mRNA_L-elsbetiae_contig1828.5290.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1828.5290.1 vs. uniprot
Match: D8LSZ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSZ3_ECTSI) HSP 1 Score: 570 bits (1468), Expect = 2.270e-200 Identity = 313/459 (68.19%), Postives = 327/459 (71.24%), Query Frame = 1 Query: 55 MIVQDYISKRFRGEKPISRRHKPKGVDSCFGNFPAQYKKRDGWDGNPTLRRDSRTSYTSPQKSPVKAFRQGGRDTKEVSGVIPGIGARPSTAGARRRSTDYSKNGTTSGISCSGTGIDTMAAKRGGHGARPKSASVSRSRSLLEVQGTSTSAASKARHETKGQGDGEMGEGLASTYPEKPRKA-RARPQTAGATPTSRGPPG--TVPEDLPDLQELEATRTYLLTQGKFRITPSKLMASLEVARATNSRPLSAPPGARXXXXXXXXXAGAWRRRVIAATLFRKYYVRGDLPISVDHTGHRNAIRWKIRPAELDFHVYLPIFFDGLREVEDPYRFLAVQGTLDMIESAPDKVLPVIPQLILPTKTALNTREPRIICPTLKILQQMVLLSPMVGQALVPYYRQLLPVFNLFRGKNSNMGDAIDYNQRSRTNIGELIIETLEVMEHFGGPDAFINIKYMVPT 1422 MIVQDYISKRFRGEKPISRRH PKGVDSCFGNFP QYK +D WDGNPTLRRDSRTSYTSPQ+SP K R G G +T A+R G G P LAST EK RKA R RP+TAGA PTSRG G V EDLPD QELEATRTYLLTQGKFRITPSKLMASLE ARATNSRPLSAP R AGAWRRR IAATLFRKYYVRGDLPISVDH GHRNAIRWKIRPA+LDFHVYLPIFFDGLREVEDPYRFLAVQGT+DMIE APDKVLPVIPQLILP KTALNTREPRIICPTLKILQQM+LLSPM+GQALVPYYRQLLP+FNLFRG NSNMGDAIDYNQRSR N+G+LI+ETLEVME FGGPDAFINIKYM+PT Sbjct: 1 MIVQDYISKRFRGEKPISRRHMPKGVDSCFGNFPMQYKTKDAWDGNPTLRRDSRTSYTSPQRSPTKTRRPKGSRQXXXXXXXRDPGG------------------------------ETRTAERRGEGGVPS---------------------------------------LAST--EKGRKATRVRPKTAGARPTSRGRKGGGVVLEDLPDRQELEATRTYLLTQGKFRITPSKLMASLEAARATNSRPLSAPASVRRRRAPAPPKAGAWRRRAIAATLFRKYYVRGDLPISVDHCGHRNAIRWKIRPADLDFHVYLPIFFDGLREVEDPYRFLAVQGTVDMIEGAPDKVLPVIPQLILPMKTALNTREPRIICPTLKILQQMILLSPMIGQALVPYYRQLLPMFNLFRGMNSNMGDAIDYNQRSRINVGKLIMETLEVMEQFGGPDAFINIKYMIPT 388
BLAST of mRNA_L-elsbetiae_contig1828.5290.1 vs. uniprot
Match: A0A836C8N9_9STRA (Parkin co-regulated protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8N9_9STRA) HSP 1 Score: 400 bits (1028), Expect = 2.280e-134 Identity = 229/461 (49.67%), Postives = 271/461 (58.79%), Query Frame = 1 Query: 55 MIVQDYISK---RFRGEKPISRRHKPKGVDSCFGNFPAQYKKRDGWDGNPTLRRDSRTSYTSPQKSPVKAFRQGGRDTKEVSGVIPGIGARPSTAGARRRSTDYSKNGTTSGISCSGTGIDTMAAKRGGHGARPKSASVSRSRSLLEVQGTSTSAASKARHETKGQGDGEMGEGLASTYPEKPRKARARPQTAGATPTSRGPPGTVPEDLPDLQELEATRTYLLTQGKFRITPSKLMASLEVARATNSRPLSAPPGA--RXXXXXXXXXAGAWRRRVIAATLFRKYYVRGDLPISVDHTGHRNAIRWKIRPAELDFHVYLPIFFDGLREVEDPYRFLAVQGTLDMIESAPDKVLPVIPQLILPTKTALNTREPRIICPTLKILQQMVLLSPMVGQALVPYYRQLLPVFNLFRGKNSNMGDAIDYNQRSRTNIGELIIETLEVMEHFGGPDAFINIKYMVPT 