mRNA_L-elsbetiae_contig18604.5440.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig18604.5440.1
Unique NamemRNA_L-elsbetiae_contig18604.5440.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig18604.5440.1 vs. uniprot
Match: ACT_FUCVE (Actin n=105 Tax=cellular organisms TaxID=131567 RepID=ACT_FUCVE)

HSP 1 Score: 653 bits (1684), Expect = 7.510e-235
Identity = 332/396 (83.84%), Postives = 347/396 (87.63%), Query Frame = 1 
Query:    1 AVEDLQALVVDNGSGFCKAGFAGDDAPRAVFPSIVGRPKHPRIMVGMDQKDAYVGDEAQSKRGVLTLKHPIKHGIVTNWDDMEKIWHHTFYSELRVNPEEHPVLLTEAPLTPKANKERMTQTMFDTFNVPAMHVNTQAVLSLYASGRTTGCVLDSGDGVSHVVPIYDGYALPNAINRLNFAGSVVTDNFMKLLTERGYSFKTFAER*IVLDIKEKLTYVALDFDQEMKTAAESSQLEKSYELPDGNVIVIGNERFRCPEVCGVLFQPSLIRLESPRFGDXXXXXXXXXXXXXXXXHDCIFKTIMKCDIDIRKDLYANIVLSGGTTMFSGIGERITKELNALAPSNMKIEVVASPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPSIVHRKCF 1188
            A ED+QALVVDNGSG CKAGFA DDAPRAVFPSIVGRPKHP IMVGMDQKDAYVGDEAQSKRGVLTLK+PI+HGIVTNWDDMEKIWHHTFY+ELRV PEEHPVLLTEAPL PKANKERMTQ MF+TFNVPAM+VN QAVLSLYASGRTTGCVLDSGDGVSH VPIY+GYALP+AINRL+ AG  +TDN MK+LTERGYSF T AER IV DIKEKLTYVALDFDQEMKTAAESSQLEKSYELPDGNVIVIGNERFRCPEV   LFQPS I +ES                     HDC FKTIMKCD+DIRKDLY NIVLSGGTTMF GIGER+TKEL ALAPS MKI+VVA PERKYSVWIGGSILASLSTFQQMWISKAEYDESGPSIVHRKCF
Sbjct:    2 ADEDVQALVVDNGSGMCKAGFARDDAPRAVFPSIVGRPKHPGIMVGMDQKDAYVGDEAQSKRGVLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANKERMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGCVLDSGDGVSHTVPIYEGYALPHAINRLDLAGRDLTDNLMKVLTERGYSFTTTAEREIVRDIKEKLTYVALDFDQEMKTAAESSQLEKSYELPDGNVIVIGNERFRCPEV---LFQPSFIGMESSGI------------------HDCTFKTIMKCDVDIRKDLYGNIVLSGGTTMFPGIGERMTKELTALAPSTMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPSIVHRKCF 376
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BLAST of mRNA_L-elsbetiae_contig18604.5440.1 vs. uniprot
Match: A0A2P4X4C2_9STRA (Actin-1 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X4C2_9STRA)

HSP 1 Score: 624 bits (1608), Expect = 1.560e-221
Identity = 314/396 (79.29%), Postives = 341/396 (86.11%), Query Frame = 1 
Query:    1 AVEDLQALVVDNGSGFCKAGFAGDDAPRAVFPSIVGRPKHPRIMVGMDQKDAYVGDEAQSKRGVLTLKHPIKHGIVTNWDDMEKIWHHTFYSELRVNPEEHPVLLTEAPLTPKANKERMTQTMFDTFNVPAMHVNTQAVLSLYASGRTTGCVLDSGDGVSHVVPIYDGYALPNAINRLNFAGSVVTDNFMKLLTERGYSFKTFAER*IVLDIKEKLTYVALDFDQEMKTAAESSQLEKSYELPDGNVIVIGNERFRCPEVCGVLFQPSLIRLESPRFGDXXXXXXXXXXXXXXXXHDCIFKTIMKCDIDIRKDLYANIVLSGGTTMFSGIGERITKELNALAPSNMKIEVVASPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPSIVHRKCF 1188
            A ED+QALVVDNGSG CKAGFAGDDAPRAVFPSIVGRPKH  IMVGMDQKD YVGDEAQSKRGVLTLK+PI+HGIVTNWDDMEKIWHHTFY+ELRV PE+HPVLLTEAPL PKAN+ERMTQ MF+TF+VPAM+VN QAVLSLYASGRTTGCVLDSGDGV+H VPIY+GYA+P+AI RLN AG  +TD  MK+LTERGYSF T AER IV DIKEKLTY+ALDFDQEMKTAAESS LEKSYELPDGNVIVIGNERFR PEV   L QP L+  E+                     H+C F+TIMKCD+DIRKDLY N+VLSGGTTM+ GIGER+TKEL ALAPS+MKI+VVA PERKYSVWIGGSIL+SLSTFQQMWISKAEYDESGPSIVHRKCF
Sbjct:  112 AEEDVQALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPKHMGIMVGMDQKDTYVGDEAQSKRGVLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEDHPVLLTEAPLNPKANRERMTQIMFETFSVPAMYVNIQAVLSLYASGRTTGCVLDSGDGVTHTVPIYEGYAIPSAIMRLNLAGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLTYIALDFDQEMKTAAESSGLEKSYELPDGNVIVIGNERFRTPEV---LLQPDLLGKEA------------------LGIHECTFQTIMKCDVDIRKDLYCNVVLSGGTTMYPGIGERLTKELTALAPSSMKIKVVAPPERKYSVWIGGSILSSLSTFQQMWISKAEYDESGPSIVHRKCF 486
