mRNA_L-elsbetiae_contig18352.5322.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig18352.5322.1
Unique NamemRNA_L-elsbetiae_contig18352.5322.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig18352.5322.1 vs. uniprot
Match: A0A835SQR0_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835SQR0_9CHLO)

HSP 1 Score: 144 bits (362), Expect = 1.020e-34
Identity = 116/419 (27.68%), Postives = 188/419 (44.87%), Query Frame = 1
Query:   13 PLVNIIDSYDGEERFLAGVDTTGNKKDMPFLYTLLQKYIDE----HVDLVVSDGA--CAGLLAIIEAKHPSVTGMKCCAHGADLLLKDVGKLDFFADILKRINSIVKFVKNHHGTNAIYGSHTDLRLVTPCATRFATYVIVAMRM--LKATLKNFAADTRTAEYIRTTQQATVRKAGRDAVAEINQGDAMVGDFWFELEFYVQTMTPIYELLRMGDGLLPCMSKFLNGFINIPKTWDQIVKDQQTDTCAQEGEGWKDTVISERLVLLKEKAAKRLDYIWN--------PMMSAAFALDPEYRKVDLLNIKDGQILTDLDTMYKRLLISHGNDSAAAISAAADEPEGGPVGKAGSQFARYRS--GKWKGADLLGYASSMAPADWWENYGIGMPELAKVAMRVTSKVPASAGAERNWSLYG 1215
            PL+N +    GE +FL   +T G  KD  F Y ++ + I+E    HV +V +D A  C     ++E K+P +  + C +H  DL L+D+ KLD+   +    N+ VKF++NH    +++ SH+ L L+ P  TRF T VI+A R+  +K  L++   D     +      AT   + +     +N+        W  +   V    P  E++R+ D   P   K           W           C Q GE  K+   S     L +   + +  IW+        P+ +A + LDPE+   ++    +G       T+ +R+L                +PE     KA  Q + +R+  G +  A +L  A ++A  ++WE YG G+ EL +VA+RV S   ++   ERNWS YG
Sbjct:   61 PLINAMAVSGGEVQFLKAFNTEGATKDAAFYYRIMCEMIEEVGPQHVVMVATDNAPVCPAAGKMVEEKYPHIFWLPCTSHVMDLALEDLSKLDWVDGLTDSCNTAVKFIRNHQAPLSVFRSHSKLELLKPGETRFGTNVIMASRLEAVKEALQSTVVDAAFNSWRDRQSAATQATSNQVRRFLLNEQS------WERIGNLVLVSDPFMEIIRLADSQKPVAGKMF---------W----------RCHQAGEKLKEGAGSS----LSQAKIREVVRIWDTRYAQLSSPLYAAGYVLDPEFWDHNVSEAMEG-----FTTVVERML----------------DPEA--AAKAMVQLSAFRNKQGIFGRASVLTSAKTLAGHEFWEQYGGGVSELQRVAVRVLSMTASATSCERNWSTYG 427          
BLAST of mRNA_L-elsbetiae_contig18352.5322.1 vs. uniprot
Match: A0A1Y1IK20_KLENI (DUF659 domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IK20_KLENI)

HSP 1 Score: 121 bits (304), Expect = 1.740e-26
Identity = 92/295 (31.19%), Postives = 136/295 (46.10%), Query Frame = 1
Query:   13 PLVNIIDSYDGEERFLAGVDTTGNKKDMPF----LYTLLQKYIDEHVDLVVSDGA--CAGLLAIIEAKHPSVTGMKCCAHGADLLLKDVGKLDFFADILKRINSIVKFVKNHHGTNAIYGSHTDLRLVTPCATRFATYVIVAMRMLKATLKNFAADTRTAEYIRTTQQATVRKAGRDAVAEINQGDAMVGDFWFELEFYVQTMTPIYELLRMGDGLLPCMSKFLNGFINIPKTWDQIVKDQQTDTCAQEGEGWKDTVISERLVLLKEKAAKRLDYIWNPMMSAAFALDPEYRKVD 879
            PL+N++    G E F   +DT+G +K   +    L  +++K   ++V  VV D A  C      I A+ P +T   C AHG DL L+DVGK ++ +  LK    +VKF+ NHH T A++  H+DL L+ P  TRFAT  I   R+L+      A    T  +   T  A  +     A+AE  Q       FW E     Q   PI ++LR+ D   P   K    F                + C +E EG       +R VL  +   +R  ++ + ++ A + LDPE+RK D
Sbjct:  216 PLLNVLVITPGLEVFTTAIDTSGERKFGEYIAEQLIPVIEKIGPDNVVHVVMDNAANCKVAGRFITARFPWITCSGCVAHGMDLALEDVGKEEWVSPTLKAARDLVKFITNHHKTIALFRQHSDLELLKPGDTRFATSFITLERLLEVKDSLRA----TVGHPDWTSWAAAQAPATRALAEDIQELVFTAAFWKEASEIAQLSIPIVKVLRLADCPAPTSGKMYKAF----------------ERCREEIEGLDVNATKKRRVL--DIFEERRKFVLSDLLIAGYVLDPEFRKED 488          
