mRNA_L-elsbetiae_contig1850.5381.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1850.5381.1
Unique NamemRNA_L-elsbetiae_contig1850.5381.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig1850.5381.1 vs. uniprot
Match: A0A6H5JTZ2_9PHAE (CPO-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JTZ2_9PHAE)

HSP 1 Score: 344 bits (883), Expect = 1.190e-112
Identity = 158/232 (68.10%), Postives = 197/232 (84.91%), Query Frame = 2 
Query:    2 LEESKGAADDPVRQFAISFFDNKFNSLVPLKITYFLGRSDTLSMLDFIEVTVKTQLAIYNSLILAWREKIRHDAPRPPSVVRNEIGDEIVEAYAGPDVGVQNITASEWEPFIRTMPHSEYPSASACTCEAFVNSMKVWAETDKIDPPLEFPPPEFDRPVLTFSSWSEVSKMCGDSRVWGGMHFEGAVPAGAELCGGVDMPISVSASIDALVAGDASAAILNRDIGKLMIRPL 697
            LE S  AA DP + FAIS FDNKFNSL PLKI YF  R D LS++DF+E++VK+QLAIYNS++LAWREK+RHDAPRP SV+RNE+GDE+V+AYAGPD+G+Q I ASEWEP+IRTMPHSEYPS S+C CE F +++++WA  D IDPP+ FPPPEF  P+L FSSW+E+S+MCGDSRVW G+HFE AVPAGAELCGG ++ +S++ASIDAL AGD SAA+  RD+G+L++RPL
Sbjct:  254 LEASTVAAYDPAKLFAISLFDNKFNSLPPLKIVYFFDRGD-LSLMDFLELSVKSQLAIYNSVLLAWREKVRHDAPRPTSVIRNELGDELVDAYAGPDIGIQTIKASEWEPYIRTMPHSEYPSGSSCICEGFASALRLWAGNDIIDPPIGFPPPEFGGPILEFSSWTEISQMCGDSRVWAGLHFEEAVPAGAELCGGDEIAVSIAASIDALTAGDESAAVFKRDVGELVLRPL 484
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BLAST of mRNA_L-elsbetiae_contig1850.5381.1 vs. uniprot
Match: A0A6H5K7C3_9PHAE (CPO-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K7C3_9PHAE)

HSP 1 Score: 297 bits (761), Expect = 4.730e-95
Identity = 146/238 (61.34%), Postives = 180/238 (75.63%), Query Frame = 2 
Query:    2 LEESKGAADDPVRQFAISFFDNKFNSLVPLKITYFLGRSDT---LSMLDFIEVTVKTQLAIYNSLILAWREKIRHDAPRPPSVVRNEIGDEIVEAYAGPDVGVQNITASEWEPFIRTMPHSEYPSASACTCEAFVNSMKVWAETDKIDPPLEFPP----PEFDRPVLTFSSWSEVSKMCGDSRVWGGMHFEGAVPAGAELCGGVDMPISVSASIDALVAGDASAAILNRDIGKLMIRP 694
            L E+   A+ P +QFAISFFDNKFNSL+PLKI +FL RS T    +  DF +VT++ QLAIYN ++LAW+EKIRHD PRPP++V++++GD +VEAYAGP  GVQ I ASEWEPFIRTMPHSEYPS S+C CEAF   ++ +   D I+P L+FPP    P FD P L F+SWSE+S++CGDSR WGGMHF GAVPAGAELCG  DM  S+  S++ L  GD SAAI   DIG+LM+RP
Sbjct:  187 LNETATTAESPYKQFAISFFDNKFNSLIPLKIAFFL-RSTTQEDYTATDFYQVTLEVQLAIYNGILLAWKEKIRHDRPRPPTMVKHKLGDALVEAYAGPGQGVQTIKASEWEPFIRTMPHSEYPSGSSCLCEAFAKQIENFLGDDTIEPALQFPPGPPPPGFDAPPLEFASWSEISQVCGDSRAWGGMHFAGAVPAGAELCGSTDMAKSIHDSLERLKVGDESAAIFTTDIGELMVRP 423
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BLAST of mRNA_L-elsbetiae_contig1850.5381.1 vs. uniprot
Match: D8LSP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSP1_ECTSI)

HSP 1 Score: 292 bits (748), Expect = 2.210e-93
Identity = 146/237 (61.60%), Postives = 177/237 (74.68%), Query Frame = 2 
Query:    2 LEESKGAADDPVRQFAISFFDNKFNSLVPLKITYFLGRSDT---LSMLDFIEVTVKTQLAIYNSLILAWREKIRHDAPRPPSVVRNEIGDEIVEAYAGPDVGVQNITASEWEPFIRTMPHSEYPSASACTCEAFVNSMKVWAETDKIDPPLEFPP---PEFDRPVLTFSSWSEVSKMCGDSRVWGGMHFEGAVPAGAELCGGVDMPISVSASIDALVAGDASAAILNRDIGKLMIRP 694
            L+ES   AD P +QFA+SFFDNKF SL+PLKI +F  R  T    +  DF +VTV+ QLAIYN ++LAW+EKI HD PRPPS++R+ +GDE+VEAYAGPD GVQ + ASEWEPFIRTMPHSEYPSASAC CE F   ++ +   DKI+P LEFPP   P      L F+SWSE+S++CGDSR+WGGMHF GAV AGAELCGG DM  S+  S + L AGD SAAI   D+G+LM+RP