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BLAST of mRNA_L-elsbetiae_contig18604.5440.1 vs. uniprot
Match: A0A0W8CH75_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8CH75_PHYNI)

HSP 1 Score: 617 bits (1591), Expect = 3.290e-220
Identity = 317/423 (74.94%), Postives = 341/423 (80.61%), Query Frame = 1 
Query:    1 AVEDLQALVVDNGSGFCKAGFAGDDAPRAVFPSIVGRPKHPRIMVGMDQKDAYVGDEAQSKRGVLTLKHPIKHGIVTNWDDMEKIWHHTFYSELRVNPEEHPVLLTEAPLTPKANKERMTQTMFDTFNVPAMHVNTQAVLSLYASGRTTGCVLDSGDGVSHVVPIYDGYALPNAINRLNFAGSVVTDNFMKLLTERGYSFKTFAER*IVLDIKEKLTYVALDFDQEMKTAAESSQLEKSYELPDGNVIVIGNERFRCPEVCGV---------------------------LFQPSLIRLESPRFGDXXXXXXXXXXXXXXXXHDCIFKTIMKCDIDIRKDLYANIVLSGGTTMFSGIGERITKELNALAPSNMKIEVVASPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPSIVHRKCF 1188
            A ED+QALVVDNGSG CKAGFAGDDAPRAVFPSIVGRPKH  IMVGMDQKDAYVGDEAQSKRGVLTLK+PI+HGIVTNWDDMEKIWHHTFY+ELRV PEEHPVLLTEAPL PKAN+ERMTQ MF+TFNVPAM+VN QAVLSLYASGRTTGCVLDSGDGVSH VPIY+GYA+P+AI RL+ AG  +TD  MK+LTERGYSF T AER IV DIKEKLTYVA+DFDQEM+TA ESS LEKSYELPDGNVIVIGNERFR    CGV                           LFQP LI  E+                     H+C F+TIMKCDIDIRKDLY NIVLSGGTTM+ GIGER+TKEL ALAPS MK++VVA PERKYSVWIGGSIL+SLSTFQQMWISKAEYDE+GPSIVHRKCF
Sbjct:    2 AEEDVQALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPKHMGIMVGMDQKDAYVGDEAQSKRGVLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRERMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGCVLDSGDGVSHTVPIYEGYAIPSAIKRLDLAGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLTYVAVDFDQEMRTAVESSGLEKSYELPDGNVIVIGNERFRDENCCGVIXXXXXXXXXXXXXXXXXXXXXXTPEVLFQPGLIGKEA------------------LGVHECTFQTIMKCDIDIRKDLYCNIVLSGGTTMYPGIGERLTKELTALAPSTMKVKVVAPPERKYSVWIGGSILSSLSTFQQMWISKAEYDEAGPSIVHRKCF 406
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BLAST of mRNA_L-elsbetiae_contig18604.5440.1 vs. uniprot
Match: A0A2R5GVQ0_9STRA (Actin n=17 Tax=Sar TaxID=2698737 RepID=A0A2R5GVQ0_9STRA)

HSP 1 Score: 607 bits (1566), Expect = 6.990e-217
Identity = 306/396 (77.27%), Postives = 336/396 (84.85%), Query Frame = 1 
Query:    1 AVEDLQALVVDNGSGFCKAGFAGDDAPRAVFPSIVGRPKHPRIMVGMDQKDAYVGDEAQSKRGVLTLKHPIKHGIVTNWDDMEKIWHHTFYSELRVNPEEHPVLLTEAPLTPKANKERMTQTMFDTFNVPAMHVNTQAVLSLYASGRTTGCVLDSGDGVSHVVPIYDGYALPNAINRLNFAGSVVTDNFMKLLTERGYSFKTFAER*IVLDIKEKLTYVALDFDQEMKTAAESSQLEKSYELPDGNVIVIGNERFRCPEVCGVLFQPSLIRLESPRFGDXXXXXXXXXXXXXXXXHDCIFKTIMKCDIDIRKDLYANIVLSGGTTMFSGIGERITKELNALAPSNMKIEVVASPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPSIVHRKCF 1188
            A +++QALVVDNGSG CKAGFAGDDAPRAVFPSIVGRPKHP IMVGMDQKDAYVGDEAQSKRGVLTLK+PI+HGIVTNWDDMEKIWHHTFY+ELRV PEEHPVLLTEAPL PKAN+ERMTQ MF+TFNVPAM+VN QAVLSLYASGRTTG VLDSGDGV+H VPIY+GYALP+A+ R++ AG  +TD  MK+LTERGYSF T AER IV DIKEKL YVA DFD+EM+ AAESS LEKSYELPDGNVI IGNERFRCPEV   LFQPS I  E+                     HD +F+TIMKCD+DIRKDLYANIV+SGG+TM+ G+  R+ KE+ ALAPS MKI+VVA PERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:    2 ADDEVQALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPKHPGIMVGMDQKDAYVGDEAQSKRGVLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRERMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGAVLDSGDGVTHTVPIYEGYALPHAVLRIDLAGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVAQDFDEEMRLAAESSALEKSYELPDGNVITIGNERFRCPEV---LFQPSFIGKEAQ------------------GVHDTMFQTIMKCDVDIRKDLYANIVMSGGSTMYEGLAARLEKEMVALAPSTMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
