mRNA_L-elsbetiae_contig183.5300.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig183.5300.1
Unique NamemRNA_L-elsbetiae_contig183.5300.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig183.5300.1 vs. uniprot
Match: D7FPN3_ECTSI (Similar to ankyrin 2,3/unc44, partial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPN3_ECTSI)

HSP 1 Score: 152 bits (385), Expect = 6.940e-38
Identity = 73/101 (72.28%), Postives = 84/101 (83.17%), Query Frame = 1 
Query:   85 PSMPGYEDRASILLGAEDMIFKLMCERSTPEQWAEWLRAPLEHAAGTADYNLVKKLLKAGADGRAGWKGCDGKTLLHAAAEGGNAQVISTLIRAGAEADMN 387
            P    YEDRA+IL G+ED  F+L+C+R+TPEQWAEWLRAPLEHAA TAD++LVKKLL AGA+G  GW GCDGKTLLHAAAEGGNAQVI  L+RAGA  D +
Sbjct:    2 PRSSRYEDRANILRGSEDTTFRLVCDRATPEQWAEWLRAPLEHAAATADHDLVKKLLNAGANGSTGWVGCDGKTLLHAAAEGGNAQVIMALLRAGAAGDKD 102
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BLAST of mRNA_L-elsbetiae_contig183.5300.1 vs. uniprot
Match: D7G2A3_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2A3_ECTSI)

HSP 1 Score: 153 bits (386), Expect = 1.430e-37
Identity = 214/408 (52.45%), Postives = 244/408 (59.80%), Query Frame = 1 
Query:   91 MPGYEDRASILLGAEDMIFKLMCERSTPEQWAEWLRAPLEHAAGTADYNLVKKLLKAGADGRAGWKGCDGKTLLHAAAEGGNAQVISTLIRAGAEADMNAKPPNKRXXXXXXXXXXXXXXXXXXXXXXXXXXXDILDSSKDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPRTPLAVAVREDRVSTVEVLLAGGADPNYRMYYS--KTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHYIPDVTHADHEYRPRLERLTKLLMDAPQDRAWRRRGFVVMCRAHQARLRLVVEILDSGAE 1308
            MPGYE+RASIL    D IFKL+C+R+TPEQWAEWLRAPLEHAAGT + +LV KLL AGA+  AGW+GC GKTLLHAAAEGGN  VI++L RAGA  DM AK  +                             + LD++ D    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                              TPL +AVR D V+TV+VLL+ GADP++R      K                                            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       +  +  +    RP  ER++KLL  APQDRAWRRRGF+V+CRAH  R+RL V+I  + AE
Sbjct:    1 MPGYEERASILQDLGDTIFKLVCDRATPEQWAEWLRAPLEHAAGTGNRDLVDKLLGAGANVGAGWRGCHGKTLLHAAAEGGNVHVITSLRRAGAGRDMKAKSLDT-GHTPLDLAVIGGKEAAAKALIMAGADVNTLDATNDGLLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWHGLDEVVLALGEKGVDLNCLNSKG---ETPLRLAVRGDHVTTVKVLLSEGADPHFRAANRPLKLLHVAAKRNRAAAIPALFEAGVNIEGRTSSGRTPLRYAAIYDSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETVVSRVMQGMAESSEARRPFFERISKLLARAPQDRAWRRRGFLVLCRAHPDRVRLAVKIPAAAAE 404
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BLAST of mRNA_L-elsbetiae_contig183.5300.1 vs. uniprot
Match: D7FQP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP1_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 1.260e-35
