mRNA_L-elsbetiae_contig1871.5470.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1871.5470.1 vs. uniprot
Match: D7FUZ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUZ2_ECTSI) HSP 1 Score: 338 bits (867), Expect = 2.850e-112 Identity = 224/286 (78.32%), Postives = 237/286 (82.87%), Query Frame = 1 Query: 25 QAAHSELARERAANEEAASRASKAERELDQARAKAAVLDNKLAALEKDKLELLADANASKARAGALEEKFSTARIAEAAAAEARXXXXXXXXXSLEREKTDAVSRMEEALAKAAXXXXXXXXAVKTEEEARAEMAGKTEEVMRLTAQRNSAKSRADSLAKDLSRVCGGGRTLDQIEIIVTKYADLKVKMAMMEAEKDGEADLKDEWQSDDKGGKGGGKGKVSEAAKRALRENTELHGRVAAMTETLQMRMHQLEGQRQSNEFLLKRVEELEQQVASTSGKMAIGTD 882 + AHSELA+ERA EEAA+RASKAERELDQARA+AAVLDNKLA LEKDKLELLADAN+S+ARA ALEEK+S AR AEA +E XXXXXXXXX XXXX AVK EE+ RAEMAGKTEEVMRLTAQRNSAKSRADSLAKDLSRVCGGGRTLDQIE IVTKYADLKVKMA MEAEKDG ADL DEWQS+ KG +G G KVSEAAKRALRENTELHGRVAAMTE+LQMR HQLEGQRQSNEFLLKRVEELEQQVA+TSGK AIGTD Sbjct: 96 EVAHSELAKERAGAEEAAARASKAERELDQARARAAVLDNKLATLEKDKLELLADANSSRARASALEEKYSAARAAEAVESEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRADKAVKMEEDTRAEMAGKTEEVMRLTAQRNSAKSRADSLAKDLSRVCGGGRTLDQIEAIVTKYADLKVKMATMEAEKDGAADLVDEWQSNSKGERGEGGRKVSEAAKRALRENTELHGRVAAMTESLQMRAHQLEGQRQSNEFLLKRVEELEQQVATTSGKTAIGTD 381
BLAST of mRNA_L-elsbetiae_contig1871.5470.1 vs. uniprot
Match: A0A6H5JZQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ7_9PHAE) HSP 1 Score: 340 bits (873), Expect = 2.540e-104 Identity = 225/284 (79.23%), Postives = 238/284 (83.80%), Query Frame = 1 Query: 31 AHSELARERAANEEAASRASKAERELDQARAKAAVLDNKLAALEKDKLELLADANASKARAGALEEKFSTARIAEAAAAEARXXXXXXXXXSLEREKTDAVSRMEEALAKAAXXXXXXXXAVKTEEEARAEMAGKTEEVMRLTAQRNSAKSRADSLAKDLSRVCGGGRTLDQIEIIVTKYADLKVKMAMMEAEKDGEADLKDEWQSDDKGGKGGGKGKVSEAAKRALRENTELHGRVAAMTETLQMRMHQLEGQRQSNEFLLKRVEELEQQVASTSGKMAIGTD 882 AHSELA+ERA EEA +RASKAERELDQARA+AAVL+NKLA LEKDKLELLADAN+S+ARA ALEEK+S AR AEAA + XXXXXXXXX E AV XXXX AVK EE+ RAEMAGKTEEVMRLTAQRNSAKSRADSLAKDLSRVCGGGRTLDQIE IVTKYADLKVKMA MEAEKDG ADL DEWQS+ KG +G G KVSEAAKRALRENTELHGRVAAMTE+LQMR HQLEGQRQSNEFLLKRVEELEQQVA+TSGK AIGTD Sbjct: 1057 AHSELAKERAGAEEAVARASKAERELDQARARAAVLENKLATLEKDKLELLADANSSRARASALEEKYSAARAAEAAESXXXXXXXXXXXXXXXSENLKAVXXXXXXXXXXXXXXXRADKAVKMEEDTRAEMAGKTEEVMRLTAQRNSAKSRADSLAKDLSRVCGGGRTLDQIEAIVTKYADLKVKMAAMEAEKDGAADLVDEWQSNSKGERGEGGRKVSEAAKRALRENTELHGRVAAMTESLQMRAHQLEGQRQSNEFLLKRVEELEQQVATTSGKTAIGTD 1340 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1871.5470.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1871.5470.1 >prot_L-elsbetiae_contig1871.5470.1 ID=prot_L-elsbetiae_contig1871.5470.1|Name=mRNA_L-elsbetiae_contig1871.5470.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=295bp MSLHGTGPQAAHSELARERAANEEAASRASKAERELDQARAKAAVLDNKLback to top mRNA from alignment at L-elsbetiae_contig1871:795..4886+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1871.5470.1 ID=mRNA_L-elsbetiae_contig1871.5470.1|Name=mRNA_L-elsbetiae_contig1871.5470.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4092bp|location=Sequence derived from alignment at L-elsbetiae_contig1871:795..4886+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1871:795..4886+ >mRNA_L-elsbetiae_contig1871.5470.1 ID=mRNA_L-elsbetiae_contig1871.5470.1|Name=mRNA_L-elsbetiae_contig1871.5470.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1770bp|location=Sequence derived from alignment at L-elsbetiae_contig1871:795..4886+ (Laminarionema elsbetiae ELsaHSoW15)back to top |