mRNA_L-elsbetiae_contig183.5302.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig183.5302.1 vs. uniprot
Match: D8LKG0_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKG0_ECTSI) HSP 1 Score: 577 bits (1486), Expect = 7.600e-202 Identity = 287/382 (75.13%), Postives = 310/382 (81.15%), Query Frame = 3 Query: 396 LPHEVSDAVGSAGSAYIWPTTLDGRPSRLERWDVLKARYAQYPYREHFATGEAWRLEHPEFEPKLCFYAFDTPVEH--KYWVEEAEAPFRCRLQRDGLKFSRDISTWEARAPVKPKNSNGRGEEEAADEITGENERWTSGSGGGGSDVDGAR--GAEGGGG--------------------ASFFAFPLVVHNSHAHHVDWTSGPDRYQVTQETEPEWGWTRLFTFFAYAASKYHVLETTDAPLAQKIVKGNFLTPERGWKCVLAFFAFDNDVPGSNRYFIEEKDEPHLRTRVGMEASCRWEARHTFAAFDVPVPGSSALDVHYTVRSTDSLNPYPEQCRISLKDPWGAWEQKFRFYAFPAEHVLLSPDLECLDAQESSSGS 1469 +P EVS+AVG AGSA+IWP T+DGRPSRLERWDVLKA PYREHF+TGEAWRLEHPEFEPKLCFYAFDT VEH +YWVEEAEAPFRCRLQRDGLKFSRDI+TWEARAP K KN N +G SG G G D+DG G EG GG A FFAFPLVVHNSHAHHVDWTSGPDRYQ+TQ++EPEWGWTRLFTFFAYAASKYHVLETT APLAQKIVKGNFLTPE GWKCVLAFFAF++ VPGSNRY+IEEKDEPHLRTR+GMEASCRW+ARH+FAAFDVPVPGS ALDVHYT+RSTDSLNPYPEQCRISLKDPWG+WEQKFRFYAFPAE VLLSP+L+ D Q+ SGS Sbjct: 86 VPQEVSEAVGRAGSAHIWPRTVDGRPSRLERWDVLKA---SDPYREHFSTGEAWRLEHPEFEPKLCFYAFDTAVEHVERYWVEEAEAPFRCRLQRDGLKFSRDIATWEARAPAK-KNDNDKG---------------NSGVGSPGGDLDGDEHWGGEGVGGDGRXXXXXXXXXXXXXXXXGAGFFAFPLVVHNSHAHHVDWTSGPDRYQITQDSEPEWGWTRLFTFFAYAASKYHVLETTQAPLAQKIVKGNFLTPEPGWKCVLAFFAFNDMVPGSNRYYIEEKDEPHLRTRIGMEASCRWDARHSFAAFDVPVPGSCALDVHYTIRSTDSLNPYPEQCRISLKDPWGSWEQKFRFYAFPAEQVLLSPELDS-DTQDVLSGS 447
BLAST of mRNA_L-elsbetiae_contig183.5302.1 vs. uniprot
Match: A0A836CAN8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAN8_9STRA) HSP 1 Score: 195 bits (495), Expect = 1.270e-56 Identity = 88/168 (52.38%), Postives = 116/168 (69.05%), Query Frame = 3 Query: 918 VDWTSGPDRYQVTQETEPEWGWTRLFTFFAYAASKYHVLETTDAPLAQKIVKGNFLTPERGWKCVLAFFAFDNDVPGSNRYFIEEKDEPHLRTRVGMEASCRWEARHTFAAFDVPVPGSSALDVHYTVRSTDSLNPYPEQCRISLKDPWGAWEQKFRFYAFPAEHVLL 1421 +DWTSGPDRY V+ EP WGWTR+FT A+A SKYH+LE D P + +IVKG + PER W+C AFFAFD VPGS + F++ + EPH+R+RV + S RWE + F +P+P ++ +VHYTVRS +SL+ +PEQ RI L +P WE K FYA+P+ VLL Sbjct: 1 MDWTSGPDRYCVSVGDEPSWGWTRVFTMHAFAVSKYHLLERLDPP-SYRIVKGTHIKPERDWRCCFAFFAFDGPVPGSTQLFVQMRGEPHIRSRVALTHSERWEDHLSMYVFCMPMPNTAQFNVHYTVRSAESLDAFPEQDRIHLGEPRDRWELKLTFYAYPSPVVLL 167
BLAST of mRNA_L-elsbetiae_contig183.5302.1 vs. uniprot
