Homology
BLAST of mRNA_L-elsbetiae_contig18639.5450.1 vs. uniprot
Match:
D7G2I1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2I1_ECTSI)
HSP 1 Score: 219 bits (559), Expect = 9.910e-67
Identity = 111/149 (74.50%), Postives = 126/149 (84.56%), Query Frame = 1
Query: 7 PQFVLLGVCNNSDGIIRAIELDPREDFLLNPSPGYSVVNLRYAPLRVFAYIKTADDAGLHLEGLDRGVIAVAPVEKDFTIEGVGKREFTFRRRQLPLVAGCVSSVFRSQGQTMRNIILDIRPPPGKGMDSAAVYVALSRATSLEALSLL 453
PQFVLLGVCNNSDGIIR IELDPRE + + + GYSVV LRYAPLR+F YIK+AD AGLHL+GL RGVIAVAPVE+ FTI G+ KR+FTF+RRQ+PL AGC+SSV+RSQGQTM IILDIR PPG +D AAVYVALSRAT L L+LL
Sbjct: 143 PQFVLLGVCNNSDGIIRGIELDPREGYA-SSTAGYSVVTLRYAPLRIFVYIKSADAAGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTMPKIILDIRRPPGHAVDCAAVYVALSRATGLGDLNLL 290
BLAST of mRNA_L-elsbetiae_contig18639.5450.1 vs. uniprot
Match:
A0A6H5KXW4_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXW4_9PHAE)
HSP 1 Score: 224 bits (571), Expect = 6.200e-66
Identity = 114/157 (72.61%), Postives = 128/157 (81.53%), Query Frame = 1
Query: 4 KPQFVLLGVCNNSDGIIRAIELDPREDFLLNPSPGYSVVNLRYAPLRVFAYIKTADDAGLHLEGLDRGVIAVAPVEKDFTIEGVGKREFTFRRRQLPLVAGCVSSVFRSQGQTMRNIILDIRPPPGKGMD--SAAVYVALSRATSLEALSL-LPRDF 465
+PQFVLLGVCNNSDGIIR IELDP EDFLL+P+PGYSVVNLRYAPL+VF YIKTADDAGLHLEGLDRGV+A+APVEK+ TIEG+GK +F F+RRQLPL AGCVSSVFRSQGQTM IILDI PPPG M S + ++ + L SL LP F
Sbjct: 621 RPQFVLLGVCNNSDGIIRGIELDPLEDFLLDPTPGYSVVNLRYAPLQVFVYIKTADDAGLHLEGLDRGVVAIAPVEKECTIEGIGKGKFIFKRRQLPLPAGCVSSVFRSQGQTMPKIILDIHPPPGTAMKGGSTSTFICFRFVSRLPRASLALPYAF 777
BLAST of mRNA_L-elsbetiae_contig18639.5450.1 vs. uniprot
Match:
D7G3U9_ECTSI (ATP-dependent DNA helicase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U9_ECTSI)
HSP 1 Score: 219 bits (559), Expect = 5.410e-63
Identity = 111/149 (74.50%), Postives = 126/149 (84.56%), Query Frame = 1
Query: 7 PQFVLLGVCNNSDGIIRAIELDPREDFLLNPSPGYSVVNLRYAPLRVFAYIKTADDAGLHLEGLDRGVIAVAPVEKDFTIEGVGKREFTFRRRQLPLVAGCVSSVFRSQGQTMRNIILDIRPPPGKGMDSAAVYVALSRATSLEALSLL 453
PQFVLLGVCNNSDGIIR IELDPRE + + + GYSVV LRYAPLR+F YIK+AD AGLHL+GL RGVIAVAPVE+ FTI G+ KR+FTF+RRQ+PL AGC+SSV+RSQGQTM IILDIR PPG +D AAVYVALSRAT L L+LL
Sbjct: 1850 PQFVLLGVCNNSDGIIRGIELDPREGYA-SSTAGYSVVTLRYAPLRIFVYIKSADAAGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTMPKIILDIRRPPGHAVDCAAVYVALSRATGLGDLNLL 1997
BLAST of mRNA_L-elsbetiae_contig18639.5450.1 vs. uniprot
Match:
A0A6H5KIB1_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIB1_9PHAE)
HSP 1 Score: 190 bits (482), Expect = 1.230e-52
Identity = 89/115 (77.39%), Postives = 104/115 (90.43%), Query Frame = 1
Query: 4 KPQFVLLGVCNNSDGIIRAIELDPREDFLLNPSPGYSVVNLRYAPLRVFAYIKTADDAGLHLEGLDRGVIAVAPVEKDFTIEGVGKREFTFRRRQLPLVAGCVSSVFRSQGQTMR 348
