|
Homology
BLAST of mRNA_L-elsbetiae_contig1831.5306.1 vs. uniprot
Match: A0A4D9DB22_9STRA (Archease domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DB22_9STRA) HSP 1 Score: 161 bits (408), Expect = 3.500e-43 Identity = 87/171 (50.88%), Postives = 109/171 (63.74%), Query Frame = 1
Query: 559 GADGANFEYLDHTADVQLHSWGDSVERAMEGAVAAMFNTITDIAKVDVDPSLTRVMEIEGHDAKSLLFSLLDEFLFLFHSEGLAVKRTTV---------KGTISRDSGPSP----------RWRLTATAEGETFDLSKHPQGTEVKAITYSNMQINEASDGRTDIYVIVDI 1014
G G +EYLDHTADVQLH+WG + A E V M N +TD++KVDVDPS T+ E+EGHD SLLF+ LDEFLF F SE K + T S+ +G + ++ + AEGETF+LSKHPQGTEVKAITYS MQI+E ++GR D+YVI+DI
Sbjct: 27 GVAGEFYEYLDHTADVQLHAWGKDLTHAFENIVPCMLNYMTDLSKVDVDPSQTQTFEVEGHDLSSLLFAWLDEFLFRFSSEAFVCKAAKILEFVRPFENANTSSKSTGGAVGELKEGEKQGKYTIKVQAEGETFNLSKHPQGTEVKAITYSAMQIHE-NEGRADLYVIIDI 196
BLAST of mRNA_L-elsbetiae_contig1831.5306.1 vs. uniprot
Match: W7TI59_9STRA (Archease domain protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TI59_9STRA) HSP 1 Score: 160 bits (404), Expect = 7.160e-42 Identity = 86/171 (50.29%), Postives = 108/171 (63.16%), Query Frame = 1
Query: 559 GADGANFEYLDHTADVQLHSWGDSVERAMEGAVAAMFNTITDIAKVDVDPSLTRVMEIEGHDAKSLLFSLLDEFLFLFHSEGLAVKRTTV---------KGTISRDSGPSP----------RWRLTATAEGETFDLSKHPQGTEVKAITYSNMQINEASDGRTDIYVIVDI 1014
G G +EYLDHTADVQLH+WG + A E V M N +TD++KVDVDPS T+ E+EGHD SLLF+ LDEFLF F SE K + T S+ +G + ++ + AEGETF L+KHPQGTEVKAITYS MQI+E ++GR D+YVI+DI
Sbjct: 85 GVAGEFYEYLDHTADVQLHAWGKDLTHAFENIVPCMLNYMTDLSKVDVDPSQTQTFEVEGHDLSSLLFAWLDEFLFRFSSEAFVCKEAKILEFVRPLENANTSSKSTGGAVGKLNEGERQGKYTIKVQAEGETFTLTKHPQGTEVKAITYSAMQIHE-NEGRADLYVIIDI 254
BLAST of mRNA_L-elsbetiae_contig1831.5306.1 vs. uniprot
Match: A0A7S2MNF8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MNF8_9STRA) HSP 1 Score: 149 bits (376), Expect = 6.590e-39 Identity = 74/147 (50.34%), Postives = 97/147 (65.99%), Query Frame = 1
Query: 574 NFEYLDHTADVQLHSWGDSVERAMEGAVAAMFNTITDIAKVDVDPSLTRVMEIEGHDAKSLLFSLLDEFLFLFHSEGLAVKRTTVKGTISRDSGPSPRWRLTATAEGETFDLSKHPQGTEVKAITYSNMQINEASDGRTDIYVIVDI 1014
NFEYLDHTADVQLH+WG S+E A E A+MF+ ++DI + VDP++T + GHD SLL+ LDE LF F +E + ++ D WRL EGE DLS+HPQGTEVKAIT+SNMQI++ D + D++VI+DI
Sbjct: 28 NFEYLDHTADVQLHAWGSSIEEAFEHMAASMFHYMSDIRTIRVDPTMTMKATVSGHDKTSLLYRFLDELLFQFATEDFICRHVFIEWMKQGDDN---MWRLQMRLEGEKLDLSRHPQGTEVKAITFSNMQIHQRED-QVDLFVIIDI 170
BLAST of mRNA_L-elsbetiae_contig1831.5306.1 vs. uniprot
Match: A0A2P6TT68_CHLSO (Archease-like n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TT68_CHLSO) HSP 1 Score: 148 bits (373), Expect = 2.450e-37 Identity = 76/149 (51.01%), Postives = 98/149 (65.77%), Query Frame = 1
Query: 568 GANFEYLDHTADVQLHSWGDSVERAMEGAVAAMFNTITDIAKVDVDPSLTRVMEIEGHDAKSLLFSLLDEFLFLFHSEGLAVKRTTVKGTISRDSGPSPRWRLTATAEGETFDLSKHPQGTEVKAITYSNMQINEASDGRTDIYVIVDI 1014
G FEYLDHTADVQLH+WG+++ A E MFN +T + + +DP+LTR E EGHD +SLLF+ LDE LF F +E K+ + RD+ WR+ A +GETFD +H GTEVKAITYS MQINE + G +++VIVDI
Sbjct: 121 GQKFEYLDHTADVQLHAWGETLREAFENVGLCMFNYMTPLKGIGIDPALTRTYEAEGHDLQSLLFNFLDELLFAFATEFFVAKQLRIT-RFDRDN-----WRIMAEGQGETFDRQRHVCGTEVKAITYSAMQINE-TQGDAEVFVIVDI 262
BLAST of mRNA_L-elsbetiae_contig1831.5306.1 vs. uniprot
