mRNA_L-elsbetiae_contig18425.5348.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig18425.5348.1
Unique NamemRNA_L-elsbetiae_contig18425.5348.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig18425.5348.1 vs. uniprot
Match: A0A6H5KU21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU21_9PHAE)

HSP 1 Score: 268 bits (684), Expect = 9.120e-84
Identity = 128/173 (73.99%), Postives = 146/173 (84.39%), Query Frame = 1
Query:    1 KQVWVRGGLLLLCGDGPGRSKCLGAKGPNNFSTHPCPYCMVKQVDDDTGGDLGNPQYDIDENKRTWGQINDGFSELEALADNSSAQTERSKALGLVPPDASGLPLPLYNAMRVVPTEHVPVERLHFDALGQCQLCQVFCLELLSTKGRRFVSAIMSQKPSLLYPPGTENSSKI 519
            ++V+VRGGLLL+CGDG GRSK LG K PN++S HPC YCMV Q DDDTGGDLGNP++DID+++RTWGQI DG SEL+ALAD    Q  RS+ LGLVPPDASGLPLPLY AMR+VPTE+VPVERLHFDALGQ QLCQVF LE+LST GRR VSAIM+QKPSLLYPPGT     +
Sbjct:  177 QEVFVRGGLLLMCGDGQGRSKFLGTKAPNSWSKHPCAYCMVSQRDDDTGGDLGNPRFDIDKHRRTWGQITDGLSELDALADVPREQDRRSRDLGLVPPDASGLPLPLYTAMRIVPTENVPVERLHFDALGQSQLCQVFFLEMLSTTGRRLVSAIMAQKPSLLYPPGTRKLKDV 349          
BLAST of mRNA_L-elsbetiae_contig18425.5348.1 vs. uniprot
Match: A0A6H5KQX1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQX1_9PHAE)

HSP 1 Score: 268 bits (684), Expect = 5.360e-82
Identity = 128/173 (73.99%), Postives = 146/173 (84.39%), Query Frame = 1
Query:    1 KQVWVRGGLLLLCGDGPGRSKCLGAKGPNNFSTHPCPYCMVKQVDDDTGGDLGNPQYDIDENKRTWGQINDGFSELEALADNSSAQTERSKALGLVPPDASGLPLPLYNAMRVVPTEHVPVERLHFDALGQCQLCQVFCLELLSTKGRRFVSAIMSQKPSLLYPPGTENSSKI 519
            ++V+VRGGLLL+CGDG GRSK LG K PN++S HPC YCMV Q DDDTGGDLGNP++DID+++RTWGQI DG SEL+ALAD    Q  RS+ LGLVPPDASGLPLPLY AMR+VPTE+VPVERLHFDALGQ QLCQVF LE+LST GRR VSAIM+QKPSLLYPPGT     +
Sbjct:  321 QEVFVRGGLLLMCGDGQGRSKFLGTKAPNSWSKHPCAYCMVSQRDDDTGGDLGNPRFDIDKHRRTWGQITDGLSELDALADVPREQDRRSRDLGLVPPDASGLPLPLYTAMRIVPTENVPVERLHFDALGQSQLCQVFFLEMLSTTGRRLVSAIMAQKPSLLYPPGTRKLKDV 493          
BLAST of mRNA_L-elsbetiae_contig18425.5348.1 vs. uniprot
Match: A0A6H5KLQ7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLQ7_9PHAE)

HSP 1 Score: 269 bits (687), Expect = 1.760e-80
Identity = 129/173 (74.57%), Postives = 147/173 (84.97%), Query Frame = 1
Query:    1 KQVWVRGGLLLLCGDGPGRSKCLGAKGPNNFSTHPCPYCMVKQVDDDTGGDLGNPQYDIDENKRTWGQINDGFSELEALADNSSAQTERSKALGLVPPDASGLPLPLYNAMRVVPTEHVPVERLHFDALGQCQLCQVFCLELLSTKGRRFVSAIMSQKPSLLYPPGTENSSKI 519
            ++V+VRGGLLL+CGDGPGRSKCLG K PNNFS  PC YCMV   DD+TGGD+GNPQ+DID+++RT G+  DGFSELEALAD+   Q ERSK LGLV P+ASGL LPLY+AMR+VP +HVPVERLHFDALGQCQLCQVFCLELLS KGRR VSAIM+QK SLLYPPGT+    I
Sbjct:  129 EEVFVRGGLLLMCGDGPGRSKCLGTKAPNNFSKFPCSYCMVSHGDDETGGDVGNPQFDIDKHRRTSGRTMDGFSELEALADDPLQQEERSKELGLVAPNASGLKLPLYHAMRIVPGDHVPVERLHFDALGQCQLCQVFCLELLSKKGRRLVSAIMAQKSSLLYPPGTDKLKDI 301          
BLAST of mRNA_L-elsbetiae_contig18425.5348.1 vs. uniprot
Match: A0A6H5KJM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJM6_9PHAE)