Sbjct:  166 LDESAITADSPYKQFAVSFFDNKFTSLIPLKIAFF-NRGTTKEDYTETDFYQVTVEVQLAIYNGILLAWKEKINHDRPRPPSMIRHLLGDELVEAYAGPDQGVQTMKASEWEPFIRTMPHSEYPSASACLCEGFARQVENFLGDDKIEPALEFPPGPPPAGLNASLEFASWSEISQVCGDSRIWGGMHFAGAVLAGAELCGGEDMAKSIHDSFERLKAGDESAAIFKSDVGELMVRP 401
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BLAST of mRNA_L-elsbetiae_contig1850.5381.1 vs. uniprot
Match: A0A6H5L4I1_9PHAE (CPO-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4I1_9PHAE)

HSP 1 Score: 281 bits (719), Expect = 2.150e-87
Identity = 147/236 (62.29%), Postives = 177/236 (75.00%), Query Frame = 2 
Query:    2 LEESKGAADDPVRQFAISFFDNKFNSLVPLKITYFLGRSDTLSMLDFIEVTVKTQLAIYNSLILAWREKIRHDAPRPPSVVRNEIGDEIVEAYAGPDVGVQNITASEW-EPFIRTMPHSEYPSASA---CTCEAFVNSMKVWAETDKIDPPLEFPPPEFDRPVLTFSSWSEVSKMCGDSRVWGGMHFEGAVPAGAELCGGVDMPISVSASIDALVAGDASAAILNRDIGKLMIRPL 697
            LE SK AADDP +QFAISFFDNK  SL+PL   YF  R DTLS L+F +V +K QL IYN ++L+WREKIRHDAPRPPSVVRNEIGDEIVEAYAGPD GVQN+TASEW +  +R    ++            E    + +VWA TD I+PPLE   PE D P+++F+SWSE+S+MCGDSRVWGG+HFE +VPAG ELCGG +M IS++ASID L AGD S A+  RDIG+LM+RPL
Sbjct:  302 LEASKLAADDPAKQFAISFFDNKATSLLPLMTDYFAQRRDTLSRLEFFKVNLKLQLGIYNGVVLSWREKIRHDAPRPPSVVRNEIGDEIVEAYAGPDSGVQNMTASEWVDRSVRIFQGTDTERKQERFHMQQEYHKKTGRVWAGTDTINPPLE--QPEED-PLVSFASWSEISEMCGDSRVWGGLHFEESVPAGVELCGGDEMAISIAASIDGLTAGDESVAVFKRDIGELMLRPL 534
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BLAST of mRNA_L-elsbetiae_contig1850.5381.1 vs. uniprot
Match: D8LQR8_ECTSI (NapH1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQR8_ECTSI)

HSP 1 Score: 196 bits (499), Expect = 3.640e-59
Identity = 95/152 (62.50%), Postives = 115/152 (75.66%), Query Frame = 2 
Query:  239 VVRNEIGDEIVEAYAGPDVGVQNITASEWEPFIRTMPHSEYPSASACTCEAFVNSMKVWAETDKIDPPLEFPP---PEFDRPVLTFSSWSEVSKMCGDSRVWGGMHFEGAVPAGAELCGGVDMPISVSASIDALVAGDASAAILNRDIGKLM 685
            ++R+ +GDE+VEAYAGPD GVQN+ ASEWEPFIRTMPHSEYPSASAC CE F   ++ +   DKI+P L+FPP   P      L F+SWSE+S++CGDSRVW GMHF GAVPAGAELCGG DM  S+  S + L AGD SAA+   D+G+LM
Sbjct:    1 MIRHLLGDELVEAYAGPDQGVQNVKASEWEPFIRTMPHSEYPSASACLCEGFARQVENFLGNDKIEPALQFPPGPPPAGLNASLEFASWSEISQVCGDSRVWSGMHFAGAVPAGAELCGGEDMAKSIHDSFERLKAGDESAAVFKSDVGELM 152
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BLAST of mRNA_L-elsbetiae_contig1850.5381.1 vs. uniprot
Match: D8LLS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLS4_ECTSI)

HSP 1 Score: 184 bits (468), Expect = 1.020e-50
Identity = 100/233 (42.92%), Postives = 136/233 (58.37%), Query Frame = 2 
Query:    2 LEESKGAADDPVRQFAISFFDNKFNSLVPLKITYFLGRSDTL--SMLDFIEVTVKTQLAIYNSLILAWREKIRHDAPRPPSVVRNEIGDEIVEAYAGPDVGVQNITASEWEPFIRTMPHSEYPSASACTCEAFVNSMKVWAETDKIDPPLEFPPPEFDRPVLTFSSWSEVSKMCGDSRVWGGMHFEGAVPAGAELCGGVDMPISVSASIDALVAGDASAAILNRDIGKLMIRP 694
            L+ES   AD   +Q AISFFD+K NSL+PL + YFL  +     +  +F++++++ QLA+YN ++L W+EKI HD PRP +++++++GDE+VEAYAGP  GVQ + ASEWE F+RT P SEYPSASAC CE                                                       GAVPAGAELCGG+DM +S+  S++ L AGD SAAI   D+G+LM+RP
