mRNA_L-elsbetiae_contig1869.5465.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1869.5465.1
Unique NamemRNA_L-elsbetiae_contig1869.5465.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1869.5465.1 vs. uniprot
Match: A0A6H5JQD1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQD1_9PHAE)

HSP 1 Score: 541 bits (1394), Expect = 7.980e-189
Identity = 283/363 (77.96%), Postives = 315/363 (86.78%), Query Frame = 1
Query:   10 SGLSLSEDALASIADLDDHPVEDNDAARADRMLAALESIPEDERQGLGLDVGDLRSKPLSERLVELEKLWAVRQQELREAYDAMPKVNELLTKRIEVLQDASATEDAVIGALVDLEDLLSDIDMARDFHTIGGFPALASMLRDSQPESVREIAAWAIGTAVKNEPGHQLWVLEAGPDSQPSALALLLENATTAKTPTLRSKIVYALSACLRNNGGVQLEFGSLRGETLLSAMYDAEGSDSRVKTKTLTLMSDLLQEAARGSPAAVLATVPVGSSSSSGGVWCRRVDEALQQAPSPGALEKAIEAVESFTHSCRIQFVELETKQRIQGLAQQCRTSPPAGLEEVGAEFQQELTQKLEDCALALR 1098
            S   LS +ALASIADLDDHP+EDNDAARADRMLAALESIPE ERQG+ LD   LRSKPL+ERL EL+ LW VRQQELREAYDAMPKVNELL +RI++L +A AT+ A+ GAL DLEDLLSDIDMARDFHTIGGFP LASMLR S+PE VRE+AAWA+GTAVKNEP HQLWVLE GPDSQPS LALLLENA  A TPTLRSK+VYALSACL NNG VQL+FGS  GE +LSAMYDA+GSD RV+ KTLTLMSDLLQEAARGSPAAVLAT+PVGS++SSGG WCRRVDEALQ A SP ALEKAIEAV+SFT SCR QF +L+TK+R++GLAQQCRTSPP G E    E+ +ELTQKLE+CA+ALR
Sbjct:   39 SPFDLSTEALASIADLDDHPIEDNDAARADRMLAALESIPEGERQGMDLDAEALRSKPLAERLAELQGLWEVRQQELREAYDAMPKVNELLMERIDILNNADATDGALTGALTDLEDLLSDIDMARDFHTIGGFPTLASMLRCSRPEGVRELAAWAVGTAVKNEPEHQLWVLEDGPDSQPSVLALLLENAMAATTPTLRSKVVYALSACLTNNGDVQLQFGSRMGEAVLSAMYDADGSDRRVRIKTLTLMSDLLQEAARGSPAAVLATMPVGSTASSGGAWCRRVDEALQHAHSPAALEKAIEAVQSFTPSCRDQFAQLDTKRRLEGLAQQCRTSPPEGFEVAEEEYHKELTQKLEECAVALR 401          
BLAST of mRNA_L-elsbetiae_contig1869.5465.1 vs. uniprot
Match: A0A835Z7K3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7K3_9STRA)

HSP 1 Score: 137 bits (346), Expect = 1.180e-31
Identity = 103/309 (33.33%), Postives = 148/309 (47.90%), Query Frame = 1
Query:   43 SIADLDDHPVEDNDAARADRMLAALESIPEDERQGLGLDVGDLRSKPLSERLVELEKLWAVRQQELREAYDAMPKVNELLTKRIEVLQDASATEDAVIGALVDLEDLLSDIDMARDFHTIGGFPALASMLRDSQPESVREIAAWAIGTAVKNEPGHQLWVLEAGP----DSQPS-----------------------------------------------------ALALLLENATTAKTPTLRSKIVYALSACLRNNGGVQLEFGSLRGETLL-----SAMYDAEGSDSRVKTKTLTLMSDLLQEAA 783
            SI  +DDHPV+D   AR  RML AL  +P +E++ + LD   + +   SER   L+ LW  RQ EL+E Y  MP   ++L   I +L+  ++ +  ++ AL+DLED LSD+DMARDFHT+GG+  L ++L   +  +VRE AAW IGTAVKN      W LE GP    D+  S                                                     A+  LLE    A+   L+ K +YAL++ LR+N   Q  F +  G   L     +A  D   +   + TK +TL+SD++ + A
