mRNA_L-elsbetiae_contig18586.5426.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig18586.5426.1 vs. uniprot
Match: A0A6H5JTW4_9PHAE (Aldo_ket_red domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTW4_9PHAE) HSP 1 Score: 349 bits (895), Expect = 1.700e-113 Identity = 165/192 (85.94%), Postives = 182/192 (94.79%), Query Frame = 3 Query: 3 VMACHPLRAATPEGKFELVDDALRGGLPTDYMDVCREVLQHFNLEIPQGQEPTEEEEEIRQGCRFLQQLVQDMNAQLTTFTSLEHYEAELGGSITPMIADKFEALDEDSADLLQKFFDRYGKMVRYSCAQRVRDMVQTGEGCPSGSHSLSEADPLQVFALGWVMGRPGVGCTVVEMERPDHVEQAFSALRRE 578 VMACHPLRAATPEGKFELVDDALRGGLPTDYMDVCREVL HFNLEIP+ +EPTEEEEEIRQGCRFLQQLVQDMNAQLTTFTSLEHYEAELGGSITPMIADKFEALD+DSADLLQKFFDRYGKMVRYSCAQRVRDM TGEGCPSG+H L++++PLQ++AL W+MG PGVGCTVVEME+P+ V + F+ALR++ Sbjct: 255 VMACHPLRAATPEGKFELVDDALRGGLPTDYMDVCREVLHHFNLEIPEDREPTEEEEEIRQGCRFLQQLVQDMNAQLTTFTSLEHYEAELGGSITPMIADKFEALDDDSADLLQKFFDRYGKMVRYSCAQRVRDMATTGEGCPSGAHLLADSEPLQIYALRWLMGSPGVGCTVVEMEQPEKVAEGFAALRQD 446
BLAST of mRNA_L-elsbetiae_contig18586.5426.1 vs. uniprot
Match: D7G6R3_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6R3_ECTSI) HSP 1 Score: 217 bits (553), Expect = 2.320e-60 Identity = 113/153 (73.86%), Postives = 120/153 (78.43%), Query Frame = 3 Query: 3 VMACHPLRAATPEGKFELVDDALRGGLPTDYMDVCREVLQHFNLEIPQGQEPTEEEEEIRQGCRFLQQLVQDMNAQLTTFTSLEHYEAELGGSITPMIADKFEALDEDSADLLQKFFDRYGKMV--------RYSCAQRVRDMVQTGEGCPSG 437 VMACHPLRAATPEGKFELVDDALRGGLP DYMDVCREVL HFNLEIP+ +EPTEEEEEIRQGCRFLQQLVQDMN QLT FTSLEHYEAELGGSITPMIADKFEALD+DSADLLQ+ + + R A R+MV G G Sbjct: 255 VMACHPLRAATPEGKFELVDDALRGGLPKDYMDVCREVLHHFNLEIPEDREPTEEEEEIRQGCRFLQQLVQDMNTQLTKFTSLEHYEAELGGSITPMIADKFEALDDDSADLLQERWPALASGICTLPVVPFRRGSASLTRNMVGGGNSNSGG 407
BLAST of mRNA_L-elsbetiae_contig18586.5426.1 vs. uniprot
Match: A0A7S2RKZ0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RKZ0_9STRA) HSP 1 Score: 157 bits (398), Expect = 6.090e-40 Identity = 85/196 (43.37%), Postives = 119/196 (60.71%), Query Frame = 3 Query: 3 VMACHPLRA--ATPEGKFELVDDALRGGL--PTDYMDVCREVLQHFNLEIPQGQEPTEEEEEIRQGCRFLQQLVQDMNAQLTTFTSLEHYEAELGGSITPMIADKFEALDEDSADLLQKFFDRYGKMVRYSCAQRVRDMVQTGEGCPSGSHSLSEADPLQVFALGWVMGRPGVGCTVVEMERPDHVEQAFSALRRE 578 V + PL A A+P ++ + D G P YM VC+E L F ++P ++PT +E E+ Q CR++Q L+QDMN QL F S+ +E EL SI PM+ DKFE LD DSA LLQ FF+++ MVRY CA +R V++ E CPSG+H L E + LQ AL WV+ +PG+ V+ + HV+QA + R+ Sbjct: 234 VGSTRPLTALLASPVQTWQRIADLAEDGSRPPEGYMQVCQEALDRFRFDLPTDRDPTPDEVELFQACRWIQTLIQDMNQQLVQFGSVAQFEQELKESILPMLNDKFEELDADSAALLQAFFEQFHAMVRYHCAVEMRKRVES-EACPSGAHHLGENESLQHRALSWVLEQPGIATVVLGVTASAHVDQALEIMARQ 428
BLAST of mRNA_L-elsbetiae_contig18586.5426.1 vs. uniprot