1422 M +Y+++ R R E+ + + KPKGVDSCFGNFP YK D WDGNPTLRR R Y+S S +SA K+R T L++T P +PE+ DL EL+ATR YL+T GKF+ +P+KLMA+LEVARAT++RPL+AP R AGAWRRR IA TLFR+YY RGDLPI VDH + NAIRWK+R AELDFHVYLPIFFDGLREVEDP+RFLAVQGTLDM+E+APDKVLPVIPQLILP K+ALNTR P IICP LKILQQM+LL+ VGQALVPYYRQ+LP+FNLF+ KN+N+GD IDY QRSR N+GELI+ETLE+ME FGGPDAFINIKY++PT Sbjct: 1 MPTTEYVNRHIRRDRREEALLKGIKPKGVDSCFGNFPITYKHGDHWDGNPTLRRGMRKRYSSSSSS--------------------------------------------------------------------------------------SSALVKSRLPT-----------LSATAP-------------------------IPEEKADLAELQATRQYLMTSGKFKTSPAKLMAALEVARATHTRPLTAPGYVLRRRQADVTAPKAGAWRRRAIAPTLFRRYYERGDLPICVDHRSNGNAIRWKMRAAELDFHVYLPIFFDGLREVEDPFRFLAVQGTLDMVEAAPDKVLPVIPQLILPLKSALNTRAPTIICPVLKILQQMILLNAAVGQALVPYYRQILPIFNLFKAKNANLGDGIDYGQRSRVNVGELILETLELMEQFGGPDAFINIKYLIPT 339
BLAST of mRNA_L-elsbetiae_contig1828.5290.1 vs. uniprot
Match: A0A7S3Y211_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y211_HETAK) HSP 1 Score: 282 bits (721), Expect = 3.850e-90 Identity = 136/192 (70.83%), Postives = 158/192 (82.29%), Query Frame = 1 Query: 847 AGAWRRRVIAATLFRKYYVRGDLPISVDHTGHRNAIRWKIRPAELDFHVYLPIFFDGLREVEDPYRFLAVQGTLDMIESAPDKVLPVIPQLILPTKTALNTREPRIICPTLKILQQMVLLSPMVGQALVPYYRQLLPVFNLFRGKNSNMGDAIDYNQRSRTNIGELIIETLEVMEHFGGPDAFINIKYMVPT 1422 AGA+R R I ATLFR+YY RGDLP+ V+H N+ RW ELD+H+YLPIF DGLRE +DPYRFLAVQGTLDM+ AP+KVLPVIPQ+ILP K ALNTR P IICP LK+LQQMVL +P+VGQALVPYYRQLLPVFNL+R ++ N+GD I YNQR RTN+ ELI ETLE++E GGPDAFINIKYM+PT Sbjct: 5 AGAYRYRPIEATLFRRYYDRGDLPVVVEHRAAGNSTRWTRDLYELDYHIYLPIFVDGLRERDDPYRFLAVQGTLDMVLVAPEKVLPVIPQIILPLKAALNTRHPVIICPALKVLQQMVLQNPLVGQALVPYYRQLLPVFNLYRARDENLGDGIAYNQRQRTNVAELIRETLEILEVHGGPDAFINIKYMIPT 196
BLAST of mRNA_L-elsbetiae_contig1828.5290.1 vs. uniprot
Match: A0A6T7Z7R8_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A6T7Z7R8_9EUKA) HSP 1 Score: 259 bits (663), Expect = 7.210e-80 Identity = 123/192 (64.06%), Postives = 152/192 (79.17%), Query Frame = 1 Query: 850 GAWRRRVIAA-TLFRKYYVRGDLPISVDHTGHRNAIRWKIRPAELDFHVYLPIFFDGLREVEDPYRFLAVQGTLDMIESAPDKVLPVIPQLILPTKTALNTREPRIICPTLKILQQMVLLSPMVGQALVPYYRQLLPVFNLFRGKNSNMGDAIDYNQRSRTNIGELIIETLEVMEHFGGPDAFINIKYMVPT 1422 GA+R R T FR++Y RGDLPI V+H G N I WK+ +LD+H YLPIFFDGLRE E+PYRFLAVQG DM+E+ K+LPVIPQLI+P KTALNTR+P IIC LK+LQQMV+ M+G+ALVPYYRQ+LP+FNLF+ KN+N+GD IDY+Q+ R +G+LI+ETLE+ E GG DAFINIKYM+PT Sbjct: 113 GAFRERANPPNTEFRRFYERGDLPIQVEHRGVHNRIGWKVDIEKLDYHHYLPIFFDGLREKEEPYRFLAVQGVFDMLENGGSKILPVIPQLIIPIKTALNTRDPPIICTVLKVLQQMVVSGEMIGEALVPYYRQILPIFNLFKSKNNNLGDGIDYSQQKRKTLGDLIVETLEMFEIHGGEDAFINIKYMIPT 304
