mRNA_L-elsbetiae_contig18454.5363.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig18454.5363.1 vs. uniprot
Match: D7G4Q7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Q7_ECTSI) HSP 1 Score: 137 bits (344), Expect = 1.050e-35 Identity = 63/80 (78.75%), Postives = 73/80 (91.25%), Query Frame = 1 Query: 1 PKNPKVVSDMTSLHHIHEAGILFNLAERTKFKDQRPYTFMGTILIAVNPLQRVSDPEMSEYVNRPLNPETPHPYAIAEVS 240 P NPKVVSDMT+LHHIHEAGIL+NL ER K +QRPYTFMGTILIAVNPL++V+DPEMS+Y+NR L+PE PHPYAIAE+S Sbjct: 77 PHNPKVVSDMTALHHIHEAGILYNLGERAKLDNQRPYTFMGTILIAVNPLRKVADPEMSKYMNRSLDPEAPHPYAIAELS 156
BLAST of mRNA_L-elsbetiae_contig18454.5363.1 vs. uniprot
Match: D7FPQ0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPQ0_ECTSI) HSP 1 Score: 136 bits (343), Expect = 1.430e-35 Identity = 63/80 (78.75%), Postives = 74/80 (92.50%), Query Frame = 1 Query: 1 PKNPKVVSDMTSLHHIHEAGILFNLAERTKFKDQRPYTFMGTILIAVNPLQRVSDPEMSEYVNRPLNPETPHPYAIAEVS 240 P NPKVV+DMTSLHHIHEAGIL NL ER+K +DQRPYTFMGTILIAVNPL+RV +PEM++Y++R LNPETPHPYAIAE++ Sbjct: 55 PPNPKVVADMTSLHHIHEAGILHNLRERSKLQDQRPYTFMGTILIAVNPLRRVPNPEMTDYMDRSLNPETPHPYAIAELA 134
BLAST of mRNA_L-elsbetiae_contig18454.5363.1 vs. uniprot
Match: D8LHQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ0_ECTSI) HSP 1 Score: 133 bits (335), Expect = 1.720e-34 Identity = 61/78 (78.21%), Postives = 72/78 (92.31%), Query Frame = 1 Query: 7 NPKVVSDMTSLHHIHEAGILFNLAERTKFKDQRPYTFMGTILIAVNPLQRVSDPEMSEYVNRPLNPETPHPYAIAEVS 240 NPKVVSDMTSLHHIHEAGIL+NL ER+K + QRPYTFMGTILIAVNPL+R+ DP++SEY+NR L+PE PHPYAIAE++ Sbjct: 73 NPKVVSDMTSLHHIHEAGILYNLRERSKLEGQRPYTFMGTILIAVNPLRRIPDPDVSEYMNRSLDPEAPHPYAIAELA 150
BLAST of mRNA_L-elsbetiae_contig18454.5363.1 vs. uniprot
Match: D8LMW4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW4_ECTSI) HSP 1 Score: 133 bits (334), Expect = 2.340e-34 Identity = 60/80 (75.00%), Postives = 70/80 (87.50%), Query Frame = 1 Query: 1 PKNPKVVSDMTSLHHIHEAGILFNLAERTKFKDQRPYTFMGTILIAVNPLQRVSDPEMSEYVNRPLNPETPHPYAIAEVS 240 P NPKVV+DMTSLHHIHEAGIL NL +R + KDQ+ YTFMGT+LIAVNPL+R+ DP M ++NRPLNPETPHPYAIAE+S Sbjct: 61 PHNPKVVADMTSLHHIHEAGILHNLGQRAQIKDQKAYTFMGTVLIAVNPLRRLEDPPMESFMNRPLNPETPHPYAIAELS 140
BLAST of mRNA_L-elsbetiae_contig18454.5363.1 vs. uniprot
Match: A0A6H5JRA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA1_9PHAE) HSP 1 Score: 131 bits (329), Expect = 1.110e-33 Identity = 60/80 (75.00%), Postives = 71/80 (88.75%), Query Frame = 1 Query: 1 PKNPKVVSDMTSLHHIHEAGILFNLAERTKFKDQRPYTFMGTILIAVNPLQRVSDPEMSEYVNRPLNPETPHPYAIAEVS 240 P NP+VV DMTSLHHIHEAGIL NL ER+K ++QRPYTFMGTILIAVNPLQRV P+M +Y+++ LNPETPHPYAIAE++ Sbjct: 69 PTNPRVVPDMTSLHHIHEAGILHNLRERSKLRNQRPYTFMGTILIAVNPLQRVPSPDMRDYMDKSLNPETPHPYAIAELA 148
BLAST of mRNA_L-elsbetiae_contig18454.5363.1 vs. uniprot
Match: D8LMS5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMS5_ECTSI) HSP 1 Score: 131 bits (329), Expect = 1.110e-33 Identity = 60/80 (75.00%), Postives = 71/80 (88.75%), Query Frame = 1 Query: 1 PKNPKVVSDMTSLHHIHEAGILFNLAERTKFKDQRPYTFMGTILIAVNPLQRVSDPEMSEYVNRPLNPETPHPYAIAEVS 240 P NP+VV DMTSLHHIHEAGIL NL ER+K ++QRPYTFMGTILIAVNPLQRV P+M +Y+++ LNPETPHPYAIAE++ Sbjct: 69 PTNPRVVPDMTSLHHIHEAGILHNLRERSKLRNQRPYTFMGTILIAVNPLQRVPSPDMRDYMDKSLNPETPHPYAIAELA 148
BLAST of mRNA_L-elsbetiae_contig18454.5363.1 vs. uniprot