HSP 1 Score: 263 bits (672), Expect = 1.610e-77
Identity = 126/173 (72.83%), Postives = 145/173 (83.82%), Query Frame = 1
Query:    1 KQVWVRGGLLLLCGDGPGRSKCLGAKGPNNFSTHPCPYCMVKQVDDDTGGDLGNPQYDIDENKRTWGQINDGFSELEALADNSSAQTERSKALGLVPPDASGLPLPLYNAMRVVPTEHVPVERLHFDALGQCQLCQVFCLELLSTKGRRFVSAIMSQKPSLLYPPGTENSSKI 519
            ++V+VRGGLLL+CGDG GRSK LG K PN++S HPC YCMV Q DDDTGGDLGNP++DID+++RTWGQI DG SEL+ALAD    Q  RS+ LGLVPPDASGLPLPLY AMR+VPTE+VPVERLHFDALGQ QLCQVF LE+LST GRR VSAIM+QKPSLL+ PGT     +
Sbjct:  668 QEVFVRGGLLLMCGDGQGRSKFLGTKAPNSWSKHPCAYCMVSQRDDDTGGDLGNPRFDIDKHRRTWGQITDGLSELDALADVPREQDRRSRDLGLVPPDASGLPLPLYTAMRIVPTENVPVERLHFDALGQSQLCQVFYLEMLSTTGRRLVSAIMAQKPSLLFQPGTRKLKDV 840          
BLAST of mRNA_L-elsbetiae_contig18425.5348.1 vs. uniprot
Match: A0A6H5KDY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDY2_9PHAE)

HSP 1 Score: 246 bits (627), Expect = 1.840e-77
Identity = 117/162 (72.22%), Postives = 133/162 (82.10%), Query Frame = 1
Query:   34 LCGDGPGRSKCLGAKGPNNFSTHPCPYCMVKQVDDDTGGDLGNPQYDIDENKRTWGQINDGFSELEALADNSSAQTERSKALGLVPPDASGLPLPLYNAMRVVPTEHVPVERLHFDALGQCQLCQVFCLELLSTKGRRFVSAIMSQKPSLLYPPGTENSSKI 519
            +CGDG GRSK LG K PN++S HPC YCMV Q DDDTGGDLGNP++DID+++RTWGQI DG S+L+ALAD    Q  RS+ LGLVPPD SGLPLPLY AMR+VPTE+VPVERLHFDALGQ Q CQVF LE+LST GRR VSAIM+QKPSLLYPPGT     +
Sbjct:    1 MCGDGQGRSKFLGTKAPNSWSKHPCAYCMVSQRDDDTGGDLGNPRFDIDKHRRTWGQITDGLSDLDALADVPREQDRRSRDLGLVPPDPSGLPLPLYTAMRIVPTENVPVERLHFDALGQSQFCQVFYLEMLSTTGRRLVSAIMAQKPSLLYPPGTRKLKDV 162          
BLAST of mRNA_L-elsbetiae_contig18425.5348.1 vs. uniprot
Match: D7G2D4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2D4_ECTSI)