Sbjct:   98 SIRGIDDHPVQDTPEARTQRMLEALLELPREEQERMQLDA--ILALDPSERPPALQALWERRQAELKEIYAGMPTPAKILGSLIAILRSEASGDAVLLDALLDLEDHLSDVDMARDFHTLGGWHPLQALLHAERAPAVREHAAWVIGTAVKNVIEFHGWALETGPAAAADASESVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAVAGAGDGLNAIDRLLECVADARHAGLQGKALYALASALRHNARAQAHFVTTGGLDALRNAAATAADDGGAAARGLLTKAITLVSDIVADEA 404          
BLAST of mRNA_L-elsbetiae_contig1869.5465.1 vs. uniprot
Match: A0A7R9U9J5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9J5_9STRA)

HSP 1 Score: 126 bits (316), Expect = 2.460e-28
Identity = 99/298 (33.22%), Postives = 150/298 (50.34%), Query Frame = 1
Query:   61 DHPVEDNDAARADRMLAALESIPEDERQGLGLDVGDLRSKPLSERLVELEKLWAVRQQELREAYDAMPKVNELLTKRIEVLQDASATEDAVIGALVDLEDLLSDIDMARDFHTIGGFPALASMLRDSQPESVREIAAWAIGTAVKNEPGHQLWVLE----AGPDSQPSALALLLENA--TTAKTPTLRSKIVYALSACLRNNGGVQLEFGSLRGETLLSAMYDAEGSDSRVKTKTLTLMSDLLQEAARGSPAAVLATVPVGSSSSSGGV----WCRRVDEALQQAPSPGALEKAIEAV 924
            + P    DA R + M  +L  +P+ E    G+   +L +    E    ++ +W  RQQ+LREA ++M     +  +RI VL  A ++E+ V+  L+ LED L DIDMARDFHT+GG+PAL  +L DS  E VR  AA  +G  V+N P  Q WV E    +  D + + +  LL +   ++A T   +SK + ALS  L N+      F  L G   L A+ D +  + R+  + + ++SDL  EAA      +   +        GG+    WCRR ++    A   G  ++  EAV
Sbjct:   89 EEPASAVDAGR-EMMKESLLKLPDAELARYGVTHAELSTPGAWED--RIDGIWQKRQQDLREAIESMGSHVNIFLERIMVLSAADSSEEDVMKVLLQLEDDLMDIDMARDFHTVGGWPALTGLLADSHAEDVRCQAALVVGNTVRNTPEFQAWVSEVPMGSAADVEEATMMHLLVSMMNSSASTAKEQSKALSALSGALYNHVENLQLFADLDGSAKLLALLD-DAVEDRLSLRAIRIVSDLAFEAAESGDEELKGLL--------GGIFDARWCRRTEDLASAAKGAGTDDRLSEAV 374          
BLAST of mRNA_L-elsbetiae_contig1869.5465.1 vs. uniprot
Match: W7TQS8_9STRA (Armadillo-like helical n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQS8_9STRA)

HSP 1 Score: 116 bits (291), Expect = 3.190e-24
Identity = 104/282 (36.88%), Postives = 142/282 (50.35%), Query Frame = 1
Query:   88 ARADRMLAALESIPEDERQGLGLDVGDLRSKP-----LSERLVE-------------LEKLWAVRQQELREAYDAMPKVNELLTKRIEVLQDASATEDAVIGALVDLEDLLSDIDMARDFHTIGGFPALASMLR-DSQPESVREI---AAWAIGTAVKNEPGHQLWVLEAGPDSQPSALALLL----ENATTA-----KTPTLRSKIVYALSACLRNNGGVQ---LEFGSLR--GETLLSAMYDAEGSDSRVK-------TKTLTLMSDLLQEAARGSPAAV 804
            +R   ML  L  +P  ER  +G+D   L S+P     L E +VE             +E LWA RQ  L +AY+ M K  E L + I VL++    E+ V+ AL++LED LSD+DMA+DF+T+GG+P L S L  +   E  RE+   AAW +G AVKN+   Q WVLE G +   SAL  LL    E  T A     +   L  K VYA+++  R N  VQ   +E G L   G  L S++  + GS  + K        K +    DL  EA +   AA+
Sbjct:  174 SRRGTMLKVLSGLPPQERASMGID-SLLASRPRAGEALGEEVVEGEEREEERAFWKQVETLWAERQDLLLQAYENMLKPAEELGRLIGVLKEGG--EEEVMRALMELEDWLSDVDMAQDFYTLGGWPLLVSKLGWEGGREGGREVQWRAAWVVGNAVKNDRHFQAWVLEGGKEGGASALTRLLTICREGGTEAWGEGEEEEELLRKAVYAVTSAARGNPAVQAKLVEEGGLEVLGHLLHSSVPPSPGSSHQRKGQRRALCLKLIAFAQDLALEAKQAVAAAL 452          
