D+A EI ARD LV + L +G L M +D+AL++IQRNERGRQG+QRALL+K+LREEEK+R +YD+ DQ+EMD EIAAANIQ R S+ R R Sbjct: 1 MSNSTYDAMWRETMAELDEQVHIEDNSLDVADGDPXXXXXXKATIVEAFQHFACLYIKYLQIMRRLEACHDAMVHPQKRMDVKMVLELVTRRVIELKHALVKWNPPNGDVRLPPPMPEEAFPWEYVNLDDILVDLKLPPETLDVPVPRYFREDNAEEIEARDKLV-----VLLEEGNGTTLQST---------MTVDQALDVIQRNERGRQGRQRALLVKDLREEEKRRHMYDSADQVEMDAEIAAANIQRLFRGSSARRRALR 250
BLAST of mRNA_L-elsbetiae_contig190.5591.1 vs. uniprot
Match: A0A6H5KT47_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT47_9PHAE) HSP 1 Score: 298 bits (762), Expect = 2.110e-97 Identity = 155/176 (88.07%), Postives = 163/176 (92.61%), Query Frame = 1 Query: 250 MVLELVIRRVLELKHELVKWNPPNVDVRFPPPAPEQAFPWDYVNLDDILVDLKLSPDTLDIAVPR---------YFKQDSAIEIAARDTLVKGYIKLKLNTTDGVPLDDEEDPDAAAGEMNLDKALEIIQRNERGRQGKQRALLLKELREEEKKRRIYDATDQLEMDPEIAAANIQ 750 MVLELVIRRVLELKHELVKWNPPN D+RFPPPAPEQAFPWDYVNLDDILVDLKLSPDTLD+AVPR YFKQDSA+EI ARDTLVKGYIKLKL T DG+PLDD+EDPD+AAGEM+LD+ALEIIQRNERGRQGKQRALLLKELREEEKKRRIYDATDQLEMDPEIAAANIQ Sbjct: 1 MVLELVIRRVLELKHELVKWNPPNADMRFPPPAPEQAFPWDYVNLDDILVDLKLSPDTLDVAVPRQELRGEGGRYFKQDSAVEITARDTLVKGYIKLKLKTADGLPLDDKEDPDSAAGEMSLDQALEIIQRNERGRQGKQRALLLKELREEEKKRRIYDATDQLEMDPEIAAANIQ 176
BLAST of mRNA_L-elsbetiae_contig190.5591.1 vs. uniprot
Match: A0A067D3Y6_SAPPC (AAA domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067D3Y6_SAPPC) HSP 1 Score: 306 bits (783), Expect = 1.470e-94 Identity = 162/258 (62.79%), Postives = 197/258 (76.36%), Query Frame = 1 Query: 1 MSNRTYDLVWRETMSELNEQVHIEDNTLDVAEGDEPXXXXXQATIMEAFQHFACLYIKYVQIFKRLEMCYDAMVHPQKRIDVKMVLELVIRRVLELKHELVKWNPPNVDVRFPPPAPEQAFPWDYVNLDDILVDLKLSPDTLDIAVPRYFKQDSAIEIAARDTLVKGYIKLKLNTTDGVPLDDEEDPDAAAGEMNLDKALEIIQRNERGRQGKQRALLLKELREEEKKRRIYDATDQLEMDPEIAAANIQVYHRNPSS 774 M+N T+D W+ M+ELNEQVHIED+TLD EG E +++EAFQH+ACLYIKYVQIF LE CYD MVHPQKRIDVK ++ELV+ RV+ELKH+LVKWNPPN DVR PEQ FPW+YVNLDD+LVDLKL P L++ VPRYF +DS+ E+ RD LVKGY+KLKL + + +DD + + A M+LD+AL+IIQRNERGRQG+QR LL+ ELREEEK+RRIYD T EMDPE+AAANIQ R +S Sbjct: 1 MANYTFDTKWQSAMTELNEQVHIEDHTLDAEEGQE-VQPPPDVSMLEAFQHYACLYIKYVQIFTTLEECYDQMVHPQKRIDVKKIMELVMTRVVELKHDLVKWNPPNPDVRT---TPEQNFPWEYVNLDDLLVDLKLPPSLLEVPVPRYFVEDSSAELKKRDRLVKGYMKLKLGV-EALYIDDSDASVSLADAMSLDEALQIIQRNERGRQGRQRGLLVHELREEEKQRRIYDNTQTPEMDPELAAANIQRVFRGHNS 253