Identity = 71/97 (73.20%), Postives = 82/97 (84.54%), Query Frame = 1 
Query:  103 EDRASILLGAEDMIFKLMCERSTPEQWAEWLRAPLEHAAGTADYNLVKKLLKAGADGRAGWKGCDGKTLLHAAAEGGNAQVISTLIRAGAEADMNAK 393
            EDRA  L  A  +IFKLMC+R+T EQWAEWLRAPLEHAAGTA+ +LV+KLLKAGADG AGW+GCD KTLLHAAAEGGN +V++ L+RAGA  DM AK
Sbjct:    9 EDRAKTLGDAAGIIFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTALVRAGAGEDMEAK 105
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BLAST of mRNA_L-elsbetiae_contig183.5300.1 vs. uniprot
Match: D8LHQ7_ECTSI (F-box domain and ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ7_ECTSI)

HSP 1 Score: 136 bits (343), Expect = 7.720e-33
Identity = 68/101 (67.33%), Postives = 80/101 (79.21%), Query Frame = 1 
Query:   91 MPGYEDRASILLGAEDMIFKLMCERSTPEQWAEWLRAPLEHAAGTADYNLVKKLLKAGADGRAGWKGCDGKTLLHAAAEGGNAQVISTLIRAGAEADMNAK 393
            +PGYE+R+SIL    D  FKL+ +R+TP+QWAEWLRAPLEHAA T + +LV KLL AGA+G AGW+GC GKTLLHAAAEGGN QVI+ L  AGA  DM AK
Sbjct:   43 IPGYEERSSILQDLGDTTFKLVRDRATPDQWAEWLRAPLEHAAATGNRDLVDKLLGAGANGGAGWRGCHGKTLLHAAAEGGNVQVITRLRNAGAGEDMKAK 143
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BLAST of mRNA_L-elsbetiae_contig183.5300.1 vs. uniprot
Match: D7FQP2_ECTSI (Pc16g06120 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP2_ECTSI)

HSP 1 Score: 136 bits (342), Expect = 1.020e-32
Identity = 68/99 (68.69%), Postives = 76/99 (76.77%), Query Frame = 1 
Query:  103 EDRASILLGAEDMIFKLMCERSTPEQWAEWLRAPLEHAAGTADYNLVKKLLKAGADGRAGWKGCDGKTLLHAAAEGGNAQVISTLIRAGAEADMNAKPP 399
            EDR  IL  A DMIFKLMC+R+T EQW EWLRAPLEHAAGTA+ +LV+KLLKAGADG AGW+GCD  TLLHAA       V++ LIRAGA  DM AK P
Sbjct:    9 EDRVKILGDAADMIFKLMCDRATSEQWTEWLRAPLEHAAGTANRDLVEKLLKAGADGSAGWRGCDDNTLLHAAXXXXXXXVVTALIRAGAGEDMEAKTP 107
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BLAST of mRNA_L-elsbetiae_contig183.5300.1 vs. uniprot
Match: A0A6H5JXY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY4_9PHAE)

HSP 1 Score: 137 bits (345), Expect = 4.870e-32
Identity = 70/98 (71.43%), Postives = 83/98 (84.69%), Query Frame = 1 
Query:  103 EDRASILLGAEDMIFKLMCERSTPEQWAEWLRAPLEHAAGTADYNLVKKLLKAGADGRAGWKGCDGKTLLHAAAEGGNAQ-VISTLIRAGAEADMNAK 393
            EDRA IL  A DMIF+LMC+R+T EQWAEWLRAPLEHAAGTA+ +LV+KLLKAGA+G AG +GCD  TLLHAAAEGGN + V++ LI+AGAE D+ AK
Sbjct:   11 EDRAKILGDAADMIFELMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGANGSAGRRGCDDNTLLHAAAEGGNEEEVVTALIKAGAEEDIEAK 108
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BLAST of mRNA_L-elsbetiae_contig183.5300.1 vs. uniprot
Match: D7FM65_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM65_ECTSI)