BLAST of mRNA_L-elsbetiae_contig1828.5290.1 vs. uniprot
Match: D2UXD6_NAEGR (Uncharacterized protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2UXD6_NAEGR) HSP 1 Score: 259 bits (662), Expect = 1.730e-79 Identity = 137/277 (49.46%), Postives = 180/277 (64.98%), Query Frame = 1 Query: 604 RARPQTAGATPTSRGPPGTVPEDLPD----LQELEATRTYLLTQGKFRITPSKLMASLEVARATNSRPLSAPPGARXXXXXXXXXAGAWRRRVIAATLFRKYYVRGDLPISVDHTGHRNAIRWKIRPAELDFHVYLPIFFDGLREVEDPYRFLAVQGTLDMIESAPDKVLPVIPQLILPTKTALNTREPRIICPTLKILQQMVLLSPMVGQALVPYYRQLLPVFNLFRGKNSNMGDAIDYNQRSRTNIGELIIETLEVMEHFGGPDAFINIKYMVPT 1422 ++RP +S P G+ P ++ Q ++++ L G SK + S + + PP AGA RR I T FRK+Y RGDLPIS+ H G N I WK++ +LD+H YLPIFFDGLRE E+PYRFLAVQGT D+++ DK++ IPQLI+P KTALNTR+P IIC LK++QQ+VL + VG+ALVPYYRQ+LP+FNLF+ N N+GDAI+Y+QR R NIG+LI ETL+++E GG DAFINIKYM+PT Sbjct: 54 QSRPDATFLPKSSESPFGSFPNEMKPRTMKTQRIQSSTESSLDSGLVGSKISKKIGSGGASSSLREGKKPTPP--------PKPVAGAMERRSIPETQFRKFYERGDLPISIKHEG-TNEIHWKVKAEKLDYHHYLPIFFDGLREKEEPYRFLAVQGTFDLLKYGKDKIVNCIPQLIIPIKTALNTRDPEIICTVLKVIQQLVLSNEKVGEALVPYYRQILPIFNLFKTNNINLGDAIEYSQRKRLNIGDLIEETLQLLEQEGGEDAFINIKYMIPT 321
BLAST of mRNA_L-elsbetiae_contig1828.5290.1 vs. uniprot
Match: A0A1R2C2S2_9CILI (Uncharacterized protein n=3 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2C2S2_9CILI) HSP 1 Score: 258 bits (658), Expect = 3.340e-79 Identity = 126/192 (65.62%), Postives = 153/192 (79.69%), Query Frame = 1 Query: 847 AGAWRRRVIAATLFRKYYVRGDLPISVDHTGHRNAIRWKIRPAELDFHVYLPIFFDGLREVEDPYRFLAVQGTLDMIESAPDKVLPVIPQLILPTKTALNTREPRIICPTLKILQQMVLLSPMVGQALVPYYRQLLPVFNLFRGKNSNMGDAIDYNQRSRTNIGELIIETLEVMEHFGGPDAFINIKYMVPT 1422 AGA+ RR I ++ FR++Y RGD+PI+V H G N I WK+ +LD+H YLPIFFDGLRE DPYRFLA+QG DM+E +KVLPVIPQLI+P KTALNTR+P IIC LKILQ++V + M+G+ALVPYYRQ+LPVFN+F+ KN+N GD IDY QR R NIGELI ETLE++E GG DAFINIKYM+PT Sbjct: 108 AGAFNRRSIPSSEFRRFYDRGDMPIAVSHGG-TNKIVWKVAVDQLDYHHYLPIFFDGLREKSDPYRFLAIQGVFDMLEHGGNKVLPVIPQLIIPIKTALNTRDPDIICVILKILQKLVTSADMIGEALVPYYRQILPVFNIFKQKNANYGDKIDYAQRKRQNIGELIQETLELLETTGGEDAFINIKYMIPT 298
BLAST of mRNA_L-elsbetiae_contig1828.5290.1 vs. uniprot
