mRNA_L-elsbetiae_contig18644.5452.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig18644.5452.1
Unique NamemRNA_L-elsbetiae_contig18644.5452.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig18644.5452.1 vs. uniprot
Match: A0A6H5JQ17_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ17_9PHAE)

HSP 1 Score: 364 bits (935), Expect = 1.320e-118
Identity = 214/303 (70.63%), Postives = 240/303 (79.21%), Query Frame = 1
Query:   61 MTTRTIKINFQGASRDVDLPSPFTLAGLQQAIASTFGTELPARSGADEAAKDGDLSFTYKDPEGDDIVFDKDSELHLALRLCPSSLEIAAALKET-PAKKPDPERRLYQLAARNLREYNGVPSMTPAKLIKTLAFLKLNPRRLVKQGLAPKVLLARMAADAKKNTGPAQTQPLGGDQSGNEDLAESVAAAGVGLMSVEDDKKEWNDGFVSVESDSAAPATEESGGADHTAAAAKDGKHGTAAAAPAEKKKDALHEAFIAGGIQLRPREARPLLLALDVRPLRLVKLGYVDGKYLRRMLNNEKQ 966
            MTT +IKINFQGASRDV++P+P +LA LQ AIA+ F  ELP RS A EAAKD DLSFTYKDP+GDDIVFDKDSEL LA+RLCPSSLEI+A LKE+ PAKKPDPE RLY++AARNLREYNGVPSMT  KLIKTLAFLKLNP+RLVKQGLAPKVLLARM A+A  N   ++  PLG D   NEDLAESVAA G+ LMSVEDDKKEWNDGFVS ESD++A A   +     T+    D +     AAP E KKD +H+AFI GGIQLRPRE RPLL+ALDVRP RL KLG VDGK LR ML  EK+
Sbjct:   19 MTTPSIKINFQGASRDVNVPAPVSLASLQAAIAAAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISATLKESEPAKKPDPEARLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKV-PLG-DGKNNEDLAESVAA-GMELMSVEDDKKEWNDGFVSAESDASAAAVPITA---KTSTPDNDNEEENNDAAP-ETKKDLIHKAFITGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDLRAMLRAEKK 314          
BLAST of mRNA_L-elsbetiae_contig18644.5452.1 vs. uniprot
Match: D8LN68_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN68_ECTSI)

HSP 1 Score: 354 bits (908), Expect = 1.020e-114
Identity = 210/303 (69.31%), Postives = 233/303 (76.90%), Query Frame = 1
Query:   61 MTTRTIKINFQGASRDVDLPSPFTLAGLQQAIASTFGTELPARSGADEAAKDGDLSFTYKDPEGDDIVFDKDSELHLALRLCPSSLEIAAALKET-PAKKPDPERRLYQLAARNLREYNGVPSMTPAKLIKTLAFLKLNPRRLVKQGLAPKVLLARMAADAKKNTGPAQTQPLGGDQSGNEDLAESVAAAGVGLMSVEDDKKEWNDGFVSVESDSAAPATEESGGADHTAAAAKDGKHGTAAAAPAEKKKDALHEAFIAGGIQLRPREARPLLLALDVRPLRLVKLGYVDGKYLRRMLNNEKQ 966
            MTT +IKINFQG SRDV++P P TLA LQ AIA  F  ELP RS A EAAKD DLSFTYKDP+GDDIVFDKDSEL+LA+RLCP SLEI+AA KE  PA KPDPE RLY++AARNLREYNGVPSMTP KL+KTLAFL+LNP+RLVKQGLAPKVLLARM A+A  N   ++  PLG D   NEDLAESVAA G+ LMSVEDDKKEWNDGFVSVE     PA   S G         D +    A AP E KK+ +H+AFIAGGIQLRPRE RPLL+ALDVRP RL KLG V+GK LR ML  EK+