BLAST of mRNA_L-elsbetiae_contig1869.5465.1 vs. uniprot
Match: A0A7S2RJU1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJU1_9STRA)

HSP 1 Score: 105 bits (263), Expect = 5.410e-21
Identity = 74/206 (35.92%), Postives = 110/206 (53.40%), Query Frame = 1
Query:  205 LEKLWAVRQQELREAYDAMPKVNELLTKRIEVLQDASATEDAVIGALVDLEDLLSDIDMARDFHT-IGGFPALASMLRDSQPESVREIAAWAIGTAVKNEPGHQLWVLEAGPDSQP----------SALALLLENATTAKTPTLRSKIVYALSACLRNNGGVQLEFGSLRG----ETLLSAMYDAEGSDSRVKTKTLTLMSDLLQE 777
            L+ LW  RQ+EL+ A +AM +  + L+  I  ++  S  E++V  AL DLE+ LSD+DMARD H  +GG+P L  +L   Q   +R  AA  IGTA+KNEP  Q W+LE+  +S            S+L  +LE   T     +  + +YAL++ LR+N   Q  F  L G    + LL    D    +  + +K   L+ D+L+E
Sbjct:  121 LKVLWEQRQEELKAAMEAMQEAADTLSSIIRQIR--SGDEESVEAALADLEEHLSDVDMARDLHNALGGWPPLVRLLSSDQSPRIRAGAALVIGTAIKNEPVFQSWILESAAESVDVNPQQNETALSSLLGMLEEQGTGDVQVMHRRSMYALASALRHNLRNQAAFMELGGLERLQALLVKSCDGGLENPALVSKLAALVFDVLEE 324          
BLAST of mRNA_L-elsbetiae_contig1869.5465.1 vs. uniprot
Match: A0A7S1UMA0_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UMA0_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 2.320e-18
Identity = 76/242 (31.40%), Postives = 130/242 (53.72%), Query Frame = 1
Query:  115 LESIPEDERQGLGLDVGDLRSKPLSERLVELEKLWAVRQQELREAYDAMPKVNELLTKRIEVLQDASATEDAVIGALVDLEDLLSDIDMARDFHTIGGFPALASMLRDSQPESVREIAAWAIGTAVKNEPGHQLWV-------LE-----AGPDS--QPSALALLLEN-ATTAKTPTLRSKIVYALSACLRNNGGVQLEFGSLRGETLLSAMY----DAEGSDSRVKTKTLTLMSDLLQEAA 783
            L  +P+ E    G+   +L+++   E  V   ++W  RQ +L+ A +++   + + T  + VLQD +A+ + ++  L  + + L D+D+A DFH++GG+P +A++L +  PE VR  AA  I  +V+N P  Q WV       LE     AG D   + +AL LL +  ++++ TP  + K ++ALSA L N+     +F  L G   LSA+      A   DS++  + + + +DL  EAA
Sbjct:  172 LLGLPDSELSRYGISSAELQTEGAWEDRVA--EVWRKRQVDLKAAMESVADTHSIFTGYLGVLQDPAASAEELVAMLDVVAEQLMDVDLANDFHSMGGWPIVAALLAEEHPEGVRAAAAAVIADSVRNVPEFQGWVGVDKLGRLEVVGDDAGGDGSGEVTALDLLTDMFSSSSSTPKEQQKALFALSAALYNHPANLDKFLDLGGAAKLSAVLAPPEGAPKQDSKLIQRAINIAADLAFEAA 411          
BLAST of mRNA_L-elsbetiae_contig1869.5465.1 vs. uniprot
Match: A0A7S2FHY2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FHY2_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 2.640e-18
Identity = 93/290 (32.07%), Postives = 133/290 (45.86%), Query Frame = 1
Query:  103 MLAALESIPEDERQGLGLDVGDLRSKPLSERLVE--LEKLWAVRQQELREAYDAMPKVNELLTKRIEVLQDA----SATEDAVIGALVDLEDLLSDIDMARDFH-TIGGFPALASMLRDSQPESVREIAAWAIGTAVKNEPGHQLWVLEAGPDS------------QPSALALLLE-------------------NATTAKTPTL-----------RSKIVYALSACLRNNGGVQLEFGSLRGETLLSAMYDAEG----SDS-----------RVKTKTLTLMSDLLQEA 780