Match: A0A6H5JUQ2_9PHAE (Myosin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUQ2_9PHAE) HSP 1 Score: 120 bits (302), Expect = 8.920e-31 Identity = 62/104 (59.62%), Postives = 72/104 (69.23%), Query Frame = 1 Query: 7 NPKVVSDMTSLHHIHEAGILFNLAERTKFKDQRPYTFM--------------------------GTILIAVNPLQRVSDPEMSEYVNRPLNPETPHPYAIAEVS 240 NPKVVSDMTSLHHIHEAGIL+NL ER+K + QRPYTFM GTILIAVNPL+R+ DP++SEY+NR L+PE PHPYAIAEV+ Sbjct: 28 NPKVVSDMTSLHHIHEAGILYNLRERSKLESQRPYTFMKAVVLYLQRHASSAVLSPPRHRRFCQGTILIAVNPLRRIPDPDVSEYMNRSLDPEAPHPYAIAEVT 131
BLAST of mRNA_L-elsbetiae_contig18454.5363.1 vs. uniprot
Match: A0A836C7J1_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7J1_9STRA) HSP 1 Score: 113 bits (282), Expect = 2.450e-27 Identity = 53/80 (66.25%), Postives = 64/80 (80.00%), Query Frame = 1 Query: 1 PKNPKVVSDMTSLHHIHEAGILFNLAERTKFKDQRPYTFMGTILIAVNPLQRVSDPEMSEYVNRPLNPETPHPYAIAEVS 240 P+NPKVV+DMT+L HI+E GIL NL R+ +DQRPYTFMGT+LI VNPLQ V DP M YV + L+PE PHPYAIAE++ Sbjct: 77 PQNPKVVADMTALFHINEPGILHNLRVRSDLRDQRPYTFMGTLLICVNPLQVVPDPPMETYVGQQLDPEAPHPYAIAELA 156
BLAST of mRNA_L-elsbetiae_contig18454.5363.1 vs. uniprot
Match: A0A836C8E2_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8E2_9STRA) HSP 1 Score: 110 bits (275), Expect = 2.170e-26 Identity = 51/79 (64.56%), Postives = 66/79 (83.54%), Query Frame = 1 Query: 4 KNPKVVSDMTSLHHIHEAGILFNLAERTKFKDQRPYTFMGTILIAVNPLQRVSDPEMSEYVNRPLNPETPHPYAIAEVS 240 +NPKVV+DMT+LHHI+E GIL NL R+ ++QRPYT+MGTILI VNPL+ V DP MSE+++ L+PE PHPYAIAE++ Sbjct: 62 QNPKVVADMTALHHINEPGILHNLRVRSDLRNQRPYTYMGTILICVNPLRTVPDPPMSEFLDVSLDPEKPHPYAIAELA 140
BLAST of mRNA_L-elsbetiae_contig18454.5363.1 vs. uniprot
Match: A0A6H5LIB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIB2_9PHAE) HSP 1 Score: 110 bits (275), Expect = 2.180e-26 Identity = 52/80 (65.00%), Postives = 65/80 (81.25%), Query Frame = 1 Query: 1 PKNPKVVSDMTSLHHIHEAGILFNLAERTKFKDQRPYTFMGTILIAVNPLQRVSDPEMSEYVNRPLNPETPHPYAIAEVS 240 PKN VV+DMT+LHHIHEAGIL NL ER++ Q PYT+MGTIL+AVNPL+ V P + +++NR L+PE PHPYAIAE+S Sbjct: 3 PKNHSVVADMTALHHIHEAGILHNLKERSRPWRQTPYTWMGTILLAVNPLKAVPQPPIEDFMNRSLDPERPHPYAIAELS 82 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18454.5363.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig18454.5363.1 >prot_L-elsbetiae_contig18454.5363.1 ID=prot_L-elsbetiae_contig18454.5363.1|Name=mRNA_L-elsbetiae_contig18454.5363.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=73bp MTSLHHIHEAGILFNLAERTKFKDQRPYTFMGTILIAVNPLQRVSDPEMSback to top mRNA from alignment at L-elsbetiae_contig18454:509..1124- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig18454.5363.1 ID=mRNA_L-elsbetiae_contig18454.5363.1|Name=mRNA_L-elsbetiae_contig18454.5363.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=616bp|location=Sequence derived from alignment at L-elsbetiae_contig18454:509..1124- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig18454:509..1124- >mRNA_L-elsbetiae_contig18454.5363.1 ID=mRNA_L-elsbetiae_contig18454.5363.1|Name=mRNA_L-elsbetiae_contig18454.5363.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=438bp|location=Sequence derived from alignment at L-elsbetiae_contig18454:509..1124- (Laminarionema elsbetiae ELsaHSoW15)back to top |