mRNA_L-elsbetiae_contig18260.5284.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig18260.5284.1 vs. uniprot
Match: D8LNX3_ECTSI (Tubulin folding cofactor D n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNX3_ECTSI) HSP 1 Score: 180 bits (456), Expect = 9.750e-51 Identity = 81/86 (94.19%), Postives = 86/86 (100.00%), Query Frame = 2 Query: 2 GRPGEAFPFQVFICPQLHAVFCVIYQLCRVRGAKAVVRLMPHEASELEPVLHALQAQDTDDYSTWETRYGLLLWLSMLSLVPFDID 259 GRPGEAFPFQVFICPQLH++FCVIYQLCRVRGAKAVVRLMPHEA++LEPV+HALQAQDTDDYSTWETRYGLLLWLSMLSLVPFDID Sbjct: 74 GRPGEAFPFQVFICPQLHSMFCVIYQLCRVRGAKAVVRLMPHEAADLEPVIHALQAQDTDDYSTWETRYGLLLWLSMLSLVPFDID 159
BLAST of mRNA_L-elsbetiae_contig18260.5284.1 vs. uniprot
Match: A0A6H5KH41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH41_9PHAE) HSP 1 Score: 134 bits (338), Expect = 7.910e-35 Identity = 60/67 (89.55%), Postives = 66/67 (98.51%), Query Frame = 2 Query: 59 VFCVIYQLCRVRGAKAVVRLMPHEASELEPVLHALQAQDTDDYSTWETRYGLLLWLSMLSLVPFDID 259 +FC+IYQLCR+RGAKAV RLMPHEA++LEPV+HALQAQDTDDYSTWETRYGLLLWLSMLSLVPFDID Sbjct: 1 MFCMIYQLCRLRGAKAVARLMPHEAADLEPVIHALQAQDTDDYSTWETRYGLLLWLSMLSLVPFDID 67
BLAST of mRNA_L-elsbetiae_contig18260.5284.1 vs. uniprot
Match: A0A7S2WVP9_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVP9_9STRA) HSP 1 Score: 117 bits (292), Expect = 5.140e-30 Identity = 52/82 (63.41%), Postives = 61/82 (74.39%), Query Frame = 2 Query: 11 GEAFPFQVFICPQLHAVFCVIYQLCRVRGAKAVVRLMPHEASELEPVLHALQAQDTDDYSTWETRYGLLLWLSMLSLVPFDI 256 GEAFPFQ PQLH +F ++YQLCR RG K V + HE S+LEP L LQ+QD D+ +WETRYGLLLWLSML +VPFDI Sbjct: 115 GEAFPFQCAREPQLHCIFQIVYQLCRCRGQKCVAKFFSHEVSDLEPTLFMLQSQDRHDHGSWETRYGLLLWLSMLVMVPFDI 196
BLAST of mRNA_L-elsbetiae_contig18260.5284.1 vs. uniprot
Match: D0NUW3_PHYIT (Tubulin-specific chaperone D, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NUW3_PHYIT) HSP 1 Score: 119 bits (297), Expect = 2.730e-29 Identity = 53/81 (65.43%), Postives = 65/81 (80.25%), Query Frame = 2 Query: 17 AFPFQVFICPQLHAVFCVIYQLCRVRGAKAVVRLMPHEASELEPVLHALQAQDTDDYSTWETRYGLLLWLSMLSLVPFDID 259 AFP QV+ P+LH +F +IYQLC+VRG K VV+L+PHE S+ EP LH LQ+QD D+S WETRY LLLWLSML LVPFD++ Sbjct: 98 AFPCQVYRNPRLHKLFQIIYQLCKVRGYKTVVKLLPHEVSDFEPTLHLLQSQDRTDHSAWETRYVLLLWLSMLCLVPFDLN 178
BLAST of mRNA_L-elsbetiae_contig18260.5284.1 vs. uniprot
Match: A0A5D6XM80_9STRA (TFCD_C domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XM80_9STRA) HSP 1 Score: 117 bits (293), Expect = 9.480e-29 Identity = 52/81 (64.20%), Postives = 65/81 (80.25%), Query Frame = 2 Query: 17 AFPFQVFICPQLHAVFCVIYQLCRVRGAKAVVRLMPHEASELEPVLHALQAQDTDDYSTWETRYGLLLWLSMLSLVPFDID 259 AFPFQV+ P+LH + ++Y LC+VRG K VV+L+PHEAS+ EP L LQ+QD D+STWETRY LLLWLSML LVPFD++ Sbjct: 113 AFPFQVYRNPRLHKLLQLVYHLCKVRGYKTVVKLLPHEASDFEPTLRLLQSQDRSDHSTWETRYVLLLWLSMLCLVPFDLN 193
BLAST of mRNA_L-elsbetiae_contig18260.5284.1 vs. uniprot
Match: K3WX30_GLOUD (TFCD_C domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WX30_GLOUD) HSP 1 Score: 117 bits (292), Expect = 1.290e-28 Identity = 52/81 (64.20%), Postives = 65/81 (80.25%), Query Frame = 2 Query: 17 AFPFQVFICPQLHAVFCVIYQLCRVRGAKAVVRLMPHEASELEPVLHALQAQDTDDYSTWETRYGLLLWLSMLSLVPFDID 259 AFPFQV+ P+LH +F +IY LC+VRG K +V+L+PHE S+ EP L LQ+QD D+STWETRY LLLWLSML LVPFD++ Sbjct: 144 AFPFQVYKNPKLHKLFQLIYHLCKVRGFKTIVKLLPHEVSDFEPTLMLLQSQDRTDHSTWETRYVLLLWLSMLCLVPFDLN 224