            M+  L ++P  E+  +G      +SK   E  +E  L  LW VRQ EL EA  A  +  + L   I+ L+      SA ++ V+ AL  LED LSD+DMARDFH  +GG+P+L ++L  +Q   VR  AA  +GTAVKN+   Q W+LE    S            + +ALALL                     + T    PTL           R K +YA+++ +R N   Q  F SL G + L    DAE     SD            +++ K  T+++D + EA
Sbjct:   52 MIRTLSALPVVEQDRIGFTALMDKSKASGEEALEADLRSLWEVRQVELEEAMAATEESADFLAALIKTLKSHVDSNSADDETVLDALNGLEDHLSDMDMARDFHDALGGWPSLTNLLLPTQSLQVRAAAALVMGTAVKNQDEFQGWILEPVALSLSTDTTSEEHMHEEAALALLTHMLVKGCTXXXXXXXXGTTTSVTLCNEPTLEESDPVGALAMRKKALYAIASGIRQNPHTQSLFLSLDGLSRLEHAADAEAEFAASDKHKKRPDHSSLWQLRLKLATMLADWITEA 341          
BLAST of mRNA_L-elsbetiae_contig1869.5465.1 vs. uniprot
Match: A0A7S3M316_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M316_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 1.320e-16
Identity = 60/138 (43.48%), Postives = 76/138 (55.07%), Query Frame = 1
Query:  295 EVLQDASATEDAVIGALVDLEDLLSDIDMARDFHTIGGFPALASMLRDSQPESVREIAAWAIGTAVKNEPGHQLWVLEAGPDSQP-------SALALLLENATTAKTPT---------LRSKIVYALSACLRNNGGVQ 660
            E  Q A  T D  +  L  LE LL D+D ARDFHTIGG+P L S L+ SQP  VR +AA A+GTA+KN   +QLW LE+   S         S L LL+E   T++            L+ + +YALSA +R N  VQ
Sbjct:  199 ETKQVADLTTDDKVYLLRQLESLLDDVDNARDFHTIGGWPTLLSHLKASQPLQVRSVAALAVGTAIKNTYDYQLWTLESPASSTTDSGALVVSGLDLLIEALGTSENTAEEIASDRFELQKRALYALSAAMRGNMDVQ 336          
BLAST of mRNA_L-elsbetiae_contig1869.5465.1 vs. uniprot
Match: A0A6G0XBA7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XBA7_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 3.640e-15
Identity = 74/232 (31.90%), Postives = 118/232 (50.86%), Query Frame = 1
Query:  103 MLAALESIPEDERQGLGLDVGDLRSKPLSERL-VELEKLWAVRQQELREAYDAMPKVNELLTKRIEVLQ-----DASATEDAVIGALVDLEDLLSDIDMARDFHTIGGFPALASMLRDSQPESVREIAAWAIGTAVKNEPGHQLWVLEAGPDSQP---SALALLLENATTAKTPTLRSKIVYALSACLRNNGGVQLEFGSLRGETLLSAMYDAEGSDSRVKTKTLTLMSDLL 771
            +  AL  +PE      G+++ +   K   E+    + KLWA RQ+EL+EA  ++    + +   I+ L      DA   E  V+ AL  LE  + D+D A+DF+T+GG  A    L  S    VR +AAW +G+AVK+    Q W L+AG  + P   ++L+++      A    ++ K++YALSA ++ N   Q  F    G  +LS +  A  SD+ ++ K + L   LL
Sbjct:  134 LYNALAQLPEPPEMD-GMNIHEAYGKLTKEQFSAYIAKLWAKRQEELKEATASIRDEAKYMQGLIDTLVTPSSGDADIHEANVVDALQHLEWEVQDLDKAKDFNTMGGLEATVQYLNASSYR-VRTMAAWVVGSAVKHYDQAQEWALQAG--AMPLILNSLSIVPNEEDRASVLAMQKKMLYALSALVQANTKAQSLFARNDGVVILSNLLKA--SDTPLQHKIIVLAQHLL 359          
BLAST of mRNA_L-elsbetiae_contig1869.5465.1 vs. uniprot
Match: A0A7S0J9D3_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J9D3_9EUKA)

HSP 1 Score: 88.2 bits (217), Expect = 3.670e-15