Match: A0A1R2BM68_9CILI (Uncharacterized protein n=2 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BM68_9CILI) HSP 1 Score: 257 bits (656), Expect = 6.650e-79 Identity = 130/213 (61.03%), Postives = 158/213 (74.18%), Query Frame = 1 Query: 784 NSRPLSAPPGARXXXXXXXXXAGAWRRRVIAATLFRKYYVRGDLPISVDHTGHRNAIRWKIRPAELDFHVYLPIFFDGLREVEDPYRFLAVQGTLDMIESAPDKVLPVIPQLILPTKTALNTREPRIICPTLKILQQMVLLSPMVGQALVPYYRQLLPVFNLFRGKNSNMGDAIDYNQRSRTNIGELIIETLEVMEHFGGPDAFINIKYMVPT 1422 N PL APP AGA+ +R I + FR++Y RGD+PI+V H G N I WK+ +LD+H YLPIFFDGLRE DPYRFLA+QG DM+E +KVLPVIPQLI+P KTALNTR+P IIC LKILQ++V + M+G+ALVPYYRQ+LPVFN+F+ KN+N GD IDY+QR NIGELI ETLE++E GG DAFINIKYM+PT Sbjct: 98 NDIPLVAPP-----------RAGAYNKRNIPPSEFRRFYDRGDMPIAVSHGG-TNKIVWKVAVDQLDYHHYLPIFFDGLREKTDPYRFLAIQGVFDMLEHGGNKVLPVIPQLIIPVKTALNTRDPDIICVILKILQKLVTSADMIGEALVPYYRQILPVFNIFKHKNANYGDKIDYSQRKHQNIGELIQETLELLETTGGEDAFINIKYMIPT 298
BLAST of mRNA_L-elsbetiae_contig1828.5290.1 vs. uniprot
Match: A0A6A5BPF7_NAEFO (Uncharacterized protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5BPF7_NAEFO) HSP 1 Score: 258 bits (660), Expect = 7.220e-79 Identity = 123/192 (64.06%), Postives = 154/192 (80.21%), Query Frame = 1 Query: 847 AGAWRRRVIAATLFRKYYVRGDLPISVDHTGHRNAIRWKIRPAELDFHVYLPIFFDGLREVEDPYRFLAVQGTLDMIESAPDKVLPVIPQLILPTKTALNTREPRIICPTLKILQQMVLLSPMVGQALVPYYRQLLPVFNLFRGKNSNMGDAIDYNQRSRTNIGELIIETLEVMEHFGGPDAFINIKYMVPT 1422 AGA RR I T FRK+Y RGDLPIS+ H G N I WK++ +LD+H YLPIFFDGLRE E+PYRFLAVQGT D+++ DK++ IPQLI+P KTALNTR+P IIC LK++QQ+VL + VG+ALVPYYRQ+LP+FNLF+ +N N+GDAI+Y+QR R NIG+LI ETL+++E GG DAFINIKYM+PT Sbjct: 155 AGAMERRPIPDTQFRKFYERGDLPISIKHEG-TNEIHWKVKAEKLDYHHYLPIFFDGLREKEEPYRFLAVQGTFDLLKYGKDKIVNCIPQLIIPIKTALNTRDPEIICTVLKVIQQLVLSNNKVGEALVPYYRQILPIFNLFKTQNINLGDAIEYSQRKRLNIGDLIEETLQLLEQEGGEDAFINIKYMIPT 345
BLAST of mRNA_L-elsbetiae_contig1828.5290.1 vs. uniprot
Match: A0A7S0J9A5_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J9A5_9EUKA) HSP 1 Score: 257 bits (657), Expect = 1.490e-78 Identity = 130/254 (51.18%), Postives = 168/254 (66.14%), Query Frame = 1 Query: 664 PEDLPDLQELEATRTYLLTQGKFRITPSKLMASLEVARATNSRPLSAPPGARXXXXXXXXXAGAWRRRVIAA-TLFRKYYVRGDLPISVDHTGHRNAIRWKIRPAELDFHVYLPIFFDGLREVEDPYRFLAVQGTLDMIESAPDKVLPVIPQLILPTKTALNTREPRIICPTLKILQQMVLLSPMVGQALVPYYRQLLPVFNLFRGKNSNMGDAIDYNQRSRTNIGELIIETLEVMEHFGGPDAFINIKYMVPT 1422 P D+P +T TY Q + +P++L T+S + P GA+++R T FR++Y RGDLPI ++H G N I WK+ +LD+H YLPIFFDGLRE E+PYRFLAVQG DM+E K+LPVIPQLI+P KTALNTR+ +IC LK+LQQMV+ M+G+ALVPYYRQ+LP+FN+F+ N N+GD IDY Q+ R +G+LIIETLE+ E GG DAFINIKYM+PT Sbjct: 85 PADMPLPDYNASTMTYCFKQSTAKASPTQLKGHTGNGGMTSSLAIGNTP---ECIKPSPPVCGAFKQRANPPNTEFRRFYERGDLPIQIEHRGVHNRIGWKVDIEKLDYHHYLPIFFDGLREKEEPYRFLAVQGVFDMLEHGGSKILPVIPQLIIPVKTALNTRDSDVICTVLKVLQQMVVSGEMIGEALVPYYRQILPIFNIFKNNNKNIGDKIDYAQQKRMTLGDLIIETLEMFETHGGEDAFINIKYMIPT 335