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BLAST of mRNA_L-elsbetiae_contig18604.5440.1 vs. uniprot
Match: A0A3R7IGD6_9STRA (Uncharacterized protein n=187 Tax=Sar TaxID=2698737 RepID=A0A3R7IGD6_9STRA)

HSP 1 Score: 627 bits (1617), Expect = 1.400e-216
Identity = 321/394 (81.47%), Postives = 341/394 (86.55%), Query Frame = 1 
Query:    1 AVEDLQALVVDNGSGFCKAGFAGDDAPRAVFPSIVGRPKHPRIMVGMDQKDAYVGDEAQSKRGVLTLKHPIKHGIVTNWDDMEKIWHHTFYSELRVNPEEHPVLLTEAPLTPKANKERMTQTMFDTFNVPAMHVNTQAVLSLYASGRTTGCVLDSGDGVSHVVPIYDGYALPNAINRLNFAGSVVTDNFMKLLTERGYSFKTFAER*IVLDIKEKLTYVALDFDQEMKTAAESSQLEKSYELPDGNVIVIGNERFRCPEVCGVLFQPSLIRLESPRFGDXXXXXXXXXXXXXXXXHDCIFKTIMKCDIDIRKDLYANIVLSGGTTMFSGIGERITKELNALAPSNMKIEVVASPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPSIVHRK 1182
            A ED+QALVVDNGSG CKAGFAGDDAPRAVFPSIVGRPKH  IMVGMDQKDAYVGDEAQSKRGVLTLK+PI+HGIVTNWDDMEKIWHHTFY+ELRV PEEHPVLLTEAPL PKAN+ERMTQ MF+TFNVPAM+VN QAVLSLYASGRTTGCVLDSGDGVSH VPIY+GYALP+AI RL+ AG  +TD  MK+LTERGYSF T AER IV DIKEKLTY+ALDFDQEMKTAAESS LEKSYELPDGNVIVIGNERFR PEV   LFQPSLI  E+                     HDC F+TIMKCD+DIRKDLY NIVLSGGTTM+ GIGER+TKEL ALAPS MKI+VVA PERKYSVWIGGSIL+SLSTFQQMWISKAEYDESGPSIVHRK
Sbjct:    2 ADEDVQALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPKHLGIMVGMDQKDAYVGDEAQSKRGVLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRERMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGCVLDSGDGVSHTVPIYEGYALPHAIVRLDLAGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLTYIALDFDQEMKTAAESSGLEKSYELPDGNVIVIGNERFRTPEV---LFQPSLIGKEASGI------------------HDCTFQTIMKCDVDIRKDLYCNIVLSGGTTMYPGIGERMTKELTALAPSTMKIKVVAPPERKYSVWIGGSILSSLSTFQQMWISKAEYDESGPSIVHRK 374
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BLAST of mRNA_L-elsbetiae_contig18604.5440.1 vs. uniprot
Match: A0A7J6MLX9_PERCH (Actin, aortic smooth muscle n=7 Tax=Alveolata TaxID=33630 RepID=A0A7J6MLX9_PERCH)

HSP 1 Score: 605 bits (1559), Expect = 8.130e-216
Identity = 301/396 (76.01%), Postives = 338/396 (85.35%), Query Frame = 1 
Query:    1 AVEDLQALVVDNGSGFCKAGFAGDDAPRAVFPSIVGRPKHPRIMVGMDQKDAYVGDEAQSKRGVLTLKHPIKHGIVTNWDDMEKIWHHTFYSELRVNPEEHPVLLTEAPLTPKANKERMTQTMFDTFNVPAMHVNTQAVLSLYASGRTTGCVLDSGDGVSHVVPIYDGYALPNAINRLNFAGSVVTDNFMKLLTERGYSFKTFAER*IVLDIKEKLTYVALDFDQEMKTAAESSQLEKSYELPDGNVIVIGNERFRCPEVCGVLFQPSLIRLESPRFGDXXXXXXXXXXXXXXXXHDCIFKTIMKCDIDIRKDLYANIVLSGGTTMFSGIGERITKELNALAPSNMKIEVVASPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPSIVHRKCF 1188
            A E++ ALV+DNGSG CKAGFAGDDAPR+VFPSIVGRPK P IMVGMDQKD+YVGDEAQSKRG+LTLK+PI+HGIVTNWDDMEKIWHHTFY+ELRV+PEEHPVLLTEAPL PKAN+ERMTQ MF+TFNVPAM+V  QAVLSLYASGRTTG V+DSGDGVSH VPIY+GYALP+AI RL+ AG  +T+  MK+LTERGY+F T AER IV DIKEKL+YVALDFD EMK AAESS+ EK+YELPDGN+I +GNERFRCPEV   LFQP+ I  E+                     HD  F++IMKCD+DIRKDLYAN+VLSGGTTMF+GIGER+TKEL ALAPS MKI+VVA PERKYSVWIGGSIL+SLSTFQQMWISK EYDESGP+IVHRKCF
Sbjct:    2 ADEEITALVIDNGSGMCKAGFAGDDAPRSVFPSIVGRPKMPGIMVGMDQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVSPEEHPVLLTEAPLNPKANRERMTQLMFETFNVPAMYVQIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAIQRLDLAGRDLTEFMMKILTERGYTFTTTAEREIVRDIKEKLSYVALDFDTEMKAAAESSEKEKTYELPDGNIITVGNERFRCPEV---LFQPNFIGKEASGI------------------HDTTFQSIMKCDVDIRKDLYANVVLSGGTTMFNGIGERMTKELTALAPSTMKIKVVAPPERKYSVWIGGSILSSLSTFQQMWISKQEYDESGPTIVHRKCF 376