BLAST of mRNA_L-elsbetiae_contig18352.5322.1 vs. uniprot
Match: A0A8B8M407_ABRPR (uncharacterized protein LOC113870053 n=1 Tax=Abrus precatorius TaxID=3816 RepID=A0A8B8M407_ABRPR)

HSP 1 Score: 111 bits (278), Expect = 8.350e-23
Identity = 105/410 (25.61%), Postives = 192/410 (46.83%), Query Frame = 1
Query:   16 LVNIIDSYDGEERFLAGVDTTGNKKDMPFLYTLLQKYIDE----HVDLVVSDGACAGLLA--IIEAKHPSVTGMKCCAHGADLLLKDVGKLDFFADILKRINSIVKFVKNHHGTNAIYGSHTD-LRLVTPCATRFATYVIVAMRM--LKATL-KNFAADTRTAEYIRTTQQATVRKAGRDAVAEINQGDAMVGDFWFELEFYVQTMTPIYELLRMGDG-LLPCMSKFLNGFINIPKTWDQIVKDQQTDTCAQEGEGWKDTVISERLVLLKEKAAKRLDYIWNPMMSAAFALDPEYRKVDLLNIKDGQILTDLDTMYKRLLISHGNDSAAAISAAADEPEGGPVGKAGSQFARYRSGKWKGADLLGYASSMAPADWWENYGIGMPELAKVAMRVTSKVPASAGAERNWSLY 1212
            L+N + +      F+  +D +   K    L+ LL  +++E    +V  VV+D     +LA  +++AK P +    C AH  DL+L+D+GK+      ++R  ++V F+ NH  T  I    T+   LV    TRFAT  +   R+   K  L K F +D    E++++       K  ++A  +      ++  FW ++ F ++ M P+ ++LR+ D    P M     G+I     ++ I + +++   A +G   K     E   ++  +   +L +   P+ +A + L+P++   +     D +++  L    +RL  S  +   A +  +      G  G +G++  R               ++MAPA+WW+NYG+  P L  +A+RV S   +S+G ERNWS +
Sbjct:  236 LINFLVNCPTGSMFVKSIDASAYMKTGEKLFELLDSFVEEIGEKNVVQVVTDNGSNYVLAGKLLQAKRPHLFWTPCAAHCIDLILEDIGKIPRVKRTIQRGVTLVGFIYNHSLTLNIMRKFTNKAELVRYGVTRFATTFLTLQRLHNKKNNLRKMFTSD----EWLKS-------KTAKEAKGKRATDIVLMPSFWNDVVFCLKAMGPLVQVLRLVDNERKPAM-----GYI-----YEAIDRAKESIQNAFKGNVDK---YKEIFAIIDRRWECQLHH---PLHAAGYYLNPQFFYSNKQIENDPEVVEGLYKCIERLCTSEDDVDNATVQLSTYRRAEGLFGLSGAKRQR---------------ATMAPAEWWKNYGVRTPHLQNIAIRVLSLTCSSSGCERNWSTF 603          
BLAST of mRNA_L-elsbetiae_contig18352.5322.1 vs. uniprot
Match: UPI001C4BECD0 (uncharacterized protein LOC121979738 n=1 Tax=Zingiber officinale TaxID=94328 RepID=UPI001C4BECD0)

HSP 1 Score: 104 bits (259), Expect = 1.870e-20
Identity = 97/396 (24.49%), Postives = 174/396 (43.94%), Query Frame = 1
Query:   55 FLAGVDTTGNKKDMPFLYTLLQKYIDE----HVDLVVSDGACAGLLA--IIEAKHPSVTGMKCCAHGADLLLKDVGKLDFFADILKRINSIVKFVKNHHGTNAIYGSHTDLRLVTPCATRFATYVIV--AMRMLKATLKNFAA--DTRTAEYIRTTQQATVRKAGRDAVAEINQGDAMVGDFWFELEFYVQTMTPIYELLRMGDGLLPCMSKFLNGFINIPKTWDQIVKDQQTDTCAQEGEGWKDTVISERLVLLKEKAAKRLDYIWNPMMSAAFALDPEYRKVDLLNIKDGQILTDLDTMYKRLLISHGNDSAAAISAAADEPEGGPVGKAGSQFARYRSGKWKGADLLGYASSMAPADWWENYGIGMPELAKVAMRVTSKVPASAGAERNWSLY 1212
            F   +D T +  D  +++ L+   + E    H+  V++D       A  I+E ++ ++    C AH  DL++ D+GKLD    ++K+  S+ KF+ NHH  + +     +  ++ P ATRFAT+ ++  ++   K  LK   +  D   + Y  TT+   V+K              M   FW  +   +  + P+Y +LR  D  +    +  N +  I +  ++I +  Q  T  Q    + D +I++R            D +  P+  A + L+P Y+    L   D  ++        R +IS  + +  +I+   +E          S+  R   G +     +     M  A+WW  YG   P L K+A+R+ S+  +S+G ERNWS +
Sbjct:   16 FHKSIDATTDYHDALYIFRLMDSVVHEIGAEHIVQVITDNGANFKRAGEILEQRYQTLFWTPCAAHCIDLMMADIGKLDIVKKVVKKGQSLTKFIYNHHWVHGLMRKFINGEILRPGATRFATHFLLLKSLNQKKVGLKAMFSSDDWEASRYSNTTEGKEVQKI------------IMSVRFWDYIADILIAVEPLYVVLRKVD--MDKKPQMGNVYCLIHEAKEEIKRRLQLPTKYQH---YID-IITKRWD----------DQMGKPIHLAGYYLNPAYQYRYNLGTNDDLLVA------LRHVISRLHTNTESIAETINE----------SRLFREAYGSFSDPIAVSCRYKMDAAEWWLQYGGSAPNLKKIAVRILSQTTSSSGCERNWSTF 367          