Sbjct:  310 LDESAMTADSLYKQVAISFFDDKVNSLIPLSVDYFLRNTTQAEYTTTEFLQLSLEIQLALYNGVLLTWKEKIHHDRPRPSTMIKHKLGDELVEAYAGPGEGVQTMKASEWESFMRTNPTSEYPSASACLCE-------------------------------------------------------GAVPAGAELCGGMDMAMSIHDSLERLKAGDESAAIFKTDVGELMVRP 487
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BLAST of mRNA_L-elsbetiae_contig1850.5381.1 vs. uniprot
Match: A0A8J5X3W0_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X3W0_DIALT)

HSP 1 Score: 159 bits (403), Expect = 5.940e-41
Identity = 87/211 (41.23%), Postives = 118/211 (55.92%), Query Frame = 2 
Query:   11 SKGAADDPVRQFAISFFDNKFNSLVPLKITYFLGRSDTLSMLDFIEVTVKTQLAIYNSLILAWREKIRHDAPRPPSVVRNEIGDEIVEAYAGPDVGVQNITASEWEPFIRTMPHSEYPSASACTCEAFVNSMKVWAETDKIDP-------PLEFP------------PPEFDRPVLTFSSWSEVSKMCGDSRVWGGMHFEGAVPAGAELCG 586
            S+  A +  ++  + FFDNKF SL+PL + Y            FI + V T  AIY++ I+ W+EK+RHD  RPPSV++++  DE V +Y GP     +I  S+WE +IR MPH+EYPS S+C C AFV ++  +       P       PL  P             P+ D  VLTF+SW EV  +CG+SR+ GGMHF  AVP G  LCG
Sbjct:  289 SRTGALNSTKKMEVEFFDNKFTSLIPLLVQYTARLGVNADSFHFIWLDVATAAAIYDATIVGWKEKVRHDLVRPPSVIQSQFRDETVMSYRGPSEEPGDIKGSDWEAYIRIMPHAEYPSGSSCLCRAFVEALVTFEGITAAAPVPPMGAGPLVQPFAAGSSSVEPGKTPDTDI-VLTFASWDEVVHVCGESRLDGGMHFTAAVPDGERLCG 498
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BLAST of mRNA_L-elsbetiae_contig1850.5381.1 vs. uniprot
Match: R7QSC8_CHOCR (PAP2/haloperoxidase-like protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSC8_CHOCR)

HSP 1 Score: 156 bits (394), Expect = 9.570e-40
Identity = 87/209 (41.63%), Postives = 116/209 (55.50%), Query Frame = 2 
Query:    2 LEESKGAADDPVRQFAISFFDNKFNSLVPLKITYFLGRSDTLSMLDFIEVTVKTQLAIYNSLILAWREKIRHDAPRPPSVVRNEIGDEIVEAYAGPDVGVQNITASEWEPFIRTMPHSEYPSASACTCEAFVNSMKVWAETDKI-----DPPLEFPPP------EFDRP----VLTFSSWSEVSKMCGDSRVWGGMHFEGAVPAGAELC 583
            +  S   A D V +  +  FDNKF+SLV L+I              FIE    +  A+Y S++L W+EKI HDA RPPS +  ++  + + AYAG + G + + A +WEP+IRTMPHSEYPS SAC C  F  SMK++  +D         PL           E  RP     L ++SWS V++ CG SR+ GGMHF  +VPAGA LC
Sbjct:  279 IRRSAAMAQDDVAKAKVQIFDNKFSSLVFLQIDLLFANGFHADSWKFIEADTISAAALYESVMLVWKEKIAHDACRPPSRMVRDLAGQKIFAYAGANQGKKQMRAEDWEPYIRTMPHSEYPSGSACFCAVFAESMKLFFGSDNFLANGKPSPLSLKVAAGQSLVEPGRPSADVTLVYNSWSAVAEDCGKSRLTGGMHFTASVPAGAALC 487
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BLAST of mRNA_L-elsbetiae_contig1850.5381.1 vs. uniprot
Match: A0A7S3Z7G8_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z7G8_9EUKA)

HSP 1 Score: 129 bits (325), Expect = 5.930e-30
Identity = 88/232 (37.93%), Postives = 120/232 (51.72%), Query Frame = 2 
Query:   38 RQFAISFFDNKFNSLVPLKITYFLGRSDTLSMLDFIEVTVKTQLAIYNSLILAWREKIRHDAPRPPSVVRNEIGDEIVEAYAGPDV---------GVQNITASEWEPFIRTMPHSEYPSASACTCEAFVNSMKVWAETDKIDPPLEFP--------PPEFDRPV----LTFSSWSEVSKMCGDSRVWGGMHFEGAVPAGAELCGGVDMPISVSASIDALVAGDASAAILNRD 670
            R  A+  FD+KF S++P  I Y +          F         A+Y+ +IL WREK+  DA RP ++ +  IG      YAGP           G + I  +E+EP IRTMPHSEYPSASAC C+AF +++     +D I PP             P   RPV    L F+ WSE++ +CG SR++GGMHF  AVPAGA LC  +    S S +   L +G  +  +L+ D