Identity = 68/196 (34.69%), Postives = 103/196 (52.55%), Query Frame = 1
Query:  217 WAVRQQELREAYDAMPKVNELLTKRIEVLQDA-------SATEDAVIGALVDLEDLLSDIDMARDFHTIGGFPALASMLRDSQPESVREIAAWAIGTAVKNEPGHQLWVLEAGPDSQPSALALLLENATTAKTPTLRSKIVYALSACLRNNGGVQLEFGSLRGETLLSAMYDAEGSDSRVKTKTLTLMSDLLQEAA 783
            +A R++EL    +AM         ++++++DA       S   D    AL  L++L+ D+D ARDF TIGGF  +  +L    PE V    AW +GTAV+N+   QL +LE         +A LL+         +R+K++YA+S  LRN    QL+F   +G ++L  M  A  S  R+  K L L++DLL E+A
Sbjct:  129 FAARRKELSTVAEAM------FANQVDLMRDAMHAALNRSLAADVREEALFALQELVEDLDNARDFMTIGGFKQVMELLGSDTPELVAA-TAWVVGTAVQNQRELQLHMLEL------ELMAPLLQLLHDHSAIDVRAKVLYAVSGLLRNCPEAQLDFRRRQGVSVL-VMTLARDSSPRLMRKALVLLTDLLSESA 310          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1869.5465.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JQD1_9PHAE7.980e-18977.96Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z7K3_9STRA1.180e-3133.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9U9J5_9STRA2.460e-2833.22Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
W7TQS8_9STRA3.190e-2436.88Armadillo-like helical n=2 Tax=Monodopsidaceae Tax... [more]
A0A7S2RJU1_9STRA5.410e-2135.92Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1UMA0_9STRA2.320e-1831.40Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S2FHY2_9STRA2.640e-1832.07Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S3M316_9STRA1.320e-1643.48Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A6G0XBA7_9STRA3.640e-1531.90Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A7S0J9D3_9EUKA3.670e-1534.69Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1869contigL-elsbetiae_contig1869:6601..9537 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score500.4
Seed ortholog evalue6.7e-139
Seed eggNOG ortholog2880.D7FW70
KEGG koko:K14001,ko:K15196
KEGG Pathwayko04141,map04141
Hectar predicted targeting categoryother localisation
EggNOG free text desc.adenyl-nucleotide exchange factor activity
EggNOG OGsCOG0197@1,KOG2160@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03021,ko03029
Ec32 ortholog descriptionArmadillo-type fold
Ec32 orthologEc-01_003620.1
Exons2
Model size1463
Cds size999
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1869.5465.1prot_L-elsbetiae_contig1869.5465.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1869 6703..9175 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815778.01262-UTR-L-elsbetiae_contig1869:6600..67021622815778.01262-UTR-L-elsbetiae_contig1869:6600..6702Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1869 6601..6702 +