KPQFVLLGVCNNSDGIIR IELDPREDFLL+P+PGYSVVNLRYAPLRVF YIKTADDAGLHLEGLDRGV+A+APVEK+FTIEG+GKR+F F+RRQLP + G ++ + R +T++
Sbjct: 2087 KPQFVLLGVCNNSDGIIRGIELDPREDFLLDPTPGYSVVNLRYAPLRVFVYIKTADDAGLHLEGLDRGVVAIAPVEKEFTIEGIGKRKFIFKRRQLPDILGIINYLHRLGKETLK 2201
BLAST of mRNA_L-elsbetiae_contig18639.5450.1 vs. uniprot
Match:
A0A6H5K882_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K882_9PHAE)
HSP 1 Score: 147 bits (371), Expect = 1.010e-37
Identity = 77/149 (51.68%), Postives = 101/149 (67.79%), Query Frame = 1
Query: 7 PQFVLLGVCNNSDGIIRAIELDPREDFLLNPSPGYSVVNLRYAPLRVFAYIKTADDAGLHLEGLDRGVIAVAPVEKDFTIEGVGKREFTFRRRQLPLVAGCVSSVFRSQGQTMRNIILDIRPPPGKGMDSAAVYVALSRATSLEALSLL 453
PQ VLLGVC+N DGI+RAIELD RE + N GY VV+L++ P+RVF +I++ DD+GL L G RGV+A P+E++ + G R FT +RRQLPL +GC+SSV +ILD+R PPG +D A++YVA SRA SL LL
Sbjct: 1337 PQHVLLGVCSNRDGIVRAIELDQREQ-IQNHDGGYRVVHLKHLPVRVFVHIESMDDSGLKLPGFPRGVVAFGPIERNVVLTGKNGRNFTIKRRQLPLTSGCLSSV---------RVILDLRKPPGPRVDPASLYVARSRAKSLNDTYLL 1475
BLAST of mRNA_L-elsbetiae_contig18639.5450.1 vs. uniprot
Match:
A0A6H5L437_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L437_9PHAE)
HSP 1 Score: 132 bits (332), Expect = 2.580e-36
Identity = 65/106 (61.32%), Postives = 83/106 (78.30%), Query Frame = 1
Query: 7 PQFVLLGVCNNSDGIIRAIELDPREDFLLNPSPGYSVVNLRYAPLRVFAYIKTADDAGLHLEGLDRGVIAVAPVEKDFTIEGVGKREFTFRRRQLPLVAGCVSSVF 324
PQ VLLGVCNNSDGI+RAIEL RE + N + GY VV+L+Y P+RVF +I++ADDAGL L GL RGV+A PVE++F + G R+FT +RRQLPL +GC+SSV+
Sbjct: 46 PQHVLLGVCNNSDGIVRAIELYQREQ-VQNHNDGYRVVHLKYPPVRVFVHIESADDAGLKLPGLPRGVVAFGPVERNFVLTGNNGRKFTIKRRQLPLTSGCLSSVY 150
BLAST of mRNA_L-elsbetiae_contig18639.5450.1 vs. uniprot
Match:
A0A6H5JN07_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN07_9PHAE)
HSP 1 Score: 121 bits (304), Expect = 1.030e-28
Identity = 76/164 (46.34%), Postives = 98/164 (59.76%), Query Frame = 1
Query: 4 KPQFVLLGVCNNSDGIIRAIELDPREDFLLNPSPGYSVVNLRYAPLRVFAYIKTADDAGLHLEGLDRGVIAVAPVEKDFTIEGVG-KREFTFRRRQLPLVAGCVSSV-------------FRSQGQTMRNIILDIRPPPGKGMDSAAVYVALSRATSLEALSLL 453
+PQFV+LGVCNNSDGIIR IE+ RE+ VF YI+TA DAGL L L RGV +V PVE++F+I KR+FTF R+Q+PL AGC+S++ S ++R IILD++ PP +D A+ Y+ALSRAT LE L LL
Sbjct: 1733 QPQFVILGVCNNSDGIIRGIEITQREE--------------------VFVYIQTAYDAGLKLPDLCRGVTSVGPVERNFSIVITKTKRKFTFSRKQVPLTAGCLSALGSDYIASSCLYHPILSHCVSLRRIILDLQKPPQPLVDPASSYLALSRATYLEDLYLL 1876
BLAST of mRNA_L-elsbetiae_contig18639.5450.1 vs. uniprot
Match:
A0A6H5JCW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCW5_9PHAE)
HSP 1 Score: 112 bits (279), Expect = 2.790e-27
Identity = 58/102 (56.86%), Postives = 73/102 (71.57%), Query Frame = 1
