mRNA_L-elsbetiae_contig18231.5273.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig18231.5273.1 vs. uniprot
Match: D8LHW4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHW4_ECTSI) HSP 1 Score: 314 bits (804), Expect = 1.210e-94 Identity = 154/161 (95.65%), Postives = 159/161 (98.76%), Query Frame = 3 Query: 3 GLEDDERDRLLDMPQSKMADVANFCNAFPNVEMGFEVQESDDITAGDPVSLVVTLERDGEEDEDEPEGGWGKVCAPLYPKSKTEAWWVVVGDKKKNTLLAIKRVTLQRKTRAKLEFAAPDEVGEHTLELFLMCDSYVGCDQEYAVDLMVGAAGSDDESDED 485 GLEDDERDRLLDMPQSKM DVANFCNAFPNVEM FEVQESDDITAGDPV+LVV+LER+GEEDEDEPEGGWGKVCAPLYPKSKTEAWWVVVGDKKKNTLLAIKRVTLQRKTRAKLEFAAPDEVGEHTLELFLMCDSYVGCDQEYAV+LMVGAAGSDDES+ED Sbjct: 2035 GLEDDERDRLLDMPQSKMGDVANFCNAFPNVEMDFEVQESDDITAGDPVTLVVSLEREGEEDEDEPEGGWGKVCAPLYPKSKTEAWWVVVGDKKKNTLLAIKRVTLQRKTRAKLEFAAPDEVGEHTLELFLMCDSYVGCDQEYAVELMVGAAGSDDESEED 2195
BLAST of mRNA_L-elsbetiae_contig18231.5273.1 vs. uniprot
Match: A0A7S2JTU2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JTU2_9STRA) HSP 1 Score: 181 bits (460), Expect = 7.930e-54 Identity = 85/154 (55.19%), Postives = 114/154 (74.03%), Query Frame = 3 Query: 6 LEDDERDRLLDMPQSKMADVANFCNAFPNVEMGFEVQESDDITAGDPVSLVVTLERDGEEDEDEPEGGWGKVCAPLYPKSKTEAWWVVVGDKKKNTLLAIKRVTLQRKTRAKLEFAAPDEVGEHTLELFLMCDSYVGCDQEYAVDLMVGAAGSD 467 L+D+ R+ LL +P KMADVA FCN +PN+++ FEV ++DD+TAGD V + V LER+ +EDE E GKV APL+PK K E WW+++GD K+N LL++KRV+LQ+K + KL+F APDE G++ L LF M DSY+GCDQEY+V L V SD Sbjct: 37 LDDEVRNDLLRLPDHKMADVAVFCNNYPNIDVSFEVHDADDVTAGDAVQISVQLEREMDEDEMVDEASLGKVSAPLFPKEKNEGWWIIIGDTKRNVLLSLKRVSLQQKQKLKLQFMAPDEAGDYELTLFCMSDSYLGCDQEYSVPLSVAVGDSD 190
BLAST of mRNA_L-elsbetiae_contig18231.5273.1 vs. uniprot
Match: A0A7S0FRC3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FRC3_9STRA) HSP 1 Score: 172 bits (437), Expect = 1.520e-50 Identity = 85/155 (54.84%), Postives = 115/155 (74.19%), Query Frame = 3 Query: 6 LEDDERDRLLDMPQSKMADVANFCNAFPNVEMGFEVQESDDITAGDPVSLVVTLERDGEEDE-DEPE-GGWGKVCAPLYPKSKTEAWWVVVGDKKKNTLLAIKRVTLQRKTRAKLEFAAPDEVGEHTLELFLMCDSYVGCDQEYAVDLMVGAAGS 464 L+DD R+ LL +P KMADVA FCN +PNV++ FEVQ++D++TAGDPV+++V LER+ +E+E DE E G V APL+PK K E WW+VVGD K NTLL++KR++LQ + +EF AP+E G++ L LF M DSY+GCDQEY++ L V S Sbjct: 21 LDDDVRNNLLRLPDDKMADVAVFCNNYPNVDISFEVQDADEVTAGDPVTMLVKLEREIDEEEMDEEEISQLGVVSAPLFPKEKREGWWIVVGDTKTNTLLSLKRISLQTTQKVTVEFLAPEEAGDYDLTLFCMSDSYLGCDQEYSIPLSVAVGES 175
