mRNA_L-elsbetiae_contig189.5551.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig189.5551.1
Unique NamemRNA_L-elsbetiae_contig189.5551.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig189.5551.1 vs. uniprot
Match: D7FIT5_ECTSI (YihA3, YihA/EngB-like GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIT5_ECTSI)

HSP 1 Score: 497 bits (1279), Expect = 2.160e-170
Identity = 246/274 (89.78%), Postives = 261/274 (95.26%), Query Frame = 2 
Query:  512 SLGTRKRPRQAGGFNKAYDRTGKQVHSDFAAGGFARWMGSASKGWPKFRHRLPEVALAGHTNCGKSTLVNSLAGIHPRRGPAATSDRAGWTDLVGFYQIGKKPPVLTLVDLPGYGHAVATRHAIKGWLRMIKEYITTREELIRCCVLVDCTRGFCEEDRSLLQLLAKRGIPHQIVLTKADLLTPELLSACVLLLRKDLSDLIGREASSAVPLSAVCGSSGAGVTTLWKDLAKLAAKAPGSLVATQAAHMAARKARAKEEADLEAKKAMRSSRGH 1333
            SLG+RKRPRQAGGFNKAYDRTGKQVHSDFAAGGFARWMGSASKGWP FRHRLPEVALAGHTNCGKSTLVN+L+GIHPRRGPA+TSDRAGWTDLVGFYQ+GKKPPVLT+VDLPGYGHAVATRHAIKGWLRMIKEYITTR+ELIRCCVLVDCTRGFCEEDR+LLQLLAKR IP+QIVLTKADLLTPELLSACVLLLR+DLSDL G+EA S  P SAVCG+SGAGVTTLWKDLAK AAKAPGSLVA QAAH+AARKAR KEEADL A+KA R+SR H
Sbjct:  147 SLGSRKRPRQAGGFNKAYDRTGKQVHSDFAAGGFARWMGSASKGWPTFRHRLPEVALAGHTNCGKSTLVNALSGIHPRRGPASTSDRAGWTDLVGFYQVGKKPPVLTMVDLPGYGHAVATRHAIKGWLRMIKEYITTRQELIRCCVLVDCTRGFCEEDRALLQLLAKRNIPYQIVLTKADLLTPELLSACVLLLRRDLSDLCGQEAGSTAPFSAVCGTSGAGVTTLWKDLAKQAAKAPGSLVAMQAAHLAARKAREKEEADLMARKAARTSREH 420
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BLAST of mRNA_L-elsbetiae_contig189.5551.1 vs. uniprot
Match: A0A836CEK3_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEK3_9STRA)

HSP 1 Score: 280 bits (715), Expect = 1.070e-86
Identity = 149/261 (57.09%), Postives = 184/261 (70.50%), Query Frame = 2 
Query:  509 LSLGTRKRPRQAGGFNKAYDRTGKQVHSDFAAGGFARWMGSASKGWPKFRHRLPEVALAGHTNCGKSTLVNSLAGIHPRRGPAATSDRAGWTDLVGFYQIGKKPPVLTLVDLPGYGHAVATRHAIKGWLRMIKEYIT-TREELIRCCVLVDCTRGFCEEDRSLLQLLAKRGIPHQIVLTKADLLTPELLSACVLLLRKDLSDLIGREASSAVPLSAVCGSSGAGVTTLWKDLAKLAAKAPGSLVATQAAHMAARKARAKEE 1288
            L LG RK+P     F K +    KQV +   AGGFA  +GSASK WP F+H LPEVALAGHTNCGKSTLVN+LAGIHPR+G A  S+RAGWTD V FYQIGKKPPVLTLVDLPGYGHAVA R   + W RM K+Y++  R +L RCCVLVD TRG  EEDR LL  L +RGI HQ+VLTK DLL PE L+  +  + +DL D IG +  +  P+  VCG +GAGVT LW+++   + + PGSLV++  A    R+A+ +++
Sbjct:   61 LGLGRRKQPLDNRAFTKKW-LNNKQVATGMGAGGFAVHLGSASKDWPMFKHNLPEVALAGHTNCGKSTLVNALAGIHPRQGLAGVSERAGWTDFVSFYQIGKKPPVLTLVDLPGYGHAVANRSMQREWRRMTKDYLSGQRRQLCRCCVLVDATRGLAEEDRILLAHLERRGIEHQLVLTKGDLLLPEQLAQSMAAVTQDLMD-IGAKLLAKPPILPVCGHTGAGVTALWENMRTRSLREPGSLVSSIEAARRVREAKLEKD 319
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BLAST of mRNA_L-elsbetiae_contig189.5551.1 vs. uniprot
Match: A0A7S3M560_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M560_9STRA)

HSP 1 Score: 206 bits (524), Expect = 1.280e-55
Identity = 99/201 (49.25%), Postives = 135/201 (67.16%), Query Frame = 2 
Query:  515 LGTRKRPRQAGGFNKAYDRTGKQVHSDFAAGGFARWMGSASKGWPKFRHRLPEVALAGHTNCGKSTLVNSLAGIHPRRGPAATSDRAGWTDLVGFYQIGKKPPVLTLVDLPGYGHAVATRHAIKGWLRMIKEYITTREELIRCCVLVDCTRGFCEEDRSLLQLLAKRGIPHQIVLTKADLLTPELLSACVLLLRKDLSDLI 1117