HSP 1 Score: 124 bits (311), Expect = 6.360e-28
Identity = 60/103 (58.25%), Postives = 75/103 (72.82%), Query Frame = 1 
Query:   91 MPGYEDRASILLGAEDMIFKLMCERSTPEQWAEWLRAPLEHAAGTADYNLVKKLLKAGADGRAGWKGCDGKTLLHAAAEGGNAQVISTLIRAGAEADMNAKPP 399
            M  ++DR S L G  DMI  L+C+ +TP QW +WLR PLEHAAGT +  LV+KLLK GA+  AGW+GCDG+TL+HA AEGG+ QVIS L RAGA   +N + P
Sbjct:    1 MSTHQDRKSTLHGTGDMILDLVCDLATPRQWTKWLRVPLEHAAGTGNAALVEKLLKVGANASAGWRGCDGRTLMHAGAEGGSEQVISMLTRAGAGKYINDQAP 103
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BLAST of mRNA_L-elsbetiae_contig183.5300.1 vs. uniprot
Match: D7G2A9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2A9_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 5.920e-25
Identity = 55/81 (67.90%), Postives = 65/81 (80.25%), Query Frame = 1 
Query:  109 RASILLGAEDMIFKLMCERSTPEQWAEWLRAPLEHAAGTADYNLVKKLLKAGADGRAGWKGC-DGKTLLHAAAEGGNAQVI 348
            RA I+    D IFKL+C+R T EQW+EWLRAPLEHAA TA+Y LV KLL+AGA+G A W+GC D KTLLHAAAEGG+A V+
Sbjct:    2 RARIMQDLGDTIFKLVCDRVTAEQWSEWLRAPLEHAAATANYELVSKLLRAGANGGASWRGCHDDKTLLHAAAEGGDALVV 82
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BLAST of mRNA_L-elsbetiae_contig183.5300.1 vs. uniprot
Match: D8LH19_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH19_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 1.410e-24
Identity = 52/100 (52.00%), Postives = 72/100 (72.00%), Query Frame = 1 
Query:   91 MPGYEDRASILLGAEDMIFKLMCERSTPEQWAEWLRAPLEHAAGTADYNLVKKLLKAGADGRAGWKGCDGKTLLHAAAEGGNAQVISTLIRAGAEADMNA 390
            M  +++R + L G E+ +FKL+   +TP QWAEWLRAPLEHA    + +L   LL+AGADG AGWKGCDG++LL  A +GGN++ +S L+ AG+  D+NA
Sbjct:    1 MANFDERTAALGGTEEQLFKLVSRHATPAQWAEWLRAPLEHAVAEGNQHLASTLLRAGADGGAGWKGCDGRSLLDVAVQGGNSKTVSALLEAGSLGDVNA 100
[Close]
BLAST of mRNA_L-elsbetiae_contig183.5300.1 vs. uniprot
Match: A0A6H5K513_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K513_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 3.810e-24
Identity = 57/96 (59.38%), Postives = 70/96 (72.92%), Query Frame = 1 
Query:  115 SILLGAEDMIFKLMCERSTPEQWAEWLRAPLEHAAGTADYNLVKKLLKAGADGRAGWKGCDGKTLLHAAAEGGNAQVISTLIRAGAEADMNAKPPN 402
            S+L G E  IFKL+ + +TPEQWAEWLR PLEHAA + + +LV KLLKAGADG AGW+GC  +TLL AA  GGNA V+S L++AG   D N   P+
Sbjct:    8 SLLKGQEVEIFKLVSKGATPEQWAEWLRVPLEHAAASGNLDLVNKLLKAGADGEAGWRGCGDRTLLDAALSGGNAGVMSALLQAGCGPDANVLAPS 103
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig183.5300.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPN3_ECTSI6.940e-3872.28Similar to ankyrin 2,3/unc44, partial n=2 Tax=Ecto... [more]