Match: UPI0014558B37 (protein archease-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014558B37) HSP 1 Score: 145 bits (365), Expect = 4.940e-37 Identity = 82/165 (49.70%), Postives = 108/165 (65.45%), Query Frame = 1
Query: 529 GLEGGAGADGGAD---GANFEYLDHTADVQLHSWGDSVERAMEGAVAAMFNTITDIAKVDVDPSLTRVMEIEGHDAKSLLFSLLDEFLFLFHSEGLAVKRTTVKGTISRDSGPSPRWRLTATAEGETFDLSKHPQGTEVKAITYSNMQINEASDGRTDIYVIVDI 1014
G E GAD D G+ FE+LDHTADVQLHSWGD+++ + E AMF +T+I+KVD ++T +E EG D SLL+ LDEFLF+F ++ + R ++ D +++ AT GETFDL+KHPQGTEVKAITYSNMQ++ D DIYVI+DI
Sbjct: 37 GEEAAGGADDWQDIPEGSKFEFLDHTADVQLHSWGDTLKESFEYVALAMFAYMTEISKVDKLTTVT--IEAEGDDMLSLLYHFLDEFLFVFSADPFFIPRE-----VTIDELDLENFKIKATGHGETFDLTKHPQGTEVKAITYSNMQVHSEKDTH-DIYVIIDI 193
BLAST of mRNA_L-elsbetiae_contig1831.5306.1 vs. uniprot
Match: F2U008_SALR5 (Archease n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U008_SALR5) HSP 1 Score: 144 bits (362), Expect = 6.140e-37 Identity = 74/147 (50.34%), Postives = 100/147 (68.03%), Query Frame = 1
Query: 577 FEYLDHTADVQLHSWGDSVERAMEGAVAAMFNTITDIAKVDVDPSLTRVMEIEGHDAKSLLFSLLDEFLFLFHSEGLAV-KRTTVKGTISRDSGPSPRWRLTATAEGETFDLSKHPQGTEVKAITYSNMQINEASDGRTDIYVIVDI 1014
+EYLDHTAD+Q+H+WGDS++ + E V AMF +T++ KVD+D T +E+ G D SLLF+LLDEFLF F +E V KR + + D+ W++ GE FDL+KHPQGTE+KAITYSNMQI++ D+YVI+DI
Sbjct: 28 YEYLDHTADIQVHAWGDSLKESFEQCVVAMFGYMTELDKVDIDTEKTSELEVSGTDLLSLLFALLDEFLFRFSAEDFLVCKRVEI---VEFDT---TNWKIRVRGYGEPFDLAKHPQGTEIKAITYSNMQIHDDQPTH-DVYVILDI 167
BLAST of mRNA_L-elsbetiae_contig1831.5306.1 vs. uniprot
Match: A0A6L5DAT2_9INSE (Archease domain-containing protein n=1 Tax=Ephemera danica TaxID=1049336 RepID=A0A6L5DAT2_9INSE) HSP 1 Score: 142 bits (358), Expect = 2.290e-36 Identity = 73/152 (48.03%), Postives = 100/152 (65.79%), Query Frame = 1
Query: 577 FEYLDHTADVQLHSWGDSVERAMEGAVAAMFNTITDIAKVD------VDPSLTRVMEIEGHDAKSLLFSLLDEFLFLFHSEGLAVKRTTVKGTISRDSGPSPRWRLTATAEGETFDLSKHPQGTEVKAITYSNMQINEASDGRTDIYVIVDI 1014
+EYLDHTADVQLHSWG++V+ A E AMF +T++ V + + + +E EGHD SLLF LDE LF+F +E V R R++ W++ A + GE FD++KHPQGTEVKAITYSNMQ++E +G+T+++VIVDI
Sbjct: 21 YEYLDHTADVQLHSWGETVQEAFEQCGVAMFGYMTELEYVQNEYFNLLQMTTSHDIEAEGHDMLSLLFHFLDELLFMFCAEPFLVARKVKVLEFDREN-----WKMRARSYGEEFDIAKHPQGTEVKAITYSNMQVHEEPNGKTELFVIVDI 167
BLAST of mRNA_L-elsbetiae_contig1831.5306.1 vs. uniprot
Match: UPI0001CB979D (protein archease-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CB979D) HSP 1 Score: 142 bits (357), Expect = 3.000e-36 Identity = 76/149 (51.01%), Postives = 100/149 (67.11%), Query Frame = 1
Query: 568 GANFEYLDHTADVQLHSWGDSVERAMEGAVAAMFNTITDIAKVDVDPSLTRVMEIEGHDAKSLLFSLLDEFLFLFHSEGLAVKRTTVKGTISRDSGPSPRWRLTATAEGETFDLSKHPQGTEVKAITYSNMQINEASDGRTDIYVIVDI 1014
GA +EYLDHTADVQLHSWG ++E ++E V +MF +TDI V++ T+ +E EGHD SLL+ LLDEFLF+F +E + + R++ +++ A GETFDL KHPQGTEVKAITYSNMQ++E D YVI+DI
Sbjct: 25 GAGYEYLDHTADVQLHSWGSTLEESLEMVVQSMFGYMTDINTVEMTD--TQRIEAEGHDMISLLYQLLDEFLFVFSAEPFFIAKEVKIIEFDREN-----FKIVAEGYGETFDLDKHPQGTEVKAITYSNMQVHEEVP-TNDCYVIIDI 165
BLAST of mRNA_L-elsbetiae_contig1831.5306.1 vs. uniprot