Sbjct:    1 MTTSSIKINFQGTSRDVNVPVPVTLASLQAAIAGAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELNLAVRLCPGSLEISAAGKENKPANKPDPEARLYKIAARNLREYNGVPSMTPLKLVKTLAFLELNPQRLVKQGLAPKVLLARMKAEAANNAKVSKV-PLG-DGKNNEDLAESVAA-GMELMSVEDDKKEWNDGFVSVE-----PADTSSPG--------NDNEEKNDAVAP-EVKKNLIHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVNGKDLRAMLQAEKK 286          
BLAST of mRNA_L-elsbetiae_contig18644.5452.1 vs. uniprot
Match: D8LN66_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN66_ECTSI)

HSP 1 Score: 342 bits (877), Expect = 6.680e-111
Identity = 204/303 (67.33%), Postives = 230/303 (75.91%), Query Frame = 1
Query:   61 MTTRTIKINFQGASRDVDLPSPFTLAGLQQAIASTFGTELPARSGADEAAKDGDLSFTYKDPEGDDIVFDKDSELHLALRLCPSSLEIAAALKETPAKK-PDPERRLYQLAARNLREYNGVPSMTPAKLIKTLAFLKLNPRRLVKQGLAPKVLLARMAADAKKNTGPAQTQPLGGDQSGNEDLAESVAAAGVGLMSVEDDKKEWNDGFVSVESDSAAPATEESGGADHTAAAAKDGKHGTAAAAPAEKKKDALHEAFIAGGIQLRPREARPLLLALDVRPLRLVKLGYVDGKYLRRMLNNEKQ 966
            MTT +IKINFQGASRDV++P+P TLA LQ  IA+ F  ELP RS   EAAKD DLSFTYKDP+GDDIVFDKDSEL LA+RLCP SLEI+AA KE  A + PD E RLY++AARNLREYNGVPSMTP KL+KTLAFLKLNP+RLVKQGLAPK LL RM A+A  N   ++  PLG D   NEDLAESVAA G+ LMS+EDDKKEWNDGFVSVE     PA         T++   D +    A AP E KK+ +H+AFIAGGIQLRPRE RPLL+ALDVRP RL KLG VDGK LR ML  EK+
Sbjct:   17 MTTSSIKINFQGASRDVNVPAPVTLASLQAVIAAAFDAELPVRSPGGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAMRLCPGSLEISAAGKEKKAAEMPDSEARLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKNLLPRMKAEAANNAKVSKV-PLG-DGKNNEDLAESVAA-GMELMSLEDDKKEWNDGFVSVE-----PAD--------TSSPDNDNEEKNDAVAP-EVKKNLIHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDLRAMLQAEKK 302          
BLAST of mRNA_L-elsbetiae_contig18644.5452.1 vs. uniprot
Match: A0A6H5KAY7_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAY7_9PHAE)

HSP 1 Score: 335 bits (860), Expect = 2.750e-108
Identity = 201/303 (66.34%), Postives = 228/303 (75.25%), Query Frame = 1
Query:   61 MTTRTIKINFQGASRDVDLPSPFTLAGLQQAIASTFGTELPARSGADEAAKDGDLSFTYKDPEGDDIVFDKDSELHLALRLCPSSLEIAAALKETPAKK-PDPERRLYQLAARNLREYNGVPSMTPAKLIKTLAFLKLNPRRLVKQGLAPKVLLARMAADAKKNTGPAQTQPLGGDQSGNEDLAESVAAAGVGLMSVEDDKKEWNDGFVSVESDSAAPATEESGGADHTAAAAKDGKHGTAAAAPAEKKKDALHEAFIAGGIQLRPREARPLLLALDVRPLRLVKLGYVDGKYLRRMLNNEKQ 966
            MTT +IKINFQGASRDV +P+P TLA LQ AIA+ F  ELP RS   EAAKD DLSFTYKDP+GDDIVFDKDSEL+LALRLCP SLEI+AA KE  A K PD E  LY++AARNLREYNGVPSMTP KL+KTLAFLKLNP+RLVKQGLAPK+LLARM A+   N   ++ +   GD   NEDLAE VAA G+  MSVEDDKKEWNDGFVSVE     PA         T+++    +     AAP E K++ +H+AFIAGGIQLRPRE RPLL+ALDVRP RL KLG VDGK LR ML  EK+