BLAST of mRNA_L-elsbetiae_contig190.5591.1 vs. uniprot
Match: A0A024URR3_9STRA (AAA domain-containing protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024URR3_9STRA) HSP 1 Score: 301 bits (772), Expect = 6.400e-93 Identity = 156/258 (60.47%), Postives = 198/258 (76.74%), Query Frame = 1 Query: 1 MSNRTYDLVWRETMSELNEQVHIEDNTLDVAEGDEPXXXXXQATIMEAFQHFACLYIKYVQIFKRLEMCYDAMVHPQKRIDVKMVLELVIRRVLELKHELVKWNPPNVDVRFPPPAPEQAFPWDYVNLDDILVDLKLSPDTLDIAVPRYFKQDSAIEIAARDTLVKGYIKLKLNTTDGVPLDDEEDPDAAAGEMNLDKALEIIQRNERGRQGKQRALLLKELREEEKKRRIYDATDQLEMDPEIAAANIQVYHRNPSS 774 M+N TYD W+ M+ELNEQVHIED+TLDV +G E + +++EAFQH+ACLYIKYVQIF LE CYD MVHPQKRIDVK ++ELV+ RV+ELKH+LVKWNPPN DVR PE+ FPW+YVNLDD+LVDLKL P L++ VP+YF +DS+ ++ RD LVKGY+KLKL D +P++ E+ + A M LD+A+++IQRNERGRQGKQR L++ELREEEK+RR+YD EM+PE+AAANIQ R +S Sbjct: 1 MANYTYDTKWQSAMTELNEQVHIEDHTLDVEDGQEATPPP-EVSMLEAFQHYACLYIKYVQIFANLEECYDQMVHPQKRIDVKQIMELVMTRVVELKHDLVKWNPPNPDVRT---TPERNFPWEYVNLDDLLVDLKLPPSLLEVPVPKYFVEDSSADLKKRDRLVKGYMKLKLGV-DTLPVEVAEESVSLADTMTLDEAIQVIQRNERGRQGKQRGALVRELREEEKQRRLYDNAQTPEMEPELAAANIQRVFRGHNS 253
BLAST of mRNA_L-elsbetiae_contig190.5591.1 vs. uniprot
Match: A0A6G0XPD9_9STRA (AAA domain-containing protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0XPD9_9STRA) HSP 1 Score: 301 bits (770), Expect = 1.320e-92 Identity = 155/258 (60.08%), Postives = 199/258 (77.13%), Query Frame = 1 Query: 1 MSNRTYDLVWRETMSELNEQVHIEDNTLDVAEGDEPXXXXXQATIMEAFQHFACLYIKYVQIFKRLEMCYDAMVHPQKRIDVKMVLELVIRRVLELKHELVKWNPPNVDVRFPPPAPEQAFPWDYVNLDDILVDLKLSPDTLDIAVPRYFKQDSAIEIAARDTLVKGYIKLKLNTTDGVPLDDEEDPDAAAGEMNLDKALEIIQRNERGRQGKQRALLLKELREEEKKRRIYDATDQLEMDPEIAAANIQVYHRNPSS 774 M+N T+D W+ M+ELNEQVHIED+TLDV EG + + +++EAFQH+ACLYIKYVQIF LE CYD MVHPQKRIDVK ++ELV+ RV+ELKH+LVKWNPPN DVR PE+ FPW+YVNLDD+LVDLKL P+ L++ VP+YF +D++ E+ RD LVKGY+KLKL + VP++ E+ + M LD+A+++IQRNERGRQGKQR L++ELREEEK+RR+YD+ EMDPE+AAANIQ R +S Sbjct: 1 MANYTFDSKWQSAMTELNEQVHIEDHTLDVEEGQD-VQPPPEVSMLEAFQHYACLYIKYVQIFANLEECYDQMVHPQKRIDVKQIMELVMTRVVELKHDLVKWNPPNPDVRT---TPERNFPWEYVNLDDLLVDLKLPPNLLEVPVPKYFVEDNSTELKKRDRLVKGYMKLKLGV-ESVPVEVVEENVSITDTMTLDEAIQVIQRNERGRQGKQRGALVRELREEEKQRRLYDSAQTPEMDPELAAANIQRVFRGHNS 253
