mRNA_L-elsbetiae_contig1883.5522.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1883.5522.1 vs. uniprot
Match: B2KWI7_ECTSI (EsV-1-213-like protein 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=B2KWI7_ECTSI) HSP 1 Score: 274 bits (700), Expect = 2.360e-83 Identity = 138/149 (92.62%), Postives = 143/149 (95.97%), Query Frame = -3 Query: 3 MASSRANKRVKVSSSAKESVTTLDNMAFDEKDVAESKTHTKMTFRCPVTIDNVFSAPTPTQVKVFYESRSSKGTPFDHLPKGEELAWTESFHDNKTLMGYIVYAQLFPKLLQNRIKLNAATYHWSHLDNSSEKGRTKLEQRRNAVDRLK 449 MASSRANKR KVSSSAKE VTTLDN AFDEKDVAESKTHTKMTFRCPVTIDNVF+APT TQVKVFYESRSSKG PFDHLP+GE+LAWTESFHDNKTLMG+IVY QLFPKLLQNRIKLNAATYHW+HLDNSSEKGRTKLEQRRNAVDRLK Sbjct: 1 MASSRANKRAKVSSSAKEPVTTLDNKAFDEKDVAESKTHTKMTFRCPVTIDNVFTAPTATQVKVFYESRSSKGEPFDHLPEGEKLAWTESFHDNKTLMGFIVYTQLFPKLLQNRIKLNAATYHWAHLDNSSEKGRTKLEQRRNAVDRLK 149
BLAST of mRNA_L-elsbetiae_contig1883.5522.1 vs. uniprot
Match: A0A6H5L2T2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2T2_9PHAE) HSP 1 Score: 275 bits (702), Expect = 7.480e-83 Identity = 138/149 (92.62%), Postives = 145/149 (97.32%), Query Frame = -3 Query: 3 MASSRANKRVKVSSSAKESVTTLDNMAFDEKDVAESKTHTKMTFRCPVTIDNVFSAPTPTQVKVFYESRSSKGTPFDHLPKGEELAWTESFHDNKTLMGYIVYAQLFPKLLQNRIKLNAATYHWSHLDNSSEKGRTKLEQRRNAVDRLK 449 MASSRANKRVKVSSSAKESVTTLDN AFDEK++AESKTHTKMTFRCPVTIDNVF+APT TQVKVFYESRSSKG PFDHLP+GE+LAWTESFHDNKTLMG+IVY QLFPKLLQNRIKLNAATYHW+HLDNSSEKGRTKLEQRRNAVDRLK Sbjct: 1 MASSRANKRVKVSSSAKESVTTLDNKAFDEKELAESKTHTKMTFRCPVTIDNVFTAPTSTQVKVFYESRSSKGEPFDHLPEGEKLAWTESFHDNKTLMGFIVYTQLFPKLLQNRIKLNAATYHWAHLDNSSEKGRTKLEQRRNAVDRLK 149
BLAST of mRNA_L-elsbetiae_contig1883.5522.1 vs. uniprot
Match: A0A6H5K0T8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0T8_9PHAE) HSP 1 Score: 267 bits (683), Expect = 4.510e-80 Identity = 135/149 (90.60%), Postives = 140/149 (93.96%), Query Frame = -3 Query: 3 MASSRANKRVKVSSSAKESVTTLDNMAFDEKDVAESKTHTKMTFRCPVTIDNVFSAPTPTQVKVFYESRSSKGTPFDHLPKGEELAWTESFHDNKTLMGYIVYAQLFPKLLQNRIKLNAATYHWSHLDNSSEKGRTKLEQRRNAVDRLK 449 MASSRANKR KVSSSAKE VTTLD AFDEKDVAESKTHTKMTFRCPVTIDNVF+APT TQV VFYES SSKG PFDHLP+GE+LAWTESFHDNKTLMG+IVY QLFPKLLQNRIKLNAATYHW+HLDNSSEKGRTKLEQRRNAVDRLK Sbjct: 1 MASSRANKRAKVSSSAKEPVTTLDTKAFDEKDVAESKTHTKMTFRCPVTIDNVFTAPTATQVNVFYESSSSKGEPFDHLPEGEKLAWTESFHDNKTLMGFIVYTQLFPKLLQNRIKLNAATYHWAHLDNSSEKGRTKLEQRRNAVDRLK 149
BLAST of mRNA_L-elsbetiae_contig1883.5522.1 vs. uniprot
Match: B2KWI6_ECTSI (EsV-1-213-like protein 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=B2KWI6_ECTSI) HSP 1 Score: 210 bits (534), Expect = 1.940e-58 Identity = 110/149 (73.83%), Postives = 124/149 (83.22%), Query Frame = -3 Query: 3 ASSRANKRVKVSSSAKESVTTLDNMAFDEKDVAESKTHTKMTFRCPVTIDNVFSAPTPTQVKVFYESRS-SKGTPFDHLPKGEELAWTESFHDNKTLMGYIVYAQLFPKLLQNRIKLNAATYHWSHLDNSSEKGRTKLEQRRNAVDRLK 446 +SSR KR K+S +TTLDN+ F+ DVAE KTHTKMTFRCPVTID+VFSAPTP QV++FYESR+ S G PF LP+ E LAWTESFHDNKTLMG+IVY+QLFPKLLQ RIKLNAATYHW HLD +SEKGRTKLEQRR+A DRLK Sbjct: 3 SSSRDTKRAKLSP-----ITTLDNIDFNVNDVAEPKTHTKMTFRCPVTIDSVFSAPTPAQVQMFYESRTGSSGKPFGDLPEDEILAWTESFHDNKTLMGFIVYSQLFPKLLQTRIKLNAATYHWGHLDPASEKGRTKLEQRRSADDRLK 146