Sbjct:   28 MTTSSIKINFQGASRDVSVPAPATLARLQAAIAAVFEVELPVRSLTGEAAKDTDLSFTYKDPDGDDIVFDKDSELNLALRLCPGSLEISAAGKENKATKMPDSEETLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKMLLARMKAETANNAKLSKVRL--GDGKNNEDLAEWVAA-GMEFMSVEDDKKEWNDGFVSVE-----PA--------ETSSSDNGNEEENDDAAP-EVKQNLIHKAFIAGGIQLRPREVRPLLVALDVRPWRLAKLGLVDGKDLRAMLQAEKK 313          
BLAST of mRNA_L-elsbetiae_contig18644.5452.1 vs. uniprot
Match: A0A6H5KB69_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB69_9PHAE)

HSP 1 Score: 337 bits (863), Expect = 1.890e-107
Identity = 201/301 (66.78%), Postives = 229/301 (76.08%), Query Frame = 1
Query:   61 MTTRTIKINFQGASRDVDLPSPFTLAGLQQAIASTFGTELPARSGADEAAKDGDLSFTYKDPEGDDIVFDKDSELHLALRLCPSSLEIAAALKET-PAKKPDPERRLYQLAARNLREYNGVPSMTPAKLIKTLAFLKLNPRRLVKQGLAPKVLLARMAADAKKNTGPAQTQPLGGDQSGNEDLAESVAAAGVGLMSVEDDKKEWNDGFVSVESDSAAPATEESGGADHTAAAAKDGKHGTAAAAPAEKKKDALHEAFIAGGIQLRPREARPLLLALDVRPLRLVKLGYVDGKYLRRMLNNE 960
            MTT +IKINFQG SR+V++ +PFTLA LQ  IA+ F  ELP RS A EA KD DLSFTYKDP+GDDIVFDKDSEL+LA+RLCP SLEI+AA KE  P  KPDPE RLY++AARNLREYNGVPSMT  KLIKTLAFLKLNPRRLVKQGLAPK LLARM A+A  N   ++     GD   NEDLAESVAA G+ LMSVEDDKKE N+GFVS + D++A A   +     T++   D +     AAP E KK+ +H AFIAGGIQLRPRE RPLL+ALDVRP RL KLG V+GKYLR ML  E
Sbjct:    1 MTTSSIKINFQGTSRNVNVQAPFTLASLQATIAAAFDAELPVRSPAGEATKDTDLSFTYKDPDGDDIVFDKDSELNLAVRLCPDSLEISAAGKENKPDNKPDPEGRLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPRRLVKQGLAPKNLLARMKAEAANNMKVSKVTL--GDGENNEDLAESVAA-GMELMSVEDDKKECNNGFVSAKPDASAAAVPITA---KTSSPDNDNEEENDDAAP-EVKKNLIHTAFIAGGIQLRPREVRPLLVALDVRPWRLAKLGLVNGKYLRAMLQAE 294          
BLAST of mRNA_L-elsbetiae_contig18644.5452.1 vs. uniprot
Match: A0A6H5JPU3_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPU3_9PHAE)

HSP 1 Score: 330 bits (846), Expect = 3.750e-106
Identity = 201/304 (66.12%), Postives = 227/304 (74.67%), Query Frame = 1
Query:   61 MTTRTIKINFQGASRDVDLPSPFTLAGLQQAIASTFGTELPARSGADEAAKDGDLSFTYKDPEGDDIVFDKDSELHLALRLCPSSLEIAAALKETPAKK-PDPERRLYQLAARNLREYNGVPSMTPAKLIKTLAFLKLNPRRLVKQGLAPKVLLARMAADAKKNTGPAQTQPLGGDQSGNEDLAESVAAAGVGLMSVEDDKKEWNDGFVSVE-SDSAAPATEESGGADHTAAAAKDGKHGTAAAAPAEKKKDALHEAFIAGGIQLRPREARPLLLALDVRPLRLVKLGYVDGKYLRRMLNNEKQ 966
            MTT +IKI FQGASRDV++  P  LA LQ AIA+ F  ELPARS A EAA D DLSFTYKDP+GDDIVFDK+SEL LALRLCP SLEI+AA KE  A + PD E +LY++AARNLREYNGVPSMTP KL+KTLAFLKLNP+RLVKQGLAPKVLLARM A+A  N   ++  PLG D   NEDLAESVAA G+ LMSVED KKEWNDGFVSVE ++ + PA +     D               AAP E KK+ +H+AFIAGGIQLRPRE RPLL+ALDV P RL KLG V GK LR ML  EK+