BLAST of mRNA_L-elsbetiae_contig190.5591.1 vs. uniprot
Match: A0A8K1C8E9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C8E9_PYTOL) HSP 1 Score: 296 bits (759), Expect = 6.440e-91 Identity = 163/266 (61.28%), Postives = 199/266 (74.81%), Query Frame = 1 Query: 1 MSNRTYDLVWRETMSELNEQVHIEDNTLDVAEGDEPXXXXX--QATIMEAFQHFACLYIKYVQIFKRLEMCYDAMVHPQKRIDVKMVLELVIRRVLELKHELVKWNPPNVDVRFPPPAPEQAFPWDYVNLDDILVDLKLSPDTLDIAVPRYFKQDSAIEIAARDTLVKGYIKLKLNTTDGVPLDDEEDPDAAAGEMNLDKALEIIQRNERGRQGKQRALLLKELREEEKKRRIYDATDQLEMDPEIAAANIQVYHRNPSSAIRLPR 792 M++ TYD W+E M+ELNEQVHIED+TL A+G EP QA+I+EAFQH+ACLYIKY+QI RL CYD MVHPQKRIDVK V+E+V R++ELKH LVKWNPPN DVR PE++FPW+YVNLDDILVDLKL P+TL++ VP+ F D A E+ R+ LVKGY+KLK + D + LD EDP A ++LD+A+ IIQRNERGRQG+QR LL++ELREEEK+RRIY+A EMDP+IAAANIQ R S R R Sbjct: 1 MASSTYDRRWQEAMAELNEQVHIEDHTLS-ADGQEPGTVEAPPQASIVEAFQHYACLYIKYIQILTRLSECYDQMVHPQKRIDVKQVMEVVTTRIVELKHALVKWNPPNPDVRT---NPERSFPWEYVNLDDILVDLKLPPETLEVPVPKSFLDDQAEELLRRERLVKGYMKLK-HGVDVIYLDSMEDPLALHDALSLDEAIAIIQRNERGRQGRQRGLLVQELREEEKQRRIYEAAQTPEMDPDIAAANIQRVFRGYHSRARAQR 261
BLAST of mRNA_L-elsbetiae_contig190.5591.1 vs. uniprot
Match: A0A1V9Z5F7_9STRA (IQ and AAA domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z5F7_9STRA) HSP 1 Score: 301 bits (770), Expect = 6.790e-90 Identity = 158/258 (61.24%), Postives = 197/258 (76.36%), Query Frame = 1 Query: 1 MSNRTYDLVWRETMSELNEQVHIEDNTLDVAEGDEPXXXXXQATIMEAFQHFACLYIKYVQIFKRLEMCYDAMVHPQKRIDVKMVLELVIRRVLELKHELVKWNPPNVDVRFPPPAPEQAFPWDYVNLDDILVDLKLSPDTLDIAVPRYFKQDSAIEIAARDTLVKGYIKLKLNTTDGVPLDDEEDPDAAAGEMNLDKALEIIQRNERGRQGKQRALLLKELREEEKKRRIYDATDQLEMDPEIAAANIQVYHRNPSS 774 M T+D W+ M+ELNEQVHIED+TLD EG E + +++EAFQH+ACLYIKYVQIF LE CYD MVHPQKRIDVK ++ELV+ RV+ELKH+LVKWNPPN DVR PEQ FPW+YVNLDD+LVDLKL P L++ VP+YF +D+++E+ RD LVKGY+KLKL + + ++D E + A M+LD+AL+IIQRNERGRQG+QR +L+ ELREEEK+RRIYD T EMDPE+AAANIQ R +S Sbjct: 826 MLRSTFDTKWQSAMTELNEQVHIEDHTLDAEEGQE-VQPPPEVSMLEAFQHYACLYIKYVQIFTTLEECYDQMVHPQKRIDVKRIMELVMTRVVELKHDLVKWNPPNPDVRT---TPEQNFPWEYVNLDDLLVDLKLPPSLLEVPVPKYFVEDNSVELKKRDRLVKGYMKLKLGV-EALYVEDTETSVSMADAMSLDEALQIIQRNERGRQGRQRGILVYELREEEKQRRIYDNTQTPEMDPELAAANIQRVFRGHNS 1078