BLAST of mRNA_L-elsbetiae_contig18352.5322.1 vs. uniprot
Match: UPI001C4C8CA5 (uncharacterized protein LOC121992379 n=4 Tax=Zingiber officinale TaxID=94328 RepID=UPI001C4C8CA5)

HSP 1 Score: 101 bits (252), Expect = 2.060e-19
Identity = 98/402 (24.38%), Postives = 175/402 (43.53%), Query Frame = 1
Query:   55 FLAGVDTTGNKKDMPFLYTLLQKYIDE----HVDLVVSDGACAGLLA--IIEAKHPSVTGMKCCAHGADLLLKDVGKLDFFADILKRINSIVKFVKNHHGTNAIYGSHTDLRLVTPCATRFATYVIVAMRML--KATLKNF--AADTRTAEYIRTTQQATVRKAGRDAVAEINQGDAMVGDFWFELEFYVQTMTPIYELLRMGDGLLPCMSKFLNGFINIPKTWDQIVKDQQTDTCAQEGEGWKDTVISERLVLLKEKAAKRLDYIWNPMMS-----AAFALDPEYR-KVDLLNIKDGQILTDLDTMYKRLLISHGNDSAAAISAAADEPEGGPVGKAGSQFARYRSGKWKGADLLGYASSMAPADWWENYGIGMPELAKVAMRVTSKVPASAGAERNWSLY 1212
            F   VD T +  D  ++Y L+   + E    H+  V++D       A  ++E K+ ++    C AH  DL++ D+GKLD    ++K+  S+ KF+ NHH  + +     +  ++ P ATRFAT+ ++   +   K  LK    + D  T+ Y  +T+   V+K              +   FW  +   +  + P+Y +LR  D  +    +  N +  I +  ++I +  Q+ T  Q    +   +I+ R               W+  M      A + L+P Y+ + +L   +D  +L  L  +  RL  +    +A AI+               S+  R   G +  +  +     M  A+WW  YG   P L K+A+++ S+  +S+G ERNWS +
Sbjct:  316 FHKSVDATADYHDASYIYHLMDNVVQEIGAEHIVQVITDNGANFKRAGELLEQKYQTLFWTPCAAHCVDLMMADIGKLDIVKKVVKKGQSLTKFLYNHHWVHGLMRKFINGEILRPGATRFATHFLLLKSLFQKKVGLKAMFTSEDWETSRYSSSTEGREVQKI------------IISARFWDYISDILIAVEPLYVVLRKVD--MDKKPQMGNVYRLIHEAKEEIKRRLQSPTKYQ----YYIDIITTR---------------WDNQMGKHIHLAGYYLNPAYQYRYNLATNED--LLVALRNVISRLQKNR-ELAAEAINE--------------SRLFREAYGSFSDSFAVSCRYKMDAAEWWLQYGGSAPNLKKIAVQILSQTTSSSGCERNWSTF 667          
BLAST of mRNA_L-elsbetiae_contig18352.5322.1 vs. uniprot
Match: A0A834LP49_RHOSS (Uncharacterized protein n=2 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834LP49_RHOSS)

HSP 1 Score: 97.1 bits (240), Expect = 5.730e-18
Identity = 108/418 (25.84%), Postives = 181/418 (43.30%), Query Frame = 1
Query:   16 LVNIIDSYDGEERFLAGVDTTGNKKDMPFLYTLLQKYID----EHVDLVVSDGA--CAGLLAIIEAKHPSVTGMKCCAHGADLLLKDVGK-----LDFFADILKRINSIVKFVKNHHGTNAIYGSHTDLRLVTPCATRFATYVIVAMRMLKATLKNFAADTRTAEYIRTTQQATVRKAGRDAVAEINQGDAMVGD-FWFELEFYVQTMTPIYELLRMGDGLLPCMSKFLNGFINIPKTWDQIVKDQQTDTCAQEGEGWKDTVISERLV--LLKEKAAKRLDYIWNPMMSAAFALDPEY-RKVDLLNIKDG---QILTDLDTMYKRLLISHGNDSAAAISAAADEP-EGGPVGKAGSQFARYRSGKWKGADLLGYASSMAPADWWENYGIGMPELAKVAMRVTSKVPASAGAERNWSLY 1212
            LVN++    G   F++  + +  +K+   +  LL K ID     +V  VV+D A  C     II+ KHP V    C AH  +LL+KD+ K     L F  +  K+  ++VK++KNH  + A++ S + L+L+    TRF  + IV  R+ K         +     + + Q   +R++        N  D ++ D FW +++  ++   PIY +LR  D       K + G +            +Q DT   +    KD + ++ +V  L+      R D +  P+   A+ L P Y     LL    G   +     D+  +R  +        AI     +P E G + +  S F   + G +     +   ++M    WW  YG   P L  +A++V S+   ++ AER WS Y