BLAST of mRNA_L-elsbetiae_contig18231.5273.1 vs. uniprot
Match: A0A7S1ZT27_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZT27_TRICV) HSP 1 Score: 178 bits (451), Expect = 4.850e-50 Identity = 89/158 (56.33%), Postives = 115/158 (72.78%), Query Frame = 3 Query: 6 LEDDERDRLLDMPQSKMADVANFCNAFPNVEMGFEVQESDDITAGDPVSLVVTLERDGEEDEDEPE--GGWGKVCAPLYPKSKTEAWWVVVGDKKKNTLLAIKRVTLQRKTRAKLEFAAPDEVGEHTLELFLMCDSYVGCDQEYAVDLMVGAAGSDDE 473 ++D+ R+ LL +P KMADVA FCN +PNV++ F VQ++DD+TAGDPV +VV LER+ +EDE E E G V APL+PK K E WW+V+GD K N+LL++KRV LQR + LEF AP+E G++ L LF M DSY+GCDQEY+V L V SDDE Sbjct: 246 IDDEVRNDLLRLPDEKMADVAVFCNNYPNVDVTFTVQDADDVTAGDPVQVVVKLEREIDEDEMEEEDLSQLGVVSAPLFPKEKREGWWIVIGDTKTNSLLSLKRVNLQRTQKVALEFMAPEEAGDYNLTLFCMSDSYLGCDQEYSVPLNVAVGESDDE 403
BLAST of mRNA_L-elsbetiae_contig18231.5273.1 vs. uniprot
Match: A0A7S2NTJ9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NTJ9_9STRA) HSP 1 Score: 181 bits (460), Expect = 1.710e-48 Identity = 85/154 (55.19%), Postives = 114/154 (74.03%), Query Frame = 3 Query: 6 LEDDERDRLLDMPQSKMADVANFCNAFPNVEMGFEVQESDDITAGDPVSLVVTLERDGEEDEDEPEGGWGKVCAPLYPKSKTEAWWVVVGDKKKNTLLAIKRVTLQRKTRAKLEFAAPDEVGEHTLELFLMCDSYVGCDQEYAVDLMVGAAGSD 467 L+D+ R+ LL +P KMADVA FCN +PN+++ FEV ++DD+TAGD V + V LER+ +EDE E GKV APL+PK K E WW+++GD K+N LL++KRV+LQ+K + KL+F APDE G++ L LF M DSY+GCDQEY+V L V SD Sbjct: 1579 LDDEVRNDLLRLPDHKMADVAVFCNNYPNIDVSFEVHDADDVTAGDAVQISVQLEREMDEDEMVDEASLGKVSAPLFPKEKNEGWWIIIGDTKRNVLLSLKRVSLQQKQKLKLQFMAPDEAGDYELTLFCMSDSYLGCDQEYSVPLSVAVGDSD 1732
BLAST of mRNA_L-elsbetiae_contig18231.5273.1 vs. uniprot
Match: A0A7S2E543_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E543_9STRA) HSP 1 Score: 179 bits (454), Expect = 1.100e-47 Identity = 90/157 (57.32%), Postives = 117/157 (74.52%), Query Frame = 3 Query: 6 LEDDERDRLLDMPQSKMADVANFCNAFPNVEMGFEVQESDDITAGDPVSLVVTLERDGEEDE-DEPE-GGWGKVCAPLYPKSKTEAWWVVVGDKKKNTLLAIKRVTLQRKTRAKLEFAAPDEVGEHTLELFLMCDSYVGCDQEYAVDLMVGAAGSDD 470 LED R+ LL +P KMADVA FCN +PN+++ F VQ++DD+ AGDPV ++VTLER+ +EDE DE E G V APL+PK K E WW+VVGD K N+LL++KRV+LQ+ + LEF AP+E G++ L LF M DSY+GCDQEY+V L V AA S+D Sbjct: 1828 LEDGVRNDLLRLPDEKMADVAVFCNNYPNIDVDFNVQDADDVVAGDPVQMIVTLEREVDEDEMDEDEINQMGLVAAPLFPKEKREGWWIVVGDTKTNSLLSLKRVSLQKIQKVALEFIAPEEAGDYNLTLFCMSDSYLGCDQEYSVPLSVAAAESED 1984