D7G2A3_ECTSI1.430e-3752.45Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
D7FQP1_ECTSI1.260e-3573.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LHQ7_ECTSI7.720e-3367.33F-box domain and ankyrin repeat protein n=1 Tax=Ec... [more]
D7FQP2_ECTSI1.020e-3268.69Pc16g06120 n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5JXY4_9PHAE4.870e-3271.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FM65_ECTSI6.360e-2858.25Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ecto... [more]
D7G2A9_ECTSI5.920e-2567.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LH19_ECTSI1.410e-2452.00Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
A0A6H5K513_9PHAE3.810e-2459.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig183contigL-elsbetiae_contig183:19902..21311 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score156.8
Seed ortholog evalue2.4e-35
Seed eggNOG ortholog2880.D7G2A3
KEGG koko:K21440
Hectar predicted targeting categoryother localisation
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Exons1
Model size1412
Cds size1320
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815763.1596198-UTR-L-elsbetiae_contig183:19901..199911622815763.1596198-UTR-L-elsbetiae_contig183:19901..19991Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig183 19902..19991 +
1691683086.5568895-UTR-L-elsbetiae_contig183:19901..199911691683086.5568895-UTR-L-elsbetiae_contig183:19901..19991Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig183 19902..19991 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815763.1749086-CDS-L-elsbetiae_contig183:19991..213111622815763.1749086-CDS-L-elsbetiae_contig183:19991..21311Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig183 19992..21311 +
1691683086.5724115-CDS-L-elsbetiae_contig183:19991..213111691683086.5724115-CDS-L-elsbetiae_contig183:19991..21311Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig183 19992..21311 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig183.5300.1prot_L-elsbetiae_contig183.5300.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig183 19992..21311 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig183.5300.1

>prot_L-elsbetiae_contig183.5300.1 ID=prot_L-elsbetiae_contig183.5300.1|Name=mRNA_L-elsbetiae_contig183.5300.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=440bp
MPGYEDRASILLGAEDMIFKLMCERSTPEQWAEWLRAPLEHAAGTADYNL
VKKLLKAGADGRAGWKGCDGKTLLHAAAEGGNAQVISTLIRAGAEADMNA
KPPNKRGRTPLHLAVLGGQKAASGALIMAGADVDILDSSKDAPLHLAITG
GRVGVAKDLLLSGADPSKVGSRGEHPIYLAASRGQDEVVLALVHKRVNLN
CLGTRGNTPRTPLAVAVREDRVSTVEVLLAGGADPNYRMYYSKTALHTAV
