mRNA_L-elsbetiae_contig1872.5475.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1872.5475.1 vs. uniprot
Match: A0A6H5JAN0_9PHAE (NYD-SP28 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JAN0_9PHAE) HSP 1 Score: 256 bits (655), Expect = 5.590e-79 Identity = 138/154 (89.61%), Postives = 143/154 (92.86%), Query Frame = 1 Query: 4 DPNRSAQAASSRPNKVPGTRVKAVLRLLSQEAGFLVDPGVKDALDAMTTDEAQLVSAVSMLKALGVEEESDIEELMRYFFGSDVAEPDGEDIPTMAAFRALGLDPDREPEALKVLLTIIQPDNVVSAIHSFVKDRKEARLLDQTRTKSLSLDDG 465 DPNR Q + KV GTRVKAVLRLLSQEAGFLVDPGVKDALDAMTTDEAQLVSAVSMLKALGVEE+SDIEELMRYFFGSDVAEPD EDIP+MA FRALGLDPDREP+ALKVLLTIIQPDNVVSAIH+FVKDRKEARLLDQTRTKSLSLDDG Sbjct: 494 DPNRPGQVVA----KVSGTRVKAVLRLLSQEAGFLVDPGVKDALDAMTTDEAQLVSAVSMLKALGVEEQSDIEELMRYFFGSDVAEPDAEDIPSMATFRALGLDPDREPDALKVLLTIIQPDNVVSAIHNFVKDRKEARLLDQTRTKSLSLDDG 643
BLAST of mRNA_L-elsbetiae_contig1872.5475.1 vs. uniprot
Match: A0A7S3XRL0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRL0_HETAK) HSP 1 Score: 93.6 bits (231), Expect = 4.370e-21 Identity = 51/138 (36.96%), Postives = 88/138 (63.77%), Query Frame = 1 Query: 49 VPGTRVKAVLRLLSQEAGFLVDPGVKDALDAMTTDEAQLVSAVSMLKALGVEEESDIEELMRYFFGSDVAEPDGEDIPTMAAFRALGLDPDREPEALKVLLTIIQPDNVVSAIHSFVKDRKEARLLDQTRTKSLSLDD 462 V G +++A++ L+ QE GFL+D + ALD + D+A++ A ++L ALGV+++ ++E L RYFF + D + PT + L L+ ++ P+ ++ L +II P++VV+A+ FV DR+E +LL + + SLDD Sbjct: 23 VSGAKIRAMVELIVQECGFLLDGQLTAALDRLPADQAEVRQAEALLAALGVKDQREVEALTRYFFRRGAEDED--EPPTGEDYNDLALEVEKVPDIVRQLKSIIGPEDVVAAVQQFVDDRREEKLLGKKAGTAASLDD 158
BLAST of mRNA_L-elsbetiae_contig1872.5475.1 vs. uniprot
Match: A0A835Z4S9_9STRA (Sperm tail-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4S9_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 5.960e-20 Identity = 67/158 (42.41%), Postives = 90/158 (56.96%), Query Frame = 1 Query: 19 AQAASSRPNKVPGTRVKAVLRLLSQEAGFLVDPG-VKDALDAMTTDEAQLVS-----AVSMLKALGVEEESDIEELMRYFFGSDVAEPDGEDIPTM------------AAFRALGLDPDREPEALKVLLTIIQPDNVVSAIHSFVKDRKEARLLDQTR 438 A AA+ R + G RV+AVL LL+ EA FLVD G ++DAL ++T + A + L+ALGV E D+ LM YFF A F ALGLDP+ EPEALK+L+TIIQPD+V++AI +FV D++EAR ++ R Sbjct: 460 ATAAAGR--AISGARVRAVLALLAAEANFLVDAGPLRDALASITATGGAAAAVRADAAEAALRALGVRGEGDLAALMAYFFPXXXXXXXXXXXXXXXXXXXXXXXXXDADFAALGLDPEAEPEALKLLITIIQPDDVIAAISAFVADQREARAMEAQR 615
BLAST of mRNA_L-elsbetiae_contig1872.5475.1 vs. uniprot
Match: A0A7S2S5S2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S5S2_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 6.170e-18 Identity = 56/121 (46.28%), Postives = 74/121 (61.16%), Query Frame = 1 Query: 49 VPGTRVKAVLRLLSQEAGFLVDPGVKDALDAMTTDEAQLVSAVSMLKALGVEEESDIEELMRYFFGSDVAEPDGEDIPTMAAFRALGLDPDREPEALKVLLTIIQPDNVVSAIHSFVKDRK 411 V G ++KA+++LL EAGFLVD VK+ALD+ +E++L A S+L+ALGVE E+D+E L+ YFF P+ ED G D D P+A L +I PD VV AI SFV RK Sbjct: 492 VSGAKMKAMMQLLVSEAGFLVDTKVKEALDSFLPEESELAQAESLLRALGVEHENDVEALLSYFF------PNPEDDEDNPLENPGGEDADA-PQAFLELQRLISPDGVVKAISSFVASRK 605
