mRNA_L-elsbetiae_contig18190.5249.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig18190.5249.1 vs. uniprot
Match: D8LJL4_ECTSI (Ribonuclease Z n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJL4_ECTSI) HSP 1 Score: 288 bits (738), Expect = 6.480e-88 Identity = 158/222 (71.17%), Postives = 174/222 (78.38%), Query Frame = 1 Query: 10 QEYGNIDPAVRGGYDFLDASLMLSGPNAPRPSPHVAAAAARALARAGVLRATSVRVRHCAHAYALVLTVASTAXXXXXXXXXXXXXAH----TVXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGASKDWKLVYSGDCRPSETLVKEGKGAAVLIHEATFDETKQQEAYDKQHCTMPEALSMGQRMGAQRIILTHFSQRYPHMPTALTGGLGTNACLAFDNMR 663 +EYG++DP VRGGYDFLDASLM +G NAPRP PH+AAAAARALARAGVLRATSVRVRHCAHAYALVLTVASTAXXXXXXXX A T EGA KDWKLVYSGDCRPSE+LV+EGKGAAVLIHEATFDETKQQEA+DK+HCTM EA+++GQRMGA+R+ILTHFSQRYPHMP++L GGLGT CLAFDNMR Sbjct: 724 KEYGDVDPTVRGGYDFLDASLMQAGDNAPRPPPHIAAAAARALARAGVLRATSVRVRHCAHAYALVLTVASTAXXXXXXXXRAVFSAGPSVATNAVFGGRGGGVADSRATAQEGGDGSGVPGEGAGKDWKLVYSGDCRPSESLVREGKGAAVLIHEATFDETKQQEAFDKRHCTMQEAMAVGQRMGAERVILTHFSQRYPHMPSSLAGGLGTKVCLAFDNMR 945
BLAST of mRNA_L-elsbetiae_contig18190.5249.1 vs. uniprot
Match: A0A6H5LFG5_9PHAE (Ribonuclease Z n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LFG5_9PHAE) HSP 1 Score: 288 bits (738), Expect = 2.580e-87 Identity = 160/226 (70.80%), Postives = 176/226 (77.88%), Query Frame = 1 Query: 1 MQTQEYGNIDPAVRGGYDFLDASLMLSGPNAPRPSPHVAAAAARALARAGVLRATSVRVRHCAHAYALVLTVASTAXXXXXXXXXXXXXAH-----TVXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGASKDWKLVYSGDCRPSETLVKEGKGAAVLIHEATFDETKQQEAYDKQHCTMPEALSMGQRMGAQRIILTHFSQRYPHMPTALTGGLGTNACLAFDNMR 663 + ++EYG++DP VRGGYDFLDASLM +G NAPRP PH+AAAAARALARAGVLRATSVRVRHCAHAYALVLTVAST XXXXXXXXX A X EGA KDWKLVYSGDCRPSE LV+EGKGAAVLIHEATFDETKQQEA+DK+HCTM EAL++GQRMGA+R+ILTHFSQRYPHMP++L GGLGTN CLAFDNMR Sbjct: 830 VPSKEYGDVDPTVRGGYDFLDASLMQAGDNAPRPPPHIAAAAARALARAGVLRATSVRVRHCAHAYALVLTVASTXXXXXXXXXXAVFSASPSVAANAVFGGRXGGGGVADSQARQGGDDGSGVPGEGAGKDWKLVYSGDCRPSEPLVREGKGAAVLIHEATFDETKQQEAFDKRHCTMQEALTVGQRMGAKRVILTHFSQRYPHMPSSLAGGLGTNVCLAFDNMR 1055
BLAST of mRNA_L-elsbetiae_contig18190.5249.1 vs. uniprot
Match: A0A836CGF5_9STRA (Ribonuclease Z n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGF5_9STRA) HSP 1 Score: 117 bits (293), Expect = 1.500e-26 Identity = 59/96 (61.46%), Postives = 68/96 (70.83%), Query Frame = 1 Query: 382 WKLVYSGDCRPSETLVKEGKGAAVLIHEATFDETKQQEAYDKQHCTMPEALSMGQRMGAQRIILTHFSQRYPHMPTALTG--GLGTNACLAFDNMR 663 WKLVYSGD RP E LV+ G GA VLIHEATF++ KQQ+A DK+H T+ EAL + QRMGA R ILTHFSQRYP +P G A +AFD MR Sbjct: 735 WKLVYSGDTRPCEALVQAGMGATVLIHEATFEDAKQQDAVDKKHSTVSEALDVAQRMGAHRTILTHFSQRYPKLPVLPPSCYGADATALIAFDYMR 830