BLAST of mRNA_L-elsbetiae_contig1883.5522.1 vs. uniprot
Match: A0A6H5K1E4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1E4_9PHAE) HSP 1 Score: 192 bits (489), Expect = 1.030e-52 Identity = 96/105 (91.43%), Postives = 98/105 (93.33%), Query Frame = -3 Query: 3 RCPVTIDNVFSAPTPTQVKVFYESRSSKGTPFDHLPKGEELAWTESFHDNKTLMGYIVYAQLFPKLLQNRIKLNAATYHWSHLDNSSEKGRTKLEQRRNAVDRLK 317 RCPVTIDNVFSAPTPTQVKVFYES SSKG PFDHLPKGEELAWTESFHD KTLMG+IVYAQL PKLLQNRIKLNAATYHW+HLDNS EKG TKLEQRR AVDRLK Sbjct: 9 RCPVTIDNVFSAPTPTQVKVFYESSSSKGKPFDHLPKGEELAWTESFHD-KTLMGFIVYAQLLPKLLQNRIKLNAATYHWAHLDNSKEKGSTKLEQRRRAVDRLK 112
BLAST of mRNA_L-elsbetiae_contig1883.5522.1 vs. uniprot
Match: A0A6H5J9C0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C0_9PHAE) HSP 1 Score: 183 bits (464), Expect = 1.480e-48 Identity = 95/143 (66.43%), Postives = 111/143 (77.62%), Query Frame = -3 Query: 3 NKRVKVSSSAKESVTTLDNMAFDEKDVAESKTHTKMTFRCPVTIDNVFSAPTPTQVKVFYESRSSKGTPFDHLPKGEELAWTESFHDNKTLMGYIVYAQLFPKLLQNRIKLNAATYHWSHLDNSSEKGRTKLEQRRNAVDRLK 431 +KR K S + E VTTLDN AFD DVA +K+H KM+FRCPVTID+VF+ P P QV FYESR+ P+ HL + E+ W ES HDNKTLMG+IVYA LFPKLL+NRIKLNAATYHW+HLD+SS KGR KLEQRR AV RL+ Sbjct: 13 SKRAKRSGA--ERVTTLDNPAFDADDVAAAKSHAKMSFRCPVTIDSVFAPPAPDQVCTFYESRNHGSKPWGHLSEPEQREWAESCHDNKTLMGFIVYATLFPKLLRNRIKLNAATYHWAHLDSSSAKGRLKLEQRRGAVSRLR 153
BLAST of mRNA_L-elsbetiae_contig1883.5522.1 vs. uniprot
Match: A0A6H5JYT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYT1_9PHAE) HSP 1 Score: 159 bits (403), Expect = 3.640e-44 Identity = 83/153 (54.25%), Postives = 109/153 (71.24%), Query Frame = -3 Query: 3 ASSRANKRVKVSSSAKE-----SVTTLDNMAFDEKDVAESKTHTKMTFRCPVTIDNVFSAPTPTQVKVFYESRSSKGTPFDHLPKGEELAWTESFHDNKTLMGYIVYAQLFPKLLQNRIKLNAATYHWSHLDNSSEKGRTKLEQRRNAVDRLK 446 +++RA KR+K +S +KE SVT++ FD DV TH KMTF+ PVTI+ VF+AP+ QV+ FY SR S GTPFDHLP+ +LAWT S HD L+GYIVYAQ+FP L+NRIKLN A+YH++ LD +S +G+ KL QR+ A+ RLK Sbjct: 3 STARAAKRIKTASVSKEKKPVASVTSVHKQGFDASDVTVPTTHAKMTFKSPVTIETVFNAPSDAQVRQFYSSRCSSGTPFDHLPEHSKLAWTTSLHDVTALIGYIVYAQVFPSQLRNRIKLNTASYHYNALDGTSARGQIKLRQRQEALARLK 155
BLAST of mRNA_L-elsbetiae_contig1883.5522.1 vs. uniprot
Match: D7FL01_ECTSI (EsV-1-213 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL01_ECTSI) HSP 1 Score: 154 bits (389), Expect = 8.350e-39 Identity = 83/147 (56.46%), Postives = 101/147 (68.71%), Query Frame = -3 Query: 6 ANKRVKVS--SSAKESVTTLDNMAFD--EKDVAESKTHTKMTFRCPVTIDNVFSAPTPTQVKVFYESRSSKGTPFDHLPKGEELAWTESFHDNKTLMGYIVYAQLFPKLLQNRIKLNAATYHWSHLDNSSEKGRTKLEQRRNAVDRL 434 A KR+KV S A++++T L + D E +V SKTH +M FRCPVTI+ +F APT QV FY SR G F HL E++ W ES DN TLMG+IVY+QL P LL NRIKLN+ATYHW++LD +SEKGR KL QRR AV RL Sbjct: 7 APKRIKVRTISKARKAITNLTKLRLDGSESEVTVSKTHARMGFRCPVTIETIFDAPTEAQVVQFYSSRCPDGMSFSHLSNPEKIYWAESLRDNTTLMGFIVYSQLLPSLLTNRIKLNSATYHWAYLDPASEKGRIKLGQRREAVARL 153