Sbjct:  241 LVNVMAVSGGRAIFISAYEVSAVEKNATNIAELLFKAIDYVGPSNVVQVVTDNAANCKAAGGIIQRKHPHVFWSGCLAHTLNLLMKDIAKSKDPALSFVDETYKKGKAMVKYIKNHSSSQALFKSFSQLQLLKAKKTRFGHHYIVMHRLDKV-------RSALVSMVLSNQWGNLRRSSSAPEEHDNVRDTIMNDDFWRKVKRILRITKPIYRMLRFSDT-----DKAVIGEVY-----------EQMDTMLGQ---IKDILSNDPVVYNLIHTLVVARWDKMNIPLHCLAYVLVPRYYTNAWLLKPAPGGGRRKKPHTDSEVQRGYLE-------AIEKIIQDPIEAGLIRQQISDFVSNK-GVFAQPQAVHDRATMTALSWWHLYGGVAPALLSLALKVLSQSVNTSCAERCWSTY 624          
BLAST of mRNA_L-elsbetiae_contig18352.5322.1 vs. uniprot
Match: A0A388LM21_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LM21_CHABU)

HSP 1 Score: 96.3 bits (238), Expect = 1.110e-17
Identity = 88/381 (23.10%), Postives = 163/381 (42.78%), Query Frame = 1
Query:  154 SDGACAGLLAIIEAKHPSVTGMKCCAHGADLLLKDVGKLDFFADILKRINSIVKFVKNHHGTNAIYGSHTDLR-------LVTPCATRFATYVIVAMRMLKATLKNFAADTRTAEYIRTTQQATVRKAGRDAVAEIN----------QGDAMVGD--FWFELEFYVQTMTPIYELLRMGDGLLPCMSKFLNGFINIPKTWDQIVKDQQTDTCAQEGEGWKDTVISERLVLLKEKAAKRLDYIWNPMMSAAFALDPEYRKVDLLNIKDGQILTDLDTMYKRLLISHGNDSAAAISAAADEPEGGPVGKAGSQFARYRSGKWK---GADLLGYASSMAPAD------WWENYGIGMPELAKVAMRVTSKVPASAGAERNWSLY 1212
            S    A  +   + +   +  + C AH  DL ++DVG   +  DI+K+ N +VKF +NH    ++  +    +       L+ P  TRF T+ ++  R+L                  T ++A  R    D+  +++          + ++++ D  FW +L+   Q M   Y++LRM D  + C+S+  +  +++      ++    TD               ER  +L++   KR D + +P+ + A  LDP  R + + +  D  ++   D++  RL+  +G+                       +F  Y+   +    G  + G A+++  A+      WWE +G G PEL  +AMR+ S    S+ AERNWS +
Sbjct:  509 SGNKSAATMLRADPEFQQIYWIPCIAHCMDLFMQDVGDKPWAKDIIKKANMVVKFFRNHRWPRSMLRTELMAQKGVKIRVLLRPALTRFGTHFVMLDRLL------------------TCERALRRLVLGDSWTKMDWQPYIWTDAYEVESLITDRAFWADLKKLHQVMKGSYDVLRMVDKDIHCLSRVYDAAVDLKNC---VLHAPLTD--------------DERDSILRD-VGKRTDMLLSPVHAVARLLDPRLRDITVFSNLD--LMAQFDSVVDRLVAKNGSQ----------------------KFTNYKDQLYDFQFGRGIFGDAAALRRAEKDNAVLWWEAHGGGHPELKMLAMRMLSIWTTSSPAERNWSTW 829          
BLAST of mRNA_L-elsbetiae_contig18352.5322.1 vs. uniprot
Match: A0A388KDY1_CHABU (DUF659 domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KDY1_CHABU)

HSP 1 Score: 94.7 bits (234), Expect = 1.860e-17
Identity = 102/389 (26.22%), Postives = 166/389 (42.67%), Query Frame = 1
Query:   76 TGNKKDMPFLYTLLQKYIDE----HVDLVVSDGA--CAGLLAIIEAKHPSVTGMKCCAHGADLLLKDVGKLDFFADILKRINSIVKFVKNHHGTNAIYGSHTDLR-LVTPCATRFATYVIVAMRMLK---ATLKNFAADTRTAEYIRTTQQATVRKAGRDAVAEINQGDAMVGDFWFELEFYVQTMTPIYELLRMGDGLLPCMSKFLNGFINIPKTWDQIVKDQQTDTCAQEGEGWKDTVISERLVLLKEKAAKRLDYIWNPMMSAAFALDPEYRKVDLLNIKDGQILTDLDTMYKRLLISHGNDSAAAISAAADEPEGGPVGKAGSQFARYRSGKWKGADLLGYASSMAPADWWENYGIGMPELAKVAMRVTSKVPASAGAERNWSLY 1212
            +G +K     + +L + I E     V  V+ D A  CA    ++E   P    + C AH  DL+L D+GK+++ A+ + + N +V FV NH     +Y  H   R L+ P ATRFAT   +  R+ K   A L     D  TA  +   Q +T+ +   D + +          FW  +   +  +  I  LL++ DG  P +SK       +    D+IV+  + +         KD  + +R  + +    +R + +  P+  AA  LDPEYR  +    KD +I     T     L     +    ++   D      +GK  SQ A            +  A    PA WW+ +   +  L   A+R+  +  +++G ERNWSL+