BLAST of mRNA_L-elsbetiae_contig18190.5249.1 vs. uniprot
Match: A0A7S4D8B2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8B2_HETAK) HSP 1 Score: 107 bits (267), Expect = 5.170e-26 Identity = 55/94 (58.51%), Postives = 64/94 (68.09%), Query Frame = 1 Query: 382 WKLVYSGDCRPSETLVKEGKGAAVLIHEATFDETKQQEAYDKQHCTMPEALSMGQRMGAQRIILTHFSQRYPHMPTALTGGLGTNACLAFDNMR 663 WKLVYSGDCRPS+ L + G+GA VLIHEATF+E K EA K+HCT+ EAL + + MGA R LTHFSQRYP P L +AFD MR Sbjct: 1 WKLVYSGDCRPSDRLAELGRGATVLIHEATFEEDKADEAEKKKHCTVGEALGVARNMGAFRSFLTHFSQRYPKFPV-LPEEDSFRTIIAFDFMR 93
BLAST of mRNA_L-elsbetiae_contig18190.5249.1 vs. uniprot
Match: A0A7S2C1Q9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C1Q9_9STRA) HSP 1 Score: 102 bits (254), Expect = 8.180e-24 Identity = 50/91 (54.95%), Postives = 66/91 (72.53%), Query Frame = 1 Query: 382 WKLVYSGDCRPSETLVKEGKGAAVLIHEATFDETKQQEAYDKQHCTMPEALSMGQRMGAQRIILTHFSQRYPHMPTALTGGLGTNACLAFD 654 WK+VYSGDCRPS+ LV+ G GA VLIHEATF+++ Q++A K+H T+ EA+ + RMGA R ILTHFSQRYP + + L + +AFD Sbjct: 3 WKVVYSGDCRPSDALVRAGIGATVLIHEATFEDSMQEDAVAKKHSTVSEAIDVACRMGAHRTILTHFSQRYPAL-SPLPEDVSGRVLVAFD 92
BLAST of mRNA_L-elsbetiae_contig18190.5249.1 vs. uniprot
Match: A0A1L7WP19_9HELO (Ribonuclease Z n=1 Tax=Phialocephala subalpina TaxID=576137 RepID=A0A1L7WP19_9HELO) HSP 1 Score: 109 bits (272), Expect = 9.360e-24 Identity = 55/96 (57.29%), Postives = 70/96 (72.92%), Query Frame = 1 Query: 382 WKLVYSGDCRPSETLVKEGKGAAVLIHEATFDETKQQEAYDKQHCTMPEALSMGQRMGAQRIILTHFSQRYPHMPTALT-GGLGTNACLAFDNMRC 666 +K+ YSGDCRPSE V+ GKGA +LIHEATFD+ Q +AY K+H T EAL +G++M A+RI+LTHFSQRY +P + GG A +AFD MRC Sbjct: 712 FKVAYSGDCRPSEDFVQIGKGATLLIHEATFDDELQGDAYAKKHSTTSEALEVGRQMNARRILLTHFSQRYQKIPVMDSHGGKDQVAIVAFDYMRC 807
BLAST of mRNA_L-elsbetiae_contig18190.5249.1 vs. uniprot
Match: A0A1E1K6D4_9HELO (Ribonuclease Z n=3 Tax=Rhynchosporium TaxID=38037 RepID=A0A1E1K6D4_9HELO) HSP 1 Score: 108 bits (270), Expect = 1.760e-23 Identity = 53/95 (55.79%), Postives = 67/95 (70.53%), Query Frame = 1 Query: 382 WKLVYSGDCRPSETLVKEGKGAAVLIHEATFDETKQQEAYDKQHCTMPEALSMGQRMGAQRIILTHFSQRYPHMPTALTGGLGTNACLAFDNMRC 666 +K+ YSGDCRPSE V+ GK A +LIHEATFD+ + +A K+H T EAL +G+RM A+RI+LTHFSQRY +P T G A +AFD MRC Sbjct: 787 FKVAYSGDCRPSERFVEIGKDATLLIHEATFDDELRSDAIAKKHSTTSEALGVGERMNARRILLTHFSQRYQKIPVMKTEGKDQVAIVAFDYMRC 881
BLAST of mRNA_L-elsbetiae_contig18190.5249.1 vs. uniprot