BLAST of mRNA_L-elsbetiae_contig190.5591.1 vs. uniprot
Match: A0A5D6Y8C7_9STRA (WW domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y8C7_9STRA) HSP 1 Score: 290 bits (742), Expect = 4.140e-86 Identity = 153/248 (61.69%), Postives = 195/248 (78.63%), Query Frame = 1 Query: 13 TYDLVWRETMSELNEQVHIEDNTLDVAEGDE--PXXXXXQATIMEAFQHFACLYIKYVQIFKRLEMCYDAMVHPQKRIDVKMVLELVIRRVLELKHELVKWNPPNVDVRFPPPAPEQAFPWDYVNLDDILVDLKLSPDTLDIAVPRYFKQDSAIEIAARDTLVKGYIKLKLNTTDGVPLDDEEDPDAAAGEMNLDKALEIIQRNERGRQGKQRALLLKELREEEKKRRIYDATDQLEMDPEIAAANIQ 750 TYD W+E M+ELNEQVHIED+TL AEG + P QA+I+EAFQH+ACLYIKY+QI KRL CYD MVHPQKRIDVK V+E+V R++ELKH+LVKWNPPN DV+ PE++FPW+YVNLDDILVDLKL P+TL+I VP+ F + A E+ R+ LVKGY+KLK + D + LD E+ + AG M++D+A+ ++QRNERGRQGKQR +L+KELREEEK+R++Y++ EMDP+IAAANIQ Sbjct: 4 TYDRRWQEAMAELNEQVHIEDHTLS-AEGQDATPNEAPPQASIVEAFQHYACLYIKYIQILKRLADCYDQMVHPQKRIDVKQVMEVVTTRIVELKHDLVKWNPPNPDVQT---QPERSFPWEYVNLDDILVDLKLPPETLEIPVPKSFADEHAEELLRRERLVKGYMKLK-HGVDMIYLDSNEEQLSIAGAMSIDEAIAVLQRNERGRQGKQRGVLVKELREEEKQRKLYESAQAPEMDPDIAAANIQ 246 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig190.5591.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig190.5591.1 >prot_L-elsbetiae_contig190.5591.1 ID=prot_L-elsbetiae_contig190.5591.1|Name=mRNA_L-elsbetiae_contig190.5591.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=266bp MSNRTYDLVWRETMSELNEQVHIEDNTLDVAEGDEPPPPPPQATIMEAFQback to top mRNA from alignment at L-elsbetiae_contig190:19493..22165+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig190.5591.1 ID=mRNA_L-elsbetiae_contig190.5591.1|Name=mRNA_L-elsbetiae_contig190.5591.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2673bp|location=Sequence derived from alignment at L-elsbetiae_contig190:19493..22165+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig190:19493..22165+ >mRNA_L-elsbetiae_contig190.5591.1 ID=mRNA_L-elsbetiae_contig190.5591.1|Name=mRNA_L-elsbetiae_contig190.5591.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1596bp|location=Sequence derived from alignment at L-elsbetiae_contig190:19493..22165+ (Laminarionema elsbetiae ELsaHSoW15)back to top |