Sbjct:  294 RLAAVEIFDSKFTSILPAWIDYAVANG--FDNWGFWSTQTLLSTALYDGVILVWREKVIFDAIRPTTLAQT-IGRGTAFTYAGPYGSNFGGPFVDGPEVIKQTEFEPVIRTMPHSEYPSASACVCQAFFDALADKLGSDSITPPATLGIQAGGTRNSPGL-RPVEDVNLIFNLWSEMNTLCGQSRLFGGMHFTKAVPAGANLCKNIGK--SASTAFAQLESGALTEGLLDLD 519
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BLAST of mRNA_L-elsbetiae_contig1850.5381.1 vs. uniprot
Match: A0A7S1ZRM1_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZRM1_TRICV)

HSP 1 Score: 126 bits (317), Expect = 5.750e-29
Identity = 77/211 (36.49%), Postives = 118/211 (55.92%), Query Frame = 2 
Query:    2 LEESKGAADDPVRQFAISFFDNKFNSLVPLKITYFLGRSD-TLSMLDFIEVTVKTQLAIYNSLILAWREKIRHDAPRPPSVVRNEIGDEIVEAYAGPDVGVQNITASEWEPFIRTMPHSEYPSASACTCEA---FVNSMKVWAETDKIDPPL--------EFPPPEFDRPVLT--FSSWSEVSKMCGDSRVWGGMHFEGAVPAGAELCGGV 592
            +E+ +   +  VR+ A+ FFDNK N    L +     RSD  LS+ + +   V      ++S++LAWREK+ HD  RP +VV+  +GD+ + +Y GP +G  +++A +W P+IRTMPH+EYPS SAC C A   +V++       +   P +        E  P       LT  F++ +E+  MCG SR+WGGMHF  +V    +LC G+
Sbjct:  291 IEQVRLTGESDVRKIAVEFFDNKINLAGGLIMRL---RSDFLLSLEEQLMYHVGYTTIEHDSVVLAWREKVEHDLIRPTTVVQR-MGDKTINSYRGPFMGTGDMSARDWHPYIRTMPHAEYPSGSACLCTAVAEYVDAYMADQHGNNTYPTIWEFAAGSSETEPGVVPAKALTLSFATMTELRDMCGKSRLWGGMHFTKSVQDSYQLCKGL 497
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1850.5381.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JTZ2_9PHAE1.190e-11268.10CPO-like protein n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
A0A6H5K7C3_9PHAE4.730e-9561.34CPO-like protein n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
D8LSP1_ECTSI2.210e-9361.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4I1_9PHAE2.150e-8762.29CPO-like protein n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
D8LQR8_ECTSI3.640e-5962.50NapH1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 Re... [more]
D8LLS4_ECTSI1.020e-5042.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8J5X3W0_DIALT5.940e-4141.23Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
R7QSC8_CHOCR9.570e-4041.63PAP2/haloperoxidase-like protein n=1 Tax=Chondrus ... [more]
A0A7S3Z7G8_9EUKA5.930e-3037.93Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A7S1ZRM1_TRICV5.750e-2936.49Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1850contigL-elsbetiae_contig1850:16373..21834 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score297.7
Seed ortholog evalue5.5e-78
Seed eggNOG ortholog2880.D8LQU5
Hectar predicted targeting categoryother localisation
EggNOG OGs2DGTT@1,2S5V4@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons8
Model size1005
Cds size840
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1850.5381.1prot_L-elsbetiae_contig1850.5381.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1850 18993..21799 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815771.1556911-UTR-L-elsbetiae_contig1850:16372..164831622815771.1556911-UTR-L-elsbetiae_contig1850:16372..16483Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1850 16373..16483 +
1691683091.5891256-UTR-L-elsbetiae_contig1850:16372..164831691683091.5891256-UTR-L-elsbetiae_contig1850:16372..16483Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1850 16373..16483 +