BLAST of mRNA_L-elsbetiae_contig18260.5284.1 vs. uniprot
Match: A0A662Y9P7_9STRA (TFCD_C domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y9P7_9STRA) HSP 1 Score: 117 bits (292), Expect = 1.300e-28 Identity = 52/83 (62.65%), Postives = 65/83 (78.31%), Query Frame = 2 Query: 11 GEAFPFQVFICPQLHAVFCVIYQLCRVRGAKAVVRLMPHEASELEPVLHALQAQDTDDYSTWETRYGLLLWLSMLSLVPFDID 259 G AFP QV+ P+LH +F +IY LC+VRG K VV+L+PHE S+ EP L LQ+QD DD++ WETRY LLLWLSML LVPFD++ Sbjct: 259 GVAFPCQVYRDPKLHKLFQLIYHLCKVRGYKTVVKLLPHEVSDFEPTLQLLQSQDRDDHAAWETRYVLLLWLSMLCLVPFDLN 341
BLAST of mRNA_L-elsbetiae_contig18260.5284.1 vs. uniprot
Match: M4BSB0_HYAAE (TFCD_C domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BSB0_HYAAE) HSP 1 Score: 116 bits (291), Expect = 1.760e-28 Identity = 51/83 (61.45%), Postives = 65/83 (78.31%), Query Frame = 2 Query: 11 GEAFPFQVFICPQLHAVFCVIYQLCRVRGAKAVVRLMPHEASELEPVLHALQAQDTDDYSTWETRYGLLLWLSMLSLVPFDID 259 G AFP QV+ P+LH +F ++Y LC+VRG K VV+L+PHE S+ EP L LQ+QD D+STWETRY LLLWLS+L LVPFD++ Sbjct: 26 GVAFPCQVYHNPRLHKLFQIVYHLCKVRGYKTVVKLLPHEVSDFEPTLELLQSQDRSDHSTWETRYVLLLWLSILCLVPFDLN 108
BLAST of mRNA_L-elsbetiae_contig18260.5284.1 vs. uniprot
Match: G4Z932_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z932_PHYSP) HSP 1 Score: 114 bits (286), Expect = 3.750e-28 Identity = 51/83 (61.45%), Postives = 64/83 (77.11%), Query Frame = 2 Query: 11 GEAFPFQVFICPQLHAVFCVIYQLCRVRGAKAVVRLMPHEASELEPVLHALQAQDTDDYSTWETRYGLLLWLSMLSLVPFDID 259 G AFP QV+ P+LH +F ++Y LC+VRG K VV+L+PHE S+ EP L LQ+QD D+S WETRY LLLWLSML LVPFD++ Sbjct: 101 GVAFPCQVYRNPRLHKLFQLVYHLCKVRGYKTVVKLLPHEVSDFEPTLQLLQSQDRADHSAWETRYVLLLWLSMLCLVPFDLN 183
BLAST of mRNA_L-elsbetiae_contig18260.5284.1 vs. uniprot
Match: A0A7S1CET7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CET7_9STRA) HSP 1 Score: 113 bits (283), Expect = 4.100e-28 Identity = 51/86 (59.30%), Postives = 64/86 (74.42%), Query Frame = 2 Query: 2 GRPGEAFPFQVFICPQLHAVFCVIYQLCRVRGAKAVVRLMPHEASELEPVLHALQAQDTDDYSTWETRYGLLLWLSMLSLVPFDID 259 G AFPFQ+F P+LH VF ++Y LC+ RG K VVRL+PHE ++LEPV+ L +QD + TWETRYGLLLWLSML VPFD++ Sbjct: 104 GAAAGAFPFQMFRSPRLHRVFQLLYLLCKTRGYKHVVRLLPHEVADLEPVVGLLLSQDQTQHGTWETRYGLLLWLSMLVRVPFDLN 189 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18260.5284.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig18260.5284.1 >prot_L-elsbetiae_contig18260.5284.1 ID=prot_L-elsbetiae_contig18260.5284.1|Name=mRNA_L-elsbetiae_contig18260.5284.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=87bp GAAWRSLSFPGLYLPAAPRGVLRDLPAVPRERGKGGGAPHASRSIRAGAGback to top mRNA from alignment at L-elsbetiae_contig18260:1872..2879- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig18260.5284.1 ID=mRNA_L-elsbetiae_contig18260.5284.1|Name=mRNA_L-elsbetiae_contig18260.5284.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1008bp|location=Sequence derived from alignment at L-elsbetiae_contig18260:1872..2879- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig18260:1872..2879- >mRNA_L-elsbetiae_contig18260.5284.1 ID=mRNA_L-elsbetiae_contig18260.5284.1|Name=mRNA_L-elsbetiae_contig18260.5284.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=522bp|location=Sequence derived from alignment at L-elsbetiae_contig18260:1872..2879- (Laminarionema elsbetiae ELsaHSoW15)back to top |