mRNA_L-elsbetiae_contig18779.5498.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig18779.5498.1 vs. uniprot
Match: D7FKR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKR3_ECTSI) HSP 1 Score: 195 bits (496), Expect = 8.820e-58 Identity = 93/119 (78.15%), Postives = 101/119 (84.87%), Query Frame = 1 Query: 1 RNWRLGGVAYEFGDQVYDEPNRTMISYAEGMMAL-----YSQEPWFCCRGFWLDIRVGPFITFGVDCERPNEYAEELFAVINKGTGTEQHRHNTAEVAVYSIISYLWGLETRGHYAMTK 342 R+WRL G+AYEFGDQVYD+PNRTM+SYAEGMM +E RGFWLDIRVGPFITFGVDC+RPN +AEELF V+NKGTGTEQHRHNTAEVAVYS ISYLWGLETRGHYAMTK Sbjct: 206 RSWRLEGIAYEFGDQVYDKPNRTMVSYAEGMMVKGEHRGLKKE----MRGFWLDIRVGPFITFGVDCDRPNPFAEELFNVLNKGTGTEQHRHNTAEVAVYSTISYLWGLETRGHYAMTK 320
BLAST of mRNA_L-elsbetiae_contig18779.5498.1 vs. uniprot
Match: A0A836CI43_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI43_9STRA) HSP 1 Score: 166 bits (420), Expect = 1.460e-46 Identity = 77/127 (60.63%), Postives = 98/127 (77.17%), Query Frame = 1 Query: 1 RNWRLGGVAYEFGDQVYDEPNRTMISYAEGMMALYSQEPWFC-CRGFWLDIRVGPFITFGVDCERPNEYAEELFAVINKGTGTEQHRHNTAEVAVYSIISYLWGLETRGHYAMTKKNDIFSGLGDDS 378 R WR G+A+EFGDQVYD PN TM+S+AEG++ RGFWLDIRVGPF+ FGVDC+RPN+ AE+LF V NKGTGTEQ+RHN AEVAVY+++SY+W ET Y M+K +DI+SGLG+++ Sbjct: 201 RKWRTNGIAFEFGDQVYDRPNLTMLSFAEGLVKSGEHRGRKKGVRGFWLDIRVGPFMPFGVDCDRPNKAAEDLFLVHNKGTGTEQYRHNFAEVAVYNLLSYMWEAETGTMYKMSKPHDIYSGLGEEA 327
BLAST of mRNA_L-elsbetiae_contig18779.5498.1 vs. uniprot
Match: W2Y0M8_PHYPR (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=W2Y0M8_PHYPR) HSP 1 Score: 154 bits (389), Expect = 7.200e-42 Identity = 71/131 (54.20%), Postives = 90/131 (68.70%), Query Frame = 1 Query: 1 RNWRLGGVAYEFGDQVYDEPNRTMISYAEGMMALYSQEPWFCCRGFWLDIRVGPFITFGVDCERPNEYAEELFAVINKGTGTEQHRHNTAEVAVYSIISYLWGLETRGHYAMTKKNDIFSGLGDDSSTALD 393 R+WR GVA+EFGDQ Y PNRTM +Y E + CRG W DI V P+I+FGV CE+PN + E+LF + NKGTG EQ+RHNT EVAVY+++SYL+ +ET Y M K++DIFSG+GD T D Sbjct: 236 RDWRNTGVAFEFGDQTYTVPNRTMAAYTEAKKKHHGS---VLCRGLWTDIIVSPYISFGVHCEKPNRFVEQLFEIHNKGTGVEQNRHNTVEVAVYNVLSYLYEIETGKRYQMGKEHDIFSGIGDAEGTPSD 363
BLAST of mRNA_L-elsbetiae_contig18779.5498.1 vs. uniprot
Match: A0A2D4CBB7_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBB7_PYTIN) HSP 1 Score: 152 bits (385), Expect = 1.730e-41 Identity = 69/124 (55.65%), Postives = 92/124 (74.19%), Query Frame = 1 Query: 1 RNWRLGGVAYEFGDQVYDEPNRTMISYAEGMMALYSQEPWFCCRGFWLDIRVGPFITFGVDCERPNEYAEELFAVINKGTGTEQHRHNTAEVAVYSIISYLWGLETRGHYAMTKKNDIFSGLGD 372 R WR GVA+EFGDQVY+EPNR+M +Y E A Q CRG W DI VGP+++FGVDC+R N++AE+LF + NKGTG EQ+RHNT EVAVY+++S L+ +ET Y M K +D++SG+G+ Sbjct: 197 RQWRNTGVAFEFGDQVYEEPNRSMAAYTE---ARKKQHGSVLCRGLWTDIVVGPYVSFGVDCDRTNKFAEQLFEIHNKGTGVEQNRHNTTEVAVYNVLSSLYEIETGVKYEMRKAHDVYSGIGE 317
