Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | no signal peptide or anchor |
Exons | 2 |
Model size | 165 |
Cds size | 162 |
Stop | 0 |
Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815783.5410755-CDS-L-elsbetiae_contig1883:380..462 | 1622815783.5410755-CDS-L-elsbetiae_contig1883:380..462 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1883 381..462 + |
1691683099.872337-CDS-L-elsbetiae_contig1883:380..462 | 1691683099.872337-CDS-L-elsbetiae_contig1883:380..462 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1883 381..462 + |
1622815783.55121-CDS-L-elsbetiae_contig1883:1191..1271 | 1622815783.55121-CDS-L-elsbetiae_contig1883:1191..1271 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1883 1192..1271 + |
1691683099.8855824-CDS-L-elsbetiae_contig1883:1191..1271 | 1691683099.8855824-CDS-L-elsbetiae_contig1883:1191..1271 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1883 1192..1271 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1883.5520.1 >prot_L-elsbetiae_contig1883.5520.1 ID=prot_L-elsbetiae_contig1883.5520.1|Name=mRNA_L-elsbetiae_contig1883.5520.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=54bp
SAAFCVLPPTSSLCFRPFSGTHPRRREEVRQRDLSLFRRGEIARLGPLLI GRDP back to topmRNA from alignment at L-elsbetiae_contig1883:381..1272+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig1883.5520.1 ID=mRNA_L-elsbetiae_contig1883.5520.1|Name=mRNA_L-elsbetiae_contig1883.5520.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=892bp|location=Sequence derived from alignment at L-elsbetiae_contig1883:381..1272+ (Laminarionema elsbetiae ELsaHSoW15) TCCGCCGCGTTTTGTGTGCTGCCGCCTACATCCTCTCTCTGCTTCCGCCC
ATTTAGCGGCACACATCCACGGCGAAGGGAAGGTACGCGACGGGGCGTGA
AGCGGTGGCAGCTGTGAATAGACCCTCTCTGTGTGGTACACTGGTGCGTG
CGTGCGCTTGTGTATGTGTTTGGCCTAATCGCTTACAGAGATCCTGGGGG
ATAAACATAGCGGAGATGAAAGGCACAGAAAAAGCATGAGGGGGGTGCGG
ATCACGTTGGGTCTCTTGTCCCGCTCCTTTTTGCTGCCGCTACTGCTCGA
TGCTGCTGATTTGTGTCACTGGAGGTCTTAGATTCAGGATTAAGTAGGTA
AAACGCAGACAGGTGCGTTGGGGGTGTGCCGTTGCCCTGTAGATACCCAT
GTCGAATCTCTGTGCAAAGGGCAAGGGCAAAGGGAACCCTAAACTAATCT
CGAGAACCCTTCACGTGAAAAGGCACGCTGATGCGGACCTCTCCGTACCT
GTCTCGTATATCACAGCAATCCCGTGTAGGTAGACATCCGAAACACATTT
TTTCGAACTGCTGTGGCCCTGTCTTGTTTTTGTGTTGTGCGCGTAATATT
CATGGAGAATTTAGGAGTCGCGAGCAACAAAAAAGATGTACATTCAGCCT
TGACATACTCTGAAAATCTGGTCCAAGTCATCGGCTACGTGTGGTTGGGT
CATGTTGTAGCCGCGGCTTGCCAATTCCGCTTTTATCCCACTGAGATTCA
ACTCTCTCCCTCTCTGGTAACTCTCCCATTCTGACGCCCTTTTCGCGCTC
TCCTTCGCAAGAAGTACGCCAGCGCGACCTGTCCCTTTTTCGGCGCGGCG
AGATCGCGCGCTTGGGTCCGCTGCTGATTGGCAGAGATCCGT back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig1883:381..1272+ >mRNA_L-elsbetiae_contig1883.5520.1 ID=mRNA_L-elsbetiae_contig1883.5520.1|Name=mRNA_L-elsbetiae_contig1883.5520.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=324bp|location=Sequence derived from alignment at L-elsbetiae_contig1883:381..1272+ (Laminarionema elsbetiae ELsaHSoW15) TCCGCCGCGTTTTGTGTGCTGCCGCCTACATCCTCTCTCTGCTTCCGCCC ATTTAGCGGCACACATCCACGGCGAAGGGAAGTCCGCCGCGTTTTGTGTG CTGCCGCCTACATCCTCTCTCTGCTTCCGCCCATTTAGCGGCACACATCC ACGGCGAAGGGAAGAAGTACGCCAGCGCGACCTGTCCCTTTTTCGGCGCG GCGAGATCGCGCGCTTGGGTCCGCTGCTGATTGGCAGAGATCCGAAGTAC GCCAGCGCGACCTGTCCCTTTTTCGGCGCGGCGAGATCGCGCGCTTGGGT CCGCTGCTGATTGGCAGAGATCCG back to top
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