Sbjct:   19 MTTSSIKITFQGASRDVNVRVPVMLASLQAAIAAAFDVELPARSSAGEAANDTDLSFTYKDPDGDDIVFDKESELQLALRLCPGSLEISAAGKENKATRMPDSEEKLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKV-PLG-DGKNNEDLAESVAA-GMELMSVEDGKKEWNDGFVSVEPAEISFPANDNEEKND---------------AAP-EAKKNLIHKAFIAGGIQLRPREVRPLLVALDVLPYRLAKLGLVGGKDLRAMLRAEKK 303          
BLAST of mRNA_L-elsbetiae_contig18644.5452.1 vs. uniprot
Match: D8LN82_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN82_ECTSI)

HSP 1 Score: 318 bits (815), Expect = 3.020e-103
Identity = 194/281 (69.04%), Postives = 219/281 (77.94%), Query Frame = 1
Query:   61 MTTRTIKINFQGASRDVDLPSPFTLAGLQQAIASTFGTELPARSGADEAAKDGDLSFTYKDPEGDDIVFDKDSELHLALRLCPSSLEIAAALKET-PAKKPDPERRLYQLAARNLREYNGVPSMTPAKLIKTLAFLKLNPRRLVKQGLAPKVLLARMAADAKKNTGPAQTQPLGGDQSGNEDLAESVAAAGVGLMSVEDDKKEWNDGFVSVESDS---AAPATEESGGADHTAAAAKDGKHGTAAAAPAEKKKDALHEAFIAGGIQLRPREARPLLLALDV 891
            MTT +IKINFQGASRDV++P+P TL  LQ AIA+ F  ELP RS A EAAKD DLSFTYKDP+GDDIVFDKDSEL LA+RLCPSSLEI+AALKE+ PA KPDPE RLY++AARNLREYNGVPSMTP KLIKTLAFLKLNP+RLVKQGLAPKVLLARM A+A  N   ++  PLG D   NEDLA+SVAA G+ LMSVED KKEWNDGFVS ESD+   AAP T E+   D+      D       AAP E KK+ +H+AFIAGGIQLRPRE   LLL + +
Sbjct:   16 MTTSSIKINFQGASRDVNVPAPVTLDSLQAAIAAAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISAALKESKPANKPDPEARLYKIAARNLREYNGVPSMTPPKLIKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKV-PLG-DGKNNEDLADSVAA-GMELMSVED-KKEWNDGFVSAESDAPAAAAPITAETSSPDNDKEEENDD------AAP-EVKKNLIHKAFIAGGIQLRPREG--LLLGVSI 283          
BLAST of mRNA_L-elsbetiae_contig18644.5452.1 vs. uniprot
Match: A0A6H5JCG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG1_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 4.260e-10
Identity = 59/177 (33.33%), Postives = 83/177 (46.89%), Query Frame = 1
Query:  361 DPERRLYQLAARNLREYNGVPSMTPAKLIKTLAFLKLNPRRLVKQGLAPKVLL-----ARMAADAKKNTGPAQTQPLGGDQSGNEDLAESVAAAGVGLMSVEDDKKEWNDGFVSVESDSAAPATEESGGADHTAAAAKDGKHGTAAAAPAEKKKDALHEAFIAGGIQLRPREARPLL 876
            +P   +++ AARNLREY+GVPS+TP  L  T+  L+L P RLV QGLAPK+LL     A + AD+   +G  + +    +   + DL+ + +  G             ND  V          T+ S G +                  A   K  +   F+A G+QLRPRE RPLL
Sbjct:   36 EPNPLMFKAAARNLREYHGVPSITPGGLETTMVLLELRPARLVAQGLAPKILLKGNSTAGVDADSTDGSGGFEAEEEQANNQFSHDLSSNSSDGG----------DTGNDNIV----------TQNSIGFE------------------ARASKHPIQAVFVAVGVQLRPRETRPLL 174          