1622815771.1748874-UTR-L-elsbetiae_contig1850:18973..189921622815771.1748874-UTR-L-elsbetiae_contig1850:18973..18992Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1850 18974..18992 +
1691683091.6016386-UTR-L-elsbetiae_contig1850:18973..189921691683091.6016386-UTR-L-elsbetiae_contig1850:18973..18992Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1850 18974..18992 +
1622815771.279066-UTR-L-elsbetiae_contig1850:21799..218341622815771.279066-UTR-L-elsbetiae_contig1850:21799..21834Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1850 21800..21834 +
1691683091.6841457-UTR-L-elsbetiae_contig1850:21799..218341691683091.6841457-UTR-L-elsbetiae_contig1850:21799..21834Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1850 21800..21834 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815771.188946-CDS-L-elsbetiae_contig1850:18992..190701622815771.188946-CDS-L-elsbetiae_contig1850:18992..19070Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1850 18993..19070 +
1691683091.610344-CDS-L-elsbetiae_contig1850:18992..190701691683091.610344-CDS-L-elsbetiae_contig1850:18992..19070Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1850 18993..19070 +
1622815771.2024848-CDS-L-elsbetiae_contig1850:19377..194151622815771.2024848-CDS-L-elsbetiae_contig1850:19377..19415Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1850 19378..19415 +
1691683091.6204164-CDS-L-elsbetiae_contig1850:19377..194151691683091.6204164-CDS-L-elsbetiae_contig1850:19377..19415Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1850 19378..19415 +
1622815771.2190769-CDS-L-elsbetiae_contig1850:19775..198541622815771.2190769-CDS-L-elsbetiae_contig1850:19775..19854Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1850 19776..19854 +
1691683091.6312587-CDS-L-elsbetiae_contig1850:19775..198541691683091.6312587-CDS-L-elsbetiae_contig1850:19775..19854Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1850 19776..19854 +
1622815771.2314765-CDS-L-elsbetiae_contig1850:20224..202871622815771.2314765-CDS-L-elsbetiae_contig1850:20224..20287Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1850 20225..20287 +
1691683091.6422865-CDS-L-elsbetiae_contig1850:20224..202871691683091.6422865-CDS-L-elsbetiae_contig1850:20224..20287Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1850 20225..20287 +
1622815771.2448277-CDS-L-elsbetiae_contig1850:20628..207931622815771.2448277-CDS-L-elsbetiae_contig1850:20628..20793Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1850 20629..20793 +
1691683091.6532626-CDS-L-elsbetiae_contig1850:20628..207931691683091.6532626-CDS-L-elsbetiae_contig1850:20628..20793Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1850 20629..20793 +
1622815771.2564893-CDS-L-elsbetiae_contig1850:21001..211441622815771.2564893-CDS-L-elsbetiae_contig1850:21001..21144Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1850 21002..21144 +