HSP 1 Score: 245 bits (625), Expect = 2.360e-74
Identity = 116/168 (69.05%), Postives = 140/168 (83.33%), Query Frame = 1
Query:    1 KQVWVRGGLLLLCGDGPGRSKCLGAKGPNNFSTHPCPYCMVKQVDDDTGGDLGNPQYDIDENKRTWGQINDGFSELEALADNSSAQTERSKALGLVPPDASGLPLPLYNAMRVVPTEHVPVERLHFDALGQCQLCQVFCLELLSTKGRRFVSAIMSQKPSLLYPPGTE 504
            ++V+VRGGLL+ CGDGPGR+K LG+K  N+FS  PCPYCMV+Q DD  GGDLG+ QYD+D N+RTWG I +GF+ L++L+D+ S Q+ RS  LGLV PD +GLPLPLY+AM +VPTE VPVERLHFDALG CQLCQVF LE+LST+GRR VSA+MSQ PSLLYP GTE
Sbjct:  221 QEVFVRGGLLMWCGDGPGRAKNLGSKACNHFSRFPCPYCMVEQRDDAFGGDLGDAQYDLDANRRTWGGITEGFATLQSLSDDPSEQSRRSMELGLVAPDGTGLPLPLYDAMLIVPTEAVPVERLHFDALGSCQLCQVFLLEMLSTRGRRLVSAVMSQTPSLLYPAGTE 388          
BLAST of mRNA_L-elsbetiae_contig18425.5348.1 vs. uniprot
Match: A0A6H5K5N2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5N2_9PHAE)

HSP 1 Score: 248 bits (633), Expect = 2.790e-74
Identity = 119/162 (73.46%), Postives = 134/162 (82.72%), Query Frame = 1
Query:   34 LCGDGPGRSKCLGAKGPNNFSTHPCPYCMVKQVDDDTGGDLGNPQYDIDENKRTWGQINDGFSELEALADNSSAQTERSKALGLVPPDASGLPLPLYNAMRVVPTEHVPVERLHFDALGQCQLCQVFCLELLSTKGRRFVSAIMSQKPSLLYPPGTENSSKI 519
            +CGDG GRSK LG K PNN+S HPC YCMV Q DDDTGGDLGNP++DID+++RTWGQI +G SEL+ALAD    Q  RS+ LGLVPPDASGLPLPLY AMR+ PTE+VPVERLHFDALGQ QLCQVF LE+LST GRR VSAIM+QKPSLLYPPGT     +
Sbjct:    1 MCGDGQGRSKFLGTKPPNNWSKHPCAYCMVSQRDDDTGGDLGNPRFDIDKHRRTWGQITNGLSELDALADVPHEQDRRSRDLGLVPPDASGLPLPLYTAMRIAPTENVPVERLHFDALGQSQLCQVFFLEMLSTAGRRLVSAIMAQKPSLLYPPGTRKLKDV 162          
BLAST of mRNA_L-elsbetiae_contig18425.5348.1 vs. uniprot
Match: A0A6H5K9M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M0_9PHAE)

HSP 1 Score: 255 bits (651), Expect = 1.870e-73
Identity = 122/167 (73.05%), Postives = 140/167 (83.83%), Query Frame = 1
Query:    1 KQVWVRGGLLLLCGDGPGRSKCLGAKGPNNFSTHPCPYCMVKQVDDDTGGDLGNPQYDIDENKRTWGQINDGFSELEALADNSSAQTERSKALGLVPPDASGLPLPLYNAMRVVPTEHVPVERLHFDALGQCQLCQVFCLELLSTKGRRFVSAIMSQKPSLLYPPGT 501
            ++V+VRGGLLL+CGDG GRSK LG K PN++S HPC YCMV+Q  DDT GDLGNP++DID+++RTWGQI  GF EL  LAD+      RSK LGLV PDASGLPLPLY+AMRVVPTE+VPVERLHFDALGQ QLCQ+F LE+LST GRR V AIM+QKPSLLYPPGT
Sbjct:  697 QEVFVRGGLLLMCGDGQGRSKFLGTKAPNSWSRHPCAYCMVRQRTDDTSGDLGNPRFDIDKHRRTWGQITKGFEELHGLADDPRELERRSKELGLVEPDASGLPLPLYDAMRVVPTENVPVERLHFDALGQSQLCQIFFLEMLSTAGRRLVGAIMAQKPSLLYPPGT 863          
BLAST of mRNA_L-elsbetiae_contig18425.5348.1 vs. uniprot
Match: A0A6H5JYX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYX6_9PHAE)

