mRNA_L-elsbetiae_contig18751.5490.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig18751.5490.1 vs. uniprot
Match: D7FVB8_ECTSI (CobW C-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVB8_ECTSI) HSP 1 Score: 163 bits (412), Expect = 2.100e-46 Identity = 75/86 (87.21%), Postives = 81/86 (94.19%), Query Frame = 1 Query: 1 RWLGGLLWDPPPGGTEVYRVKGVVSVEGRDERFVVQGVADLFEVAPAGVIGSAWLEGEARRCKVVFIGRMLSKQDLERGLRSCMLE 258 RWLGGLLWDPPPGGTEVYRVKGVVSVEGRDERFVVQGVADLFEV PA V+GSAW EGEARRCKVVFIGR+LS +DLE G+RSCM++ Sbjct: 386 RWLGGLLWDPPPGGTEVYRVKGVVSVEGRDERFVVQGVADLFEVTPAEVVGSAWQEGEARRCKVVFIGRLLSSRDLELGIRSCMVQ 471
BLAST of mRNA_L-elsbetiae_contig18751.5490.1 vs. uniprot
Match: A0A2I0HRN4_PUNGR (CobW C-terminal domain-containing protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0HRN4_PUNGR) HSP 1 Score: 77.4 bits (189), Expect = 1.670e-16 Identity = 39/84 (46.43%), Postives = 57/84 (67.86%), Query Frame = 1 Query: 4 WLGGLLWDPPPGGTEVYRVKGVVSVEGRDERFVVQGVADLFEVAPAGVIGSAWLEGEARRCKVVFIGRMLSKQDLERGLRSCML 255 WLG LL + ++YR+KG++SVEG +ERFV QGV D+F+ +P + W EAR K+VFIG+ L Q+LE+G ++C+L Sbjct: 38 WLGTLLLER---SEDIYRMKGLLSVEGMNERFVFQGVHDIFQGSPDRL----WGPDEARANKIVFIGKNLDAQELEKGFKACLL 114
BLAST of mRNA_L-elsbetiae_contig18751.5490.1 vs. uniprot
Match: A0A7I8LII8_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8LII8_SPIIN) HSP 1 Score: 80.5 bits (197), Expect = 8.680e-16 Identity = 39/84 (46.43%), Postives = 56/84 (66.67%), Query Frame = 1 Query: 4 WLGGLLWDPPPGGTEVYRVKGVVSVEGRDERFVVQGVADLFEVAPAGVIGSAWLEGEARRCKVVFIGRMLSKQDLERGLRSCML 255 WLG LL + ++YR+KG++SV+G +RFV QGV D+F+ +P W EGE R K+VFIGR L Q+LE+G ++C+L Sbjct: 388 WLGTLLLER---SDDIYRMKGIISVDGMSDRFVFQGVHDIFQGSP----DRPWREGEPRTNKLVFIGRNLDAQELEKGFKACLL 464
BLAST of mRNA_L-elsbetiae_contig18751.5490.1 vs. uniprot
Match: UPI00090135EB (uncharacterized protein LOC109165587 isoform X1 n=3 Tax=Ipomoea TaxID=4119 RepID=UPI00090135EB) HSP 1 Score: 79.7 bits (195), Expect = 1.620e-15 Identity = 40/84 (47.62%), Postives = 57/84 (67.86%), Query Frame = 1 Query: 4 WLGGLLWDPPPGGTEVYRVKGVVSVEGRDERFVVQGVADLFEVAPAGVIGSAWLEGEARRCKVVFIGRMLSKQDLERGLRSCML 255 WLG LL + ++YR+KG++SV+G DERFV QGV D+F+ +P WL EAR KVVFIG+ L ++LE+G ++C+L Sbjct: 386 WLGTLLMER---SEDIYRMKGLLSVQGMDERFVFQGVHDIFQGSP----DRPWLPDEARINKVVFIGKNLDSKELEQGFKACLL 462
BLAST of mRNA_L-elsbetiae_contig18751.5490.1 vs. uniprot
Match: A0A0A9JC14_ARUDO (CobW C-terminal domain-containing protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9JC14_ARUDO) HSP 1 Score: 73.9 bits (180), Expect = 1.910e-15 Identity = 36/85 (42.35%), Postives = 56/85 (65.88%), Query Frame = 1 Query: 4 WLGGLLWDPPPGGTEVYRVKGVVSVEGRDERFVVQGVADLFEVAPAGVIGSAWLEGEARRCKVVFIGRMLSKQDLERGLRSCMLE 258 WLG LL + ++YR+KG++SV G +RFV QGV D+F+ +P + W E R K+VFIGR L++++LE+G + C+L+ Sbjct: 9 WLGNLLLEC---SDDIYRMKGLLSVSGMPQRFVFQGVHDIFQGSPERM----WEPNEPRINKIVFIGRNLNREELEKGFKDCLLK 86
BLAST of mRNA_L-elsbetiae_contig18751.5490.1 vs. uniprot
Match: A0A498HCX9_MALDO (CobW C-terminal domain-containing protein n=1 Tax=Malus domestica TaxID=3750 RepID=A0A498HCX9_MALDO) HSP 1 Score: 74.3 bits (181), Expect = 2.710e-15 Identity = 37/84 (44.05%), Postives = 54/84 (64.29%), Query Frame = 1 Query: 4 WLGGLLWDPPPGGTEVYRVKGVVSVEGRDERFVVQGVADLFEVAPAGVIGSAWLEGEARRCKVVFIGRMLSKQDLERGLRSCML 255 WLG LL + ++YR+KG++SV+G +ERFV QGV D+F+ +P W E R K+VFIG+ L Q+LE+G + C+L Sbjct: 38 WLGTLLLER---SDDIYRMKGLLSVQGMNERFVFQGVHDIFQGSP----DRPWGPNEPRTNKIVFIGKNLDAQELEKGFKGCLL 114