1691683091.664911-CDS-L-elsbetiae_contig1850:21001..211441691683091.664911-CDS-L-elsbetiae_contig1850:21001..21144Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1850 21002..21144 +
1622815771.2683656-CDS-L-elsbetiae_contig1850:21525..217991622815771.2683656-CDS-L-elsbetiae_contig1850:21525..21799Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1850 21526..21799 +
1691683091.6751492-CDS-L-elsbetiae_contig1850:21525..217991691683091.6751492-CDS-L-elsbetiae_contig1850:21525..21799Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1850 21526..21799 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1850.5381.1

>prot_L-elsbetiae_contig1850.5381.1 ID=prot_L-elsbetiae_contig1850.5381.1|Name=mRNA_L-elsbetiae_contig1850.5381.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=280bp
MLDFIEVTVKTQLAIYNSLILAWREKIRHDAPRPPSVVRNEIGDEIVEAY
AGPDVGVQNITASEWEPFIRTMPHSEYPSASACTCEAFVNSMKVWAETDK
IDPPLEFPPPEFDRPVLTFSSWSEVSKMCGDSRVWGGMHFEGAVPAGAEL
CGGVDMPISVSASIDALVAGDASAAILNRDIGKLMIRPLSADTENNGDFS
DTSESGDDGDFFDANDSGDDGDLSDTSDSDTPTRVDGLEDSAAEDVSDDN
GAGACFSTGGFVWTTVTTSLLVISGNSLH*
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mRNA from alignment at L-elsbetiae_contig1850:16373..21834+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1850.5381.1 ID=mRNA_L-elsbetiae_contig1850.5381.1|Name=mRNA_L-elsbetiae_contig1850.5381.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5462bp|location=Sequence derived from alignment at L-elsbetiae_contig1850:16373..21834+ (Laminarionema elsbetiae ELsaHSoW15)
TCTCGAGGAGTCCAAGGGCGCCGCAGATGATCCGGTCAGGCAGTTCGCGA
TATCATTCTTCGATAACAAGTTTAACTCTCTGGTGCCGCTCAAGATCACG
TACTTCCTGGGGTAAGCTGGCCTCCACAAGTGCGCTCTCACCCTTGACAT
ACTTGATGGGACAAGAGTCCGCGAAACACTGGCTCAACACCGCTGGCATG
ATTCGAGAATGTAGACGACTGGAAACGCGAAGAAGTTTGATGGCCCGTTA
GAAACGTGAAGGCCCAGTTCAGCAAGGGAGCTCGTGATCACAAAATGTTC
CCCGCAAACTCCCTCCTGAATTATTGGTAGTAGGAGAAGAGACAGGGCCT
CCCCACCAAAAGGCCGGACTAACAAGATCCCGCCCCTTCGTTGTGCTGCT
ATTATTGTGGGCACCACATTTTAGATACTTTATCGTTGGGATTCGTGGGG
GTAACGTTGATGGTCTAGGGGGTTTCGCGTGCAAGAATAGGAAAAGACGT
TATAAGGTTTAAGAAAAAAAATAATGTAAAACCCTAACCCAACATTCCAC
TTCGCGGCTCTCGGGGGGGGGGAAAGCCCCGACACTGGACTGTGACCAAG
CATTCCACTTCGTACTACTACTGTTGTGACCCAACATTCCACTTCGTACT
CTGATCAGGCAATCCACCGGGTGAAGAGGTGACACACATGGACTGAGACC
TCGCACCCTGCACGTAGGGTTCCGGAGCCAAAGGTCCAACACTCGTAGAG
TGTCACACACGAAGATACACCGTTCAAAAAGACTGAAGGCTGTGAATAAG
CATTCCTTTCGAAAACATGCCAAGATCCTACGAGCGACAGCGAACCACTA
ACGTCCTGTGATTGAGCATTACTCTTCTTTCGAAAACATGCCAAGATCCT
ACGAGCGACAGCGAGCCACCAACAACGTCCTGTGATTCAACATTCCTCTT
CTTCGCTGATTCAAAATCCCGCTGGGTAAACAAACGCATACTTAGGTATG
GTTTTTTCCTAAATGCAATAAAACGCACCGCTATAAGAAGGGGAAGGTGG
GTGCTGTGAGATATTCACTTTGTTTTTGCGGCCAAGTTGTACACGGAAAC
AACTACACAGTCCCCTGGTGAAAACCGATCCCACATTTTGAAGTATAAGC
AAGATAGAAAGGTTCAAGAGAGTGGAAAAGATTCAAAGGAATACTATGCA
TAAATTCGGTTTGAAATCGAGTACGGTCTCGAAGCATTGTAGCGCGAAAA
GGCCGCAATGCAGATAATCAGCGTAGACTAATGCCTTTTCGTAAATATGT
TTCGCGCTTCGTTCGAAGTAACTTATTTCTCCCAGGTAGACCCTTACCCA
ATAAATTGGAGCTAAGAGGGGTGATAAAATCATCACTTGTAGAGAACACC
TGCATTATTAATGGCAGGGACGTGTGCGTTAGTGTAGCTATATCTCTCGA
TATAGAGGTACATACGTGGCAAACCACACACACACGATGAGAAATAATAT
GCAGGTACCGTCGCACATGTGAGTAGCTTTCGCACAGATGATCACGACAA
GTCGACGGCATGAGGAGGAGGTCATGCGATGGCTAAGTCGCACAGTTTGC