Match: UPI0018D9AE20 (protein archease-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D9AE20) HSP 1 Score: 142 bits (358), Expect = 6.410e-36 Identity = 75/149 (50.34%), Postives = 102/149 (68.46%), Query Frame = 1
Query: 568 GANFEYLDHTADVQLHSWGDSVERAMEGAVAAMFNTITDIAKVDVDPSLTRVMEIEGHDAKSLLFSLLDEFLFLFHSEGLAVKRTTVKGTISRDSGPSPRWRLTATAEGETFDLSKHPQGTEVKAITYSNMQINEASDGRTDIYVIVDI 1014
G+ FE+LDHTADVQLHSWGD+++ + E AMF +T+I+KV+ T +E EG D SLL+ LDEFLF+F ++ + R I+ D +++ AT GETFDL+KHPQGTEVKAITYSNMQ+++ S + D+YVI+DI
Sbjct: 62 GSKFEFLDHTADVQLHSWGDTLKESFEQVAMAMFAYMTEISKVE--KLKTETIEAEGDDMLSLLYHFLDEFLFVFSADPFFIPRE-----ITIDEFDLENFKIKATGHGETFDLTKHPQGTEVKAITYSNMQVHKDSP-KHDVYVIIDI 202
BLAST of mRNA_L-elsbetiae_contig1831.5306.1 vs. uniprot
Match: A0A8J2LQB8_9HEXA (Hypothetical protein n=1 Tax=Allacma fusca TaxID=39272 RepID=A0A8J2LQB8_9HEXA) HSP 1 Score: 141 bits (356), Expect = 8.000e-36 Identity = 72/146 (49.32%), Postives = 100/146 (68.49%), Query Frame = 1
Query: 577 FEYLDHTADVQLHSWGDSVERAMEGAVAAMFNTITDIAKVDVDPSLTRVMEIEGHDAKSLLFSLLDEFLFLFHSEGLAVKRTTVKGTISRDSGPSPRWRLTATAEGETFDLSKHPQGTEVKAITYSNMQINEASDGRTDIYVIVDI 1014
+EYLDHTADVQLH+WGD++ A E AMF +TDI VD S ++ +GHD SLL+ LDEFLF+F ++ + R + R++ +++ AT GETFDL+KHPQGTEVKAITYSNMQ++E ++G +++VI+DI
Sbjct: 50 YEYLDHTADVQLHAWGDNLTEAFEQCAMAMFGYMTDIETVDNLGS--EQIQAQGHDLLSLLYGFLDEFLFIFSADPFFIARKVTINSFDREN-----FKIVATGFGETFDLNKHPQGTEVKAITYSNMQVHE-NEGYAEVFVIIDI 187
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Opisthokonta |
Seed ortholog score | 144.1 |
Seed ortholog evalue | 1.2e-31 |
Seed eggNOG ortholog | 946362.XP_004997297.1 |
Preferred name | ZBTB8OS |
Hectar predicted targeting category | other localisation |
GOs | GO:0000394,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006388,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0007275,GO:0007399,GO:0008033,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0010720,GO:0010975,GO:0010976,GO:0016070,GO:0022008,GO:0030154,GO:0031344,GO:0031346,GO:0031974,GO:0031981,GO:0032101,GO:0032103,GO:0032501,GO:0032502,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0046483,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048679,GO:0048680,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0051128,GO:0051130,GO:0051239,GO:0051240,GO:0051960,GO:0051962,GO:0060284,GO:0065007,GO:0070013,GO:0070570,GO:0070572,GO:0071704,GO:0072669,GO:0080134,GO:0080135,GO:0090304,GO:0120035,GO:1901360,GO:1903034,GO:1903036,GO:2000026 |
EggNOG free text desc. | tRNA splicing, via endonucleolytic cleavage and ligation |
EggNOG OGs | 39U2I@33154,COG1371@1,KOG4528@2759 |
COG Functional cat. | K |
Best tax level | Opisthokonta |
Best eggNOG OG | NA|NA|NA |
Exons | 8 |
Model size | 1587 |
Cds size | 1017 |
Stop | 1 |
Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815763.7612917-UTR-L-elsbetiae_contig1831:10809..11379 | 1622815763.7612917-UTR-L-elsbetiae_contig1831:10809..11379 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1831 10810..11379 - |