Match: A0A835ZBE8_9STRA (Aldo_ket_red domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBE8_9STRA) HSP 1 Score: 157 bits (398), Expect = 8.780e-40 Identity = 80/168 (47.62%), Postives = 105/168 (62.50%), Query Frame = 3 Query: 72 RGGLPTDYMDVCREVLQHFNLEIPQGQEPTEEEEEIRQGCRFLQQLVQDMNAQLTTFTSLEHYEAELGGSITPMIADKFEALDEDSADLLQKFFDRYGKMVRYSCAQRVRDMVQTGEGCPSGSHSLSEADPLQVFALGWVMGRPGVGCTVVEMERPDHVEQAFSALRR 575 RG P DYMDVCREV++HF P+G+EPT+EE E QGC+F+QQLVQDMN QL +F + EH + EL +I PMI KF+ LD S LQ F DRYG MV Y+CA+R+RD + P G + D +L W+ RP V +V M +P +V+ A + L+R Sbjct: 294 RGEPPQDYMDVCREVIEHFTYPPPEGREPTQEEIETMQGCQFMQQLVQDMNQQLGSFATYEHLQQELAHAIIPMINAKFDELDATSVKHLQAFLDRYGDMVTYNCAERLRDAILAAH--PDGGMEPAPGDTWAQHSLRWLQARPHVDTVLVGMHQPRYVQDALAVLQR 459
BLAST of mRNA_L-elsbetiae_contig18586.5426.1 vs. uniprot
Match: A0A7S2E258_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2E258_9STRA) HSP 1 Score: 154 bits (389), Expect = 8.500e-39 Identity = 82/195 (42.05%), Postives = 116/195 (59.49%), Query Frame = 3 Query: 3 VMACHPLRAATPEGKFELVDDALRGGL-----PTDYMDVCREVLQHFNLEIPQGQEPTEEEEEIRQGCRFLQQLVQDMNAQLTTFTSLEHYEAELGGSITPMIADKFEALDEDSADLLQKFFDRYGKMVRYSCAQRVRDMVQTGEGCPSGSHSLSEADPLQVFALGWVMGRPGVGCTVVEMERPDHVEQAFSALR 572 VM+C PL P+ + L+ L PT Y++VC + L+HF+ E+P +P+ E+ E+ + CR+LQ L+QD+N QL F S+E Y+ EL G IT M+ KFEALDEDSA+LL FF +YG MVRY CA + R + T C SG HS+ PLQ FAL W + + G+ + M D V+ A + ++ Sbjct: 227 VMSCRPLTIIEPDNTADPAAPPLQRRLTSSPDPTGYLEVCAQALEHFHHEVPDSSQPSAEDIELVEACRWLQILIQDLNRQLPLFRSVEEYQRELVG-ITQMLEGKFEALDEDSAELLHTFFQKYGDMVRYHCAAQTRAFL-TSPLCSSGPHSIKPDTPLQHFALEWALKQSGIAHVSLGMTHEDQVDDALAIVK 419
BLAST of mRNA_L-elsbetiae_contig18586.5426.1 vs. uniprot
Match: A0A4D9CPH7_9STRA (Aldo_ket_red domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CPH7_9STRA) HSP 1 Score: 125 bits (314), Expect = 5.240e-28 Identity = 78/176 (44.32%), Postives = 98/176 (55.68%), Query Frame = 3 Query: 3 VMACHPLRAATPEGKFELVDDA-LRGGLPTDYMDVCREVLQHFN----LEIPQGQEPTEEEEEIRQGCRFLQQLVQDMNAQLTTFTSLEHYEAELGGSITPMIADKFEALDEDSADLLQKFFDRYGKMVRYSCAQRVRDMVQTGEGCPSGSHSLS-----EADPLQVFALGWVMGR 500 V A PL A + G + LV+ A L G P YM+ CR L+ FN E +E TEEE E R+GCR +Q L++DMN QLT+FTS E Y EL I PMIA FE+LDED+AD LQ FF +YG+MVRY A R E C + H L + L +AL W + + Sbjct: 265 VFANRPLTAVSQGGLYRLVNKAALSGEPPGGYMEACRTALEVFNPTSLFEGRAEKELTEEELETREGCRIIQDLIRDMNRQLTSFTSTETYTQELERRIIPMIASTFESLDEDAADALQAFFVKYGEMVRYHAAMRAV------EACKAAGHVLGGGVGKAGEALHEYALRWSLDK 434
BLAST of mRNA_L-elsbetiae_contig18586.5426.1 vs. uniprot
Match: A0A7S3V5K1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V5K1_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 1.010e-16 Identity = 71/223 (31.84%), Postives = 111/223 (49.78%), Query Frame = 3 Query: 6 MACHPLRAATPEGKFELVD-------DALRGG-------LPTDYMDVCREVLQHFN----LEIP--QGQEPTEEEEEIRQGCRFLQQLVQDMNAQLTT-------FTSLEHYEAELGGSITPMIADKFEALDEDSADLLQKFFDRYGKMVRYSCAQRVRDMVQTG-EGCPSGSHSLSEADPLQVFALGWVM----------GR-PGVGCTVVEMERPDHVEQA 557 + C+P R F LVD D R G +P Y + E + HF+ LEI + +E T EE E GC+ LQ ++ D++A LT+ + S + YE +L + P+I D FE LDE S+DLLQ+FF +G VR+S A+ R ++++G +G + + + + PLQ FAL +++ GR P + V + +HV +A Sbjct: 340 LTCYPDRGTGSGLPFNLVDYLIPTSEDGSRMGWSHQIASMPLFYTTLLNETMAHFDATHLLEIKAEEERELTVEERETLDGCKLLQSMIHDLDANLTSVAGGSTQYRSFQAYENDLYTKVVPLIHDTFEELDEGSSDLLQRFFRAHGTAVRHSIARTTRALLKSGGDGGGAERYEIPDEVPLQEFALDFLLRQDCELAGISGRQPVIDRVVAGCSKAEHVVEA 562