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BLAST of mRNA_L-elsbetiae_contig18604.5440.1 vs. uniprot
Match: A0A7J6LJG5_PEROL (Actin, aortic smooth muscle n=212 Tax=root TaxID=1 RepID=A0A7J6LJG5_PEROL)

HSP 1 Score: 604 bits (1558), Expect = 1.150e-215
Identity = 301/396 (76.01%), Postives = 338/396 (85.35%), Query Frame = 1 
Query:    1 AVEDLQALVVDNGSGFCKAGFAGDDAPRAVFPSIVGRPKHPRIMVGMDQKDAYVGDEAQSKRGVLTLKHPIKHGIVTNWDDMEKIWHHTFYSELRVNPEEHPVLLTEAPLTPKANKERMTQTMFDTFNVPAMHVNTQAVLSLYASGRTTGCVLDSGDGVSHVVPIYDGYALPNAINRLNFAGSVVTDNFMKLLTERGYSFKTFAER*IVLDIKEKLTYVALDFDQEMKTAAESSQLEKSYELPDGNVIVIGNERFRCPEVCGVLFQPSLIRLESPRFGDXXXXXXXXXXXXXXXXHDCIFKTIMKCDIDIRKDLYANIVLSGGTTMFSGIGERITKELNALAPSNMKIEVVASPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPSIVHRKCF 1188
            A E++ ALV+DNGSG CKAGFAGDDAPR+VFPSIVGRPK P IMVGMDQKD+YVGDEAQSKRG+LTLK+PI+HGIVTNWDDMEKIWHHTFY+ELRV+PEEHPVLLTEAPL PKAN+ERMTQ MF+TFNVPAM+V  QAVLSLYASGRTTG V+DSGDGVSH VPIY+GYALP+AI RL+ AG  +T+  MK+LTERGY+F T AER IV DIKEKL+YVALDFD EMK AAESS+ EK+YELPDGN+I +GNERFRCPEV   LFQP+ I  E+                     HD  F++IMKCD+DIRKDLYAN+VLSGGTTMF+GIGER+TKEL ALAPS MKI+VVA PERKYSVWIGGSIL+SLSTFQQMWISK EYDESGP+IVHRKCF
Sbjct:    2 ADEEVAALVIDNGSGMCKAGFAGDDAPRSVFPSIVGRPKMPGIMVGMDQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVSPEEHPVLLTEAPLNPKANRERMTQLMFETFNVPAMYVQIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAIQRLDLAGRDLTEFMMKILTERGYTFTTTAEREIVRDIKEKLSYVALDFDTEMKAAAESSEKEKTYELPDGNIITVGNERFRCPEV---LFQPNFIGKEASGI------------------HDTTFQSIMKCDVDIRKDLYANVVLSGGTTMFNGIGERMTKELTALAPSTMKIKVVAPPERKYSVWIGGSILSSLSTFQQMWISKQEYDESGPTIVHRKCF 376
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BLAST of mRNA_L-elsbetiae_contig18604.5440.1 vs. uniprot
Match: A0A8E8PJD7_9STRA (Beta-actin n=4 Tax=Placidida TaxID=159340 RepID=A0A8E8PJD7_9STRA)

HSP 1 Score: 602 bits (1552), Expect = 9.460e-215
Identity = 301/396 (76.01%), Postives = 336/396 (84.85%), Query Frame = 1 
Query:    1 AVEDLQALVVDNGSGFCKAGFAGDDAPRAVFPSIVGRPKHPRIMVGMDQKDAYVGDEAQSKRGVLTLKHPIKHGIVTNWDDMEKIWHHTFYSELRVNPEEHPVLLTEAPLTPKANKERMTQTMFDTFNVPAMHVNTQAVLSLYASGRTTGCVLDSGDGVSHVVPIYDGYALPNAINRLNFAGSVVTDNFMKLLTERGYSFKTFAER*IVLDIKEKLTYVALDFDQEMKTAAESSQLEKSYELPDGNVIVIGNERFRCPEVCGVLFQPSLIRLESPRFGDXXXXXXXXXXXXXXXXHDCIFKTIMKCDIDIRKDLYANIVLSGGTTMFSGIGERITKELNALAPSNMKIEVVASPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPSIVHRKCF 1188
            A +++ ALVVDNGSG CKAGFAGDDAPR+VFPS+VGRPKHP IMVGMDQKDAYVGDEAQ+KRGVLTLK+PI+HGIVTNW+DMEKIWHHTFY+ELRV PEEHPVLLTEAPL PKAN+ERMTQ MF+TFNVPAM+VN QAVLSLYASGRTTGCVLDSGDGVSH VPIY+GYALP+AI RL+ AG  +T+  MK+LTERGYSF T A+R IV DIKEKL+YVALDF+QE KTAAESS LEK+YELPDGNVI IG+ERFRCPEV   LFQP LI  E+                     H   F TIMKCD+DIRKDLYAN+VLSGG+TMF GI ER+TKE+ ALAPS MK++VVA PERKYSVWIGGSIL+SLSTFQ MWISK+EYDE+GP IVHRKCF
Sbjct:    2 ADDEVAALVVDNGSGMCKAGFAGDDAPRSVFPSLVGRPKHPGIMVGMDQKDAYVGDEAQAKRGVLTLKYPIEHGIVTNWEDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRERMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGCVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYLMKILTERGYSFTTTADREIVRDIKEKLSYVALDFEQENKTAAESSALEKTYELPDGNVITIGSERFRCPEV---LFQPDLIGKEAA------------------GVHQTTFNTIMKCDVDIRKDLYANVVLSGGSTMFPGIAERLTKEITALAPSTMKVKVVAPPERKYSVWIGGSILSSLSTFQTMWISKSEYDEAGPGIVHRKCF 376