1691683086.9416537-UTR-L-elsbetiae_contig1831:10809..11379 | 1691683086.9416537-UTR-L-elsbetiae_contig1831:10809..11379 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1831 10810..11379 - |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815763.7729495-CDS-L-elsbetiae_contig1831:11379..11433 | 1622815763.7729495-CDS-L-elsbetiae_contig1831:11379..11433 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1831 11380..11433 - |
1691683086.9558353-CDS-L-elsbetiae_contig1831:11379..11433 | 1691683086.9558353-CDS-L-elsbetiae_contig1831:11379..11433 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1831 11380..11433 - |
1622815763.7831182-CDS-L-elsbetiae_contig1831:14085..14161 | 1622815763.7831182-CDS-L-elsbetiae_contig1831:14085..14161 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1831 14086..14161 - |
1691683086.9657633-CDS-L-elsbetiae_contig1831:14085..14161 | 1691683086.9657633-CDS-L-elsbetiae_contig1831:14085..14161 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1831 14086..14161 - |
1622815763.7998855-CDS-L-elsbetiae_contig1831:14565..14716 | 1622815763.7998855-CDS-L-elsbetiae_contig1831:14565..14716 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1831 14566..14716 - |
1691683086.980534-CDS-L-elsbetiae_contig1831:14565..14716 | 1691683086.980534-CDS-L-elsbetiae_contig1831:14565..14716 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1831 14566..14716 - |
1622815763.8144503-CDS-L-elsbetiae_contig1831:16828..16945 | 1622815763.8144503-CDS-L-elsbetiae_contig1831:16828..16945 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1831 16829..16945 - |
1691683086.9910588-CDS-L-elsbetiae_contig1831:16828..16945 | 1691683086.9910588-CDS-L-elsbetiae_contig1831:16828..16945 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1831 16829..16945 - |
1622815763.825256-CDS-L-elsbetiae_contig1831:17338..17374 | 1622815763.825256-CDS-L-elsbetiae_contig1831:17338..17374 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1831 17339..17374 - |
1691683087.0008345-CDS-L-elsbetiae_contig1831:17338..17374 | 1691683087.0008345-CDS-L-elsbetiae_contig1831:17338..17374 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1831 17339..17374 - |
1622815763.8393638-CDS-L-elsbetiae_contig1831:18038..18338 | 1622815763.8393638-CDS-L-elsbetiae_contig1831:18038..18338 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1831 18039..18338 - |
1691683087.010948-CDS-L-elsbetiae_contig1831:18038..18338 | 1691683087.010948-CDS-L-elsbetiae_contig1831:18038..18338 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1831 18039..18338 - |
1622815763.8571544-CDS-L-elsbetiae_contig1831:18563..18764 | 1622815763.8571544-CDS-L-elsbetiae_contig1831:18563..18764 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1831 18564..18764 - |
1691683087.019903-CDS-L-elsbetiae_contig1831:18563..18764 | 1691683087.019903-CDS-L-elsbetiae_contig1831:18563..18764 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1831 18564..18764 - |
1622815763.8703566-CDS-L-elsbetiae_contig1831:19235..19317 | 1622815763.8703566-CDS-L-elsbetiae_contig1831:19235..19317 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1831 19236..19317 - |