Match: A0A7S3Y5K5_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5K5_HETAK) HSP 1 Score: 195 bits (495), Expect = 8.810e-55 Identity = 116/327 (35.47%), Postives = 156/327 (47.71%), Query Frame = 3 Query: 477 RLERWDVLKARYAQYPYREHFATGEAWRLEHPEFEPKLCFYAFDTPVEHK--YWVEEAEAPFRCRLQRDGLKFSRDISTWEARAPVKPKNSNGRGEEEAADEITGENERWTSGSGGGGSDVDGARGAEGGGGASFFAFPLVVHNSHAHHVDWTSGPDRYQVTQETEPEWGWTRLFTFFAYAASKYHVLETT-DAPLAQ-------KIVKGNFLTPERGWKCVLAFFAFDNDVPGSNRYFIEEKDEPHLRTRVGMEASCRWEARHTFAAFDVPVP--GSSALDVHYTVRSTDSLNPYPEQCRISLKDPWGAWEQKFRFYAFPAEHVLL 1421 +LER +VL+ PYR+ F EA ++ F FYAF V H VE AP R R +R + F RDI+ W K F+A+P ++ HVDW+SGPDRY ++Q+ P GW R F F+AY ASKYHVLE D A+ KIVKG+++ E GW+C F+ D+ PG+N Y +++++EP RTR+G+E + W G+S + VHY +RSTDS + YP+Q RI+L P GAWE F FYAFPA V L Sbjct: 23 KLERINVLEPLSQPEPYRQRFTRQEADEVDWSTF---ATFYAFAEAVPHADPVAVEAHPAPRRHRARRPRITFPRDITKWNESKKDK-----------------------------------------------FYAYPQTYQGTNEFHVDWSSGPDRYMISQDGLPRMGWKRQFQFYAYGASKYHVLEKVLDMATARPGERPGYKIVKGHYIPAEPGWRCRFGFYGLDDPAPGANLYHVQDQEEPFYRTRIGLERATHWXXXXXXXXXXXXXXXHGTSKVSVHYMIRSTDSEDVYPDQHRITLGLPSGAWEHLFDFYAFPAPSVQL 299
BLAST of mRNA_L-elsbetiae_contig183.5302.1 vs. uniprot
Match: A0A7S4E3X4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E3X4_9STRA) HSP 1 Score: 149 bits (377), Expect = 2.890e-36 Identity = 80/193 (41.45%), Postives = 109/193 (56.48%), Query Frame = 3 Query: 870 SFFAFPLVVHNSHAHHVDWTSGPDRYQVTQETEPEWGWTRLFTFFAYAASKYHVLET-----TDAPLAQKIVKGNFLTPERGWKCVLAFFAFDNDVPGSNRYFIEEKDEPHLRTRVGMEASCR---WEARHT-FAAFDVPVPGSSALDVHYTVRSTDSLNPYPEQCRISLKDPWGAWEQKFRFYAFPAEHVLL 1421 SFFA P H+DWTS PDRY V+ E P W R F FFAY A+K+H+LE ++ + ++V G+ W+C+ AFFAFD+ VP +N+Y I++ + + R RVGM AS R W+ F A+DVPVPG++ V Y VR D N EQ R+S+ G W +KF FY +PA + L Sbjct: 265 SFFALPEPQPGLSEFHIDWTSAPDRYMVSTEYRPAAAWLRCFRFFAYKATKFHLLERVWPHGSELTTSYRLVAGHECPVNAHWRCLFAFFAFDSCVPNANQYTIQQSVDGYDRLRVGMTASIRPGEWDPNDLKFYAYDVPVPGTAKFSVQYRVR--DGTNMECEQNRLSIDHAVGPWVEKFVFYGYPAPTIEL 455
BLAST of mRNA_L-elsbetiae_contig183.5302.1 vs. uniprot
Match: A0A7S3K3X8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K3X8_9STRA) HSP 1 Score: 137 bits (344), Expect = 3.770e-32 Identity = 108/353 (30.59%), Postives = 159/353 (45.04%), Query Frame = 3 Query: 480 LERWDVLKARYAQYPYREHFATGEAWRLEHPEFEPKLCFYAFD------TPVEHKYWVEEAEAPFRCRLQRDGLKFS--RDISTWEARAPVKPKNSNGRGEEEAADEITGENERWTSGSGGGGSDVDGARGAEGGGGASFFAFPLVVHNSHAHHVDWTSGPDRYQVTQ--ETEPEWGWTRLFTFFAYAASKYHVLET---TDAPLAQ--KIVKGNFLTPERGWKCVLAFFAFDNDVPGSNRYFIEE--KDEPHLRTRVGME-ASCR-WEARHTFAAF--DVPVPGSSALDVHYTVRSTDSLNPYPEQCRISLKD---PWGA---WEQKFRFYAFPAEHVLLSPDLECLDAQES 1457 L R ++ K+ ++ PYRE F W ++ L Y F +Y +E AE P R RL+ DG + RD + W+A +G N+ W AFP N+ VDWTSGPDRY++ + E+ PE GW R F FFAY A+KYH+L + AP++ +I+ G+ +R W+C AFFA D PG+N+YFI++ + E + R R+GM A C W+ F + D+P P ++ +V Y +R EQ R+++ D P W KF + +PA + L PD L Q+S Sbjct: 48 LIRLNIQKS--SRPPYRERFC----WNDADDRWQASLYLYVFPHLPPGLEQCLRRYVLERAENPIRSRLRWDGQQKPQRRDATEWKALR-------------------SGRNDFW--------------------------AFPERTANAQELAVDWTSGPDRYRIIRHPESRPEAGWLRCFRFFAYPATKYHILYRDWPSGAPVSTSYRIISGHLCPVQRPWRCAFAFFALDEQAPGTNKYFIQKTPQSEYYPRIRIGMTPAQCGGWDPHDQFIFYAPDMPWPCTAKFNVQYKMRGGPDAEL--EQNRLAIADILAPHACGSLWTDKFAIFLYPAPTIDLEPDDWDLQPQQS 347