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BLAST of mRNA_L-elsbetiae_contig18604.5440.1 vs. uniprot
Match: M4TBT8_9METZ (Beta-actin n=3 Tax=Opisthokonta TaxID=33154 RepID=M4TBT8_9METZ)

HSP 1 Score: 596 bits (1537), Expect = 1.820e-212
Identity = 297/396 (75.00%), Postives = 331/396 (83.59%), Query Frame = 1 
Query:    1 AVEDLQALVVDNGSGFCKAGFAGDDAPRAVFPSIVGRPKHPRIMVGMDQKDAYVGDEAQSKRGVLTLKHPIKHGIVTNWDDMEKIWHHTFYSELRVNPEEHPVLLTEAPLTPKANKERMTQTMFDTFNVPAMHVNTQAVLSLYASGRTTGCVLDSGDGVSHVVPIYDGYALPNAINRLNFAGSVVTDNFMKLLTERGYSFKTFAER*IVLDIKEKLTYVALDFDQEMKTAAESSQLEKSYELPDGNVIVIGNERFRCPEVCGVLFQPSLIRLESPRFGDXXXXXXXXXXXXXXXXHDCIFKTIMKCDIDIRKDLYANIVLSGGTTMFSGIGERITKELNALAPSNMKIEVVASPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPSIVHRKCF 1188
            A ED+QALV+DNGSG CKAGFAGDDAPRAVFPSIVGRP+H  IMVGM QKD+YVGDEAQSKRG+LTLK+PI+HGIVTNWDDMEKIWHHTFY+ELRV PEEHPVLLTEAPL PKAN+E+MTQ MF+TFN PAM+VN QAVLSLYASGRTTG VLDSGDGVSH VPIY+GYALP+AI RL+ AG  +TD  MK+LTERGY+F T AER IV DIKEKL YVALD++QEM+TAA SS LEKSYELPDG VI IGNERFRCPE    LFQP+ + +ES                     HD  + +IMKCD+DIRKDLY+NIVLSGGTTMF GI +R+ KE+  LAPS MKI+++A PERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:    2 AEEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIMRLDLAGRDLTDYMMKILTERGYTFTTTAEREIVRDIKEKLAYVALDYEQEMQTAAASSSLEKSYELPDGQVITIGNERFRCPEA---LFQPAFLGMESAGI------------------HDTTYNSIMKCDVDIRKDLYSNIVLSGGTTMFPGIADRMQKEITTLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
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BLAST of mRNA_L-elsbetiae_contig18604.5440.1 vs. uniprot
Match: A0A1J3K0Z2_NOCCA (Actin, plasmodial isoform (Fragment) n=20 Tax=Eukaryota TaxID=2759 RepID=A0A1J3K0Z2_NOCCA)

HSP 1 Score: 595 bits (1535), Expect = 8.200e-212
Identity = 298/393 (75.83%), Postives = 328/393 (83.46%), Query Frame = 1 
Query:   10 DLQALVVDNGSGFCKAGFAGDDAPRAVFPSIVGRPKHPRIMVGMDQKDAYVGDEAQSKRGVLTLKHPIKHGIVTNWDDMEKIWHHTFYSELRVNPEEHPVLLTEAPLTPKANKERMTQTMFDTFNVPAMHVNTQAVLSLYASGRTTGCVLDSGDGVSHVVPIYDGYALPNAINRLNFAGSVVTDNFMKLLTERGYSFKTFAER*IVLDIKEKLTYVALDFDQEMKTAAESSQLEKSYELPDGNVIVIGNERFRCPEVCGVLFQPSLIRLESPRFGDXXXXXXXXXXXXXXXXHDCIFKTIMKCDIDIRKDLYANIVLSGGTTMFSGIGERITKELNALAPSNMKIEVVASPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPSIVHRKCF 1188
            D+QALVVDNGSG CKAGFAGDDAPRAVFPSIVGRP+H  +MVGM QKDAYVGDEAQSKRG+LTLK+PI+HGIVTNWDDMEKIWHHTFY+ELRV PEEHPVLLTEAPL PKAN+E+MTQ MF+TFN PAM+V  QAVLSLYASGRTTG VLDSGDGVSH VPIY+GYALP+AI RL+ AG  +TD  MK+LTERGYSF T AER IV DIKEKL YVALDF+QEM TAA SS LEKSYELPDG VI IGNERFRCPE    LFQPS + +ES                     H+  F +IMKCD+DIRKDLY N+VLSGGTTMF GIG+R+ KEL ALAPS M+I+++A PERKYSVWIGGSILASLSTFQQMWISK EYDESGP+IVHRKCF
Sbjct:   27 DVQALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHKGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMSTAASSSALEKSYELPDGQVITIGNERFRCPEA---LFQPSFLGMESAGI------------------HETTFNSIMKCDVDIRKDLYGNVVLSGGTTMFPGIGDRMQKELTALAPSTMRIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPAIVHRKCF 398
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18604.5440.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
ACT_FUCVE7.510e-23583.84Actin n=105 Tax=cellular organisms TaxID=131567 Re... [more]
A0A2P4X4C2_9STRA1.560e-22179.29Actin-1 n=1 Tax=Phytophthora palmivora var. palmiv... [more]