1691683087.02895-CDS-L-elsbetiae_contig1831:19235..19317 | 1691683087.02895-CDS-L-elsbetiae_contig1831:19235..19317 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1831 19236..19317 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1831.5306.1 >prot_L-elsbetiae_contig1831.5306.1 ID=prot_L-elsbetiae_contig1831.5306.1|Name=mRNA_L-elsbetiae_contig1831.5306.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=339bp
MSSGQWEALPQRRRKRRPTAAAATTPPDIPQPQQQQQQQQQQQHQNDTLP PAPTPPSGATGALATAEGAGGDPHHDQRQPSAASTSSASATCRGAATPAP APVPAAAPAAVPVVGSTGKAKQGGQAGEAGGKGDERGRGQGGNNAGSTPD AEAVAARHAAVATAVEARSKLTRFAGGLEGGAGADGGADGANFEYLDHTA DVQLHSWGDSVERAMEGAVAAMFNTITDIAKVDVDPSLTRVMEIEGHDAK SLLFSLLDEFLFLFHSEGLAVKRTTVKGTISRDSGPSPRWRLTATAEGET FDLSKHPQGTEVKAITYSNMQINEASDGRTDIYVIVDI* back to topmRNA from alignment at L-elsbetiae_contig1831:10810..19317- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig1831.5306.1 ID=mRNA_L-elsbetiae_contig1831.5306.1|Name=mRNA_L-elsbetiae_contig1831.5306.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8508bp|location=Sequence derived from alignment at L-elsbetiae_contig1831:10810..19317- (Laminarionema elsbetiae ELsaHSoW15) ATGTCCAGCGGCCAATGGGAAGCGCTTCCGCAGAGAAGGAGAAAACGGCG
GCCGACCGCTGCTGCTGCGACCACCCCACCAGGTGATGCACTGAGCCCCC
TCCCCCCCCCCCCCGCCCGCCCGCCCGCGACCAAAAAACTCTATTGTATG
CTTCCCCACCTTTTTATTCTGGTACAGACCCGCTTGCCACGCACCTGCCA
CTCGATTCCTTCCTTTTTCCGCTGCTTCGTCGTGCACAAGTACCGTCACT
CCTGTTCGCGACCGATCTGGCGATGGACATACATACATACACCCGCAACC
GTTCTGAAAGACGAGTTTCCACGGCGGGGTCTGCGGTAGTCATAGGCCTC
CCCCCGGCCTATGCCAGCCGTCGCATACCTGCATAAAAGCTCCTCTCGTA
AATAAGCGGCGCATCCTTTGGTAATTCAGCTCGTGTATCGTACCCGAGGA
CGCATCCCAACGCCCCCTTGTCATGTGTACCATACCTTTTTTCGGTCATG
CGTACCTTTTTTTGTCTCATTCTAACCTTCACCTTTCGTCACGGTCGCGC
TAGATATTCCGCAGCCTCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAA
CATCAGAATGATACGCTGCCACCAGCACCGACACCGCCATCAGGTGCAAC
GGGAGCACTAGCAACAGCCGAGGGCGCCGGCGGTGACCCCCACCACGACC
AGCGCCAACCCTCTGCTGCTAGTACTAGTAGCGCGAGCGCAACCTGTAGA
GGGGGTAACCCCGCCAGTGCTTCCGACTCGGAGAACAGAGATGCGAGGGG
AAGCAGGACTCCTCCACAACAGCAACCACGCAAACAGCCTTGCGAAGGCG
GTGCTGCCGCTGACCGGACCAGCGGTGTGCCACCGGCCGGCGACGACAAA
GCCCAGCGGATTGTAGGCGACGGCGGCGGCGGTGTTGAGGGACTCGCAGG
CAACGTTCCCTCGTCAGCTATATCAACAGCAGCGACACCGGCACCGGCAC
CAGTACCAGCGGCGGCGCCGGCGGCGGTGCCGGTGGTTGGCAGCACAGGA
AAGGCGAAACAGGGCGGCCAAGCAGGCGAAGCAGGCGGAAAAGGAGACGA
GCGGGGGCGAGGGCAAGGCGGCAACAACGCTGGCAGCACGCCGGACGCGG
AGGCGGTAGCGGCCCGACACGCGGCGGTGGCGACGGCGGTAGAGGCGAGG
TCCAAGTTGACACGGTTCGCGGGGGGGCTGGAGGGTGGCGCAGGGGCCGA
CGGCGGCGCGGACGGGGCCAACTTCGAGTGTGAGTTGTACCGATCGTGTG
GGGGGTTCGGTGTGTATCCTCGTTGCGGGGGGCGGGGGACTGATGGGGGG
GGTGGGGTTCGCCGCGATTCAAATCATGATTTCTTTGATCGCTGTTTGGT
TTTGGACATCAAGTCCGTGGTCTATCGTACCGCGCACGTGACCAGCTCTT
CCGCACGCCGGGAACGAAACGAGGCACCGGATGAGACAGCTGATTCCCTC
CCGCGATTGGAACGGCAAGTTGCCGAAGGAATCGTTCACACCTATACATA
TACATATCCACTCTGATCCGTTGACCGCTGGCACCGGATGAGACAGCTGA
TTTCCTCCCGCGATTCGAACGGCAAGTGGCCGAAGGAGTCGTTCACACCT
ATATGCATATCCGCTCTGATCCGTTGACCGCTGTGGCGCCTACAGCCAGT
TGGCAGCACCCTATCTTTGCGTTGATGCTATGTACGGAGAACCGCTCTGT
TGCTGCCTTGGATGTTGCGGGCGCGGTCCCGGGCTGCTGGCGGTGACATC
GGTGTTTAGCTGCTCGCGGCCGCCTTTCGTGCTGGTCTGGTTTGCCCCTC
CGTGCCCATAATTGTTATCTCGTTCCCGGTTGTTCTCCGAACGTTTTTGC
TTCCTGCCCTGCGCTCCCTCTCCTCCTCCCTCGCTCTCGTCAGACTTGGA