Query: 7 PQFVLLGVCNNSDGIIRAIELDPREDFLLNPSPGYSVVNLRYAPLRVFAYIKTADDAGLHLEGLDRGVIAVAPVEKDFTIEGVGKREFTFRRRQLPLVAGCV 312
PQFVLLGVCNNSDG+I +IELD RE++ ++ +PG+SVV LRY P+R L+GL RGV+A APVEK F++ GVGKR+FT +RRQL AG V
Sbjct: 59 PQFVLLGVCNNSDGVIDSIELDQREEYHVHSNPGHSVVYLRYTPVR--------------LDGLPRGVVAFAPVEKPFSVVGVGKRKFTIQRRQLLPTAGSV 146
BLAST of mRNA_L-elsbetiae_contig18639.5450.1 vs. uniprot
Match:
A0A6H5JT57_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT57_9PHAE)
HSP 1 Score: 103 bits (258), Expect = 1.470e-22
Identity = 60/158 (37.97%), Postives = 90/158 (56.96%), Query Frame = 1
Query: 52 IRAIELDPREDFLLNPSPGYSVVNLRYAPLRVFAYIKTADDAGLHLEGLDRGVIAVAPVEKDFTIEGVGKREFTFRRRQLPLVAGCVSSVFRSQ----------------------------GQTMRNIILDIRPPPGKGMDSAAVYVALSRATSLEA 441
I +I+LDPRE + GY VV+L + P+RV +I+TA DAGLHL L+RG +AV + F + G+ ++++F+R QLPL+ G +SSV+R+Q G+T++ ++L + P MD +A YVALSRATS E+
Sbjct: 1037 IVSIDLDPREAIVDGEPEGYRVVHLVHPPVRVVIFIQTAYDAGLHLPSLNRGEVAVGVESRSFDVRGLHDKKYSFKRGQLPLLPGHLSSVYRAQHFIHAYMHTSVLPQLVSFCLSSCYLSSKGETIKTLLLHMTKPVDGVMDPSAAYVALSRATSFES 1194
BLAST of mRNA_L-elsbetiae_contig18639.5450.1 vs. uniprot
Match:
UPI001B86C5E2 (uncharacterized protein n=2 Tax=Suillus paluster TaxID=48578 RepID=UPI001B86C5E2)
HSP 1 Score: 95.5 bits (236), Expect = 1.070e-21
Identity = 67/162 (41.36%), Postives = 87/162 (53.70%), Query Frame = 1
Query: 22 LGVCNNSDGIIRAIELDPRE-DFLLNPSPGYSVVNLRYAPLRVFAYIKTADDAGLHLEGLDRGVIAVAPVEKDFTIEGVGKREFTFRRRQLPLVAGCVSSVFRSQGQTMRNIILDIRPPPGKGMDSAAVYVALSRATSLEALSLLPRDFGGPQPATKQRHPC 504
L + N S G I I LD RE DF SP ++V L Y P + IK + LEGL++ +I + P+E+ FT+ G + RRRQLPL + +RSQGQT+ N I+DI PP G+ VYVALSRA + + LL RDF T HPC
Sbjct: 13 LDIANGSRGEITKIVLDERETDF----SPTAAIVELTYPP--AYVLIKLNRTKAVQLEGLEKNIIPLVPMERTFTVIH-GNHPKSIRRRQLPLTPAYSFTDYRSQGQTINNAIIDIATPPTAGLTPFNVYVALSRARGRDGVRLL-RDFDENLLMT---HPC 163
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18639.5450.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 9.91e-67 / Id = 74.50 Expect = 6.20e-66 / Id = 72.61 Expect = 5.41e-63 / Id = 74.50 Expect = 1.23e-52 / Id = 77.39 Expect = 1.01e-37 / Id = 51.68 Expect = 2.58e-36 / Id = 61.32 Expect = 1.03e-28 / Id = 46.34 Expect = 2.79e-27 / Id = 56.86 Expect = 1.47e-22 / Id = 37.97 Expect = 1.07e-21 / Id = 41.36 Sequence D7G2I1_ECTSI A0A6H5KXW4_9PHAE D7G3U9_ECTSI A0A6H5KIB1_9PHAE A0A6H5K882_9PHAE A0A6H5L437_9PHAE A0A6H5JN07_9PHAE A0A6H5JCW5_9PHAE A0A6H5JT57_9PHAE UPI001B86C5E2
Pages
back to top
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig18639.5450.1
>prot_L-elsbetiae_contig18639.5450.1 ID=prot_L-elsbetiae_contig18639.5450.1|Name=mRNA_L-elsbetiae_contig18639.5450.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=177bp