A0A0W8CH75_PHYNI3.290e-22074.94Uncharacterized protein n=1 Tax=Phytophthora nicot... [more]
A0A2R5GVQ0_9STRA6.990e-21777.27Actin n=17 Tax=Sar TaxID=2698737 RepID=A0A2R5GVQ0_... [more]
A0A3R7IGD6_9STRA1.400e-21681.47Uncharacterized protein n=187 Tax=Sar TaxID=269873... [more]
A0A7J6MLX9_PERCH8.130e-21676.01Actin, aortic smooth muscle n=7 Tax=Alveolata TaxI... [more]
A0A7J6LJG5_PEROL1.150e-21576.01Actin, aortic smooth muscle n=212 Tax=root TaxID=1... [more]
A0A8E8PJD7_9STRA9.460e-21576.01Beta-actin n=4 Tax=Placidida TaxID=159340 RepID=A0... [more]
M4TBT8_9METZ1.820e-21275.00Beta-actin n=3 Tax=Opisthokonta TaxID=33154 RepID=... [more]
A0A1J3K0Z2_NOCCA8.200e-21275.83Actin, plasmodial isoform (Fragment) n=20 Tax=Euka... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig18604contigL-elsbetiae_contig18604:117..1696 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score294.7
Seed ortholog evalue2.7e-77
Seed eggNOG ortholog2880.D7FQK6
Preferred nameACT1
KEGG koko:K05692,ko:K10355
KEGG Pathwayko04015,ko04145,ko04210,ko04390,ko04391,ko04510,ko04520,ko04530,ko04611,ko04670,ko04714,ko04745,ko04810,ko04919,ko04921,ko05100,ko05110,ko05130,ko05131,ko05132,ko05164,ko05205,ko05225,ko05410,ko05412,ko05414,ko05416,ko05418,map04015,map04145,map04210,map04390,map04391,map04510,map04520,map04530,map04611,map04670,map04714,map04745,map04810,map04919,map04921,map05100,map05110,map05130,map05131,map05132,map05164,map05205,map05225,map05410,map05412,map05414,map05416,map05418
Hectar predicted targeting categoryother localisation
GOsGO:0000287,GO:0000902,GO:0000904,GO:0001725,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003779,GO:0003785,GO:0005198,GO:0005200,GO:0005488,GO:0005507,GO:0005509,GO:0005515,GO:0005523,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005773,GO:0005829,GO:0005856,GO:0005858,GO:0005865,GO:0005875,GO:0005884,GO:0005886,GO:0005911,GO:0005929,GO:0005930,GO:0006950,GO:0006970,GO:0006996,GO:0007010,GO:0007015,GO:0007275,GO:0007517,GO:0007519,GO:0008092,GO:0008150,GO:0008154,GO:0009314,GO:0009416,GO:0009506,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009611,GO:0009628,GO:0009639,GO:0009642,GO:0009644,GO:0009651,GO:0009653,GO:0009719,GO:0009725,GO:0009733,GO:0009735,GO:0009791,GO:0009826,GO:0009845,GO:0009887,GO:0009888,GO:0009893,GO:0009932,GO:0009941,GO:0009987,GO:0010015,GO:0010033,GO:0010053,GO:0010054,GO:0010114,GO:0010218,GO:0010468,GO:0010604,GO:0010628,GO:0010927,GO:0014706,GO:0014866,GO:0014902,GO:0014904,GO:0015629,GO:0015630,GO:0016020,GO:0016043,GO:0016049,GO:0017022,GO:0019222,GO:0019904,GO:0021700,GO:0022607,GO:0022622,GO:0030016,GO:0030017,GO:0030027,GO:0030029,GO:0030036,GO:0030041,GO:0030054,GO:0030154,GO:0030175,GO:0030239,GO:0030240,GO:0030286,GO:0030312,GO:0031013,GO:0031032,GO:0031252,GO:0031432,GO:0031941,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032036,GO:0032432,GO:0032501,GO:0032502,GO:0032781,GO:0032838,GO:0032989,GO:0032991,GO:0034622,GO:0036156,GO:0036379,GO:0040007,GO:0042221,GO:0042641,GO:0042692,GO:0042802,GO:0042995,GO:0043085,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043292,GO:0043462,GO:0043933,GO:0044085,GO:0044093,GO:0044297,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044434,GO:0044435,GO:0044441,GO:0044444,GO:0044446,GO:0044447,GO:0044449,GO:0044463,GO:0044464,GO:0046872,GO:0046914,GO:0048