CCACACCGCCGATGTCCAGCTCCACAGCTGTAAGTGTGGTGTACATACCA
TGACGAGTGTTGATTTTAGTGCATTCATTGTTGATGGGAAAGAGTCAAGT
AAATAGAGCTCTTCGGTCTAGCAGAGCAGTAACTTCCTCCATGTCACGTA
CCTACGTGCCTTCATGCATACGAGCTCCCCATCTACATCTTACTTAGCTG
GCTACCGGTACGTAGGAGGCTCGCGGGTGCGGGGGTAATGAGCCATTGCG
CGTGGCTGTACTGTGAAACCTCTATATACACGCAAGAGGTCTTGTGTAAC
GCCGAATGCTTTGAAACCAACGAGGAAAACGAGACCGAAAAGATCCAGAT
TTTTCGATGAATCCGGGGCTCTTAAGCTTAAGACCGACCCCCGTCGGCTC
GACACCGAAAACCAACTTCCAGGGGGGGACAGCGTCGAGAGGGCAATGGA
GGGGGCCGTTGCTGCGATGTTCAACACCATCACGGACATCGCAAAGGTTG
ACGTGGACCCGTCGCTCACGAGAGTGATGGAGATCGAAGGTGAGGTTACA
GACTCAGGGCTATGCAGGCGAAACAACGAAAAGCCGTCGCTCTGTCGTGT
ACCGCGGCTTGAGGGACACAAAATACAGATACAGAAGAGGCATCGTTTGT
TGTTGCAGATGTGAAAACGATATTTGGGTTATGTACCATGGCTTCAGGAA
TGCAAGACACAGAGAGGCATATTTTTTGTTGCAGATGTGGACGATTTTTG
GGTTATGTCCTGTGACTTCAGGGATGCACAATACAGATTCAGAGAGGCAA
CGTTTTTGCTGCAGATGTGCGAGCGTTTCTTGGGGTTTGTCCCGCTGCTT
CAGGGACGCAAAATGCAGATAGAGAGAGGGATCGTTTTTGTTGCAGATTT
GAAAGATTTTGGGGTTATGTACCGCGACTTCAGGGATGCAAAATACAGAT
ACAGAGAGGCATCGTTTTTGCTGCAGATGTGCGAGCGTTTCTTGGGTTGC
TGCTCATTGTGCGAGGTGGGTGGGGAGAGGTCGGGGAGGAGGCGCATGGT
CATCACGAAGCGCGGGGCCGGGTCGTAGGTGGCCGTGGCCCTGCAAAGCC
GGGACAGGATGTTACCTTTCGGGTTTGTGTCGACCATATGTTGGTTGTTG
TTGTTGTTGTTGTTGTTGTTTCTCACATTAGCTCTCTAGTCCAAAACATC
CTTGGGGGCCCGTGGTCACAAAACAAGGCACACTCGACGCCGCGCAAGAA
AAATAAGAACAAATATGGTGCATACGCGCCCGGTGGTACTAAACTGGACC
CCGGGGGGTCTTGCGTCTTCGCCAGCACAAAACCAAAGGTATAGTTCATA
CTATTCTGAAGAGAAAATAAAAGAAAGTTCGAAAAAGCAAATAAAATACC
ATATACCACGCCAGGGGGGGGAAGAGAGCTACAGACAGCCGAAGGCTTCC
CGCACCAGAAGGAGGCAGGAAAAAAGGCCGGGAGGCGGAGGTCCGCGAGC
CAAAATACGAAATATGTACTCGGGGGCCAAGAGCCATCCCCCAAACCGAT
GATCTTGCGGGGGAAAGTATCGACCACGCTGGTCGCCGACGGCCAGCTGT
ACTGACTGCTCCGCGAATTTTCACGGGTTCTGACGACGATGTGCGGTGAC
AATCAAGCCCATCCGCTCTGCTTCCCGGCATATTCAGCGGGCACTGCCAT
AATACCTGGCGTTTCCATACTTCAACTCCTAGCGTGTCCATACCCCGAAG
GGTGTGCGTATTGGGCGGAGTGATGCCGGGTTTGGTGGTGGTGGATCGGG
TTGGCTTCTTTTGCATCGGCCGATATTCCGTGCACATCCTTAATTAAATA
CATACGCTCTGCATTTTGGTCTTGTGTTGCACCCTTGTTTCGTCCACGGA
CTACGGGTTCATGCGGCGGTGTTGGTCAATCACCTTGACGGTATCGCTGA
AATTTTCTGTCCTTCGAAGAAAATGGTTCGACACGGCACGGTTGCCTCAA
AAAGCATCTTGCGCTGCTGTTCGCGTACCCTTTTGTAGCATGAAAAAATG
TTGTGCAAATATCAGCAGCAGTTTTTGTGTTTTCTGGCCACGTTTTCGCA
TCCGCTGCTGTTGACGGCTCGATGCGTGTGGCAGTCGGTTTCGGCAGGCC
GCGCCCACAGCACCCCTCCGTTTTTTCGCCGCGCTTTTGAACGGCCACAA
CTCGGCAGTCGTGTGCTGTCTTTAAATCATACTTCTACATCGTTTACCGA
CGTGTGGTGTGGTGTTGTATGATGCTGCTTGGCAAGAAAGCCAATTGATC
AAAAACAGAACCTAACCCACATCAGAGACGAGACTCCGTGGGGTTAATTC
AACCGGTATTCCATCTACGTATGTACGTAAATAATAGTGACGAAATTCTC
AAACCCATTTTTGGTTTTAGTCCTTCTCGAACCAAACAGTTCAATCCTAA
AAGGCTAAACCCGCCAAGTTTTTGGCACAAAACCCGCCGCGTTTTGATTT
TTTTTTTTTTTCAGAAATATTTATATAGATACTTCGTATATTTATACTGG
TCCGGCCGAGTAGAAAAAACACCTAAAGTGTCTGAACATTTAATTAGACT
TGCCCCCCCTGCAAAAATATGGTGGGGTGATGTTTGTTACCGTCTGCGCA
GGCCACGATGCCAAGTCCCTGCTGTTCTCCCTCCTGGACGAGTTCTTGTT
CCTTTTCCACTCGGAGGGCCTGGCGGTGAAGAGGACCACCGTCAAGGGCA
CCATCAGCCGAGATAGCGGCCCCAGCCCGCGCTGGAGGCTTACAGCAACG
GCGTAAGCAGCTGCCCTTCTTTTTTAGTTTTTTTTTTTTTTTAGCGGTTC
CTGCATATTTAGCTCGCGCTGAGTGGAGGCTTTGGGAGGCAACGGCGTAA
GCAGCAGTTATCCTGCGGCGTTTCCATGCTCGTCTCGTTGCTCCTAGCCC
GCGCTGAGTGGATGGAGGCTTTTGAACAACGGCACGAGCAGCAGCGTACG