MKPQFVLLGVCNNSDGIIRAIELDPREDFLLNPSPGYSVVNLRYAPLRVF AYIKTADDAGLHLEGLDRGVIAVAPVEKDFTIEGVGKREFTFRRRQLPLV AGCVSSVFRSQGQTMRNIILDIRPPPGKGMDSAAVYVALSRATSLEALSL LPRDFGGPQPATKQRHPCHHQVPPST* back to top mRNA from alignment at L-elsbetiae_contig18639:487..1017+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig18639.5450.1 ID=mRNA_L-elsbetiae_contig18639.5450.1|Name=mRNA_L-elsbetiae_contig18639.5450.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=531bp|location=Sequence derived from alignment at L-elsbetiae_contig18639:487..1017+ (Laminarionema elsbetiae ELsaHSoW15)ATGAAGCCCCAGTTTGTCCTCTTAGGCGTTTGCAACAATTCCGACGGCAT
CATCCGGGCCATCGAACTTGATCCCCGCGAGGACTTCCTCCTCAACCCTT
CGCCTGGTTACTCCGTCGTCAACCTGCGGTATGCGCCTCTTCGGGTCTTC
GCCTACATCAAGACCGCCGACGACGCTGGACTGCATTTAGAAGGCTTGGA
CCGTGGTGTAATCGCTGTCGCTCCCGTCGAAAAAGACTTCACCATCGAAG
GCGTCGGCAAGAGAGAATTTACCTTCAGAAGACGGCAGCTTCCGCTAGTC
GCTGGCTGCGTCTCCTCCGTCTTCCGAAGCCAGGGCCAAACCATGCGGAA
CATCATCCTCGACATTCGACCTCCTCCCGGCAAAGGCATGGACAGCGCAG
CCGTTTATGTTGCTTTATCTCGTGCCACGAGCCTAGAGGCCCTCAGTCTT
CTTCCCCGTGACTTTGGAGGACCTCAACCAGCCACCAAACAAAGACATCC
TTGCCATCATCAAGTACCTCCATCGACTTGA back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig18639:487..1017+
>mRNA_L-elsbetiae_contig18639.5450.1 ID=mRNA_L-elsbetiae_contig18639.5450.1|Name=mRNA_L-elsbetiae_contig18639.5450.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1062bp|location=Sequence derived from alignment at L-elsbetiae_contig18639:487..1017+ (Laminarionema elsbetiae ELsaHSoW15) ATGAAGCCCCAGTTTGTCCTCTTAGGCGTTTGCAACAATTCCGACGGCAT CATCCGGGCCATCGAACTTGATCCCCGCGAGGACTTCCTCCTCAACCCTT CGCCTGGTTACTCCGTCGTCAACCTGCGGTATGCGCCTCTTCGGGTCTTC GCCTACATCAAGACCGCCGACGACGCTGGACTGCATTTAGAAGGCTTGGA CCGTGGTGTAATCGCTGTCGCTCCCGTCGAAAAAGACTTCACCATCGAAG GCGTCGGCAAGAGAGAATTTACCTTCAGAAGACGGCAGCTTCCGCTAGTC GCTGGCTGCGTCTCCTCCGTCTTCCGAAGCCAGGGCCAAACCATGCGGAA CATCATCCTCGACATTCGACCTCCTCCCGGCAAAGGCATGGACAGCGCAG CCGTTTATGTTGCTTTATCTCGTGCCACGAGCCTAGAGGCCCTCAGTCTT CTTCCCCGTGACTTTGGAGGACCTCAACCAGCCACCAAACAAAGACATCC TTGCCATCATCAAGTACCTCCATCGACTTGAATGAAGCCCCAGTTTGTCC TCTTAGGCGTTTGCAACAATTCCGACGGCATCATCCGGGCCATCGAACTT GATCCCCGCGAGGACTTCCTCCTCAACCCTTCGCCTGGTTACTCCGTCGT CAACCTGCGGTATGCGCCTCTTCGGGTCTTCGCCTACATCAAGACCGCCG ACGACGCTGGACTGCATTTAGAAGGCTTGGACCGTGGTGTAATCGCTGTC GCTCCCGTCGAAAAAGACTTCACCATCGAAGGCGTCGGCAAGAGAGAATT TACCTTCAGAAGACGGCAGCTTCCGCTAGTCGCTGGCTGCGTCTCCTCCG TCTTCCGAAGCCAGGGCCAAACCATGCGGAACATCATCCTCGACATTCGA CCTCCTCCCGGCAAAGGCATGGACAGCGCAGCCGTTTATGTTGCTTTATC TCGTGCCACGAGCCTAGAGGCCCTCAGTCTTCTTCCCCGTGACTTTGGAG GACCTCAACCAGCCACCAAACAAAGACATCCTTGCCATCATCAAGTACCT CCATCGACTTGA back to top