            LG+R+R  Q       ++    +  ++  AGGFA  + S S+ WP F+H LPE+A AGH+N GKSTLVN++ G+ P +GPA  S+RAGWTD + FYQ+GKKPPV+TL DLPGYGHAVA+    + W  MI++Y+  R  L RCC+LVD TRG C+ D+ L++ L K  IP  +VLTK DLL    L+ CVL ++ DL+  +
Sbjct:   97 LGSRRRKHQVYSHITVHEPGVIKKKTNSGAGGFALHLTSTSRDWPIFKHLLPEIAFAGHSNSGKSTLVNAMIGVLPSKGPAKVSERAGWTDQICFYQLGKKPPVMTLADLPGYGHAVASAGQRRAWGEMIRDYLQNRTILSRCCILVDSTRGLCKGDKMLVRFLTKYDIPWMVVLTKGDLLDCTSLAQCVLAVQLDLAPFV 297
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BLAST of mRNA_L-elsbetiae_contig189.5551.1 vs. uniprot
Match: A0A4D9CU55_9STRA (EngB-type G domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CU55_9STRA)

HSP 1 Score: 197 bits (502), Expect = 3.720e-55
Identity = 101/184 (54.89%), Postives = 126/184 (68.48%), Query Frame = 2 
Query:  590 SDFAAGGFARWMGSAS----KGWPKFRHRLPEVALAGHTNCGKSTLVNSLAGIHPRRGPAATSDRAGWTDLVGFYQIGKKPPVLTLVDLPGYGHAVATRHAIKGWLRMIKEYITTREELIRCCVLVDCTRGFCEEDRSLLQLLAKRGIPHQIVLTKADLLTPELLSACVLLLRKDLSD--LIGR 1123
            S   A GFA +M +AS    +GWP F+H LPEVA AGH+NCGKS+LVN++AG+ PRRG A  SDRAGWTD V FYQ+G+KPPVLTL DLPGYGHAVA+    + W  M + Y+ TR  L  CCVLVDC RG C ED  LL+ L  R +  ++VLTK DLL    L+    L+ +D+ +  L+GR
Sbjct:   61 SQIGATGFATFMAAASGRGSEGWPFFKHMLPEVAFAGHSNCGKSSLVNAVAGMVPRRGVARVSDRAGWTDAVFFYQLGRKPPVLTLADLPGYGHAVASVQQKRRWREMTQSYLATRRVLSVCCVLVDCVRGLCREDGDLLKALRARDVAVKVVLTKGDLLDEMDLARSHSLVVRDMREMGLLGR 244
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BLAST of mRNA_L-elsbetiae_contig189.5551.1 vs. uniprot
Match: A0A8J5X8C3_DIALT (EngB-type G domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X8C3_DIALT)

HSP 1 Score: 138 bits (347), Expect = 8.560e-33
Identity = 77/177 (43.50%), Postives = 107/177 (60.45%), Query Frame = 2 
Query:  665 LPEVALAGHTNCGKSTLVNSLAGIHPRRGPAATSDRAGWTDLVGFYQIGKKPPVLTLVDLPGYGHAVATRHAIKGWLRMIKEYITTREELIRCCVLVDCTRGFCEEDRSLLQLLAKRGIPHQIVLTKADLLTPELLSACVLLLRKDLSDLIGREASSAVPLSAVCGSSGA-GVTTLW 1192
            LPEVALAG++N GKS+L+N+L G+  +RGPA+   RAGWT+ V  ++   +   L LVD PGYG AV ++     W R +  Y+   E+L    +LVDCTRG CE D  L++   +RG+  QIVLTKADLLT  LL+    ++  DL +  G E  +  P  A+  ++   GV  LW
Sbjct:  110 LPEVALAGYSNSGKSSLLNALTGLPAQRGPASVDSRAGWTESVFAFEAVVRGVSLALVDTPGYGVAVQSQWTRARWERALHAYVQNSEQLRCVLLLVDCTRGLCEHDWRLMRTARRRGVVCQIVLTKADLLTAPLLARSHAVVTADLHERHGGEIGARAPAVAMVSANFVQGVRQLW 286
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BLAST of mRNA_L-elsbetiae_contig189.5551.1 vs. uniprot
Match: A0A8J2SNE2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SNE2_9STRA)

HSP 1 Score: 136 bits (343), Expect = 1.380e-32
Identity = 81/194 (41.75%), Postives = 107/194 (55.15%), Query Frame = 2 
Query:  647 PKFRHRLPEVALAGHTNCGKSTLVNSLAGIHP--RRGPAATSDRAGWTDLVGFYQIGKKPPVLTLVDLPGYG-HAVATRHAIKGWLRMIKEYITTREELIRCCVLVDCTRGFCEEDRSLLQLLAKRGIPHQIVLTKADLLT-PELLSACVLLLRKDLSDLIGREASSAVPLSAVCGSSGAGVTTLWKDLAKLAA 1216