BLAST of mRNA_L-elsbetiae_contig18644.5452.1 vs. uniprot
Match: A0A6H5K3J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3J2_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 4.550e-9
Identity = 62/174 (35.63%), Postives = 81/174 (46.55%), Query Frame = 1
Query:  361 DPERRLYQLAARNLREYNGVPSMTPAKLIKTLAFLKLNPRRLVKQGLAPKVLLARMAADAKKNTGPAQTQPLGGDQSGNEDLAESVAAAGVGLMSVEDDKKEWNDGFVSVESDSAAPATEESGGAD--HTAAAAKDGKHGTAAAAPAEKKKDALHEAFIAGGIQLRPREARPLL 876
            +P   LY+ AARNL EY+GVPSMT   L KT+  L+L P RLV QGLAPK LL   +A                  +G+                 E D ++ ++  VS +S+     T    G D  H   A +D       A+     K  +H  F+A G+QLRPRE RPLL
Sbjct:   46 EPNPLLYKAAARNLCEYHGVPSMTAGGLEKTMVLLQLRPGRLVAQGLAPKQLLEGKSA------------------AGDAXXXXXXXXXXXXXXXXEVDPEQADNNQVSDDSN-----TNSRDGTDIEHDHVATQDSIDIETGAS-----KHPIHAVFVAAGVQLRPRETRPLL 191          
BLAST of mRNA_L-elsbetiae_contig18644.5452.1 vs. uniprot
Match: A0A6H5KI70_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI70_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 1.890e-7
Identity = 31/47 (65.96%), Postives = 36/47 (76.60%), Query Frame = 1
Query:  376 LYQLAARNLREYNGVPSMTPAKLIKTLAFLKLNPRRLVKQGLAPKVL 516
            LY+ AARNLREY+GVPSMT   L KT+  L+L P RLV QGLAPK +
Sbjct:   53 LYKAAARNLREYHGVPSMTAGGLEKTMVLLQLRPGRLVAQGLAPKXI 99          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18644.5452.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5JQ17_9PHAE1.320e-11870.63PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LN68_ECTSI1.020e-11469.31PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LN66_ECTSI6.680e-11167.33PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KAY7_9PHAE2.750e-10866.34PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KB69_9PHAE1.890e-10766.78PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JPU3_9PHAE3.750e-10666.12PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LN82_ECTSI3.020e-10369.04PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JCG1_9PHAE4.260e-1033.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3J2_9PHAE4.550e-935.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KI70_9PHAE1.890e-765.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig18644contigL-elsbetiae_contig18644:255..2374 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size1305
Cds size1305