1691683096.006553-UTR-L-elsbetiae_contig1869:6600..67021691683096.006553-UTR-L-elsbetiae_contig1869:6600..6702Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1869 6601..6702 +
1622815778.0647767-UTR-L-elsbetiae_contig1869:9175..95371622815778.0647767-UTR-L-elsbetiae_contig1869:9175..9537Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1869 9176..9537 +
1691683096.0328226-UTR-L-elsbetiae_contig1869:9175..95371691683096.0328226-UTR-L-elsbetiae_contig1869:9175..9537Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1869 9176..9537 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815778.029691-CDS-L-elsbetiae_contig1869:6702..71281622815778.029691-CDS-L-elsbetiae_contig1869:6702..7128Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1869 6703..7128 +
1691683096.0166712-CDS-L-elsbetiae_contig1869:6702..71281691683096.0166712-CDS-L-elsbetiae_contig1869:6702..7128Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1869 6703..7128 +
1622815778.045959-CDS-L-elsbetiae_contig1869:8602..91751622815778.045959-CDS-L-elsbetiae_contig1869:8602..9175Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1869 8603..9175 +
1691683096.0247688-CDS-L-elsbetiae_contig1869:8602..91751691683096.0247688-CDS-L-elsbetiae_contig1869:8602..9175Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1869 8603..9175 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1869.5465.1

>prot_L-elsbetiae_contig1869.5465.1 ID=prot_L-elsbetiae_contig1869.5465.1|Name=mRNA_L-elsbetiae_contig1869.5465.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=333bp
MLAALESIPEDERQGLGLDVGDLRSKPLSERLVELEKLWAVRQQELREAY
DAMPKVNELLTKRIEVLQDASATEDAVIGALVDLEDLLSDIDMARDFHTI
GGFPALASMLRDSQPESVREIAAWAIGTAVKNEPGHQLWVLEAGPDSQPS
ALALLLENATTAKTPTLRSKIVYALSACLRNNGGVQLEFGSLRGETLLSA
MYDAEGSDSRVKTKTLTLMSDLLQEAARGSPAAVLATVPVGSSSSSGGVW
CRRVDEALQQAPSPGALEKAIEAVESFTHSCRIQFVELETKQRIQGLAQQ
CRTSPPAGLEEVGAEFQQELTQKLEDCALALR*
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mRNA from alignment at L-elsbetiae_contig1869:6601..9537+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1869.5465.1 ID=mRNA_L-elsbetiae_contig1869.5465.1|Name=mRNA_L-elsbetiae_contig1869.5465.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2937bp|location=Sequence derived from alignment at L-elsbetiae_contig1869:6601..9537+ (Laminarionema elsbetiae ELsaHSoW15)