BLAST of mRNA_L-elsbetiae_contig1883.5522.1 vs. uniprot
Match: A0A6H5K3P3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3P3_9PHAE) HSP 1 Score: 136 bits (343), Expect = 3.040e-35 Identity = 76/131 (58.02%), Postives = 86/131 (65.65%), Query Frame = -3 Query: 48 RANKRVKVSSSAKESVTTLDNMAFDEKDVAESKTHTKMTFRCPVTIDNVFSAPTPTQVKVFYESRS-SKGTPFDHLPKGEELAWTESFHDNKTLMGYIVYAQLFPKLLQNRIKLNAATYHWSHLDNSSEKG 437 RA KR K + A ++T+L N FDEK+ A++K H KM FRCPVTIDNVF AP V+VFYESR S F L E LAW ESF DNKTLMG+I+YA LFPKLL R KLNA TYHW S KG Sbjct: 6 RATKRAKTKA-ASPAITSLLNPTFDEKNFAKAKVHAKMCFRCPVTIDNVFRAPALEHVEVFYESRKKSTEKSFHQLSNTETLAWVESFMDNKTLMGFIIYAMLFPKLLHTRFKLNADTYHWDGSARSVFKG 135
BLAST of mRNA_L-elsbetiae_contig1883.5522.1 vs. uniprot
Match: Q8QN77_ESV1K (EsV-1-213 n=2 Tax=root TaxID=1 RepID=Q8QN77_ESV1K) HSP 1 Score: 143 bits (360), Expect = 1.950e-34 Identity = 76/147 (51.70%), Postives = 100/147 (68.03%), Query Frame = -3 Query: 3 SSRANKRVKVSSSAKESVTTLDNMAFDEKDVAESKTHTKMTFRCPVTIDNVFSAPTPTQVKVFYESRSSKGTPFDHLPKGEELAWTESFHDNKTLMGYIVYAQLFPKLLQNRIKLNAATYHWSHLDNSSEKGRTKLEQRRNAVDRLK 443 +S+A KR K+SSSA +TTL FD DVA TK+T++ PVT+ NVF PT +QVKVFY +R+ G PFD L E+L WTES HDN LMGY+VY+QL P +NR+KL + + HW+ L+ S+++ R LEQRR A DRL+ Sbjct: 2 ASQATKRTKLSSSA--GLTTLLRAGFDPSDVATLSPRTKVTYKSPVTLKNVFERPTESQVKVFYHARNHSGVPFDRLSDAEKLTWTESLHDNSCLMGYLVYSQLLPCAAENRVKLKSGSAHWNELNVSTDRAR--LEQRRAAYDRLR 144 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1883.5522.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1883.5522.1 >prot_L-elsbetiae_contig1883.5522.1 ID=prot_L-elsbetiae_contig1883.5522.1|Name=mRNA_L-elsbetiae_contig1883.5522.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=196bp MPCCRASSRILLLTMKLSRACWREKRPWLRMRLGGGPHSTPKLFTNNHGEback to top mRNA from alignment at L-elsbetiae_contig1883:10054..11008+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1883.5522.1 ID=mRNA_L-elsbetiae_contig1883.5522.1|Name=mRNA_L-elsbetiae_contig1883.5522.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=955bp|location=Sequence derived from alignment at L-elsbetiae_contig1883:10054..11008+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1883:10054..11008+ >mRNA_L-elsbetiae_contig1883.5522.1 ID=mRNA_L-elsbetiae_contig1883.5522.1|Name=mRNA_L-elsbetiae_contig1883.5522.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1176bp|location=Sequence derived from alignment at L-elsbetiae_contig1883:10054..11008+ (Laminarionema elsbetiae ELsaHSoW15)back to top |