BLAST of mRNA_L-elsbetiae_contig18231.5273.1 vs. uniprot
Match: A0A1Z5K1K6_FISSO (Pre-mRNA-splicing helicase BRR2 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K1K6_FISSO) HSP 1 Score: 179 bits (453), Expect = 1.510e-47 Identity = 87/151 (57.62%), Postives = 112/151 (74.17%), Query Frame = 3 Query: 6 LEDDERDRLLDMPQSKMADVANFCNAFPNVEMGFEVQESDDITAGDPVSLVVTLERDGEEDEDEPEGGWGKVCAPLYPKSKTEAWWVVVGDKKKNTLLAIKRVTLQRKTRAKLEFAAPDEVGEHTLELFLMCDSYVGCDQEYAVDLMVGAA 458 LEDD R+ LL +P KMADVA FCN +PN+E+ + V+++D+ITAGD V +VVTLER+ +E E+ E GKV APL+P K EAWWVV+GD +TL +IKRV LQR+ + LEF AP+ G++ L LF M DSY+GCDQEY+V L VGAA Sbjct: 2009 LEDDVRNNLLQLPDDKMADVATFCNTYPNIEVTYTVEDADEITAGDAVKMVVTLEREIDEGEEVDEQELGKVVAPLFPGEKKEAWWVVIGDLANSTLFSIKRVNLQRRKQLTLEFLAPESAGDYDLTLFCMSDSYLGCDQEYSVSLNVGAA 2159
BLAST of mRNA_L-elsbetiae_contig18231.5273.1 vs. uniprot
Match: A0A7S4K326_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K326_9STRA) HSP 1 Score: 177 bits (449), Expect = 1.840e-47 Identity = 91/170 (53.53%), Postives = 121/170 (71.18%), Query Frame = 3 Query: 6 LEDDERDRLLDMPQSKMADVANFCNAFPNVEMGFEVQESDDITAGDPVSLVVTLERDGEEDE--------DEPEGGWGKVCAPLYPKSKTEAWWVVVGDKKKNTLLAIKRVTLQRKTRAKLEFAAPDEVGEHTLELFLMCDSYVGCDQEYAVDLMV--GAAGSDDESDED 485 L+DD RD LL +P KMADVA FCN +PN+++ F+V+++DD+TAGDPV +VV LER+ +ED +E G V APL+PK K E WW+V+GD K N+LL++KRV L+RK R LEF AP+E G++ L LF M DSY+GCDQEY+V L V G + S++ES ED Sbjct: 600 LDDDVRDDLLRLPDEKMADVAVFCNNYPNIDVEFDVRDADDVTAGDPVQIVVALEREVDEDXXXXXXXXXEEDMERLGVVSAPLFPKEKREGWWIVIGDTKTNSLLSLKRVGLKRKQRVTLEFVAPEEAGDYDLTLFCMSDSYLGCDQEYSVPLSVAIGESDSEEESSED 769
BLAST of mRNA_L-elsbetiae_contig18231.5273.1 vs. uniprot
Match: B5YNG2_THAPS (RNA or DNA helicase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YNG2_THAPS) HSP 1 Score: 178 bits (451), Expect = 2.790e-47 Identity = 90/169 (53.25%), Postives = 118/169 (69.82%), Query Frame = 3 Query: 6 LEDDERDRLLDMPQSKMADVANFCNAFPNVEMGFEVQESDDITAGDPVSLVVTLERD---------GEEDEDEPEGGWGKVCAPLYPKSKTEAWWVVVGDKKKNTLLAIKRVTLQRKTRAKLEFAAPDEVGEHTLELFLMCDSYVGCDQEYAVDLMVGAAGSDDESDED 485 LEDD R+ LL +P KMADVA FCN +PN+E+ F+VQ+++DITA DPV + V LER+ G+ D D +GKV APL+PK K E WW+V+GD K N+LL++KRVTLQR + LEF AP+E G++ L LF M DSY+GCDQEY+V + V SDD+S E+ Sbjct: 1922 LEDDVRNDLLRLPDEKMADVAVFCNNYPNIEVAFDVQDANDITASDPVQVSVKLEREVXXXXXXXXGQSDAD-----FGKVAAPLFPKEKREGWWIVIGDTKTNSLLSLKRVTLQRSQKVMLEFMAPEEPGDYNLTLFCMSDSYLGCDQEYSVPISVAVGESDDDSSEE 2085