Sbjct:    2 SGKEKGAATYFDILSESIREVGEKSVVGVIMDSAAVCARAGKLVEDTFPLTFHVPCAAHCLDLMLHDIGKIEWVAETVTKANDMVNFVMNHQRDRDVYYIHAGGRQLLRPAATRFATNFHMLDRLKKQRKALLAMVTDDMWTATLVPHAQCSTLHEM-EDIILD-------AAGFWDLVNKAINVVYDIVLLLKLADGNGPTISK-------VYAKMDRIVERLRVN---------KDLTVDQRDEI-EVMVMRRWNAMTTPLHCAALFLDPEYRSSE--PHKDAEIQDGFYTWVYTWLKGASQEVCDQVAYEVDCWVQN-IGKFNSQVA------------MDAARKQNPAAWWKCWCDELYHLQPHAIRLLGQGSSASGCERNWSLF 350          
BLAST of mRNA_L-elsbetiae_contig18352.5322.1 vs. uniprot
Match: UPI001036BBA7 (uncharacterized protein LOC114314094 n=1 Tax=Camellia sinensis TaxID=4442 RepID=UPI001036BBA7)

HSP 1 Score: 92.8 bits (229), Expect = 1.390e-16
Identity = 101/441 (22.90%), Postives = 188/441 (42.63%), Query Frame = 1
Query:   13 PLVNIIDSYDGEERFLAGVDTTGNKKDMPFLYTLLQKYIDE----HVDLVVSDGA----CAGLLAIIEAKHPSVTGMKCCAHGADLLLKDV----------GKLDFFADILKRINSIVKFVKNHHGTNAIYGSHTDLRLVTPCATRFATYVI--VAMRMLKATLKNFAADTRTAEYIRTTQQATVRKAGRDAVAEINQGDA---MVGDFWFE-LEFYVQTMTPIYELLRMGDGLLPCMSKFLNGFINIPKTWDQIVKDQQTDTCAQEGEGWKDTVISERLVLLKEKAAKRLDYIWN----PMMSAAFALDPEY----------RKVDLLNI-KDGQILTDLDTMYKRLLISHGNDSAAAISAAADEPEGGPVGKAGSQFARYRSGK--WKGADLLGYASSMAPADWWENYGIGMPELAKVAMRVTSKVPASAGAERNWSLY 1212
            PL+N++ S  G   F+  +D++G  KD  ++ +L  K I E    +V  +V+D A     AGL   IE  +P +    C  H  +L LK +           +  + +D++ ++ +I  F+ NH    +I+  ++ LRL++   TRFA+ +I  V +R +K +L+    D     Y         RK G ++VAEI   +    +V D W++ +++ +    PI ++LR  D   P +    +        WD +++  +      EG    D ++ +          + L+  WN    P+   A +L P+Y           ++  ++  +D ++  +     KRL                  P    + K  +++  + SG   +    ++       P  WW N+G   P L  +A ++  +  +S+  ERNWS Y
Sbjct:  238 PLINVMASSAGGSMFVKAIDSSGIVKDGEYVASLFIKAIKEVGEANVVQIVTDNASNYKAAGLS--IENTYPHIFWTPCVVHSLNLALKSICTPPDKSAQYDQCKWISDLVSQVQNIRNFILNHSMALSIFNEYSTLRLLSVAETRFASNIIMDVRLREVKTSLEKMVMDANWKIY---------RKDG-NSVAEIKAREVKQCIVNDSWWDSIDYLISFTKPIIDMLREADTDSPVLHLVYD-------MWDTMIESVKKIIFDHEGI---DLIVGQSTFF--NVIHQILESRWNKSNTPLHCMAHSLVPKYYCHAWLQDGGNEIPRISPHEDHEVSMNRSKCLKRLF-----------------PNQTDLRKVYAEYGAFSSGSDYFNQPHVIDARIFEEPLSWWANHGAEAPLLQALAFKLLVQPASSSCCERNWSTY 637          
BLAST of mRNA_L-elsbetiae_contig18352.5322.1 vs. uniprot
Match: UPI000E6FA506 (uncharacterized protein LOC113306331 n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6FA506)

HSP 1 Score: 90.5 bits (223), Expect = 5.330e-16
Identity = 101/424 (23.82%), Postives = 177/424 (41.75%), Query Frame = 1
Query:   55 FLAGVDTTGNKKDMPFLYTLLQKYIDE----HVDLVVSDGA--CAGLLAIIEAKHPSVTGMKCCAHGADLLLKDV----------GKLDFFA---DILKRINSIVKFVKNHHGTNAIYGSHTDLRLVTPCATRFATYVIVAMRML--KATLKNFAADTRTAEYIRTTQQATVRKAGRDAVAEINQGDAMVGDFWFELEFYVQTMT-PIYELLRMGDGLLPCMSKFLNGFINIPKTWDQIVKDQQTDTCAQEGEGWKDTVISERLVLLKEKAAKRLDYIWNPMMSAAFALDPEYRKVDLLN--------IKDGQILTDLDTMYKRLLISHGNDSAAAISAAADEPEGGPVGKAGSQFARYRSGKWKGADLLGYASSMAPAD--------WWENYGIGMPELAKVAMRVTSKVPASAGAERNWSLY 1212
            FL  VDT+GN KD+ +L +  +  I+E    +V  +++D A  C      +E     +    C AH  +L LKD+          G+ + F    D++    ++  FV NH     IY  +  L+L++   TRFAT +I+ +R++  K+ L     D    +Y            G D    +   + +  D W+E   Y+  +T PI + LR  D   P + K  +        WD +++  +      E +   +T  S       +   +R +   NP++  A  L+P++   + +          +D ++     T ++RL     ++   AI+                Q+     G + G  L G++S ++  D        WW NYG   P LAK+A  + ++   ++ AERNWS Y