046,GO:0048306,GO:0048364,GO:0048468,GO:0048469,GO:0048513,GO:0048518,GO:0048588,GO:0048589,GO:0048646,GO:0048729,GO:0048731,GO:0048741,GO:0048747,GO:0048764,GO:0048765,GO:0048767,GO:0048768,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050896,GO:0051017,GO:0051146,GO:0051258,GO:0051301,GO:0051336,GO:0051345,GO:0055001,GO:0055002,GO:0055044,GO:0060255,GO:0060485,GO:0060537,GO:0060538,GO:0060560,GO:0061061,GO:0061572,GO:0065003,GO:0065007,GO:0065009,GO:0070013,GO:0070925,GO:0071695,GO:0071840,GO:0071944,GO:0072132,GO:0080147,GO:0090130,GO:0090131,GO:0090351,GO:0090558,GO:0090627,GO:0097014,GO:0097159,GO:0097435,GO:0097517,GO:0098723,GO:0098858,GO:0099080,GO:0099081,GO:0099402,GO:0099512,GO:0099513,GO:0099568,GO:0120025,GO:0120038,GO:1901363,GO:1902494,GO:1904621,GO:1904623,GO:1905392
EggNOG free text desc.cytoskeleton organization
EggNOG OGsCOG5277@1,KOG0676@2759
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko03021,ko03029,ko03036,ko04147,ko04812
Exons2
Model size1188
Cds size492
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig18604.5440.1prot_L-elsbetiae_contig18604.5440.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig18604 1076..1567 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815775.6923265-UTR-L-elsbetiae_contig18604:116..5181622815775.6923265-UTR-L-elsbetiae_contig18604:116..518Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig18604 117..518 -
1691683094.4063547-UTR-L-elsbetiae_contig18604:116..5181691683094.4063547-UTR-L-elsbetiae_contig18604:116..518Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig18604 117..518 -
1622815775.703362-UTR-L-elsbetiae_contig18604:910..10751622815775.703362-UTR-L-elsbetiae_contig18604:910..1075Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig18604 911..1075 -
1691683094.4186656-UTR-L-elsbetiae_contig18604:910..10751691683094.4186656-UTR-L-elsbetiae_contig18604:910..1075Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig18604 911..1075 -
1622815775.7245903-UTR-L-elsbetiae_contig18604:1567..16961622815775.7245903-UTR-L-elsbetiae_contig18604:1567..1696Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig18604 1568..1696 -
1691683094.436317-UTR-L-elsbetiae_contig18604:1567..16961691683094.436317-UTR-L-elsbetiae_contig18604:1567..1696Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig18604 1568..1696 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815775.7145143-CDS-L-elsbetiae_contig18604:1075..15671622815775.7145143-CDS-L-elsbetiae_contig18604:1075..1567Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18604 1076..1567 -
1691683094.427523-CDS-L-elsbetiae_contig18604:1075..15671691683094.427523-CDS-L-elsbetiae_contig18604:1075..1567Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18604 1076..1567 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig18604.5440.1

>prot_L-elsbetiae_contig18604.5440.1 ID=prot_L-elsbetiae_contig18604.5440.1|Name=mRNA_L-elsbetiae_contig18604.5440.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=164bp
MVGMDQKDAYVGDEAQSKRGVLTLKHPIKHGIVTNWDDMEKIWHHTFYSE
LRVNPEEHPVLLTEAPLTPKANKERMTQTMFDTFNVPAMHVNTQAVLSLY
ASGRTTGCVLDSGDGVSHVVPIYDGYALPNAINRLNFAGSVVTDNFMKLL
TERGYSFKTFAER*