GACATATCCGCGCAAGACGTTTTAATGCAATATAAAACAAGTACATACAC
GTGCTCGTCGTTTGGGTCAGAGGTCATTCGGAAGTACCGTCGTCCACTAT
CCATGCAAGTCCATCCAGAAGAACTCTACGCTATGCCATTTTTGGTGGCA
ACTAAATGTCGAGTCATAGAGCCGTAGAAGAGGTGGTCGTGGCATCTTGG
GCAACTACGTGATGTACAGCGCGATAATTCTATGTGGTGAGATGTACGAA
TGGTTTTCAAACGCGTCAAGTTGACGGGAGCATTTATTTGTGTCCGGATA
TATTATGCTGCTTGCTGCAAATGTCGGGGGTGTTGTCAACATGTGCAGCA
CCACGATGTGCGTAGAAAGAAAATGGGGATAAAATAACAAAACTATTTGT
TTTTGGAAAATTTATTACTGTTTGTGCAGGACGAAGGTGCTGTGCGCTAA
GCCCTAAGTGCGATGATGGACTAGTTGTAGCCAAAGAGAGCCATATACTC
GATAATACAACATGAAAATAGTGGAAGAGCCGTATGCAAAGCAGCTATAT
TTTGCGGAAAAAAACAAAATAAAACGAAAAGAAATATCATTTCAAAAACA
AATCTTGATGTGCGTCGTAAGACAACGTGTCTGTAAGTAGTATAATGACA
TGATCAGGCGACGGTACCTGATTCATCTGCATCACGCTCCTCAGTACAAA
ATATCGTAACAACTACTTCGAAGTGCCGTACAACAGGCATGGCCTATCTA
TAGTCTACGTCTAATAATAAGTGTATTTCCGTGACAAATGTCGCGCTTTC
TTGGACAACCGCGTTGATTCCATTCGATGGCAACAAGCTATGAACATGTG
GCAGGCGATCCGACACCCTGTCGATACTGGACTTTATCGAGATTGCGGTC
AAGACGCAGCTGACAATGTACAACATCCTTGCATGGCATGATCTTGGACA
ACCGCGTTGATTCCATTCTATGGAAACAAACTATGCACATGCATGTGGCA
GGCGATCCGACACCCTGTCGATGCTGGACTTTATCGAGGTTACGGTCAAG
ACGCAGCTGGCAATTTACAACTCGCTCATCCTTGCATGGCGCGAAAAGGT
ATATCTAGACAAGCAGAAATTGTATCTAATTGTTTAAGGCAGGAAATTTC
GCTTCCCGGCAGCACACAGAAAGATCACTGTGCTCGCCATGGGGAGGGGT
GAGAGAGAGAGGTTACACAGGACTGGAACCTCTACACAAGCCCGGTTGTG
TTGGCCCTGATGTGGCCTTTGTGTCGATGTGGCTTTTGTGTCGTTTCTTT
CGGATATTACCGTCGTTGCGTCGCCCCTTACGTTTGGGCACTAGTGAATT
TGGGTGAAAGTTATATCCACAACATCATTGCGCGTGCCACTTGCTGCCCG
TTCAGATCCGCCACGATGCCCCACGCCCCCCTTCAGTGGTCAGGTGAGCC
AGTTAGCATTGAAATTTGGCTATTTCCGTCAAGAAAACGTCGACATAATT
CAAAAACACACATACATGTCATTGGGGGGCCAACAGTCTCCGTTTTTTTT
TCACGAGCTGTAGCTTTGTGAAACCTCGAGTGTTTTGGAGGATATCGGTC
TGTCTGGCAAATTCGGGTTCGCTTCACCCAAGATGACAGGATGTCTTCAT
GTTCATGGAAATCTCATTTCTAACACCATCGGTTATCCATCCTTCTACAT
CGTGTTCGGGCCAAAGCCGATGGTCACAACGCGACGTACGGCTACTACAG
TGATAGGAGTATGCGTTTCTGACACACGTCTCAAACCTTCTCTGAACGGC
CAGGAACGAGATCGGAGACGAGATTGTCGAGGCCTACGCGGGTCCCGATG
TCGGTGTGCAGAACATCACGGCCTCTGAATGGGTATGCATGTCGTTCGAG
GTTTCACTTGTTTTTCATATTTGACATCATTCCTGCCCCGGATGGTAGTA
GATTGCCATGTATGTGCCGGCCAGCCGTGGTGTGGCGTTTTCGGTGGGGC
ATGTGCACACAAATGCACATTAATGAATGGGACTGATGGCGCGTGTGAAA
ATTCGAAGCTTTCACCCGTTACATGTACGTGCATGGCCCGAAATATTCTA
GGGCCGTGCCTGTGTGCTACACAGTAGTGAAACTTGGATTGCGAATATAT
TTCACTCTCTCGTTTTATGCTGCATCATATGGTGTCACGGATGCAACTCA
CTGACGTAAAGTCTGATGGCTTCTCCGCGCTGGTATGGGTCCCTCCCTTC
AGGAGCCCTTCATCCGCACCATGCCGCACTCTGAGTACCCATCGGCCTCT
GCTTGTACGTGTGAGGTGAGCGATTCTATGGCGTTTAGACACGGTTTGGA
GAAGAGTGACGCGTTTGTGCTCAGCGGGCGTAGTTTTTTTTCCAACGTTA
AAGACATCATAAGCATGACTATGTACCAGATTTTACCGCTCGACGAAGCT
ATGATGAAACCAGCCTCGTGACAGACTCCTGTCAAGGGAACATGCAATAT
GTTCGTATGTTCCGAGAAACCTGGCGGAGACGCTTGCACTTGATACTATC
TTCCCTGAATGCCCATCGTCACTCTGTTGACTCGAGTCACTTCCGTCAGG
CTCTTTACAGCGGCTGCACTCTCCCTGAGATCATCCTTGCTTCTGTTGCG
TTTCAGGCGTTTGTAAACTCGATGAAGGTATGGGCTGAGACGGACAAGAT
CGACCCCCCCCTCGAGTTTCCCCCGCCCGAGTTTGATAGACCAGTCCTAA
CGTTCTCCAGCTGGAGCGAGGTTTCGAAGATGTGCGGTGACAGCCGAGTG
TGGGGTGGGATGCACTTTGAGGTCAGTGGGTTGCATTGAAGGCTCCTTTT
GTGAAAGTCTATGGCACAAATTTTCCCGACACCCCTTCCGTTTTCTTACA
CAAGAACTGTTCCTGCGCCACAATCACCACGGACACGTGGACTTTATCGG