BLAST of mRNA_L-elsbetiae_contig183.5302.1 vs. uniprot
Match: A0A7S2S6V9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S6V9_9STRA) HSP 1 Score: 137 bits (346), Expect = 4.750e-32 Identity = 69/198 (34.85%), Postives = 99/198 (50.00%), Query Frame = 3 Query: 873 FFAFPLVVHNSHAHHVDWTSGPDRYQV-TQETEPEWGWTRLFTFFAYAASKYHVLETTDAP--------------LAQKIVKGNFLTPERGWKCVLAFFAFDNDVPGSNRYFIEEKDEPHLRTRVGMEASC--RWEARHTFAAFDVPVPGSSALDVHYTVRSTDSLNPYPEQCRISLKDPWGAWEQKFRFYAFPAEHV 1415 F+ +P +H + +DW+S PDRY++ T E GW R F A+AASKYH+LE + L+ +I KGNF ++GW+C+ AF+AFDN PG++RY+ + K +P+ RVG E + WE V Y + DS PEQ R+ D W W +K FYA+PA + Sbjct: 257 FYVYPAPMHGTSPFFLDWSSAPDRYKISTSIASSELGWLRCLRFEAFAASKYHILEGSFVDESMEASMSVGAIPRLSYRIHKGNFCPCDQGWRCIFAFYAFDNPGPGTSRYYCQHKVDPYYTIRVGKEPTYIHDWEDYAXXXXXXXXXXXXXXFSVDYVTQDVDSRTDTPEQSRVFFHDTWEPWVEKLHFYAYPAPSI 454
BLAST of mRNA_L-elsbetiae_contig183.5302.1 vs. uniprot
Match: A0A7S2AWR6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AWR6_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 4.550e-16 Identity = 39/112 (34.82%), Postives = 56/112 (50.00%), Query Frame = 3 Query: 1092 ERGWKCVLAFFAFDNDVPGSNRYFIEEKDEPHLRTRVGMEASC--RWEARHTFAAFDVPVPGSSALDVHYTVRSTDSLNPYPEQCRISLKDPWGAWEQKFRFYAFPAEHVLL 1421 E GW+C+ AF+AFD +PG+ RY+++E+ EPH R RVG E + VH+ +S ++ EQ RI D W W+QK FYA+ A +L Sbjct: 3 EEGWRCLFAFYAFDEMIPGTTRYYVQEQFEPHQRIRVGQEPTYFHGXXXXXXXXXXXXXXXXXXXFSVHFLTQSPETRTAVAEQSRIFFGDAWEPWQQKCNFYAYAAPTMLF 114 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig183.5302.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig183.5302.1 >prot_L-elsbetiae_contig183.5302.1 ID=prot_L-elsbetiae_contig183.5302.1|Name=mRNA_L-elsbetiae_contig183.5302.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=131bp MQYEDSTGCLWTEEQDADGYVYYVNTSTMETAWELPPSIREVVSSALVPLback to top mRNA from alignment at L-elsbetiae_contig183:34626..41238- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig183.5302.1 ID=mRNA_L-elsbetiae_contig183.5302.1|Name=mRNA_L-elsbetiae_contig183.5302.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6613bp|location=Sequence derived from alignment at L-elsbetiae_contig183:34626..41238- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig183:34626..41238- >mRNA_L-elsbetiae_contig183.5302.1 ID=mRNA_L-elsbetiae_contig183.5302.1|Name=mRNA_L-elsbetiae_contig183.5302.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=786bp|location=Sequence derived from alignment at L-elsbetiae_contig183:34626..41238- (Laminarionema elsbetiae ELsaHSoW15)back to top |