BLAST of mRNA_L-elsbetiae_contig18586.5426.1 vs. uniprot
Match: A0A8J2SLW1_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SLW1_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 8.150e-16 Identity = 61/190 (32.11%), Postives = 93/190 (48.95%), Query Frame = 3 Query: 3 VMACHPLRAATPEGKFELVDDALRGGLPTDYMDVCREVLQHFNLEIPQGQEPTEEEEEIRQGCRFLQQLVQDMNAQLTTFTSLEHYEAELGGSITPMIADKFEALDEDSADLLQKFFDRYGKMVRYSCAQRVRDMVQTGEGCPSGSHSLSEADPLQVFALGWVMGRP--GVGCTVVEMERPDHVEQAFSA 566 ++ C PLR G F A Y+ + L HF E P G + ++ +GC +++QLV D+NA L F S E +E E+ + P++ KFEALDE SAD+LQ +F+ YG+ VR + RD C + + L + + L+ +AL + RP V V +E D + +A A Sbjct: 176 LLGCAPLRNLATGGVF--ASPAAGAADLAGYVPASQRALAHF--EAPAGADA-----DVVEGCAWVRQLVGDLNASLAQFDSFERWEHEIATQLVPLLHAKFEALDEASADVLQGYFEAYGRAVRANADLAARDAAAR---CAAAAAPLRDGERLEAWALRDALARPLARVSVGVRSVEDVDGLARALEA 353
BLAST of mRNA_L-elsbetiae_contig18586.5426.1 vs. uniprot
Match: A0A7S3K6F9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K6F9_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 2.400e-11 Identity = 59/192 (30.73%), Postives = 88/192 (45.83%), Query Frame = 3 Query: 3 VMACHPLRAATPEGKFELVDDAL-----RGGLPTDYMDVCREVLQHFNLEIPQGQEPTEEEEEIRQGCRFLQQLVQDMNAQLTTFTSLEHYEAELGGSITPMIADKFEALDEDSADLLQKFFDRYGKMVRYSCAQRVRDMVQTGEGCPSGSHSLSEADPLQVFALGWVMG-RPGVGCTVVEMERPDHVEQAF 560 ++ PL + TP +LVD RG Y C ++QH P + +E+ R G +L QLV D+N +T T +E EL I PMI +KF+ LD+ +ADLL KFF YGK+V + R + P+G + PL +AL V RP + + +E + ++ A Sbjct: 195 LVGIRPLLSTTPV-HMQLVDHPNTEGVDRGATQRAYFSACEAIVQHLTP-------PEDADEDTRAGADWLLQLVADLNESVTKMTP-SAWEYELSTQIGPMIHNKFDGLDDQTADLLFKFFQNYGKLVSITAQDCARAAAASP---PTGVLPIKPDQPLAEWALRHVFHQRPELTYISLAVESTNDIDVAL 374 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18586.5426.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig18586.5426.1 >prot_L-elsbetiae_contig18586.5426.1 ID=prot_L-elsbetiae_contig18586.5426.1|Name=mRNA_L-elsbetiae_contig18586.5426.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=194bp MACHPLRAATPEGKFELVDDALRGGLPTDYMDVCREVLQHFNLEIPQGQEback to top mRNA from alignment at L-elsbetiae_contig18586:383..2897- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig18586.5426.1 ID=mRNA_L-elsbetiae_contig18586.5426.1|Name=mRNA_L-elsbetiae_contig18586.5426.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2515bp|location=Sequence derived from alignment at L-elsbetiae_contig18586:383..2897- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig18586:383..2897- >mRNA_L-elsbetiae_contig18586.5426.1 ID=mRNA_L-elsbetiae_contig18586.5426.1|Name=mRNA_L-elsbetiae_contig18586.5426.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1164bp|location=Sequence derived from alignment at L-elsbetiae_contig18586:383..2897- (Laminarionema elsbetiae ELsaHSoW15)back to top |