BLAST of mRNA_L-elsbetiae_contig18751.5490.1 vs. uniprot
Match: A0A7J9B0U6_9ROSI (CobW C-terminal domain-containing protein n=1 Tax=Gossypium laxum TaxID=34288 RepID=A0A7J9B0U6_9ROSI) HSP 1 Score: 74.7 bits (182), Expect = 2.920e-15 Identity = 37/84 (44.05%), Postives = 57/84 (67.86%), Query Frame = 1 Query: 4 WLGGLLWDPPPGGTEVYRVKGVVSVEGRDERFVVQGVADLFEVAPAGVIGSAWLEGEARRCKVVFIGRMLSKQDLERGLRSCML 255 WLG LL + ++YR+KG++SV+G DERFV QGV D+F+ +P + W E R K+VFIG+ L+ ++LE+G ++C+L Sbjct: 55 WLGTLLLER---SEDIYRMKGLLSVQGMDERFVFQGVHDIFQGSPDRL----WGADEPRINKIVFIGKNLNAEELEKGFKACLL 131
BLAST of mRNA_L-elsbetiae_contig18751.5490.1 vs. uniprot
Match: A0A251RVL6_HELAN (Putative plastid transcriptionally active 17 n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251RVL6_HELAN) HSP 1 Score: 79.0 bits (193), Expect = 2.980e-15 Identity = 39/84 (46.43%), Postives = 56/84 (66.67%), Query Frame = 1 Query: 4 WLGGLLWDPPPGGTEVYRVKGVVSVEGRDERFVVQGVADLFEVAPAGVIGSAWLEGEARRCKVVFIGRMLSKQDLERGLRSCML 255 WLG LL D ++YR+KG++S+EG DERFV QGV D+F+ +P + W E R K+VFIG+ L Q+LE+G ++C+L Sbjct: 372 WLGTLLMDR---SEDIYRMKGLMSIEGMDERFVFQGVHDIFQGSPDRM----WKPDEPRVNKIVFIGKNLDAQELEKGFKTCLL 448
BLAST of mRNA_L-elsbetiae_contig18751.5490.1 vs. uniprot
Match: Q9FUB1_ARATH (PRLI-interacting factor L (Fragment) n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9FUB1_ARATH) HSP 1 Score: 77.0 bits (188), Expect = 3.530e-15 Identity = 36/84 (42.86%), Postives = 57/84 (67.86%), Query Frame = 1 Query: 4 WLGGLLWDPPPGGTEVYRVKGVVSVEGRDERFVVQGVADLFEVAPAGVIGSAWLEGEARRCKVVFIGRMLSKQDLERGLRSCML 255 WLG LL+ ++YR+KG++SV+ DERFV QGV ++FE +P + W + E R K+VFIG+ L++++LE G R+C++ Sbjct: 169 WLGALLYQR---NEDIYRMKGILSVQDMDERFVFQGVHEIFEGSPDRL----WRKDETRTNKIVFIGKNLNREELEMGFRACLI 245
BLAST of mRNA_L-elsbetiae_contig18751.5490.1 vs. uniprot
Match: A0A5N6LG54_9ASTR (CobW C-terminal domain-containing protein n=3 Tax=Asteraceae TaxID=4210 RepID=A0A5N6LG54_9ASTR) HSP 1 Score: 78.6 bits (192), Expect = 4.100e-15 Identity = 39/84 (46.43%), Postives = 56/84 (66.67%), Query Frame = 1 Query: 4 WLGGLLWDPPPGGTEVYRVKGVVSVEGRDERFVVQGVADLFEVAPAGVIGSAWLEGEARRCKVVFIGRMLSKQDLERGLRSCML 255 WLG LL D ++YR+KG++S+EG DERFV QGV D+F+ +P + W E R K+VFIG+ L Q+LE+G ++C+L Sbjct: 374 WLGTLLMDR---SEDIYRMKGLLSIEGMDERFVFQGVHDIFQGSPDRL----WNPDEPRVNKIVFIGKNLDAQELEKGFKTCLL 450 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18751.5490.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig18751.5490.1 >prot_L-elsbetiae_contig18751.5490.1 ID=prot_L-elsbetiae_contig18751.5490.1|Name=mRNA_L-elsbetiae_contig18751.5490.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=88bp RWLGGLLWDPPPGGTEVYRVKGVVSVEGRDERFVVQGVADLFEVAPAGVIback to top mRNA from alignment at L-elsbetiae_contig18751:2738..3001- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig18751.5490.1 ID=mRNA_L-elsbetiae_contig18751.5490.1|Name=mRNA_L-elsbetiae_contig18751.5490.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=264bp|location=Sequence derived from alignment at L-elsbetiae_contig18751:2738..3001- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig18751:2738..3001- >mRNA_L-elsbetiae_contig18751.5490.1 ID=mRNA_L-elsbetiae_contig18751.5490.1|Name=mRNA_L-elsbetiae_contig18751.5490.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=528bp|location=Sequence derived from alignment at L-elsbetiae_contig18751:2738..3001- (Laminarionema elsbetiae ELsaHSoW15)back to top |