BLAST of mRNA_L-elsbetiae_contig18779.5498.1 vs. uniprot
Match: A0A2D4CK38_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CK38_PYTIN) HSP 1 Score: 148 bits (373), Expect = 5.520e-41 Identity = 67/122 (54.92%), Postives = 89/122 (72.95%), Query Frame = 1 Query: 1 RNWRLGGVAYEFGDQVYDEPNRTMISYAEGMMALYSQEPWFCCRGFWLDIRVGPFITFGVDCERPNEYAEELFAVINKGTGTEQHRHNTAEVAVYSIISYLWGLETRGHYAMTKKNDIFSGL 366 R WR GVA+EFGDQVY+ PNR+M +Y E A Q CRG W DI VGP+++FGVDC+R N++AE+LF + NKGTG EQ+RHNT EVAVY+++S L+ +ET Y M K +D++SG+ Sbjct: 224 RQWRNTGVAFEFGDQVYEAPNRSMAAYTE---ARKKQHGSVLCRGLWTDIVVGPYVSFGVDCDRTNKFAEQLFEIHNKGTGVEQNRHNTTEVAVYNVLSSLYEIETGVKYEMRKAHDVYSGI 342
BLAST of mRNA_L-elsbetiae_contig18779.5498.1 vs. uniprot
Match: A0A833TSA7_PHYIN (Uncharacterized protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TSA7_PHYIN) HSP 1 Score: 151 bits (382), Expect = 8.040e-41 Identity = 68/124 (54.84%), Postives = 89/124 (71.77%), Query Frame = 1 Query: 1 RNWRLGGVAYEFGDQVYDEPNRTMISYAEGMMALYSQEPWFCCRGFWLDIRVGPFITFGVDCERPNEYAEELFAVINKGTGTEQHRHNTAEVAVYSIISYLWGLETRGHYAMTKKNDIFSGLGD 372 R+WR GVA+EFGDQ+Y PNRTM +Y E + CRG W DI V P+I+FGV CE+PN + E+LF + NKGTG EQ+RHNT EVAVY+++SYL+ +ET Y M +++DIFSG+GD Sbjct: 238 RDWRNSGVAFEFGDQMYTVPNRTMAAYTEAKNKHHKS---VLCRGLWTDIIVSPYISFGVHCEKPNRFVEQLFEIHNKGTGVEQNRHNTVEVAVYNVLSYLYEIETGKRYQMGEEHDIFSGIGD 358
BLAST of mRNA_L-elsbetiae_contig18779.5498.1 vs. uniprot
Match: A0A6A3NYA7_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3NYA7_9STRA) HSP 1 Score: 152 bits (383), Expect = 2.480e-40 Identity = 71/124 (57.26%), Postives = 90/124 (72.58%), Query Frame = 1 Query: 1 RNWRLGGVAYEFGDQVYDEPNRTMISYAEGMMALYSQEPWFCCRGFWLDIRVGPFITFGVDCERPNEYAEELFAVINKGTGTEQHRHNTAEVAVYSIISYLWGLETRGHYAMTKKNDIFSGLGD 372 R+WR GVA+EFGDQ Y PNRTM +Y E A Q+ CRG W DI V P+I+ GV CE+PN++AE+LF + NKGTG EQ+RHNT EVAVY+++SYL +ET Y M K++DIFSG+GD Sbjct: 409 RDWRNSGVAFEFGDQSYTVPNRTMAAYTE---AKKKQQGSVLCRGLWTDIIVSPYISLGVHCEKPNKFAEQLFEIHNKGTGVEQNRHNTVEVAVYNVLSYLHEIETGKMYKMEKEHDIFSGIGD 529
BLAST of mRNA_L-elsbetiae_contig18779.5498.1 vs. uniprot
Match: A0A329SL25_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SL25_9STRA) HSP 1 Score: 149 bits (376), Expect = 5.860e-40 Identity = 67/124 (54.03%), Postives = 88/124 (70.97%), Query Frame = 1 Query: 1 RNWRLGGVAYEFGDQVYDEPNRTMISYAEGMMALYSQEPWFCCRGFWLDIRVGPFITFGVDCERPNEYAEELFAVINKGTGTEQHRHNTAEVAVYSIISYLWGLETRGHYAMTKKNDIFSGLGD 372 R+WR GVA+EFGDQ Y PNRTM +Y E + CRG W DI V P+I+FGV CE+P+ + E+LF + NKGTG EQ+RHNT EVAV++++SYL+ +ET Y M K++DIFSG+GD Sbjct: 241 RDWRNSGVAFEFGDQTYTAPNRTMAAYTEAKKKHHGS---VLCRGLWTDIIVSPYISFGVHCEKPSRFVEQLFEIHNKGTGVEQNRHNTGEVAVFNVLSYLYEIETGKMYQMGKEHDIFSGIGD 361