            P  +H LPEV L G  N GKSTL+N+L G  P  +  PA+ SDRAGWT  + + ++G KPP+L +VD PGYG HAVAT    + W  +  +Y  TR  L    V+VD TRG   EDR  L +L+    P  + L+K DLL  P  ++ C  L+  D          +   + A CG++GAGV  LW  L  L A
Sbjct:  107 PPLKHALPEVLLVGAANAGKSTLINALVGAAPASKAAPASASDRAGWTSGLEWIRVGAKPPLLYVVDAPGYGAHAVATARERREWTTLCADYARTRATLAAAVVVVDATRGVSTEDRRWLDVLS--SAPTVVALSKCDLLKGPGAVARCARLVEDD----------TQCDVVATCGTTGAGVAELWAKLRALCA 288
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BLAST of mRNA_L-elsbetiae_contig189.5551.1 vs. uniprot
Match: R1EQK4_EMIHU (GTP-binding protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EQK4_EMIHU)

HSP 1 Score: 132 bits (332), Expect = 2.350e-30
Identity = 77/199 (38.69%), Postives = 108/199 (54.27%), Query Frame = 2 
Query:  656 RHRLPEVALAGHTNCGKSTLVNSLAGIHPRRGPAATSDRAGWTDLVGFYQIGKKPPV----------LTLVDLPGYGHAVATRHAIKGWLRMIKEYITTREELIRCCVLVDCTRGFCEEDRSLLQLLAKRGIPHQIVLTKADLLTPELLSACVLLLRKDLSDLIGR-------EASSAVPLSAVCGSSGAGVTTLWKDL 1201
            R+  PEVAL GH+NCGKS L+N+L G   RRGPA    RAGWT  + FY    +  +          L LVD PGYGHAVA    ++ W  +I+ Y+++   L    +LVDC+RG C  D  +L+LL KR +P   VLTK DLL P  L+    ++   + + +         +A+ AVPL  +     +G+  LW+ L
Sbjct:  125 RNGRPEVALLGHSNCGKSALLNALIGAKARRGPAEVDSRAGWTMRLHFYWARPRGLLDEAHAGSQQGLVLVDTPGYGHAVAGAKELRHWRDLIEAYVSSSPSLRLALLLVDCSRGLCAADGRVLRLLRKRRVPTFAVLTKCDLLPPAELARSHAIVSAQVDEALRNGAAPSRADAAPAVPLLMLSSHFYSGIDGLWERL 323
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BLAST of mRNA_L-elsbetiae_contig189.5551.1 vs. uniprot
Match: A0A8J6CDF0_DIALT (EngB-type G domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CDF0_DIALT)

HSP 1 Score: 130 bits (327), Expect = 3.960e-30
Identity = 82/202 (40.59%), Postives = 114/202 (56.44%), Query Frame = 2 
Query:  614 ARWMGSASKG-WPKFRHRLPEVALAGHTNCGKSTLVNSLAGIHPRRGPAATSDRAGWTDLVGFYQI-----GKKPPVLTLVDLPGYGHAVATRHAIKGWLRMIKEYITTREELIRCCVLVDCTRGFCEEDRSLLQLLAKRGIPHQIVLTKADLLTPELLSACVLLLRKDLSDLIGREASSAVPLSAVCGSSGAGVTTLWKDL 1201
            A ++G A  G WP     LPEVAL G +N GKS+L+N+  G     G A  S RAGWT  + F+++     G+  P   LVD+PGYG AVA     + W R I+ Y++ R  L+   +LVD  RG   EDR LL  L + G PH +VLT+ DLL+P  L+ C   +  +L +L    A++ VP+ +V   +G GV  LW+ L
Sbjct:  118 AEYIGCALLGDWPD-GGGLPEVALVGQSNSGKSSLLNAFLGSISGEGLAPVSARAGWTAHLSFFRLSAELAGEFAPRFVLVDMPGYGDAVADTSTRRTWRRAIRAYLSHRPALLSVLLLVDAERGLETEDRELLARLVRAGTPHALVLTRCDLLSPLQLARCHYRVSDELGEL-NSAAAADVPMISVL--TGVGVRELWERL 315
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BLAST of mRNA_L-elsbetiae_contig189.5551.1 vs. uniprot
Match: A0A6I7PHI3_9PROT (Probable GTP-binding protein EngB n=1 Tax=Geminicoccaceae bacterium TaxID=2448052 RepID=A0A6I7PHI3_9PROT)

HSP 1 Score: 120 bits (301), Expect = 1.260e-27
Identity = 76/187 (40.64%), Postives = 104/187 (55.61%), Query Frame = 2 
Query:  665 LPEVALAGHTNCGKSTLVNSLAGIHPRRGPAATSDRAGWTDLVGFYQIGKKPPVLTLVDLPGYGHAVATRHAIKGWLRMIKEYITTREELIRCCVLVDCTRGFCEEDRSLLQLLAKRGIPHQIVLTKADLLTPELLSACVLLLRKDLSDLIGREASSAVPLSAVCGSS-GAGVTTLWKDLAKLAAKA 1222