GCACAGGGCAGCGGCCTCAGCCTCAGCGAGGATGCCCTGGCATCTATCGC CGATCTAGATGATCACCCCGTGGAAGACAACGACGCTGCCCGAGCTGACC GCATGCTAGCAGCTTTGGAGTCCATCCCGGAAGACGAGCGCCAAGGCTTG GGGCTGGACGTGGGGGATTTACGGTCGAAGCCCCTCTCGGAGAGACTGGT GGAGCTGGAGAAGCTGTGGGCAGTGCGCCAGCAGGAACTCCGTGAGGCGT ACGATGCGATGCCTAAGGTTAACGAACTGTTGACCAAACGAATCGAAGTC CTGCAAGATGCGAGTGCAACCGAAGATGCGGTGATCGGGGCCCTCGTCGA TCTGGAGGACCTGCTCTCGGACATCGACATGGCAAGGGATTTCCACACCA TCGGGGGATTCCCTGCGCTGGCTTCCATGCTCCGCGATTCGCAACCAGAA AGTGTTCGCGAGATAGCGGCATGGGCAATCGGAACTGCTGTTAAAAACGA GCCGGGGCATCAGCTATGGGTATTGGAGGTAGGACAACGGACTGCTGCGG TGTTGACAATAAACCACCTTGACTGAACGTACTCAGAGCATCCAGCCAAC TTTTCAAAGTGAACGTCTCGTTCAGCGTCTAATACAGTAGACTGAGAGTA AAGGTAGCTGTGGCACCTTTTGGAGAGAGTTGAACCAAAGCACATGCTCA GTCGTCACCACTTCTTACACACACGCCAAACATTAGAACATGCGTCGCGA GTCGCGAGCGTCCTGCCGTCTTGGCGTCGTCGGGACCGAGCTTGGCCCAC CCGTCACAAGACATCGCGAGCACTTGGATATGGGAGGCTCAATGTACACA GTAGTTCTGAGGCGCACCATTCCACACCCGTCTTAGAATGTACATAAAGC AGCCGCACGCTCAAATCTGCTGTATGGTGCTTCTTCACGTGTCAGGCTTT ATCAAACGCTTTGCTGCTAAATATTTTAGTTATGTACACGGCCGATCTCC TCGGAAAGAGCAATTCCGACTTCAGATGAGTGTTTTTGCCCCTCTATGAT TTAACATGTCATTTTAGTGGAGTTGGTCTCGTAAGCGTAACGGCATAGTG TCTTCAAAATTGATTGACGTGTTAGACTTTTCGATGTTTGAAGTAAAAGT TACTTATTATTTTGTACTCTCTCCCGGAGTGTTTGTTGTTGTCTTCACAT TAAAACCGTTCCGATCTCTCTGTCCAGTACCTCCATGAGTCGTTCTAATC CAACACTGACGCAGTCGGTTCTCGTGGTCACAGGATAACTTACCCTAAAA AGGGTATACTGAAAAAAAGAAACTAAATCAAATGGACCCGAAGGGTCCAC ACAAAGCACAAAAAAACAAAAGATCAGACACAGCCGCTCCCCTCTACACG CTGTGTGGGTTGAAAACAAAAGTGAAAAAGCCAACATCACCAACCGCAGG GGATACAACCCCTGGTTCTATCTTGGTACCCCAACGATGCCGGGGTGTTC CGCGCCGGGTTCTCGCCGGTCAGGCCCACTAATCTAGTCCTCCCCACTCA TTGTACCGCACACATGATTACAATTACAGCAAGGAAGAAGAGAACATCGG ACACTACAAGTCGAAGTACAAATAAATAAACAAAACCAAACGAACAAACA AACACTCATAAAAAAAAACAGACAAGCACGTCATCGCTCCCCCGGCATGT TGCAAGATAGCACAGTAGTAGGGGGGGGGTGGGAGGGGGGAGATTAGTCA AGAATCCAACGCCTCCGCCTTCTTGAATGCGTCGCGCGCAGCTCCGATCG CCTCTGGCCCCTTTCCCCCGTTGGTTGTTGCCGCGTCTATTTATTGCTGG GCCCTATTTTGTCTCGTTTGATCGCCCGTTGTCGGCTAGCCTCCTCCTCC TTCTTGTGCCAGGAGGCCATAAACCTCTCAGCTCTCCGCAATGTTTCATG ATAATCCACCGCGCCACCCGCCCGTCAACTGCGTCTTCGAATTGGAAAGC AGGCAGGCCCTGATTCTCAGCCTTCGGCGCTGGCTCTTTTGCTGGAAAAT GCAACGACCGCCAAGACCCCTACTTTGAGGAGCAAGATAGTCTACGCGCT TTCGGCGTGCTTGAGAAACAATGGTGGTGTTCAGCTTGAGTTTGGCTCGT TGAGAGGGGAGACCTTACTTTCAGCAATGTACGATGCGGAAGGTTCTGAT TCCCGTGTCAAAACGAAGACACTCACCCTCATGTCCGATTTGCTCCAAGA GGCCGCAAGAGGCTCGCCGGCAGCTGTTCTAGCTACTGTTCCTGTCGGTT CGAGCTCTTCGTCGGGTGGGGTCTGGTGTCGCCGAGTAGATGAAGCGCTG CAGCAGGCACCCTCTCCAGGTGCATTGGAGAAGGCGATCGAAGCGGTCGA GTCTTTTACACACTCGTGCAGAATTCAATTCGTGGAACTAGAGACGAAGC AGCGAATACAGGGTTTAGCCCAGCAATGCCGCACGTCACCTCCGGCGGGG TTAGAAGAAGTGGGAGCAGAATTTCAGCAGGAGCTGACCCAGAAACTCGA AGACTGTGCGCTCGCGCTCCGATGACGATCAACTTGCATTTCCAATTTAG GGGTGTGTATACCTTTACGATATTGCAAGTGCCAGAGCGTGTTTCAATTG GTGGATAACTTATAAGTTCCGGTCATTTTCGTATGTAGGAACAAGTGTTG CTATTTACATTGATCCAACAGGCTTGGAGTTAACGCGGCATTGCGCACGA AAGAAACCATGTGAACGCGTGTCGTAGAGCACGTCCAGACTGCGTGGGCA ACGGTTCCGTTGAAATTGCTGAGGTGAACACGTGAGTGAGACAGATTTCC CCCCCGTTTCAACAACGCTGTTGCCGCGGAGCCGATTCATCTCGGTGAAC AGCTCACCGCAGGACGAAGAGACAACCTGTGCCCTGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1869:6601..9537+