BLAST of mRNA_L-elsbetiae_contig18779.5498.1 vs. uniprot
Match: A0A067CNW4_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CNW4_SAPPC) HSP 1 Score: 148 bits (374), Expect = 6.150e-40 Identity = 66/131 (50.38%), Postives = 92/131 (70.23%), Query Frame = 1 Query: 1 RNWRLGGVAYEFGDQVYDEPNRTMISYAEGMMALYSQEPWFCCRGFWLDIRVGPFITFGVDCERPNEYAEELFAVINKGTGTEQHRHNTAEVAVYSIISYLWGLETRGHYAMTKKNDIFSGLGDDSSTALD 393 + WR G+A+EFGDQ Y PNR+M SY E + CRGFWLDI VGP+I+FGVDC R N++A+ LF + NKG+G EQ+RHNTAEVAV++++S L +ET Y M K +D++SG+G+D + ++ Sbjct: 223 KEWRNSGIAFEFGDQTYTSPNRSMASYTEATKRGHGS---VLCRGFWLDITVGPYISFGVDCFRSNKFADGLFEIYNKGSGCEQNRHNTAEVAVFNVLSCLHEIETGDIYKMAKAHDVYSGIGEDDAKVVE 350
BLAST of mRNA_L-elsbetiae_contig18779.5498.1 vs. uniprot
Match: A0A0P1AZI3_PLAHL (Dynein assembly factor 3, C-terminal domain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AZI3_PLAHL) HSP 1 Score: 149 bits (375), Expect = 8.350e-40 Identity = 70/128 (54.69%), Postives = 89/128 (69.53%), Query Frame = 1 Query: 1 RNWRLGGVAYEFGDQVYDEPNRTMISYAEGMMALYSQEPWFCCRGFWLDIRVGPFITFGVDCERPNEYAEELFAVINKGTGTEQHRHNTAEVAVYSIISYLWGLETRGHYAMTKKNDIFSGLGDDSST 384 R+WR GVA+EFGDQ Y PNRTM +Y E + CRG W DI + P+I+FGV CE+PN + E+LF V NKGTG EQ+RHNT EVAVY+I+SYL+ +ET Y M K++DIFSG+G +T Sbjct: 241 RDWRNTGVAFEFGDQTYTMPNRTMAAYIEAKKRHHGS---VLCRGLWTDIIMSPYISFGVYCEKPNRFVEQLFEVHNKGTGVEQNRHNTVEVAVYNILSYLYEIETGKMYQMEKEHDIFSGIGGAENT 365 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18779.5498.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig18779.5498.1 >prot_L-elsbetiae_contig18779.5498.1 ID=prot_L-elsbetiae_contig18779.5498.1|Name=mRNA_L-elsbetiae_contig18779.5498.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=131bp RNWRLGGVAYEFGDQVYDEPNRTMISYAEGMMALYSQEPWFCCRGFWLDIback to top mRNA from alignment at L-elsbetiae_contig18779:479..1799+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig18779.5498.1 ID=mRNA_L-elsbetiae_contig18779.5498.1|Name=mRNA_L-elsbetiae_contig18779.5498.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1321bp|location=Sequence derived from alignment at L-elsbetiae_contig18779:479..1799+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig18779:479..1799+ >mRNA_L-elsbetiae_contig18779.5498.1 ID=mRNA_L-elsbetiae_contig18779.5498.1|Name=mRNA_L-elsbetiae_contig18779.5498.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=786bp|location=Sequence derived from alignment at L-elsbetiae_contig18779:479..1799+ (Laminarionema elsbetiae ELsaHSoW15)back to top |