BLAST of mRNA_L-elsbetiae_contig18231.5273.1 vs. uniprot
Match: A0A1U8AS49_NELNU (DExH-box ATP-dependent RNA helicase DExH12-like n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8AS49_NELNU) HSP 1 Score: 177 bits (449), Expect = 5.190e-47 Identity = 89/158 (56.33%), Postives = 111/158 (70.25%), Query Frame = 3 Query: 6 LEDDERDRLLDMPQSKMADVANFCNAFPNVEMGFEVQESDDITAGDPVSLVVTLERDGEEDEDEPEGGWGKVCAPLYPKSKTEAWWVVVGDKKKNTLLAIKRVTLQRKTRAKLEFAAPDEVGEHTLELFLMCDSYVGCDQEYAVDLMVGAAGSDDESD 479 +EDDER LL M S++ D+A FCN FPN++M +EV ESD + AGD V+L+VTLERD E + G V AP YPK+K E WW+VVGD K N LLAIKRV+LQRK++ KLEF+AP E G + L+ MCDSY+GCDQEY+ + GAA DD D Sbjct: 2025 MEDDERRELLQMSDSQLLDIARFCNRFPNIDMTYEVMESDSVRAGDDVTLLVTLERDLEGRSEV-----GPVDAPRYPKAKEEGWWLVVGDTKTNQLLAIKRVSLQRKSKVKLEFSAPSEAGRKSYTLYFMCDSYLGCDQEYSFSIEAGAADDDDGRD 2177 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18231.5273.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig18231.5273.1 >prot_L-elsbetiae_contig18231.5273.1 ID=prot_L-elsbetiae_contig18231.5273.1|Name=mRNA_L-elsbetiae_contig18231.5273.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=150bp MPQSKMADVANFCNAFPNVEMGFEVQESDDITAGDPVSLVVTLERDGEEDback to top mRNA from alignment at L-elsbetiae_contig18231:453..2664- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig18231.5273.1 ID=mRNA_L-elsbetiae_contig18231.5273.1|Name=mRNA_L-elsbetiae_contig18231.5273.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2212bp|location=Sequence derived from alignment at L-elsbetiae_contig18231:453..2664- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig18231:453..2664- >mRNA_L-elsbetiae_contig18231.5273.1 ID=mRNA_L-elsbetiae_contig18231.5273.1|Name=mRNA_L-elsbetiae_contig18231.5273.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=900bp|location=Sequence derived from alignment at L-elsbetiae_contig18231:453..2664- (Laminarionema elsbetiae ELsaHSoW15)back to top |