HSP 1 Score: 252 bits (643), Expect = 1.020e-72
Identity = 123/178 (69.10%), Postives = 144/178 (80.90%), Query Frame = 1
Query:    1 KQVWVRGGLLLLCGDGPGRSKCLGAKGPNNFSTHPCPYCMVKQVDDDTGGDLGNPQYDIDENKRTWGQINDGFSELEALADNSSAQTERSKALGLV-----PPDASGLPLPLYNAMRVVPTEHVPVERLHFDALGQCQLCQVFCLELLSTKGRRFVSAIMSQKPSLLYPPGTENSSKI 519
            ++V+VRGGLLL+CGDG GRSK LG K PNN+S HPC YCM+ Q DDDTGGDLGNP++DID+++RTWGQI DG SEL+ALAD    Q  RS+ LG+      P +ASGLPLPL+ AMR+VPTE+VPVERLHFDALGQ QLCQVF LE+LST GRR VSAIM+QKPSLLYPPGT     +
Sbjct:  270 QEVFVRGGLLLMCGDGQGRSKFLGTKAPNNWSKHPCAYCMMSQRDDDTGGDLGNPRFDIDKHRRTWGQITDGLSELDALADVPHEQDRRSRDLGMRSTIKRPGNASGLPLPLFTAMRIVPTENVPVERLHFDALGQSQLCQVFFLEMLSTAGRRLVSAIMAQKPSLLYPPGTRKLKDV 447          
BLAST of mRNA_L-elsbetiae_contig18425.5348.1 vs. uniprot
Match: A0A6H5KJ80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ80_9PHAE)

HSP 1 Score: 223 bits (568), Expect = 1.340e-66
Identity = 113/167 (67.66%), Postives = 126/167 (75.45%), Query Frame = 1
Query:    1 KQVWVRGGLLLLCGDGPGRSKCLGAKGPNNFSTHPCPYCMVKQVDDDTGGDLGNPQYDIDENKRTWGQINDGFSELEALADNSSAQTERSKALGLVPPDASGLPLPLYNAMRVVPTEHVPVERLHFDALGQCQLCQVFCLELLSTKGRRFVSAIMSQKPSLLYPPGT 501
            ++V+VRGGLLL+CGDG GRSKCLG K PNN S  PC YCM                     ++RTWG+  DGFSELEALAD+   Q ERSK LGLV P+ASGL LPLY+AMR+VP +HVPVERLHFDALGQCQLCQVFCLELLS KGRR VSAIM+QK SLLYPPGT
Sbjct:  129 EEVFVRGGLLLMCGDGRGRSKCLGTKAPNNCSKFPCSYCM---------------------HRRTWGRTMDGFSELEALADDPLQQEERSKELGLVAPNASGLKLPLYHAMRIVPGDHVPVERLHFDALGQCQLCQVFCLELLSKKGRRIVSAIMAQKSSLLYPPGT 274          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18425.5348.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KU21_9PHAE9.120e-8473.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQX1_9PHAE5.360e-8273.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLQ7_9PHAE1.760e-8074.57Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJM6_9PHAE1.610e-7772.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDY2_9PHAE1.840e-7772.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2D4_ECTSI2.360e-7469.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K5N2_9PHAE2.790e-7473.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9M0_9PHAE1.870e-7373.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYX6_9PHAE1.020e-7269.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJ80_9PHAE1.340e-6667.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig18425contigL-elsbetiae_contig18425:278..2379 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons4
Model size899
Cds size408
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig18425.5348.1prot_L-elsbetiae_contig18425.5348.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig18425 395..993 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815768.03812-UTR-L-elsbetiae_contig18425:277..3941622815768.03812-UTR-L-elsbetiae_contig18425:277..394Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig18425 278..394 +
1691683089.5364258-UTR-L-elsbetiae_contig18425:277..3941691683089.5364258-UTR-L-elsbetiae_contig18425:277..394Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig18425 278..394 +
1622815768.0771868-UTR-L-elsbetiae_contig18425:993..10881622815768.0771868-UTR-L-elsbetiae_contig18425:993..1088Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig18425 994..1088 +
1691683089.5646262-UTR-L-elsbetiae_contig18425:993..10881691683089.5646262-UTR-L-elsbetiae_contig18425:993..1088Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig18425 994..1088 +
1622815768.092028-UTR-L-elsbetiae_contig18425:1714..18941622815768.092028-UTR-L-elsbetiae_contig18425:1714..1894Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig18425 1715..1894 +
1691683089.5739768-UTR-L-elsbetiae_contig18425:1714..18941691683089.5739768-UTR-L-elsbetiae_contig18425:1714..1894Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig18425 1715..1894 +
1622815768.1078734-UTR-L-elsbetiae_contig18425:2280..23791622815768.1078734-UTR-L-elsbetiae_contig18425:2280..2379Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig18425 2281..2379 +
1691683089.582671-UTR-L-elsbetiae_contig18425:2280..23791691683089.582671-UTR-L-elsbetiae_contig18425:2280..2379Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig18425 2281..2379 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815768.0547676-CDS-L-elsbetiae_contig18425:394..6641622815768.0547676-CDS-L-elsbetiae_contig18425:394..664Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18425 395..664 +
1691683089.5459356-CDS-L-elsbetiae_contig18425:394..6641691683089.5459356-CDS-L-elsbetiae_contig18425:394..664Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18425 395..664 +
1622815768.0660088-CDS-L-elsbetiae_contig18425:855..9931622815768.0660088-CDS-L-elsbetiae_contig18425:855..993Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18425 856..993 +
1691683089.5557919-CDS-L-elsbetiae_contig18425:855..9931691683089.5557919-CDS-L-elsbetiae_contig18425:855..993Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18425 856..993 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig18425.5348.1