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815776.8621912-CDS-L-elsbetiae_contig18644:254..5991622815776.8621912-CDS-L-elsbetiae_contig18644:254..599Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18644 255..599 +
1691683095.2290745-CDS-L-elsbetiae_contig18644:254..5991691683095.2290745-CDS-L-elsbetiae_contig18644:254..599Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18644 255..599 +
1622815776.8726277-CDS-L-elsbetiae_contig18644:1414..23741622815776.8726277-CDS-L-elsbetiae_contig18644:1414..2374Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18644 1415..2374 +
1691683095.2394202-CDS-L-elsbetiae_contig18644:1414..23741691683095.2394202-CDS-L-elsbetiae_contig18644:1414..2374Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18644 1415..2374 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig18644.5452.1prot_L-elsbetiae_contig18644.5452.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig18644 255..2374 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig18644.5452.1

>prot_L-elsbetiae_contig18644.5452.1 ID=prot_L-elsbetiae_contig18644.5452.1|Name=mRNA_L-elsbetiae_contig18644.5452.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=435bp
MNTTNSNTTHNNNNTNNNTKMTTRTIKINFQGASRDVDLPSPFTLAGLQQ
AIASTFGTELPARSGADEAAKDGDLSFTYKDPEGDDIVFDKDSELHLALR
LCPSSLEIAAALKETPAKKPDPERRLYQLAARNLREYNGVPSMTPAKLIK
TLAFLKLNPRRLVKQGLAPKVLLARMAADAKKNTGPAQTQPLGGDQSGNE
DLAESVAAAGVGLMSVEDDKKEWNDGFVSVESDSAAPATEESGGADHTAA
AAKDGKHGTAAAAPAEKKKDALHEAFIAGGIQLRPREARPLLLALDVRPL
RLVKLGYVDGKYLRRMLNNEKQRRGNGSGHGNGHHQRMARGCGAGGGASG
GKPYGQMMMRRQPHPVARPPPPPPAYMEEAEDGMSFVPANARAACGGGRR
GPPHGSPHGPPHGPPHGPPHGPPHGPPHGPPHGPP
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mRNA from alignment at L-elsbetiae_contig18644:255..2374+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig18644.5452.1 ID=mRNA_L-elsbetiae_contig18644.5452.1|Name=mRNA_L-elsbetiae_contig18644.5452.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2120bp|location=Sequence derived from alignment at L-elsbetiae_contig18644:255..2374+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAACACCACTAACAGCAATACCACGCACAACAACAACAACACGAACAA CAACACCAAGATGACCACCCGCACGATCAAGATCAACTTCCAGGGCGCCT CTCGCGACGTGGACCTTCCTTCCCCATTCACGCTCGCCGGCCTGCAACAG GCCATCGCTTCCACCTTCGGCACCGAGCTGCCTGCCCGCTCCGGCGCTGA TGAGGCCGCCAAGGACGGCGACCTGTCCTTCACCTACAAGGACCCTGAGG GAGACGACATCGTGTTCGACAAGGACTCCGAGCTGCACCTTGCGCTTCGT CTGTGCCCCAGCTCTCTCGAGATCGCCGCGGCCCTCAAGGAAACGGTGAG AGCCTGGACAGAGAGAGCGTGCCCACCTTGCAGTTTAGGTCTTCCCAGTT