BLAST of mRNA_L-elsbetiae_contig1872.5475.1 vs. uniprot
Match: F0YK64_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YK64_AURAN) HSP 1 Score: 85.9 bits (211), Expect = 1.350e-16 Identity = 59/139 (42.45%), Postives = 81/139 (58.27%), Query Frame = 1 Query: 19 AQAASSRPNKVPGTRVKAVLRLLSQEAGFLVDPGVKDALDAMTTDEAQLVSAVSMLKALGVEEESDIEELMRYFF--GSDVAEPD--GEDIPTMAAFRALGLDPDREPEALKVLLTIIQPDNVVSAIHSFVKDRKEARL 423 A+ P K P +KA+L LLSQEAGFLV+ V++A+ ++ +EA+L A SML+ALGV +E D+ L+ +FF GSD GED P D P A + L IIQPD+VV AI +FV +R++ L Sbjct: 449 ARDGDDAPRKPPA--LKAMLELLSQEAGFLVESKVREAIARLSPEEAELAQAESMLRALGVADEDDVALLVSHFFSEGSDGGSESNLGEDGPAY----------DDPPAAFRSLQNIIQPDDVVRAIQAFVDERRDRAL 575
BLAST of mRNA_L-elsbetiae_contig1872.5475.1 vs. uniprot
Match: A0A8J2X138_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X138_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 5.490e-15 Identity = 53/133 (39.85%), Postives = 77/133 (57.89%), Query Frame = 1 Query: 13 RSAQAASSRPNKVPGTRVKAVLRLLSQEAGFLVDPGVKDALDAMTTDEAQLVSAVSMLKALGVEEESDIEELMRYFFGSDVAEPDGEDIPTMAAFRALGLDPDREPEALKVLLTIIQPDNVVSAIHSFVKDRK 411 R + ++RP KV G ++KA L LLS EAGFLV+ V+DALD + DEA+L A S+L+ALG +++DI L+ FF A+ +GE A + L T I+P++VV A SFV++R+ Sbjct: 442 RLEEEEAARP-KVSGAKLKACLELLSAEAGFLVEKKVRDALDELPEDEAELAQAESLLRALGARDDADILLLVSKFFSDGPADTEGEG-----------------DAAARALATRIKPEDVVGAAQSFVEERR 556
BLAST of mRNA_L-elsbetiae_contig1872.5475.1 vs. uniprot
Match: A0A1V9ZLF4_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZLF4_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 3.040e-13 Identity = 53/135 (39.26%), Postives = 80/135 (59.26%), Query Frame = 1 Query: 22 QAASSRPNKVPGTRVKAVLRLLSQEAGFLVDPGVKDALDAMTTDEAQLVSAVSMLKALGVEEESDIEELMRYFF--GSDVAEPDGEDIPTMAAFRALGLDPDREPEALKVLLTIIQPDNVVSAIHSFVKDRKEAR 420 Q A++ ++ ++K +L+LLS EAGFLV V++AL+AM DEA+LV A ++LK+LGVE E+D+E L+ +FF D A P G D+ + LGL I PD+V+ AI +FV++ E + Sbjct: 443 QTAAAPDRRISSAKLKYMLQLLSAEAGFLVHGPVREALEAMDDDEAELVRADAILKSLGVETEADMERLLSFFFHDARDDARP-GADLA-----KRLGLK--------------IHPDDVIQAIKAFVQELGEEK 557
BLAST of mRNA_L-elsbetiae_contig1872.5475.1 vs. uniprot
Match: A0A482RM41_9ARCH (NYD-SP28_assoc domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RM41_9ARCH) HSP 1 Score: 71.6 bits (174), Expect = 8.100e-12 Identity = 46/139 (33.09%), Postives = 79/139 (56.83%), Query Frame = 1 Query: 25 AASSRPNKVPGTRVKAVLRLLSQEAGFLVDPGVKDALDAMTTDEAQLVSAVSMLKALGVEEESDIEELMRYFF---GSDVAEPDGED--------IPTMAAFRA-LGLDPDREPEALKVLLTIIQPDNVVSAIHSFVKD 405 AA+ KV G RV+AVL++L+ EAGF+++P + +L+ + DEA + A +MLKALG++ E + L++YFF VAE G + F + L L E + L +I+P++V++A+ ++++D Sbjct: 34 AANQNKRKVAGFRVRAVLKMLASEAGFMINPLIAQSLETLPDDEADVSRAETMLKALGIKSEEKLHTLVQYFFVKKSEQVAEGIGNSNGEVGEGVVDEEGEFESELALLLRNSAEEVTKLKDMIRPEDVIAAVKAYIED 172