            LPEVA AG +N GKS+L+N+L G   R+  A TS+  G T  V F+ +  +   L LVDLPGYG A A +  +  W+ +IK Y+  R  L   CVLVD   G  E DR ++QLL K  +P  +V TKADL+ P  L+  +     +L     R  ++A+P  A   S+ GAG+  L   LA L  +A
Sbjct:   43 LPEVAFAGRSNVGKSSLINALTG---RKTLARTSNTPGRTQEVNFFDLAGE---LILVDLPGYGFAKAPKAKVDAWVELIKAYLAGRPTLRLACVLVDARHGLKESDREVMQLLGKAAVPFLVVFTKADLIKPPALAKLLATSEAEL-----RRTAAALPTPAATSSAKGAGIDHLRARLAMLTERA 218
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BLAST of mRNA_L-elsbetiae_contig189.5551.1 vs. uniprot
Match: A0A2W6VFB7_SPHSX (Probable GTP-binding protein EngB n=1 Tax=Sphingomonas sp. TaxID=28214 RepID=A0A2W6VFB7_SPHSX)

HSP 1 Score: 118 bits (295), Expect = 6.650e-27
Identity = 63/138 (45.65%), Postives = 89/138 (64.49%), Query Frame = 2 
Query:  665 LPEVALAGHTNCGKSTLVNSLAGIHPRRGPAATSDRAGWTDLVGFYQIGKKPPVLTLVDLPGYGHAVATRHAIKGWLRMIKEYITTREELIRCCVLVDCTRGFCEEDRSLLQLLAKRGIPHQIVLTKADLLTPELLSA 1078
            LPEVA AG +N GKS+L+N+L G   R+G A TS+  G T  +  + +G+ PPVL LVD+PGYG+A A +  I+ W R++ +Y+  R  L R  VLVD   G    D+ +++LL K  + +QIVLTKAD + P  L+A
Sbjct:   38 LPEVAFAGRSNVGKSSLLNALTG---RQGLARTSNTPGRTQELNLFLVGE-PPVLRLVDMPGYGYAEAPKDLIREWGRLVNDYLRGRPTLKRVLVLVDSRHGLKPVDKEIMELLDKAAVSYQIVLTKADKIKPTALAA 171
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig189.5551.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIT5_ECTSI2.160e-17089.78YihA3, YihA/EngB-like GTPase n=1 Tax=Ectocarpus si... [more]
A0A836CEK3_9STRA1.070e-8657.09P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S3M560_9STRA1.280e-5549.25Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A4D9CU55_9STRA3.720e-5554.89EngB-type G domain-containing protein n=2 Tax=Mono... [more]
A0A8J5X8C3_DIALT8.560e-3343.50EngB-type G domain-containing protein n=1 Tax=Diac... [more]
A0A8J2SNE2_9STRA1.380e-3241.75Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
R1EQK4_EMIHU2.350e-3038.69GTP-binding protein n=2 Tax=Emiliania huxleyi TaxI... [more]
A0A8J6CDF0_DIALT3.960e-3040.59EngB-type G domain-containing protein n=1 Tax=Diac... [more]
A0A6I7PHI3_9PROT1.260e-2740.64Probable GTP-binding protein EngB n=1 Tax=Geminico... [more]
A0A2W6VFB7_SPHSX6.650e-2745.65Probable GTP-binding protein EngB n=1 Tax=Sphingom... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig189contigL-elsbetiae_contig189:17445..23004 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score419.5
Seed ortholog evalue1.1e-114
Seed eggNOG ortholog2880.D7FIT5
Hectar predicted targeting categoryother localisation
EggNOG free text desc.GTP binding
EggNOG OGsCOG0218@1,KOG2486@2759
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionYihA3, YihA/EngB-like GTPase
Ec32 orthologEc-20_002980.1
Exons7
Model size1594
Cds size714
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815786.0055637-UTR-L-elsbetiae_contig189:17444..180521622815786.0055637-UTR-L-elsbetiae_contig189:17444..18052Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig189 17445..18052 +
1691683101.470118-UTR-L-elsbetiae_contig189:17444..180521691683101.470118-UTR-L-elsbetiae_contig189:17444..18052Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig189 17445..18052 +