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mRNA from alignment at L-elsbetiae_contig18604:117..1696-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig18604.5440.1 ID=mRNA_L-elsbetiae_contig18604.5440.1|Name=mRNA_L-elsbetiae_contig18604.5440.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1580bp|location=Sequence derived from alignment at L-elsbetiae_contig18604:117..1696- (Laminarionema elsbetiae ELsaHSoW15)
GCAGTTGAGGACCTACAGGCGTTGGTGGTGGACAACGGGTCAGGGTTCTG
CAAAGCCGGCTTCGCCGGCGACGATGCGCCGCGCGCCGTTTTCCCCTCCA
TTGTTGGCCGCCCAAAACATCCCAGAATAATGGTCGGCATGGACCAGAAG
GACGCCTACGTCGGCGATGAGGCCCAGTCCAAGCGGGGCGTGCTCACTCT
GAAGCACCCCATCAAGCACGGAATCGTGACCAACTGGGACGACATGGAGA
AAATCTGGCACCACACCTTCTACAGCGAGCTCCGCGTGAACCCCGAGGAG
CACCCGGTGCTGCTCACCGAGGCCCCCCTCACCCCCAAGGCCAACAAGGA
GCGCATGACTCAAACCATGTTCGACACGTTCAACGTGCCCGCCATGCACG
TGAACACCCAGGCCGTGCTCTCCTTGTACGCCTCAGGCCGCACCACCGGG
TGCGTGCTGGACTCCGGGGACGGCGTGTCGCATGTCGTGCCAATCTATGA
TGGCTATGCGCTGCCCAATGCCATCAACCGGCTCAACTTCGCCGGCAGCG
TCGTGACGGACAACTTCATGAAGCTGCTGACAGAGCGCGGTTATTCCTTC
AAGACCTTCGCCGAGCGCTAGATCGTGCTCGACATCAAGGAGAAGCTCAC
GTACGTGGCCCTCGACTTCGACCAGGAGATGAAGACCGCCGCCGAGTCGT
CCCAGCTCGAGAAATCCTACGAGCTTCCCGACGGAAACGTTATCGTTATC
GGCAACGAGCGCTTCCGTTGCCCCGAGGTATGTGGGGTTTTTGGCTGATT
TTAGCTGTTGCTCGTGTTGCTTGGGTTTTTTTACACGAAGTACCGACTAG
GGTGAGCCGGTTTTGTATTCCCCCCGGGGCGGGGGTAACTGAAGCCTTAG
GATGTTCCGTGGCGATTTATGTACGTTGGCTTGCGAAGGCATGCACCGTG
CGATTCTGGCCTGGCAGCCCCTAAAGGCCACGCGTTCCACGAAACCACGT
AGTACTTACGGTACGTGCATCTGCGGCTGGATCCCCATCCTTTGTTGTCA
TCCCTGCATGACTGACTATGGTGAGCGTAAATGGCGGCCTTCCCAGTGTT
GACTCCCGTACCCATTGCAACGTCGAAACCGACTTATCACCTTCTCTCTT
TACCATGATCCCTACTGTGCCCCTACAGGTGCTCTTCCAGCCCTCGTTAA
TCCGATTAGAGTCGCCGCGCTTCGGCGACTCGCCGCGCTTCGACGAGTCG
CCGGGCATCGACGAGTCGCCGGGCATCCACGACTGTATCTTCAAAACCAT
CATGAAATGCGACATCGACATCCGCAAGGACCTCTACGCAAACATCGTCC
TATCGGGCGGAACCACCATGTTCTCCGGCATCGGCGAGCGCATAACCAAG
GAGCTCAACGCCCTCGCCCCCTCCAACATGAAGATCGAGGTGGTGGCGTC
CCCCGAGCGGAAATACTCGGTGTGGATCGGTGGCTCCATCCTCGCCTCAC
TCTCCACCTTCCAGCAGATGTGGATCTCTAAGGCTGAATACGACGAGTCC
GGCCCGTCGATCGTGCACCGCAAGTGCTTT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig18604:117..1696-

>mRNA_L-elsbetiae_contig18604.5440.1 ID=mRNA_L-elsbetiae_contig18604.5440.1|Name=mRNA_L-elsbetiae_contig18604.5440.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=984bp|location=Sequence derived from alignment at L-elsbetiae_contig18604:117..1696- (Laminarionema elsbetiae ELsaHSoW15)
ATGGTCGGCATGGACCAGAAGGACGCCTACGTCGGCGATGAGGCCCAGTC
CAAGCGGGGCGTGCTCACTCTGAAGCACCCCATCAAGCACGGAATCGTGA
CCAACTGGGACGACATGGAGAAAATCTGGCACCACACCTTCTACAGCGAG
CTCCGCGTGAACCCCGAGGAGCACCCGGTGCTGCTCACCGAGGCCCCCCT
CACCCCCAAGGCCAACAAGGAGCGCATGACTCAAACCATGTTCGACACGT
TCAACGTGCCCGCCATGCACGTGAACACCCAGGCCGTGCTCTCCTTGTAC
GCCTCAGGCCGCACCACCGGGTGCGTGCTGGACTCCGGGGACGGCGTGTC
GCATGTCGTGCCAATCTATGATGGCTATGCGCTGCCCAATGCCATCAACC
GGCTCAACTTCGCCGGCAGCGTCGTGACGGACAACTTCATGAAGCTGCTG
ACAGAGCGCGGTTATTCCTTCAAGACCTTCGCCGAGCGCTAGATGGTCGG
CATGGACCAGAAGGACGCCTACGTCGGCGATGAGGCCCAGTCCAAGCGGG
GCGTGCTCACTCTGAAGCACCCCATCAAGCACGGAATCGTGACCAACTGG
GACGACATGGAGAAAATCTGGCACCACACCTTCTACAGCGAGCTCCGCGT
GAACCCCGAGGAGCACCCGGTGCTGCTCACCGAGGCCCCCCTCACCCCCA
AGGCCAACAAGGAGCGCATGACTCAAACCATGTTCGACACGTTCAACGTG
CCCGCCATGCACGTGAACACCCAGGCCGTGCTCTCCTTGTACGCCTCAGG
CCGCACCACCGGGTGCGTGCTGGACTCCGGGGACGGCGTGTCGCATGTCG
TGCCAATCTATGATGGCTATGCGCTGCCCAATGCCATCAACCGGCTCAAC
TTCGCCGGCAGCGTCGTGACGGACAACTTCATGAAGCTGCTGACAGAGCG
CGGTTATTCCTTCAAGACCTTCGCCGAGCGCTAG
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