>prot_L-elsbetiae_contig18425.5348.1 ID=prot_L-elsbetiae_contig18425.5348.1|Name=mRNA_L-elsbetiae_contig18425.5348.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=136bp
MVKQVDDDTGGDLGNPQYDIDENKRTWGQINDGFSELEALADNSSAQTER
SKALGLVPPDASGLPLPLYNAMRVVPTEHVPVERLHFDALGQCQLCQVFC
LELLSTKGRRFVSAIMSQKPSLLYPPGTENSSKIS*
back to top

mRNA from alignment at L-elsbetiae_contig18425:278..2379+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig18425.5348.1 ID=mRNA_L-elsbetiae_contig18425.5348.1|Name=mRNA_L-elsbetiae_contig18425.5348.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2102bp|location=Sequence derived from alignment at L-elsbetiae_contig18425:278..2379+ (Laminarionema elsbetiae ELsaHSoW15)
AAGCAGGTTTGGGTGCGTGGGGGTCTCCTCCTGTTATGTGGTGATGGTCC GGGGCGGTCGAAATGCCTCGGAGCCAAAGGCCCAAACAACTTCTCCACGC ACCCGTGCCCCTACTGCATGGTTAAACAAGTCGACGATGATACCGGCGGT GACCTGGGAAATCCTCAGTACGACATCGACGAGAACAAGCGCACTTGGGG GCAAATAAATGACGGTTTCTCGGAACTAGAGGCCCTGGCAGACAATTCCA GTGCGCAGACCGAACGCTCCAAAGCGTTGGGTCTAGTTCCGCCCGACGCC TCCGGACTCCCGTTGCCCCTGTACAATGCCATGCGTGTTGTTCCGACCGA GCATGTTCCTGTCGAGCGGCTGCACTTCGATGCGCTTGTGAGTGCGTGTG ACAGTAATTGAATCGAGATGGAACCACACAAGCTGGAAGTTATAGATTCT GGGGGGAATGGGGTCGAGACGGTCGAATTCTCCCCATCAGGGACGACTAC CACTTGGCTAAATGCGCCGTTTTTTCCTTCCTTCGCGAAATTTGTTCCCA CAACCAAACCATTTTCCCATAACGGCAGGGTCAATGCCAGCTGTGTCAGG TCTTTTGCCTGGAGTTGCTGTCGACAAAAGGTCGCCGGTTTGTCTCAGCC ATCATGTCTCAGAAGCCATCTTTGCTGTACCCACCGGGGACGGAGAACAG CTCAAAGATATCGTGACCAACTACTCTTCCCTGACGGGCAGCGACAAGTG GACACTGCAATCGATCATGCCTCTGGTGTTCCGGATGGTTCTACAGAATG TTCCGACCATGGTGTGTGTTATTTTGTACTCCTGTATAATGTTTTGGCGA GGGATATGCGGTAGTTGCAGGTAACATGGAGGAGTTGAATCAACACAGGT GCCTCCATTTTTCTTCATGTATCACGACTCACGGAATTGTGGAAACATAT GTTTTGTTTCAGACAATATGGTCGGGGCGTCGATCTTCATGTTTTAAGTC TTTTGGGGTTTAACTATTTGTTGGGGTATGGTGTCGAGCTCAACGACCAC ATAATAAACTGCAAGCTGCCACATACTATCTGACACCTTTTGCCTCGGAC CTGTATACATACGTTCCAGTGTAAGTCGCACTATATATTTCGTGTTTTCT GGGCTGTGGCTCACACGGCCGCCGCCGTGCACACCCCATCTAAGAAGTGG TCACCGTTTACTTTTTTGCACAAAAGGTTTTGCACAGCGAAAAACAGCAG AACTGAATGACATAAGAGGGGCCGAAACATTTTTACAGCATGTTCGCGCT ATTCGAGCCGCTATTCCCGTATCCGTGTGGTCTGTTAAACGTGCCCCAAT ACGCGAGCTAACGGACGGTACAGGTCGATGTTCTACCCTCCGCTGCTGTC GTATCACTCCCGCCCGCCTTTCACGCTGACCTGCCAGAGGATAAACATGA AGAAAAGGGATATGAACGTCCTCAAAGCCGAGTGGGGAACGTACGAGATG GTGCTGGGCGCCCTGCGGAAGCTCATTCAAAATGTTTCTCTCCTGTCGTT CGCCGTCCGCGCGCCATCCTACACCGATTCGGAGCTAAAACAACTCGACC TACTCGCGCGCGACGTGGTACGTTTATTTTGCCCAGACGAATACACAAAA GTATTCCGCTTTGTGTTGTCAAAGTAATTCCTCGCGGCTAATGCCCGCAA GAGACACTTGAAACCTGCTTCGATCGACATAGACTATAGGATATGTTTCG ACGCCACACACACCCTGTAGCGTGCCAGTTGCCATCGTGCTGTACCCTCG CCCATGCACTTGTACGCGCGCCAGCGAAGCCCTTCCTCTATCCATGTCTT CCGGGCGTTCGGACAATGGATATCGTCCACTTAAGCATAGATGATGTAGT CAACCTGGCCGGAAAAAACAACCACCTGCAAATAAAGCCGTGACGAAACT AAATGGCGCTATTATTCCATATTGCCCCAAAACTACTGTTCCCGCGCAAT CAGGTCGGGGTATTCTCCCAGGTGCTGGGGAGGACGGGATCGAGGCCCAC GATACATTCCATTCTGCATACGATACAGGCGATTCGCCTGCACGGTGAGA AT
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig18425:278..2379+