1622815786.016622-UTR-L-elsbetiae_contig189:18873..188871622815786.016622-UTR-L-elsbetiae_contig189:18873..18887Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig189 18874..18887 +
1691683101.4799616-UTR-L-elsbetiae_contig189:18873..188871691683101.4799616-UTR-L-elsbetiae_contig189:18873..18887Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig189 18874..18887 +
1622815786.0944903-UTR-L-elsbetiae_contig189:22746..230041622815786.0944903-UTR-L-elsbetiae_contig189:22746..23004Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig189 22747..23004 +
1691683101.5564032-UTR-L-elsbetiae_contig189:22746..230041691683101.5564032-UTR-L-elsbetiae_contig189:22746..23004Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig189 22747..23004 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815786.030747-CDS-L-elsbetiae_contig189:18887..189511622815786.030747-CDS-L-elsbetiae_contig189:18887..18951Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig189 18888..18951 +
1691683101.488241-CDS-L-elsbetiae_contig189:18887..189511691683101.488241-CDS-L-elsbetiae_contig189:18887..18951Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig189 18888..18951 +
1622815786.040986-CDS-L-elsbetiae_contig189:19745..198941622815786.040986-CDS-L-elsbetiae_contig189:19745..19894Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig189 19746..19894 +
1691683101.5015392-CDS-L-elsbetiae_contig189:19745..198941691683101.5015392-CDS-L-elsbetiae_contig189:19745..19894Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig189 19746..19894 +
1622815786.0518153-CDS-L-elsbetiae_contig189:20539..206431622815786.0518153-CDS-L-elsbetiae_contig189:20539..20643Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig189 20540..20643 +
1691683101.5099952-CDS-L-elsbetiae_contig189:20539..206431691683101.5099952-CDS-L-elsbetiae_contig189:20539..20643Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig189 20540..20643 +
1622815786.0629547-CDS-L-elsbetiae_contig189:21353..214441622815786.0629547-CDS-L-elsbetiae_contig189:21353..21444Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig189 21354..21444 +
1691683101.5186338-CDS-L-elsbetiae_contig189:21353..214441691683101.5186338-CDS-L-elsbetiae_contig189:21353..21444Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig189 21354..21444 +
1622815786.0727954-CDS-L-elsbetiae_contig189:22087..222661622815786.0727954-CDS-L-elsbetiae_contig189:22087..22266Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig189 22088..22266 +
1691683101.5269096-CDS-L-elsbetiae_contig189:22087..222661691683101.5269096-CDS-L-elsbetiae_contig189:22087..22266Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig189 22088..22266 +
1622815786.0849159-CDS-L-elsbetiae_contig189:22619..227461622815786.0849159-CDS-L-elsbetiae_contig189:22619..22746Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig189 22620..22746 +