Sbjct:   10 FLKAVDTSGNYKDVAYLASFFKNTIEEVGVKNVVQLITDNAPVCKAAAMQVENTFKHIFWTPCVAHTLNLALKDLCECKPTTKHQGRFEEFQWMQDLVTEGRAVKIFVANHSKALKIYKKYATLKLLSYGETRFATNLIMLLRLVEVKSALSAMVMDKDWKDY-----------KGEDVAKALLIKNRICDDDWWEKVCYLINLTAPIVDFLRFTDTDKPSLHKVYD-------MWDTMIERVRLVIYEHEDKNL-ETGSSSFYDQAHDVLVRRWNKSNNPLICLAHCLNPKFYSDEWIEGGLNRVHPHRDEELSNGRITFFERLFTI--SEDRKAIT---------------DQY-----GAFSGCSL-GFSSWISQRDRNTEDAASWWNNYGSSAPLLAKLADSLMNQPCTASSAERNWSTY 391          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18352.5322.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835SQR0_9CHLO1.020e-3427.68Uncharacterized protein n=1 Tax=Chlamydomonas schl... [more]
A0A1Y1IK20_KLENI1.740e-2631.19DUF659 domain-containing protein n=1 Tax=Klebsormi... [more]
A0A8B8M407_ABRPR8.350e-2325.61uncharacterized protein LOC113870053 n=1 Tax=Abrus... [more]
UPI001C4BECD01.870e-2024.49uncharacterized protein LOC121979738 n=1 Tax=Zingi... [more]
UPI001C4C8CA52.060e-1924.38uncharacterized protein LOC121992379 n=4 Tax=Zingi... [more]
A0A834LP49_RHOSS5.730e-1825.84Uncharacterized protein n=2 Tax=Rhododendron simsi... [more]
A0A388LM21_CHABU1.110e-1723.10Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A388KDY1_CHABU1.860e-1726.22DUF659 domain-containing protein n=1 Tax=Chara bra... [more]
UPI001036BBA71.390e-1622.90uncharacterized protein LOC114314094 n=1 Tax=Camel... [more]
UPI000E6FA5065.330e-1623.82uncharacterized protein LOC113306331 n=1 Tax=Papav... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig18352contigL-elsbetiae_contig18352:846..2490 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score125.6
Seed ortholog evalue5.5e-26
Seed eggNOG ortholog71139.XP_010032259.1
Hectar predicted targeting categoryother localisation
EggNOG OGs2CU6P@1,2RJJK@2759,37T0A@33090,3GFI7@35493
Best tax levelStreptophyta
Best eggNOG OGNA|NA|NA
Exons3
Model size1236
Cds size1236
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig18352.5322.1prot_L-elsbetiae_contig18352.5322.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig18352 846..2490 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815764.9572725-CDS-L-elsbetiae_contig18352:845..10511622815764.9572725-CDS-L-elsbetiae_contig18352:845..1051Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18352 846..1051 +
1691683087.7182465-CDS-L-elsbetiae_contig18352:845..10511691683087.7182465-CDS-L-elsbetiae_contig18352:845..1051Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18352 846..1051 +
1622815764.969911-CDS-L-elsbetiae_contig18352:1267..15001622815764.969911-CDS-L-elsbetiae_contig18352:1267..1500Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18352 1268..1500 +
1691683087.7303214-CDS-L-elsbetiae_contig18352:1267..15001691683087.7303214-CDS-L-elsbetiae_contig18352:1267..1500Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18352 1268..1500 +