EHNKSAIIPAFIESGADMEARSDAGTTPLATAPIFGSCASMLALLQLGGS
VNTKNNKGWTPLHAACRKGNADAAGLLLRWGADETLVTDSGNTPSHYIPD
VTHADHEYRPRLERLTKLLMDAPQDRAWRRRGFVVMCRAHQARLRLVVEI
LDSGAEDIGQQPRERRSRRARRGKVKVEVEVSGAGGTGEG
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mRNA from alignment at L-elsbetiae_contig183:19902..21311+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig183.5300.1 ID=mRNA_L-elsbetiae_contig183.5300.1|Name=mRNA_L-elsbetiae_contig183.5300.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1410bp|location=Sequence derived from alignment at L-elsbetiae_contig183:19902..21311+ (Laminarionema elsbetiae ELsaHSoW15)
GGGCCCAAGTTTGTGGGGCCTTCTGTTGTCCATTCCCGACCGAGCCAGAG
AAAGAAGCAGGCCTTGCAGTGAACGGCATTTTTTCCAAGCATGCCAGGGT
ATGAAGACCGGGCGAGCATCCTGCTGGGTGCAGAAGACATGATATTCAAA
CTGATGTGCGAGCGGTCGACGCCAGAGCAGTGGGCGGAGTGGCTTAGGGC
ACCGCTCGAGCACGCTGCGGGTACCGCTGACTATAACCTGGTAAAGAAGC
TTCTTAAGGCCGGCGCTGATGGCCGTGCAGGCTGGAAAGGTTGTGACGGT
AAGACGTTGCTGCATGCGGCTGCCGAGGGCGGAAACGCTCAGGTTATATC
GACGTTGATCAGGGCCGGCGCTGAAGCAGACATGAACGCCAAACCTCCCA
ACAAACGAGGTCGAACTCCACTCCATCTTGCTGTACTCGGTGGGCAAAAG
GCTGCTTCAGGAGCGCTGATCATGGCCGGGGCGGATGTGGACATCCTCGA
CAGCAGCAAGGATGCCCCTCTGCACTTGGCCATCACAGGTGGCCGTGTTG
GAGTCGCGAAGGATCTGTTGCTCAGTGGAGCCGATCCCAGCAAGGTTGGT
TCGAGGGGTGAGCATCCAATTTATCTTGCTGCTAGCCGTGGTCAGGACGA
AGTGGTGCTAGCGTTGGTGCACAAGCGGGTGAACCTCAACTGCCTTGGAA
CCAGGGGAAATACGCCCCGGACCCCCCTCGCTGTTGCTGTGCGTGAGGAC
CGCGTTTCCACGGTGGAAGTTCTCCTGGCAGGAGGCGCCGATCCGAACTA
TCGAATGTATTATTCCAAGACGGCCCTGCACACCGCCGTGGAGCACAATA
AATCGGCGATCATCCCAGCATTCATCGAGTCCGGAGCCGATATGGAAGCC
CGGAGTGACGCTGGAACGACCCCGCTGGCTACAGCGCCCATCTTCGGCTC
ATGCGCATCCATGCTTGCTCTGCTGCAACTGGGGGGCAGCGTCAACACCA
AAAATAACAAGGGGTGGACCCCCCTCCATGCCGCGTGCCGCAAGGGAAAC
GCCGACGCCGCGGGCCTACTGCTCCGGTGGGGCGCTGATGAAACACTCGT
CACCGACTCGGGCAACACCCCCAGCCATTATATACCAGACGTCACCCACG
CCGACCACGAATACCGCCCGAGACTCGAACGTCTGACGAAGCTGCTCATG
GACGCTCCTCAAGACAGGGCATGGCGTCGCCGGGGATTCGTGGTCATGTG
CCGCGCCCACCAAGCCAGGCTTCGCCTCGTTGTGGAGATCCTTGACAGCG
GGGCGGAGGACATCGGGCAGCAGCCGCGAGAGCGCCGGAGCCGCCGTGCT
CGCAGAGGGAAGGTGAAGGTAGAAGTGGAGGTAAGTGGCGCAGGCGGAAC
AGGGGAAGGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig183:19902..21311+

>mRNA_L-elsbetiae_contig183.5300.1 ID=mRNA_L-elsbetiae_contig183.5300.1|Name=mRNA_L-elsbetiae_contig183.5300.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2640bp|location=Sequence derived from alignment at L-elsbetiae_contig183:19902..21311+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCCAGGGTATGAAGACCGGGCGAGCATCCTGCTGGGTGCAGAAGACAT
GATATTCAAACTGATGTGCGAGCGGTCGACGCCAGAGCAGTGGGCGGAGT
GGCTTAGGGCACCGCTCGAGCACGCTGCGGGTACCGCTGACTATAACCTG