Match: A0A4T0W987_9PEZI (Ribonuclease Z n=1 Tax=Colletotrichum higginsianum TaxID=80884 RepID=A0A4T0W987_9PEZI) HSP 1 Score: 108 bits (269), Expect = 2.350e-23 Identity = 56/98 (57.14%), Postives = 70/98 (71.43%), Query Frame = 1 Query: 385 KLVYSGDCRPSETLVKEGKGAAVLIHEATFDETKQQEAYDKQHCTMPEALSMGQRMGAQRIILTHFSQRYPHMP-----TALTGGLGTNACLAFDNMR 663 K+ YSGDCRPS+ LV+ GKGA +LIHE+TFD+ KQ +A K+H TM EAL +G RMGA+R++LTHFSQRY +P T TG T +AFD MR Sbjct: 716 KIAYSGDCRPSDDLVEAGKGATLLIHESTFDDDKQGDALAKKHSTMSEALDVGYRMGARRVLLTHFSQRYAKIPLVEKRTTETGADQT-VLMAFDQMR 812
BLAST of mRNA_L-elsbetiae_contig18190.5249.1 vs. uniprot
Match: H1V291_COLHI (Ribonuclease Z n=2 Tax=Colletotrichum higginsianum (strain IMI 349063) TaxID=759273 RepID=H1V291_COLHI) HSP 1 Score: 108 bits (269), Expect = 2.470e-23 Identity = 56/98 (57.14%), Postives = 70/98 (71.43%), Query Frame = 1 Query: 385 KLVYSGDCRPSETLVKEGKGAAVLIHEATFDETKQQEAYDKQHCTMPEALSMGQRMGAQRIILTHFSQRYPHMP-----TALTGGLGTNACLAFDNMR 663 K+ YSGDCRPS+ LV+ GKGA +LIHE+TFD+ KQ +A K+H TM EAL +G RMGA+R++LTHFSQRY +P T TG T +AFD MR Sbjct: 939 KIAYSGDCRPSDDLVEAGKGATLLIHESTFDDDKQGDALAKKHSTMSEALDVGYRMGARRVLLTHFSQRYAKIPLVEKRTTETGADQT-VLMAFDQMR 1035
BLAST of mRNA_L-elsbetiae_contig18190.5249.1 vs. uniprot
Match: A0A5Q4BD95_9PEZI (Ribonuclease Z n=1 Tax=Colletotrichum shisoi TaxID=2078593 RepID=A0A5Q4BD95_9PEZI) HSP 1 Score: 108 bits (269), Expect = 2.510e-23 Identity = 56/98 (57.14%), Postives = 70/98 (71.43%), Query Frame = 1 Query: 385 KLVYSGDCRPSETLVKEGKGAAVLIHEATFDETKQQEAYDKQHCTMPEALSMGQRMGAQRIILTHFSQRYPHMP-----TALTGGLGTNACLAFDNMR 663 K+ YSGDCRPS+ LV+ GKGA +LIHE+TFD+ KQ +A K+H TM EAL +G RMGA+R++LTHFSQRY +P T TG T +AFD MR Sbjct: 1066 KIAYSGDCRPSDDLVEAGKGATLLIHESTFDDDKQGDALAKKHSTMSEALDVGYRMGARRVLLTHFSQRYAKIPLVEKRTTETGADQT-VLMAFDQMR 1162 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18190.5249.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig18190.5249.1 >prot_L-elsbetiae_contig18190.5249.1 ID=prot_L-elsbetiae_contig18190.5249.1|Name=mRNA_L-elsbetiae_contig18190.5249.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=229bp MQTQEYGNIDPAVRGGYDFLDASLMLSGPNAPRPSPHVAAAAARALARAGback to top mRNA from alignment at L-elsbetiae_contig18190:1961..2998- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig18190.5249.1 ID=mRNA_L-elsbetiae_contig18190.5249.1|Name=mRNA_L-elsbetiae_contig18190.5249.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1038bp|location=Sequence derived from alignment at L-elsbetiae_contig18190:1961..2998- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig18190:1961..2998- >mRNA_L-elsbetiae_contig18190.5249.1 ID=mRNA_L-elsbetiae_contig18190.5249.1|Name=mRNA_L-elsbetiae_contig18190.5249.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1374bp|location=Sequence derived from alignment at L-elsbetiae_contig18190:1961..2998- (Laminarionema elsbetiae ELsaHSoW15)back to top |