1622815764.9835668-CDS-L-elsbetiae_contig18352:1693..24901622815764.9835668-CDS-L-elsbetiae_contig18352:1693..2490Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18352 1694..2490 +
1691683087.7401383-CDS-L-elsbetiae_contig18352:1693..24901691683087.7401383-CDS-L-elsbetiae_contig18352:1693..2490Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18352 1694..2490 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig18352.5322.1

>prot_L-elsbetiae_contig18352.5322.1 ID=prot_L-elsbetiae_contig18352.5322.1|Name=mRNA_L-elsbetiae_contig18352.5322.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=412bp
AQGVPLVNIIDSYDGEERFLAGVDTTGNKKDMPFLYTLLQKYIDEHVDLV
VSDGACAGLLAIIEAKHPSVTGMKCCAHGADLLLKDVGKLDFFADILKRI
NSIVKFVKNHHGTNAIYGSHTDLRLVTPCATRFATYVIVAMRMLKATLKN
FAADTRTAEYIRTTQQATVRKAGRDAVAEINQGDAMVGDFWFELEFYVQT
MTPIYELLRMGDGLLPCMSKFLNGFINIPKTWDQIVKDQQTDTCAQEGEG
WKDTVISERLVLLKEKAAKRLDYIWNPMMSAAFALDPEYRKVDLLNIKDG
QILTDLDTMYKRLLISHGNDSAAAISAAADEPEGGPVGKAGSQFARYRSG
KWKGADLLGYASSMAPADWWENYGIGMPELAKVAMRVTSKVPASAGAERN
WSLYGGETQLK*
back to top

mRNA from alignment at L-elsbetiae_contig18352:846..2490+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig18352.5322.1 ID=mRNA_L-elsbetiae_contig18352.5322.1|Name=mRNA_L-elsbetiae_contig18352.5322.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1645bp|location=Sequence derived from alignment at L-elsbetiae_contig18352:846..2490+ (Laminarionema elsbetiae ELsaHSoW15)
GCACAGGGGGTGCCGTTGGTGAACATCATCGACTCGTATGACGGCGAGGA GCGGTTCCTGGCTGGTGTGGATACTACCGGGAACAAGAAAGACATGCCGT TTCTCTACACGCTGCTGCAGAAGTACATCGACGAGCACGTGGACCTCGTT GTTTCCGACGGGGCCTGCGCTGGTCTGCTCGCCATCATCGAGGCGAAACA CCCCAGGTACATTGCTGGAAGCCCTACTCTGTAGCTCTGTGGTACACAAA ATGAATAAATGATGAAATGATTCGATTCTATTTTTTTTTCTTCCGCTGCT GTTGCTCTGTTTCTTTTTCTCACATATAACATATCACTGCCCCAGCATAT CTCTGCTGTCCCTCCTCTTATACCCACCTTGGTTCCTCGTTTTTTTTTCT TCTTTCTGTATCTATGAACCAGTGTCACAGGCATGAAGTGCTGTGCTCAC GGTGCCGACCTGTTGCTCAAGGACGTCGGGAAGCTCGACTTCTTCGCCGA CATCCTGAAGCGCATCAACAGCATCGTCAAGTTCGTCAAGAACCACCACG GCACCAACGCCATCTACGGAAGCCACACCGACCTCCGGTTGGTCACCCCC TGCGCCACCCGGTTCGCGACCTACGTCATCGTCGCCATGCGCATGCTGAA GGCAAGTTTTGTTTCTTCGCAGAGTGAGGACGCCGGGATTTTTATTTCGG TCTTTCGTACTTTCTAATGTTATGACTTCACTTTTTTTTGTGTGTACTTT CCTTTTGCTTGCTTTCCCCGCTGCCGGCTAACTGTGCTGTTTCTTTTTTT CCTGTGCTCTACCCATGTCTTCCTCCAAACGTTGTCAGGTTAAACCAGCT CTGAAGAACTTCGCCGCCGACACGCGCACAGCAGAGTACATCAGGACCAC ACAGCAGGCCACCGTTCGCAAGGCCGGCCGAGACGCGGTGGCAGAGATCA ACCAAGGCGATGCGATGGTGGGCGACTTCTGGTTCGAGCTGGAGTTCTAC GTGCAGACGATGACCCCCATCTACGAGCTGCTCCGCATGGGGGACGGGCT GTTGCCGTGCATGTCCAAGTTCCTCAACGGCTTCATCAACATCCCGAAGA CGTGGGACCAGATCGTGAAGGATCAGCAGACGGACACCTGTGCTCAGGAG GGCGAGGGCTGGAAGGACACCGTCATTTCAGAGCGCTTGGTTCTCCTGAA GGAGAAGGCCGCGAAACGTCTCGACTACATCTGGAACCCCATGATGTCTG CTGCCTTCGCCCTGGACCCCGAGTACCGGAAAGTCGACCTACTCAACATC AAGGACGGCCAGATCCTGACGGACTTGGACACCATGTACAAGCGTCTGCT CATTTCCCACGGCAACGACTCCGCCGCCGCCATCTCGGCGGCGGCGGACG AACCTGAGGGTGGGCCGGTGGGAAAGGCAGGGAGCCAGTTCGCCCGCTAC AGATCCGGCAAGTGGAAGGGGGCGGACTTGCTGGGGTACGCCAGTTCGAT GGCCCCCGCTGACTGGTGGGAGAACTACGGCATCGGCATGCCGGAGCTGG CGAAGGTGGCCATGAGGGTGACTTCCAAGGTACCTGCATCAGCAGGGGCG GAGCGCAACTGGAGTTTGTACGGAGGTGAGACTCAGCTCAAGTAG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig18352:846..2490+