BLAST of mRNA_L-elsbetiae_contig1828.5290.1 vs. uniprot
Match: A0A7S4B761_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B761_CHRCT) HSP 1 Score: 256 bits (653), Expect = 2.640e-78 Identity = 124/225 (55.11%), Postives = 159/225 (70.67%), Query Frame = 1 Query: 751 LMASLEVARATNSRPLSAPPGARXXXXXXXXXAGAWRRRVIAA-TLFRKYYVRGDLPISVDHTGHRNAIRWKIRPAELDFHVYLPIFFDGLREVEDPYRFLAVQGTLDMIESAPDKVLPVIPQLILPTKTALNTREPRIICPTLKILQQMVLLSPMVGQALVPYYRQLLPVFNLFRGKNSNMGDAIDYNQRSRTNIGELIIETLEVMEHFGGPDAFINIKYMVPT 1422 + +SL V + T APP GA+++R T FR++Y RGDLPI ++H G N I WK+ +LD+H YLPIFFDGLRE E+PYRFL+VQG DM+E K+LPVIPQLI+P KTALNTR+P +IC LK+LQQMV+ M+G+ALVPYYRQ+LP+FN+F+ N N+GD IDY Q+ R +G+LI+ETLE+ E GG DAFINIKYM+PT Sbjct: 96 MTSSLAVGKTTTEAVKPAPP-----------ICGAYKQRANPPNTEFRRFYERGDLPIQIEHRGVHNRIGWKVDIEKLDYHHYLPIFFDGLREKEEPYRFLSVQGVFDMLEHGGSKILPVIPQLIIPIKTALNTRDPDVICTVLKVLQQMVVSGEMIGEALVPYYRQILPIFNIFKNSNKNLGDKIDYGQQKRKTLGDLIVETLEMFETHGGEDAFINIKYMIPT 309 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1828.5290.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1828.5290.1 >prot_L-elsbetiae_contig1828.5290.1 ID=prot_L-elsbetiae_contig1828.5290.1|Name=mRNA_L-elsbetiae_contig1828.5290.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=475bp MSYVGVPAVPRDSTIASSMIVQDYISKRFRGEKPISRRHKPKGVDSCFGNback to top mRNA from alignment at L-elsbetiae_contig1828:2857..10769- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1828.5290.1 ID=mRNA_L-elsbetiae_contig1828.5290.1|Name=mRNA_L-elsbetiae_contig1828.5290.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7913bp|location=Sequence derived from alignment at L-elsbetiae_contig1828:2857..10769- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1828:2857..10769- >mRNA_L-elsbetiae_contig1828.5290.1 ID=mRNA_L-elsbetiae_contig1828.5290.1|Name=mRNA_L-elsbetiae_contig1828.5290.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2850bp|location=Sequence derived from alignment at L-elsbetiae_contig1828:2857..10769- (Laminarionema elsbetiae ELsaHSoW15)back to top |