GTAAAGAAGCTTCTTAAGGCCGGCGCTGATGGCCGTGCAGGCTGGAAAGG
TTGTGACGGTAAGACGTTGCTGCATGCGGCTGCCGAGGGCGGAAACGCTC
AGGTTATATCGACGTTGATCAGGGCCGGCGCTGAAGCAGACATGAACGCC
AAACCTCCCAACAAACGAGGTCGAACTCCACTCCATCTTGCTGTACTCGG
TGGGCAAAAGGCTGCTTCAGGAGCGCTGATCATGGCCGGGGCGGATGTGG
ACATCCTCGACAGCAGCAAGGATGCCCCTCTGCACTTGGCCATCACAGGT
GGCCGTGTTGGAGTCGCGAAGGATCTGTTGCTCAGTGGAGCCGATCCCAG
CAAGGTTGGTTCGAGGGGTGAGCATCCAATTTATCTTGCTGCTAGCCGTG
GTCAGGACGAAGTGGTGCTAGCGTTGGTGCACAAGCGGGTGAACCTCAAC
TGCCTTGGAACCAGGGGAAATACGCCCCGGACCCCCCTCGCTGTTGCTGT
GCGTGAGGACCGCGTTTCCACGGTGGAAGTTCTCCTGGCAGGAGGCGCCG
ATCCGAACTATCGAATGTATTATTCCAAGACGGCCCTGCACACCGCCGTG
GAGCACAATAAATCGGCGATCATCCCAGCATTCATCGAGTCCGGAGCCGA
TATGGAAGCCCGGAGTGACGCTGGAACGACCCCGCTGGCTACAGCGCCCA
TCTTCGGCTCATGCGCATCCATGCTTGCTCTGCTGCAACTGGGGGGCAGC
GTCAACACCAAAAATAACAAGGGGTGGACCCCCCTCCATGCCGCGTGCCG
CAAGGGAAACGCCGACGCCGCGGGCCTACTGCTCCGGTGGGGCGCTGATG
AAACACTCGTCACCGACTCGGGCAACACCCCCAGCCATTATATACCAGAC
GTCACCCACGCCGACCACGAATACCGCCCGAGACTCGAACGTCTGACGAA
GCTGCTCATGGACGCTCCTCAAGACAGGGCATGGCGTCGCCGGGGATTCG
TGGTCATGTGCCGCGCCCACCAAGCCAGGCTTCGCCTCGTTGTGGAGATC
CTTGACAGCGGGGCGGAGGACATCGGGCAGCAGCCGCGAGAGCGCCGGAG
CCGCCGTGCTCGCAGAGGGAAGGTGAAGGTAGAAGTGGAGGTAAGTGGCG
CAGGCGGAACAGGGGAAGGGATGCCAGGGTATGAAGACCGGGCGAGCATC
CTGCTGGGTGCAGAAGACATGATATTCAAACTGATGTGCGAGCGGTCGAC
GCCAGAGCAGTGGGCGGAGTGGCTTAGGGCACCGCTCGAGCACGCTGCGG
GTACCGCTGACTATAACCTGGTAAAGAAGCTTCTTAAGGCCGGCGCTGAT
GGCCGTGCAGGCTGGAAAGGTTGTGACGGTAAGACGTTGCTGCATGCGGC
TGCCGAGGGCGGAAACGCTCAGGTTATATCGACGTTGATCAGGGCCGGCG
CTGAAGCAGACATGAACGCCAAACCTCCCAACAAACGAGGTCGAACTCCA
CTCCATCTTGCTGTACTCGGTGGGCAAAAGGCTGCTTCAGGAGCGCTGAT
CATGGCCGGGGCGGATGTGGACATCCTCGACAGCAGCAAGGATGCCCCTC
TGCACTTGGCCATCACAGGTGGCCGTGTTGGAGTCGCGAAGGATCTGTTG
CTCAGTGGAGCCGATCCCAGCAAGGTTGGTTCGAGGGGTGAGCATCCAAT
TTATCTTGCTGCTAGCCGTGGTCAGGACGAAGTGGTGCTAGCGTTGGTGC
ACAAGCGGGTGAACCTCAACTGCCTTGGAACCAGGGGAAATACGCCCCGG
ACCCCCCTCGCTGTTGCTGTGCGTGAGGACCGCGTTTCCACGGTGGAAGT
TCTCCTGGCAGGAGGCGCCGATCCGAACTATCGAATGTATTATTCCAAGA
CGGCCCTGCACACCGCCGTGGAGCACAATAAATCGGCGATCATCCCAGCA
TTCATCGAGTCCGGAGCCGATATGGAAGCCCGGAGTGACGCTGGAACGAC
CCCGCTGGCTACAGCGCCCATCTTCGGCTCATGCGCATCCATGCTTGCTC
TGCTGCAACTGGGGGGCAGCGTCAACACCAAAAATAACAAGGGGTGGACC
CCCCTCCATGCCGCGTGCCGCAAGGGAAACGCCGACGCCGCGGGCCTACT
GCTCCGGTGGGGCGCTGATGAAACACTCGTCACCGACTCGGGCAACACCC
CCAGCCATTATATACCAGACGTCACCCACGCCGACCACGAATACCGCCCG
AGACTCGAACGTCTGACGAAGCTGCTCATGGACGCTCCTCAAGACAGGGC
ATGGCGTCGCCGGGGATTCGTGGTCATGTGCCGCGCCCACCAAGCCAGGC
TTCGCCTCGTTGTGGAGATCCTTGACAGCGGGGCGGAGGACATCGGGCAG
CAGCCGCGAGAGCGCCGGAGCCGCCGTGCTCGCAGAGGGAAGGTGAAGGT
AGAAGTGGAGGTAAGTGGCGCAGGCGGAACAGGGGAAGGG
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