>mRNA_L-elsbetiae_contig18352.5322.1 ID=mRNA_L-elsbetiae_contig18352.5322.1|Name=mRNA_L-elsbetiae_contig18352.5322.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2472bp|location=Sequence derived from alignment at L-elsbetiae_contig18352:846..2490+ (Laminarionema elsbetiae ELsaHSoW15)
GCACAGGGGGTGCCGTTGGTGAACATCATCGACTCGTATGACGGCGAGGA
GCGGTTCCTGGCTGGTGTGGATACTACCGGGAACAAGAAAGACATGCCGT
TTCTCTACACGCTGCTGCAGAAGTACATCGACGAGCACGTGGACCTCGTT
GTTTCCGACGGGGCCTGCGCTGGTCTGCTCGCCATCATCGAGGCGAAACA
CCCCAGGCACAGGGGGTGCCGTTGGTGAACATCATCGACTCGTATGACGG
CGAGGAGCGGTTCCTGGCTGGTGTGGATACTACCGGGAACAAGAAAGACA
TGCCGTTTCTCTACACGCTGCTGCAGAAGTACATCGACGAGCACGTGGAC
CTCGTTGTTTCCGACGGGGCCTGCGCTGGTCTGCTCGCCATCATCGAGGC
GAAACACCCCAGTGTCACAGGCATGAAGTGCTGTGCTCACGGTGCCGACC
TGTTGCTCAAGGACGTCGGGAAGCTCGACTTCTTCGCCGACATCCTGAAG
CGCATCAACAGCATCGTCAAGTTCGTCAAGAACCACCACGGCACCAACGC
CATCTACGGAAGCCACACCGACCTCCGGTTGGTCACCCCCTGCGCCACCC
GGTTCGCGACCTACGTCATCGTCGCCATGCGCATGCTGAAGGCAATGTCA
CAGGCATGAAGTGCTGTGCTCACGGTGCCGACCTGTTGCTCAAGGACGTC
GGGAAGCTCGACTTCTTCGCCGACATCCTGAAGCGCATCAACAGCATCGT
CAAGTTCGTCAAGAACCACCACGGCACCAACGCCATCTACGGAAGCCACA
CCGACCTCCGGTTGGTCACCCCCTGCGCCACCCGGTTCGCGACCTACGTC
ATCGTCGCCATGCGCATGCTGAAGGCAACTCTGAAGAACTTCGCCGCCGA
CACGCGCACAGCAGAGTACATCAGGACCACACAGCAGGCCACCGTTCGCA
AGGCCGGCCGAGACGCGGTGGCAGAGATCAACCAAGGCGATGCGATGGTG
GGCGACTTCTGGTTCGAGCTGGAGTTCTACGTGCAGACGATGACCCCCAT
CTACGAGCTGCTCCGCATGGGGGACGGGCTGTTGCCGTGCATGTCCAAGT
TCCTCAACGGCTTCATCAACATCCCGAAGACGTGGGACCAGATCGTGAAG
GATCAGCAGACGGACACCTGTGCTCAGGAGGGCGAGGGCTGGAAGGACAC
CGTCATTTCAGAGCGCTTGGTTCTCCTGAAGGAGAAGGCCGCGAAACGTC
TCGACTACATCTGGAACCCCATGATGTCTGCTGCCTTCGCCCTGGACCCC
GAGTACCGGAAAGTCGACCTACTCAACATCAAGGACGGCCAGATCCTGAC
GGACTTGGACACCATGTACAAGCGTCTGCTCATTTCCCACGGCAACGACT
CCGCCGCCGCCATCTCGGCGGCGGCGGACGAACCTGAGGGTGGGCCGGTG
GGAAAGGCAGGGAGCCAGTTCGCCCGCTACAGATCCGGCAAGTGGAAGGG
GGCGGACTTGCTGGGGTACGCCAGTTCGATGGCCCCCGCTGACTGGTGGG
AGAACTACGGCATCGGCATGCCGGAGCTGGCGAAGGTGGCCATGAGGGTG
ACTTCCAAGGTACCTGCATCAGCAGGGGCGGAGCGCAACTGGAGTTTGTA
CGGAGGTGAGACTCAGCTCAAGTAGCTCTGAAGAACTTCGCCGCCGACAC
GCGCACAGCAGAGTACATCAGGACCACACAGCAGGCCACCGTTCGCAAGG
CCGGCCGAGACGCGGTGGCAGAGATCAACCAAGGCGATGCGATGGTGGGC
GACTTCTGGTTCGAGCTGGAGTTCTACGTGCAGACGATGACCCCCATCTA
CGAGCTGCTCCGCATGGGGGACGGGCTGTTGCCGTGCATGTCCAAGTTCC
TCAACGGCTTCATCAACATCCCGAAGACGTGGGACCAGATCGTGAAGGAT
CAGCAGACGGACACCTGTGCTCAGGAGGGCGAGGGCTGGAAGGACACCGT
CATTTCAGAGCGCTTGGTTCTCCTGAAGGAGAAGGCCGCGAAACGTCTCG
ACTACATCTGGAACCCCATGATGTCTGCTGCCTTCGCCCTGGACCCCGAG
TACCGGAAAGTCGACCTACTCAACATCAAGGACGGCCAGATCCTGACGGA
CTTGGACACCATGTACAAGCGTCTGCTCATTTCCCACGGCAACGACTCCG
CCGCCGCCATCTCGGCGGCGGCGGACGAACCTGAGGGTGGGCCGGTGGGA
AAGGCAGGGAGCCAGTTCGCCCGCTACAGATCCGGCAAGTGGAAGGGGGC
GGACTTGCTGGGGTACGCCAGTTCGATGGCCCCCGCTGACTGGTGGGAGA
ACTACGGCATCGGCATGCCGGAGCTGGCGAAGGTGGCCATGAGGGTGACT
TCCAAGGTACCTGCATCAGCAGGGGCGGAGCGCAACTGGAGTTTGTACGG
AGGTGAGACTCAGCTCAAGTAG
back to top