GTTCCGGCCTTCCGCGTTCGTGATATTTTGTGTTTGTTCTTGCTGTTCTA
GGTGCGCCACAGCCACCTCGGCTACACGCTCTCTCCTCTATCCCCAGTCC
CGTGCTCCTTGTACCTTTTCCCGACATCATTGTACATTTCCCCGACATCC
TTGTACTATTTCCCGACACCCCCCCTCCATCCGCGAACCGCAACTCGGCT
CAACAGGGAGGGGGAGACGTTCGACTTGTCAAAGCATCCGCAGGGGACAG
AGGTCAAGGCTATCACCTACTCCAACATGCAGGTAATTGGTGACCCTAAT
CCCAAGACAGAGGTGAAGGTCAAGGCTGTCACCTACTCCGATACGCAGCT
ATTTAGTTGGTAATAGAGGTCAAGGCTATCACCTGCTCCAATGTGCAGGT
AGCCAGTGACACTTTTGGCTTGTTTGTTTTGGCCTATGTATGATGAACCA
CCTGGGGCAGCCCCAGCCTCGTCTAAATCCCCCGTCCTGTCCTGTTTTCG
AATGAGAGATTTATAAAGTAAAAAATCACCTGGGCCTCGTCGGAGTACCC
TTCCTTCCTTTGATGTAGGAGCCGACAAGGGTGTGGGGGAAGTAATATGA
GAAGGAGAGACAAGAGAGGCCAGGGAGTATCTTTGGTGCACCAATACACA
GCAGACAGGCGCTCAGGTGTGTCCTGCGGAGGGGCTCCGTCATTTCCAGG
AACGACTGATGAAATTATGCAAATGAAAAGCACATATCATACTTGGTGCC
GGGGCACAGGCTCTCGTGATGATGAAAAAACCAGTGAGTGCAATTAACGG
AGAGCACCCCCCCCCGCCCGTCAGCTATTTTGGCTGCCCCCCCCCCCCCC
CCCCCCCCCCCCCACGGCCCGCCAACAAAACACCCGGCGCGGGCGCNNNN
NNNNNNAAAAGCGGGGGTGTGCATGCGGGCGCGCCCCCCCCCCCCCCCCC
CAGCGTTTGTTGTCGCCCCCCCCCCCCCCCCCCCCCATATCATGAGAGCC
GAAAACAAAACAGCGGCGCGGGGCGCAGGCGTTGCTCGACACGCGAAGAG
TAATGCGGGGGGGGGAGCCCCACTAGTCACAGCCTGCACCCATCGTATAC
CACAAACGATGCAGGAGTGGCTGCTCTACAGCAGTGGGAACCTCTGCGGA
GTTCGAGGCGAGAAAGAAACACAACCACATCTGCTGCAGATGCCCCCAAA
AAACAAAACCGCACACTGCATGCTCTGCAAGCTCTCGCGCTTTGAGTTTA
CATCGCCACCACGCGCTCTTGCGTTTGGGAAACCTCACCCGGACGCCCTT
TGTGGTACGAAGACAGGTGTAGGAGGAGCTCTATCTATATGCTTGCTTGC
CACCTCCACATCATGGGTGTGAAATTGGCCACTCGTGCGCGCTAGTTGAA
AAACAAAAAATCAAACCCGATTTATGGGCGTGCCACCACCGAAGTCGAGC
AGGCGTGCACAACGTCGTGATTTTCTCCAAATCATCTCCAACGATTTCTG
TGTACGTAACTCACATGATGGACGGCAGCCTTAGCTACGGCGTCAGCGGC
TCGCGCGCGTGCTCCAATGAATAAGCATCGATGAAGCGGGATTTGACCGG
GATTTGGGGTGGTCCGTCGAGGCTGTGCTCTGTCTCCCGCGGCCGTCGGC
GGCGAGAGAGGAAGTTAGGGGGGGCATAAACTCGAGGCCCACATGCGTTC
ACTGGCGAAATTAGACGTCCGTTGGTTGCGTAAGCGGCAAAAAAAACGGG
ATGACGCGTTTTTGATCAAATATTCTCTAAATGTACGCTCTAAAAACGTG
GCGGATTGACAGGTTAGATTTTTTTCGAAGGACTAGAGAAAGCTAAACGC
CATTAAAGTGGATTTAGAATGGATCCTCCGCCGCAACGAAAGCCTGCAGA
CTCCAAGTGCCCAATTTCTGTGAGCTTCCCCCCCGCCCCTGGCGCTCGGC
ATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTATCCCATTTATCCGG
GCGTCTGTCCACACGTTTTGGTGCATTATCTGTCCAGCGAGACTTATCTG
CCGGGATCATACAGAAAGGGGGTAAATAAACACGGGGGATTTGTTTCTTC
TTTTTCTTTTTCTTTTTCTTTTCTTTTTTGCCACACCTTTCCTCCTGCGG
TGCTCGCCTTTGATTTTTCATCGCGAGTAGGGCTCGGCCGTCCCTCCCCC
TCGTCAACGGTTAAGTCGAAGTTTTATTTACTCACGACGAGCATTTGGCT
TTTTTCGCTTTCTAACGCAAAAGTCGCAAATTTTCAATTTTTTACCCCCG
GAGAGTTTCGAACTCACGACTTTGCTGCTATTTTATTTTTTCTTCTTCAC
ATTTATTTCAAGCGCTCGATGGGCTCCCTGTCACGAGGACATCTCGCCAG
AGTACTGAACCGTGGTGTCACAGAAGGGTTCCTTTCCCCAAGGCCCTCAC
TTCCCCCGTCTGCGGTGCTTGCCTAAGATGTACTATTATATTTACCGGGT
TTCGAAGTTAACCACTATTTAGACCACCGGGGGCGACAAGATTGATTGCT
CGGTGCAGAAGAAGGCTTGGGCGTCATAACATAGCGATAAACAAGATTCC
CTTTCAAGCTACTGCTGACGTGAGCACATATACGTATCTAGTCCGTGCAA
CAAAGGTTCAGCCAGTCAGATGTAACCCCAGAACCTTCTAGAAGACTGGA
CACAGTCTGCGGAGATAAACGGCGGGATAACCGCTGTATCCTATCATGCC
GCCCCACACACCAACACCTCACTAGCATATTGGCACTTGCGCACGCACAC
ATGGGCGTTTTCTGAACCTCCCCGCCCGCGAAAATGAAGAATCCTGTGTG
TCACCCCCTGCCCCCCCCGCCTCTCTCTCTCCCTCTCTCTCTATATATCT
CTCTCTCTCTCTCATCCGATATTCCCTCTTCCAGATCAATGAAGCTTCAG
ATGGCCGCACTGATATCTACGTGATCGTGGACATCTGACTGCATTATGGG