GTTCCGTCGTGAGCGTGGTAATCACTTGTGTACTGTAGGTTAGATAGCTG AGAAGGACAATAAGGATGTATGGTGTCCCGAAGCTGTATCCGATGCGCCT GCGCAATCTTGTTCCATCATATTGTACACTTGACACGATTCGGCGACACT CGTCTCTCGTTTTCAACTCAGCTCTTCAACTCGACCCAAACAACAGACCC TGGATTCTCCTGTCATGAGCGCGGTATTACTGAAGTGTGTGCAGATTTTT TTTAGGCACAATACAGTGATTGCATAGCCATTCGTTGCAGGTGTCTGGAG GCCTGTATCCGATGCACCCGTAGTCTACATAGTTAGATCGTGCTGTAATT TTACAATTAACCCGACTTCGGCGACACTCGTTTTTCCGACTCGACCTTTG TTTGAGACCTTCCTCAGAAAGAGAAGTCAGTAGAGAGATAGATACGTCTG CGCTTCGAATATATGTAGATACACTACATAGTTTGCCCAGTTGGTACATA AGACTTATCTCTAATCTCTCATCCTCGTCCCACCAAACTGATGCTGCGCA GCCCAACACAGCCGCAGGCCGTGTTTGGTTCCCAACCTCGGTAATTCTCT TCTCGGCACTCAACACACGTATGTAGTCTACGACGATGTGAATATGCGAG GCGCTTTACTCAGTACTGCGGAGTCAATAGCAATGGGATACACGCTGTTT TACGTCTCCAACCCTCCCCCCCCTTTCCTCCCTTGCCCCTCTCTCTCCAA TCCCCTCCAGCCCGCCAAGAAGCCCGACCCCGAGCGCAGGCTGTACCAGC TCGCCGCCCGCAACCTCCGCGAGTACAACGGGGTGCCCTCGATGACACCG GCGAAGCTCATCAAGACCCTGGCGTTCCTCAAGCTCAACCCGCGCCGCCT CGTGAAGCAGGGCCTGGCCCCCAAAGTGCTGCTGGCTCGCATGGCCGCCG ACGCCAAGAAGAACACGGGCCCGGCGCAGACCCAGCCCCTCGGGGGCGAC CAGAGCGGCAACGAGGATCTGGCCGAGTCGGTCGCCGCCGCCGGCGTGGG GCTGATGAGCGTCGAGGACGACAAGAAGGAGTGGAATGACGGGTTCGTGT CCGTCGAATCCGACTCTGCCGCTCCTGCTACGGAAGAGTCCGGTGGCGCC GACCACACTGCTGCTGCCGCCAAGGACGGCAAGCACGGCACGGCAGCGGC CGCGCCTGCCGAGAAGAAGAAAGACGCCCTCCACGAGGCCTTCATCGCCG GCGGCATCCAGCTCCGCCCTCGCGAAGCGCGTCCCCTGCTTCTGGCCCTG GACGTCCGCCCCCTCCGCCTGGTGAAGCTCGGTTACGTCGACGGCAAGTA CCTCCGCCGCATGCTGAACAACGAGAAGCAGCGCCGCGGCAACGGCAGCG GCCACGGCAACGGCCACCACCAGCGCATGGCTCGGGGCTGTGGCGCTGGC GGCGGCGCGTCGGGCGGCAAGCCCTACGGACAGATGATGATGCGCCGCCA GCCCCACCCGGTCGCCCGCCCGCCCCCTCCCCCACCGGCGTACATGGAGG AGGCGGAGGACGGCATGTCCTTCGTCCCCGCCAACGCACGCGCGGCTTGC GGCGGTGGACGCCGCGGTCCTCCCCACGGCTCTCCGCACGGCCCTCCGCA CGGCCCTCCCCACGGCCCTCCCCACGGTCCTCCCCACGGTCCTCCCCACG GTCCTCCCCACGGACCTCCG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig18644:255..2374+

>mRNA_L-elsbetiae_contig18644.5452.1 ID=mRNA_L-elsbetiae_contig18644.5452.1|Name=mRNA_L-elsbetiae_contig18644.5452.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2610bp|location=Sequence derived from alignment at L-elsbetiae_contig18644:255..2374+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAACACCACTAACAGCAATACCACGCACAACAACAACAACACGAACAA
CAACACCAAGATGACCACCCGCACGATCAAGATCAACTTCCAGGGCGCCT
CTCGCGACGTGGACCTTCCTTCCCCATTCACGCTCGCCGGCCTGCAACAG
GCCATCGCTTCCACCTTCGGCACCGAGCTGCCTGCCCGCTCCGGCGCTGA
TGAGGCCGCCAAGGACGGCGACCTGTCCTTCACCTACAAGGACCCTGAGG
GAGACGACATCGTGTTCGACAAGGACTCCGAGCTGCACCTTGCGCTTCGT