>mRNA_L-elsbetiae_contig1869.5465.1 ID=mRNA_L-elsbetiae_contig1869.5465.1|Name=mRNA_L-elsbetiae_contig1869.5465.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1998bp|location=Sequence derived from alignment at L-elsbetiae_contig1869:6601..9537+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCTAGCAGCTTTGGAGTCCATCCCGGAAGACGAGCGCCAAGGCTTGGG
GCTGGACGTGGGGGATTTACGGTCGAAGCCCCTCTCGGAGAGACTGGTGG
AGCTGGAGAAGCTGTGGGCAGTGCGCCAGCAGGAACTCCGTGAGGCGTAC
GATGCGATGCCTAAGGTTAACGAACTGTTGACCAAACGAATCGAAGTCCT
GCAAGATGCGAGTGCAACCGAAGATGCGGTGATCGGGGCCCTCGTCGATC
TGGAGGACCTGCTCTCGGACATCGACATGGCAAGGGATTTCCACACCATC
GGGGGATTCCCTGCGCTGGCTTCCATGCTCCGCGATTCGCAACCAGAAAG
TGTTCGCGAGATAGCGGCATGGGCAATCGGAACTGCTGTTAAAAACGAGC
CGGGGCATCAGCTATGGGTATTGGAGATGCTAGCAGCTTTGGAGTCCATC
CCGGAAGACGAGCGCCAAGGCTTGGGGCTGGACGTGGGGGATTTACGGTC
GAAGCCCCTCTCGGAGAGACTGGTGGAGCTGGAGAAGCTGTGGGCAGTGC
GCCAGCAGGAACTCCGTGAGGCGTACGATGCGATGCCTAAGGTTAACGAA
CTGTTGACCAAACGAATCGAAGTCCTGCAAGATGCGAGTGCAACCGAAGA
TGCGGTGATCGGGGCCCTCGTCGATCTGGAGGACCTGCTCTCGGACATCG
ACATGGCAAGGGATTTCCACACCATCGGGGGATTCCCTGCGCTGGCTTCC
ATGCTCCGCGATTCGCAACCAGAAAGTGTTCGCGAGATAGCGGCATGGGC
AATCGGAACTGCTGTTAAAAACGAGCCGGGGCATCAGCTATGGGTATTGG
AGGCAGGCCCTGATTCTCAGCCTTCGGCGCTGGCTCTTTTGCTGGAAAAT
GCAACGACCGCCAAGACCCCTACTTTGAGGAGCAAGATAGTCTACGCGCT
TTCGGCGTGCTTGAGAAACAATGGTGGTGTTCAGCTTGAGTTTGGCTCGT
TGAGAGGGGAGACCTTACTTTCAGCAATGTACGATGCGGAAGGTTCTGAT
TCCCGTGTCAAAACGAAGACACTCACCCTCATGTCCGATTTGCTCCAAGA
GGCCGCAAGAGGCTCGCCGGCAGCTGTTCTAGCTACTGTTCCTGTCGGTT
CGAGCTCTTCGTCGGGTGGGGTCTGGTGTCGCCGAGTAGATGAAGCGCTG
CAGCAGGCACCCTCTCCAGGTGCATTGGAGAAGGCGATCGAAGCGGTCGA
GTCTTTTACACACTCGTGCAGAATTCAATTCGTGGAACTAGAGACGAAGC
AGCGAATACAGGGTTTAGCCCAGCAATGCCGCACGTCACCTCCGGCGGGG
TTAGAAGAAGTGGGAGCAGAATTTCAGCAGGAGCTGACCCAGAAACTCGA
AGACTGTGCGCTCGCGCTCCGATGAGCAGGCCCTGATTCTCAGCCTTCGG
CGCTGGCTCTTTTGCTGGAAAATGCAACGACCGCCAAGACCCCTACTTTG
AGGAGCAAGATAGTCTACGCGCTTTCGGCGTGCTTGAGAAACAATGGTGG
TGTTCAGCTTGAGTTTGGCTCGTTGAGAGGGGAGACCTTACTTTCAGCAA
TGTACGATGCGGAAGGTTCTGATTCCCGTGTCAAAACGAAGACACTCACC
CTCATGTCCGATTTGCTCCAAGAGGCCGCAAGAGGCTCGCCGGCAGCTGT
TCTAGCTACTGTTCCTGTCGGTTCGAGCTCTTCGTCGGGTGGGGTCTGGT
GTCGCCGAGTAGATGAAGCGCTGCAGCAGGCACCCTCTCCAGGTGCATTG
GAGAAGGCGATCGAAGCGGTCGAGTCTTTTACACACTCGTGCAGAATTCA
ATTCGTGGAACTAGAGACGAAGCAGCGAATACAGGGTTTAGCCCAGCAAT
GCCGCACGTCACCTCCGGCGGGGTTAGAAGAAGTGGGAGCAGAATTTCAG
CAGGAGCTGACCCAGAAACTCGAAGACTGTGCGCTCGCGCTCCGATGA
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