GAATTATTTTAACAATTAATCGTTCTGGTTGGGTTGCATGTCCTGCCGCG
TTATTGGTTGACAATTCTCGATACTTCAGGGAGCTGTTCCAGCCGGAGCC
GAGCTTTGCGGTGGCGTTGATATGCCCATATCTGTCTCCGCTTCGATCGA
CGCGTTAGTCGCTGGTGACGCGTCAGCCGCTATTTTGAACCGTGACATCG
GCAAGCTCATGATTCGCCCCCTGTAAGGATCGACGTCATCAGGAGGAGAT
CTAGGCCTCAAGCCACCATCAACCCTCTGTATCATATACCGTAACCTCTG
ATGCTTCTTGTTTTGTTGTTAATATATGGACGCTTACTGCAACCAAACAG
CATGCTATCCACATCGTGCCTTCGCCGCCTTGTAATGTGTATCTCAAACG
CGGCTTCGAGGTATTTTCTCCACCCCCTCTTTAAATGGAACTGCCTTTCG
GCCGACTATTTTGAATGCAATTGTTGTAACAGTTGACTTTCAACGTTTGA
ATGCTTTTCGAAAGAAATGTTTGCAGCAGAAATAACACCGTTGGCATATG
TGAACCTGGACTTATACCCCGGCCGACACCGCCGTCGGTACGTTTATCTG
CAGCTCGGCGGACACGGAGAATAACGGTGATTTCTCGGACACGAGCGAGT
CTGGTGATGACGGCGACTTTTTCGACGCGAACGACTCCGGTGATGACGGC
GACCTCTCCGACACGAGCGACTCCGACACTCCCACTAGGGTGGACGGACT
GGAGGACTCTGCGGCTGAAGACGTTTCCGATGACAACGGGGCAGGCGCGT
GCTTCTCTACAGGAGGGTTCGTCTGGACCACCGTTACGACGAGTTTGCTC
GTCATCAGCGGAAATAGTCTGCACTGATCTCCGCTCCTACCGCGTCATGT
TAAACGGCCACC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1850:16373..21834+

>mRNA_L-elsbetiae_contig1850.5381.1 ID=mRNA_L-elsbetiae_contig1850.5381.1|Name=mRNA_L-elsbetiae_contig1850.5381.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1680bp|location=Sequence derived from alignment at L-elsbetiae_contig1850:16373..21834+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCTGGACTTTATCGAGGTTACGGTCAAGACGCAGCTGGCAATTTACAA
CTCGCTCATCCTTGCATGGCGCGAAAAGATGCTGGACTTTATCGAGGTTA
CGGTCAAGACGCAGCTGGCAATTTACAACTCGCTCATCCTTGCATGGCGC
GAAAAGATCCGCCACGATGCCCCACGCCCCCCTTCAGTGGTCAGATCCGC
CACGATGCCCCACGCCCCCCTTCAGTGGTCAGGAACGAGATCGGAGACGA
GATTGTCGAGGCCTACGCGGGTCCCGATGTCGGTGTGCAGAACATCACGG
CCTCTGAATGGGAACGAGATCGGAGACGAGATTGTCGAGGCCTACGCGGG
TCCCGATGTCGGTGTGCAGAACATCACGGCCTCTGAATGGGAGCCCTTCA
TCCGCACCATGCCGCACTCTGAGTACCCATCGGCCTCTGCTTGTACGTGT
GAGGAGCCCTTCATCCGCACCATGCCGCACTCTGAGTACCCATCGGCCTC
TGCTTGTACGTGTGAGGCGTTTGTAAACTCGATGAAGGTATGGGCTGAGA
CGGACAAGATCGACCCCCCCCTCGAGTTTCCCCCGCCCGAGTTTGATAGA
CCAGTCCTAACGTTCTCCAGCTGGAGCGAGGTTTCGAAGATGTGCGGTGA
CAGCCGAGTGTGGGGTGGGATGCACTTTGAGGCGTTTGTAAACTCGATGA
AGGTATGGGCTGAGACGGACAAGATCGACCCCCCCCTCGAGTTTCCCCCG
CCCGAGTTTGATAGACCAGTCCTAACGTTCTCCAGCTGGAGCGAGGTTTC
GAAGATGTGCGGTGACAGCCGAGTGTGGGGTGGGATGCACTTTGAGGGAG
CTGTTCCAGCCGGAGCCGAGCTTTGCGGTGGCGTTGATATGCCCATATCT
GTCTCCGCTTCGATCGACGCGTTAGTCGCTGGTGACGCGTCAGCCGCTAT
TTTGAACCGTGACATCGGCAAGCTCATGATTCGCCCCCTGGAGCTGTTCC
AGCCGGAGCCGAGCTTTGCGGTGGCGTTGATATGCCCATATCTGTCTCCG
CTTCGATCGACGCGTTAGTCGCTGGTGACGCGTCAGCCGCTATTTTGAAC
CGTGACATCGGCAAGCTCATGATTCGCCCCCTCTCGGCGGACACGGAGAA
TAACGGTGATTTCTCGGACACGAGCGAGTCTGGTGATGACGGCGACTTTT
TCGACGCGAACGACTCCGGTGATGACGGCGACCTCTCCGACACGAGCGAC
TCCGACACTCCCACTAGGGTGGACGGACTGGAGGACTCTGCGGCTGAAGA
CGTTTCCGATGACAACGGGGCAGGCGCGTGCTTCTCTACAGGAGGGTTCG
TCTGGACCACCGTTACGACGAGTTTGCTCGTCATCAGCGGAAATAGTCTG
CACTGACTCGGCGGACACGGAGAATAACGGTGATTTCTCGGACACGAGCG
AGTCTGGTGATGACGGCGACTTTTTCGACGCGAACGACTCCGGTGATGAC
GGCGACCTCTCCGACACGAGCGACTCCGACACTCCCACTAGGGTGGACGG
ACTGGAGGACTCTGCGGCTGAAGACGTTTCCGATGACAACGGGGCAGGCG
CGTGCTTCTCTACAGGAGGGTTCGTCTGGACCACCGTTACGACGAGTTTG
CTCGTCATCAGCGGAAATAGTCTGCACTGA
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