CTGTGCCCCAGCTCTCTCGAGATCGCCGCGGCCCTCAAGGAAACGATGAA
CACCACTAACAGCAATACCACGCACAACAACAACAACACGAACAACAACA
CCAAGATGACCACCCGCACGATCAAGATCAACTTCCAGGGCGCCTCTCGC
GACGTGGACCTTCCTTCCCCATTCACGCTCGCCGGCCTGCAACAGGCCAT
CGCTTCCACCTTCGGCACCGAGCTGCCTGCCCGCTCCGGCGCTGATGAGG
CCGCCAAGGACGGCGACCTGTCCTTCACCTACAAGGACCCTGAGGGAGAC
GACATCGTGTTCGACAAGGACTCCGAGCTGCACCTTGCGCTTCGTCTGTG
CCCCAGCTCTCTCGAGATCGCCGCGGCCCTCAAGGAAACGCCCGCCAAGA
AGCCCGACCCCGAGCGCAGGCTGTACCAGCTCGCCGCCCGCAACCTCCGC
GAGTACAACGGGGTGCCCTCGATGACACCGGCGAAGCTCATCAAGACCCT
GGCGTTCCTCAAGCTCAACCCGCGCCGCCTCGTGAAGCAGGGCCTGGCCC
CCAAAGTGCTGCTGGCTCGCATGGCCGCCGACGCCAAGAAGAACACGGGC
CCGGCGCAGACCCAGCCCCTCGGGGGCGACCAGAGCGGCAACGAGGATCT
GGCCGAGTCGGTCGCCGCCGCCGGCGTGGGGCTGATGAGCGTCGAGGACG
ACAAGAAGGAGTGGAATGACGGGTTCGTGTCCGTCGAATCCGACTCTGCC
GCTCCTGCTACGGAAGAGTCCGGTGGCGCCGACCACACTGCTGCTGCCGC
CAAGGACGGCAAGCACGGCACGGCAGCGGCCGCGCCTGCCGAGAAGAAGA
AAGACGCCCTCCACGAGGCCTTCATCGCCGGCGGCATCCAGCTCCGCCCT
CGCGAAGCGCGTCCCCTGCTTCTGGCCCTGGACGTCCGCCCCCTCCGCCT
GGTGAAGCTCGGTTACGTCGACGGCAAGTACCTCCGCCGCATGCTGAACA
ACGAGAAGCAGCGCCGCGGCAACGGCAGCGGCCACGGCAACGGCCACCAC
CAGCGCATGGCTCGGGGCTGTGGCGCTGGCGGCGGCGCGTCGGGCGGCAA
GCCCTACGGACAGATGATGATGCGCCGCCAGCCCCACCCGGTCGCCCGCC
CGCCCCCTCCCCCACCGGCGTACATGGAGGAGGCGGAGGACGGCATGTCC
TTCGTCCCCGCCAACGCACGCGCGGCTTGCGGCGGTGGACGCCGCGGTCC
TCCCCACGGCTCTCCGCACGGCCCTCCGCACGGCCCTCCCCACGGCCCTC
CCCACGGTCCTCCCCACGGTCCTCCCCACGGTCCTCCCCACGGACCTCCG
CCCGCCAAGAAGCCCGACCCCGAGCGCAGGCTGTACCAGCTCGCCGCCCG
CAACCTCCGCGAGTACAACGGGGTGCCCTCGATGACACCGGCGAAGCTCA
TCAAGACCCTGGCGTTCCTCAAGCTCAACCCGCGCCGCCTCGTGAAGCAG
GGCCTGGCCCCCAAAGTGCTGCTGGCTCGCATGGCCGCCGACGCCAAGAA
GAACACGGGCCCGGCGCAGACCCAGCCCCTCGGGGGCGACCAGAGCGGCA
ACGAGGATCTGGCCGAGTCGGTCGCCGCCGCCGGCGTGGGGCTGATGAGC
GTCGAGGACGACAAGAAGGAGTGGAATGACGGGTTCGTGTCCGTCGAATC
CGACTCTGCCGCTCCTGCTACGGAAGAGTCCGGTGGCGCCGACCACACTG
CTGCTGCCGCCAAGGACGGCAAGCACGGCACGGCAGCGGCCGCGCCTGCC
GAGAAGAAGAAAGACGCCCTCCACGAGGCCTTCATCGCCGGCGGCATCCA
GCTCCGCCCTCGCGAAGCGCGTCCCCTGCTTCTGGCCCTGGACGTCCGCC
CCCTCCGCCTGGTGAAGCTCGGTTACGTCGACGGCAAGTACCTCCGCCGC
ATGCTGAACAACGAGAAGCAGCGCCGCGGCAACGGCAGCGGCCACGGCAA
CGGCCACCACCAGCGCATGGCTCGGGGCTGTGGCGCTGGCGGCGGCGCGT
CGGGCGGCAAGCCCTACGGACAGATGATGATGCGCCGCCAGCCCCACCCG
GTCGCCCGCCCGCCCCCTCCCCCACCGGCGTACATGGAGGAGGCGGAGGA
CGGCATGTCCTTCGTCCCCGCCAACGCACGCGCGGCTTGCGGCGGTGGAC
GCCGCGGTCCTCCCCACGGCTCTCCGCACGGCCCTCCGCACGGCCCTCCC
CACGGCCCTCCCCACGGTCCTCCCCACGGTCCTCCCCACGGTCCTCCCCA
CGGACCTCCG
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