1691683101.5350945-CDS-L-elsbetiae_contig189:22619..227461691683101.5350945-CDS-L-elsbetiae_contig189:22619..22746Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig189 22620..22746 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig189.5551.1prot_L-elsbetiae_contig189.5551.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig189 18888..22746 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig189.5551.1

>prot_L-elsbetiae_contig189.5551.1 ID=prot_L-elsbetiae_contig189.5551.1|Name=mRNA_L-elsbetiae_contig189.5551.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=238bp
MGSASKGWPKFRHRLPEVALAGHTNCGKSTLVNSLAGIHPRRGPAATSDR
AGWTDLVGFYQIGKKPPVLTLVDLPGYGHAVATRHAIKGWLRMIKEYITT
REELIRCCVLVDCTRGFCEEDRSLLQLLAKRGIPHQIVLTKADLLTPELL
SACVLLLRKDLSDLIGREASSAVPLSAVCGSSGAGVTTLWKDLAKLAAKA
PGSLVATQAAHMAARKARAKEEADLEAKKAMRSSRGH*
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mRNA from alignment at L-elsbetiae_contig189:17445..23004+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig189.5551.1 ID=mRNA_L-elsbetiae_contig189.5551.1|Name=mRNA_L-elsbetiae_contig189.5551.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5560bp|location=Sequence derived from alignment at L-elsbetiae_contig189:17445..23004+ (Laminarionema elsbetiae ELsaHSoW15)
GCTTGTCAATGTTACTCTTTCATGTCTACAGGTTGCCACTCTGCAAAGGG
GTTGATATATTTGTGATGCTATTGTACGTTCTAGAGTGCTTGTTCCTTCC
AGTCCAAGCCAAATCGGGTGTCTCGTCGGCGTCATCGGAGAATGAAAGCA
CCTGAAAACATGTTAGGGCAACGTCGGCATTGTTTTCCGGCTTCCGCAGA
AAGAGAGAGACAGGGAGAGTTGTTTCCCATCGATCGTGTAGGCGACACAA
CGTTTAAATATCAAAATATGCGGAATAGGAACAACCCCTTTCATGGAGGA
ACAAAACCGACGGCTGGCCCCTTCCAATATTGCTGTGCTGTTGCCGCAGA
ACCCGTGCTGGTAACAATTGAGTGGAGCGCGCTCTTCTGTGCAGCAACAT
TATCTGCAACTGCTACTGTGGTTCTGCGTGCTCTTCTGTACAACAGCATT
CTCTGCAACTGCTACATATCTCTCTCTGCCTGTCGGCTTGTCTTCGAACC
CCCAGTCGCTGTCCTTGGGGACGCGCAAGAGGCCTCGTCAGGCTGGTGGG
TTCAACAAGGCGTACGACCGCACGGGGAAGCAGGTCCACTCGGACTTCGC
CGCTGGAGGTGCGAGTGGAACAATGTTGGTTGGCGTACATATCATGCGTC
AAGTTTCGGCCTGTCCAAAAGGCCTCTTGGAAACCCAAAAAATGGTACTA
CTGTATAGGTACCGGTTTTCGGAAGGGCTTGCCTTGAAACATGCCAAGGT
GGTTAAAAGTGCGGGCTTGACTTGACAAACCGCCTGTCAATTCTCGAAAT
TCTGTCAACCGACATCTTTGTGCGAGTACTATAGCCCGAGCATCCTGCCT
TCTGCACTTGTCTCGGGCCGGGGGGGTTACGTGGCTGGGTTGGTCCTGGT
GGGCTGTCGTTGTTGTCGTTGTTGTTGCTGTTGTTGTTGTTGCTGTTGTT
GCTGTTGTTGTGAGGGAATGACGGAAAGGAAGGGAGGCTCTTGATCTCGA
TGTCTTGACGTGTTTCGGGGTGATCGCAACAAAAAAGCTCAGCCCCCAAC
CAACGTGTAGGCCACCTTGCCACAATGTCTTACGTCTTGCTCTGCTTTTG
CGCAGATTTTCTTGCGCAGCGGGGACTGGTTTTGCGATGATAAGTGCCTG
ATCGCACCACACACCGCTCGACTCGAGGCAGAGAGCACGAAAGCGGCCTT
TTTGTGTTGATCACCCGTCACCCCGGTCGTCGTTTTGTTGCGGCCTTGTT
TTGCGTCTGTATGTAGTCGCCGCTGAAAATATCGACGATGCCTGCGTTTG
GCAGAGATATGTACTCCGCATCTATATATTTGCGTCGTACACTCAACATG
CCTCCTGGTGAGCCGCGCGCCGCTTTTGCCCCTTCCGCATCTTGGTGGTC
GTGGTCGTGGTCGTGTCTTGTCTCCACAGGGTTCGCGCGCTGGATGGGCT
CCGCGTCAAAAGGGTGGCCCAAGTTCAGGCACCGGCTTCCTGAGGTGGCC
TTGGCTGGTGAGGCAGCGAGGAGTGTGTTGTGTGCTGATTTGGGCCATAT
TTAGCGGCGGAGTGATTTACCCGCAATATTTTCCTCGTGAGCGTTTCTAT
TTAGGCTTACTTTCACACCAAGTACAGTCGACACGGGTGCCCCCCCCCCC