>mRNA_L-elsbetiae_contig18425.5348.1 ID=mRNA_L-elsbetiae_contig18425.5348.1|Name=mRNA_L-elsbetiae_contig18425.5348.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=816bp|location=Sequence derived from alignment at L-elsbetiae_contig18425:278..2379+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGTTAAACAAGTCGACGATGATACCGGCGGTGACCTGGGAAATCCTCA
GTACGACATCGACGAGAACAAGCGCACTTGGGGGCAAATAAATGACGGTT
TCTCGGAACTAGAGGCCCTGGCAGACAATTCCAGTGCGCAGACCGAACGC
TCCAAAGCGTTGGGTCTAGTTCCGCCCGACGCCTCCGGACTCCCGTTGCC
CCTGTACAATGCCATGCGTGTTGTTCCGACCGAGCATGTTCCTGTCGAGC
GGCTGCACTTCGATGCGCTTATGGTTAAACAAGTCGACGATGATACCGGC
GGTGACCTGGGAAATCCTCAGTACGACATCGACGAGAACAAGCGCACTTG
GGGGCAAATAAATGACGGTTTCTCGGAACTAGAGGCCCTGGCAGACAATT
CCAGTGCGCAGACCGAACGCTCCAAAGCGTTGGGTCTAGTTCCGCCCGAC
GCCTCCGGACTCCCGTTGCCCCTGTACAATGCCATGCGTGTTGTTCCGAC
CGAGCATGTTCCTGTCGAGCGGCTGCACTTCGATGCGCTTGGTCAATGCC
AGCTGTGTCAGGTCTTTTGCCTGGAGTTGCTGTCGACAAAAGGTCGCCGG
TTTGTCTCAGCCATCATGTCTCAGAAGCCATCTTTGCTGTACCCACCGGG
GACGGAGAACAGCTCAAAGATATCGTGAGGTCAATGCCAGCTGTGTCAGG
TCTTTTGCCTGGAGTTGCTGTCGACAAAAGGTCGCCGGTTTGTCTCAGCC
ATCATGTCTCAGAAGCCATCTTTGCTGTACCCACCGGGGACGGAGAACAG
CTCAAAGATATCGTGA
back to top