BLAST of mRNA_L-elsbetiae_contig1872.5475.1 vs. uniprot
Match: A0A8J5IKS5_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IKS5_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 6.140e-11 Identity = 44/135 (32.59%), Postives = 73/135 (54.07%), Query Frame = 1 Query: 16 SAQAASSRPNKVPGTRVKAVLRLLSQEAGFLVDPGVKDALDAMTTDEAQLVSAVSMLKALGVEEESDIEELMRYFFGSDVAEPDGEDIPTMAAFRALGLDPDREPEALKVLLTIIQPDNVVSAIHSFVKDRKEAR 420 S +A + K+ G ++K +L++L+ EAGFLV+ V+ ALD + DEA+LV A +++ALGV+ E D+E+LM YFF ED + + P ++ P++V+ I FV++ E + Sbjct: 482 SVEAYTPPVKKISGAKLKYMLKMLASEAGFLVNGSVQQALDNLPDDEAELVKADMIMRALGVDNEEDMEKLMGYFF---------EDPRQEVSVGGDNSKDNNSPSKDASWGLVVGPEDVIRVIKRFVEELNEQK 607
BLAST of mRNA_L-elsbetiae_contig1872.5475.1 vs. uniprot
Match: A0A8K1FH92_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FH92_PYTOL) HSP 1 Score: 68.6 bits (166), Expect = 1.470e-10 Identity = 46/130 (35.38%), Postives = 76/130 (58.46%), Query Frame = 1 Query: 46 KVPGTRVKAVLRLLSQEAGFLVDPGVKDALDAMTTDEAQLVSAVSMLKALGVEEESDIEELMRYFFGSDVAEPDGEDIP---TMAAFRALGLDPDREPEALKVLLTIIQPDNVVSAIHSFVKDRKEARLL 426 K+ T++K +LR+L+ EAGFLV+ V+ ALD + DEA+LV A +++ALG+++E+D+E LM +F+ AE IP T A L P ++ I++P++V+ FV++ E + L Sbjct: 475 KISSTKLKYMLRVLASEAGFLVNGNVQQALDNLPDDEAELVKADMIMRALGIDQENDMERLMGFFYEDPRAE-----IPQDYTNTNTPASQLVPTQKWGL------IVKPEDVIRVCKQFVEEMNEQKRL 593 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1872.5475.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1872.5475.1 >prot_L-elsbetiae_contig1872.5475.1 ID=prot_L-elsbetiae_contig1872.5475.1|Name=mRNA_L-elsbetiae_contig1872.5475.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=155bp EDPNRSAQAASSRPNKVPGTRVKAVLRLLSQEAGFLVDPGVKDALDAMTTback to top mRNA from alignment at L-elsbetiae_contig1872:16585..19089- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1872.5475.1 ID=mRNA_L-elsbetiae_contig1872.5475.1|Name=mRNA_L-elsbetiae_contig1872.5475.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2505bp|location=Sequence derived from alignment at L-elsbetiae_contig1872:16585..19089- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1872:16585..19089- >mRNA_L-elsbetiae_contig1872.5475.1 ID=mRNA_L-elsbetiae_contig1872.5475.1|Name=mRNA_L-elsbetiae_contig1872.5475.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=930bp|location=Sequence derived from alignment at L-elsbetiae_contig1872:16585..19089- (Laminarionema elsbetiae ELsaHSoW15)back to top |