CCTCTTGTAGCCGAAGGAAGCACGTGTTCCATTGTCGTGTCCGGCAAGGA
CGGAGATTTGGGGGGGGGGGGGGGGGTAGGTACGCCTTTGGAGAGGAGGC
GGCGTCGCATCGTGTAGAAAGCTCCGGTTGTGTGGGACCTAAAGTCAGGC
TTATGTAGTCGCAGGTGCCGAGGGAAGATGACACCCCAACCCTCCCGGCG
GCTCTTTTGATTCTGAGTTCGTTCGTGTAGAGACACTTATCCGAAGTATG
TGTATAGTACGAAAAAATAAACGTCTCTTGGCGTATTGCTAAATCAGACC
ACGCCTTTTTCGACCTGCGGCCTGGTAGATGTTTGGGTGAGACTCAACTC
ATTTGCAGGAAAGGTTCAGCTCCGCCGCCGCTCTTTGCCGTCCAGCTCAC
GCCATAAAGCGGCGGGTTTCGACCGTGGGCAATTCCACACCAAAATGCTC
GTCTCTTCGTGTAGACGCAATCCATCTCGGTGCCATGGACCCGCCCGCCT
TGTCAAACCTAGCACGCGTCTACGGCGTGTCGACAAGCAGCACACACCAA
GGCAGCAGCAGCCTAGAATTATGTCTCTTTATCTCGGGGAGTTGACCACT
TGTACATACGTATGTACATACAACCACGCAAACCGTGCACTCACCATGCA
GGCCACACGAACTGCGGCAAGTCGACCCTGGTTAACTCCTTGGCCGGGAT
CCACCCGCGTAGAGGCCCAGCCGCCACGTCGGATCGCGCGGGTTGGACCG
ATCTCGTGGGGTTCTACCAAATCGGCAAGAAACCCCCGGTGCTGACCTTG
GTGCGTGAACGTCCATGCATTTTGTTTTTGTTATTTCCGGTCGTTTTTGC
CGGAGGAAGAGGAACAGCAATCCTGGGGATATTGTATATATCTCACGCGT
GGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTTTGTTTGTTTGTTCGTGTA
TTTTATCTGGGTGAAAGACGTGATGTTTACGAGTGTCTCCTTGCCGGCGA
GCGGAGTTTTTGGGTTCCCCGCCCTGCAACTTGTGATGTACATATGTATC
TTGGTCGCCATTTTGCCGTATTTAGCCCTCTACTAGAGGCTAGACCGCAT
GCGACATGCGAGCACCACTGCAAAAGTTTGCTGAATGGGGACAACATGTA
CTCCAAGCCGCAAGGCAAATCTCGGGCTGCGCCGCTGAGTTGCCGTTTCC
AGCGAAAATGCGTTCAAAATGGGAATATAGATTGTTTCGGATTTTCGTGT
GTTTCGGATTTCCTGTTTCGTGCCCCCCAGCCACTCTGCCATGTTTTACT
ACCGAACAGTGGTAGAACCCGAATGGTAATTTCCCTCATTCGCCCCCCGA
ATTGTCTTGTCGCATTCTTGCGCTCATTTTTCATATTTATGTTCTTAAAA
CAACAGATTTTATGTTTGTTTTGTTGTTTTTTTGTGTTTGAGAAGGTCGA
TCTCCCCGGATACGGCCACGCGGTTGCGACTCGGCACGCGATCAAAGGGT
GGCTGAGGATGATCAAGGAGTACATTACCACCCGGGAAGAGCTAATCAGG
TTTGTGCGCCGTAGCTTAACGCCTCTCCGTGTCGATTGCTGATGACAGCA
CCTGGTGTTGCTGCTGAGGGTCTGTTTCGTTTGCTGGCAGCGAGGGTACT
CTTGTGCGTGTTGATCTTGGCGGCGGGCGCTTCTCGCCTTTGCCATGCGC
CGGAGTTTTGGAGCTTCGTAAGTCGCTCTTAAGTCCTCCGTAGGTGCGTG
GCTCAGAAATGGTTTGTTTTCGTCGGCTGCTGTTCCACTGAGAGGCGAGT
TTCGATACCTTTCTTTCTCGCTGGCGTGGTCGGGTCGGCAGTGTGTATCT
TTTCCTCGCCCGTTGAGACTTTTCGGCGAAATGATGGCACGGCATTGTTT
TAGAGTTCCGCCCCAATCGATGCAAGTATTCAGTGTGCCTGTGTCGTGTG
TCGTTGCTAGTTGTTGCTGTTGATGCCTTGGACGGTTAGTCGTCACACAA
CGGCATTGGCGAAACGGCCACACGGCACCCAGGCCATCATGGAAGGATGT
TTGTAAGCTGTGTGCTCTTCCTTGGAATGTTTCAGCACCGGGGATTCATA
CATGGCGAGGGTAGATAAATACATGACACAGATTTTTCAACTTTTTTGGA
TCGCGTACCTAGAACTTCGGATTGATTTATTCCGGTGACGGAGCAATCCC
GCAACTGTCCCGCTGTCTTGACGAAGAAATCTCTCGCGGTGTTTTTCTTT
ATTTTGCAGATGCTGTGTTCTTGTGGACTGTACCCGGGGCTTCTGCGAGG
AGGATCGGTCCTTGCTGCAGTTACTCGCCAAACGTGGCATCCCGCATCAG
GCATGCAGCTGTTTTTTTTTTTTTTTTTTCTCTTTATTTTTTTTTTCTTT
TTTTTCGCCCTGGGCCCCCTTTCTCCCTTCCTCTTCGTTNNNNNNNNCAT
TATTGTCATATTCGTCGTCTGCCCCACTGGCCCCCATACTCCACTACGAC
TAGCTAGACGACCCAACCGGGGTCACACAGGACGGGGGGGGGTGGAGCCC
CTCCTGCGGTGCCGGCCTGTTGTGTTTTTATCGCGGGCAGGGTTCAGCAC
TCCCCACCCTCGTCAACAATGAAGTCGAAGTATTATTTACTACCGAAATC
GCTTTCAATTTATGTAACAGCCCAGCGTTGCATTATGTTAAATGTCCCGA
CGGTGCAATCACACTTGTAAAATTATTGACGAACACGAATGATGGTCTTG
CTCCTTGTGCCTCGCTCCTCTCTCTCTCTAAATGTGTACATGTAGAGCTT
GTTTCACCAAAAACCGTCCGCTCCCCTGGCGCCCACTCTTCTCCCTGCCC