AGAGAACTGGGTGGCCGGTCGCGTGCTTGTCGTTGTCATCGTCTACATCG
GGTGCTCCACCTTCAGCAAAGATGCGAATTAGGAAACACAAGGCTGTCAC
TATGACCTATGAACACGCATGTACGTAGCACCTATGCGCAACAACCAACC
TCGTTTTGACAAGCAGATATCTGTGTGCGCATACGTATTGTCCCGGACCA
CGGGACGTCGACATCTGCTGCCCGAGGAAGCCCTGCATTTGCGCCGCGTG
GTGGTTTTGAGGGCGCCACCTGGGTGTGCGCAGCAGCGAAGGCCGGGATG
ACCCCATGCTCTATACACTTCGGCGTGACAGAAAATAGTGTGGGGTGAGT
TGATGTCGTACAGAAGGACGCAGCGAGGCATGGGTCCTTCGCTGATACAT
AAGAAGAGGAAACCCGACGGAAGTGGAGCATGCTTGTGGAGGTACATATG
TAGGTGTCTACAGCTCGGAGACAAGCGTGGTCGTTTCCAAATCTCAACCC
GGGGGATAGTAGGGACAGACAGGGACAGGGCCAAGGGCGAAAACACGAGA
GAGGTTGC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig1831:10810..19317- >mRNA_L-elsbetiae_contig1831.5306.1 ID=mRNA_L-elsbetiae_contig1831.5306.1|Name=mRNA_L-elsbetiae_contig1831.5306.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2034bp|location=Sequence derived from alignment at L-elsbetiae_contig1831:10810..19317- (Laminarionema elsbetiae ELsaHSoW15) ATGTCCAGCGGCCAATGGGAAGCGCTTCCGCAGAGAAGGAGAAAACGGCG GCCGACCGCTGCTGCTGCGACCACCCCACCAGATGTCCAGCGGCCAATGG GAAGCGCTTCCGCAGAGAAGGAGAAAACGGCGGCCGACCGCTGCTGCTGC GACCACCCCACCAGATATTCCGCAGCCTCAGCAGCAGCAGCAGCAGCAGC AGCAGCAGCAACATCAGAATGATACGCTGCCACCAGCACCGACACCGCCA TCAGGTGCAACGGGAGCACTAGCAACAGCCGAGGGCGCCGGCGGTGACCC CCACCACGACCAGCGCCAACCCTCTGCTGCTAGTACTAGTAGCGCGAGCG CAACCTGTAGAGGGGATATTCCGCAGCCTCAGCAGCAGCAGCAGCAGCAG CAGCAGCAGCAACATCAGAATGATACGCTGCCACCAGCACCGACACCGCC ATCAGGTGCAACGGGAGCACTAGCAACAGCCGAGGGCGCCGGCGGTGACC CCCACCACGACCAGCGCCAACCCTCTGCTGCTAGTACTAGTAGCGCGAGC GCAACCTGTAGAGGGGCAGCGACACCGGCACCGGCACCAGTACCAGCGGC GGCGCCGGCGGCGGTGCCGGTGGTTGGCAGCACAGGAAAGGCGAAACAGG GCGGCCAAGCAGGCGAAGCAGGCGGAAAAGGAGACGAGCGGGGGCGAGGG CAAGGCGGCAACAACGCTGGCAGCACGCCGGACGCGGAGGCGGTAGCGGC CCGACACGCGGCGGTGGCGACGGCGGTAGAGGCGAGGTCCAAGTTGACAC GGTTCGCGGGGGGGCTGGAGGGTGGCGCAGGGGCCGACGGCGGCGCGGAC GGGGCCAACTTCGAGTCAGCGACACCGGCACCGGCACCAGTACCAGCGGC GGCGCCGGCGGCGGTGCCGGTGGTTGGCAGCACAGGAAAGGCGAAACAGG GCGGCCAAGCAGGCGAAGCAGGCGGAAAAGGAGACGAGCGGGGGCGAGGG CAAGGCGGCAACAACGCTGGCAGCACGCCGGACGCGGAGGCGGTAGCGGC CCGACACGCGGCGGTGGCGACGGCGGTAGAGGCGAGGTCCAAGTTGACAC GGTTCGCGGGGGGGCTGGAGGGTGGCGCAGGGGCCGACGGCGGCGCGGAC GGGGCCAACTTCGAGTACTTGGACCACACCGCCGATGTCCAGCTCCACAG CTACTTGGACCACACCGCCGATGTCCAGCTCCACAGCTGGGGGGACAGCG TCGAGAGGGCAATGGAGGGGGCCGTTGCTGCGATGTTCAACACCATCACG GACATCGCAAAGGTTGACGTGGACCCGTCGCTCACGAGAGTGATGGAGAT CGAAGGGGGGGACAGCGTCGAGAGGGCAATGGAGGGGGCCGTTGCTGCGA TGTTCAACACCATCACGGACATCGCAAAGGTTGACGTGGACCCGTCGCTC ACGAGAGTGATGGAGATCGAAGGCCACGATGCCAAGTCCCTGCTGTTCTC CCTCCTGGACGAGTTCTTGTTCCTTTTCCACTCGGAGGGCCTGGCGGTGA AGAGGACCACCGTCAAGGGCACCATCAGCCGAGATAGCGGCCCCAGCCCG CGCTGGAGGCTTACAGCAACGGCGCCACGATGCCAAGTCCCTGCTGTTCT CCCTCCTGGACGAGTTCTTGTTCCTTTTCCACTCGGAGGGCCTGGCGGTG AAGAGGACCACCGTCAAGGGCACCATCAGCCGAGATAGCGGCCCCAGCCC GCGCTGGAGGCTTACAGCAACGGCGGAGGGGGAGACGTTCGACTTGTCAA AGCATCCGCAGGGGACAGAGGTCAAGGCTATCACCTACTCCAACATGCAG GGAGGGGGAGACGTTCGACTTGTCAAAGCATCCGCAGGGGACAGAGGTCA AGGCTATCACCTACTCCAACATGCAGATCAATGAAGCTTCAGATGGCCGC ACTGATATCTACGTGATCGTGGACATCTGAATCAATGAAGCTTCAGATGG CCGCACTGATATCTACGTGATCGTGGACATCTGA back to top
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