CCTATTGTACGTTCGTCACGCTCTTGCCGGTCGCGTCCTTGGGAAGGAGC
CATTTTCGCACAAGTTTGGACCCCTGGGTTTCTTTCTCCGTGCACTTGCG
CGTGTGTAACCACCGATCACTGTCACTGCCGTCGCCCCCTCAGATCGTGC
TAACGAAGGCAGACCTCCTCACGCCGGAGCTGTTGTCGGCATGTGTGCTG
CTCCTGCGCAAGGACCTGTCAGATTTGATTGGTCGAGAGGCTAGCTCTGC
CGTCCCGTTGTCGGCCGTCTGCGGCAGCTCCGGCGCAGGCGTCACGACGC
TCTGGAAGGACTTGGCCAAACTGTAAGCAAGAGAGAGAGAGAGAAAGAGG
CGCCGGCACTAGAATGGCCTAGAATGGCGCATGTCTTGTCACTTTTCACT
CTTTGCTTAAACCAAGATATAAATGATATTCTGCACAGTCCGTCGGGACA
AGCAACAAGCAAGTGAAAGAATTGTGCCTCAATGTGTACGGGCAGGCACA
CAATGGCCACAGCCTTTGCCTGCTGGACGAACAAGCCAGCATGTTGCCAA
ACACGACAACCACATAATTCAGCATTGCCGCACACCGCCAACACTACTTC
CAGCACCACCAACCTCCACCCGCTCATGCTTCTATCCCCTGCTTGGTTCC
GATGGCGCACACGGTTTGTGAGCAGGGCTGCCAAGGCGCCGGGATCGCTG
GTGGCGACGCAGGCCGCCCACATGGCGGCCAGGAAGGCCAGGGCGAAGGA
GGAGGCGGACTTGGAGGCCAAGAAGGCAATGCGCAGTAGCAGAGGGCACT
GACAATCGTGGTTGTCGTGGAGATAGGTTCGACGATGGTTGAAATGTGTT
CGCTTGAATCGTCAACTGGTTTGAACCCTTCTTGCTCTCTTGCGCAATAA
GTGCTTGAAAAGCGAAATGCAAATAGAAGTAGTAGGAGTGTTGTGCATCT
ATCCTGGGCCTCTTTTGGCGTTCGGTGAGGTTTTGGAATGCAGTGTATGT
TCGGTGCAAGGGGGGGTGAGGACGACGATACATATGAATGACGAGGATTA
CATACACGCA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig189:17445..23004+

>mRNA_L-elsbetiae_contig189.5551.1 ID=mRNA_L-elsbetiae_contig189.5551.1|Name=mRNA_L-elsbetiae_contig189.5551.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1428bp|location=Sequence derived from alignment at L-elsbetiae_contig189:17445..23004+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGGCTCCGCGTCAAAAGGGTGGCCCAAGTTCAGGCACCGGCTTCCTGA
GGTGGCCTTGGCTGATGGGCTCCGCGTCAAAAGGGTGGCCCAAGTTCAGG
CACCGGCTTCCTGAGGTGGCCTTGGCTGGCCACACGAACTGCGGCAAGTC
GACCCTGGTTAACTCCTTGGCCGGGATCCACCCGCGTAGAGGCCCAGCCG
CCACGTCGGATCGCGCGGGTTGGACCGATCTCGTGGGGTTCTACCAAATC
GGCAAGAAACCCCCGGTGCTGACCTTGGCCACACGAACTGCGGCAAGTCG
ACCCTGGTTAACTCCTTGGCCGGGATCCACCCGCGTAGAGGCCCAGCCGC
CACGTCGGATCGCGCGGGTTGGACCGATCTCGTGGGGTTCTACCAAATCG
GCAAGAAACCCCCGGTGCTGACCTTGGTCGATCTCCCCGGATACGGCCAC
GCGGTTGCGACTCGGCACGCGATCAAAGGGTGGCTGAGGATGATCAAGGA
GTACATTACCACCCGGGAAGAGCTAATCAGGTCGATCTCCCCGGATACGG
CCACGCGGTTGCGACTCGGCACGCGATCAAAGGGTGGCTGAGGATGATCA
AGGAGTACATTACCACCCGGGAAGAGCTAATCAGATGCTGTGTTCTTGTG
GACTGTACCCGGGGCTTCTGCGAGGAGGATCGGTCCTTGCTGCAGTTACT
CGCCAAACGTGGCATCCCGCATCAGATGCTGTGTTCTTGTGGACTGTACC
CGGGGCTTCTGCGAGGAGGATCGGTCCTTGCTGCAGTTACTCGCCAAACG
TGGCATCCCGCATCAGATCGTGCTAACGAAGGCAGACCTCCTCACGCCGG
AGCTGTTGTCGGCATGTGTGCTGCTCCTGCGCAAGGACCTGTCAGATTTG
ATTGGTCGAGAGGCTAGCTCTGCCGTCCCGTTGTCGGCCGTCTGCGGCAG
CTCCGGCGCAGGCGTCACGACGCTCTGGAAGGACTTGGCCAAACTATCGT
GCTAACGAAGGCAGACCTCCTCACGCCGGAGCTGTTGTCGGCATGTGTGC
TGCTCCTGCGCAAGGACCTGTCAGATTTGATTGGTCGAGAGGCTAGCTCT
GCCGTCCCGTTGTCGGCCGTCTGCGGCAGCTCCGGCGCAGGCGTCACGAC
GCTCTGGAAGGACTTGGCCAAACTGGCTGCCAAGGCGCCGGGATCGCTGG
TGGCGACGCAGGCCGCCCACATGGCGGCCAGGAAGGCCAGGGCGAAGGAG
GAGGCGGACTTGGAGGCCAAGAAGGCAATGCGCAGTAGCAGAGGGCACTG
AGGCTGCCAAGGCGCCGGGATCGCTGGTGGCGACGCAGGCCGCCCACATG
GCGGCCAGGAAGGCCAGGGCGAAGGAGGAGGCGGACTTGGAGGCCAAGAA
GGCAATGCGCAGTAGCAGAGGGCACTGA
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