Homology
BLAST of mRNA_L-elsbetiae_contig18020.5170.1 vs. uniprot
Match:
A0A6H5JBQ1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JBQ1_9PHAE)
HSP 1 Score: 160 bits (405), Expect = 1.920e-44
Identity = 78/83 (93.98%), Postives = 79/83 (95.18%), Query Frame = 1
Query: 28 GAPALRWPAWWATGPAYGAMLCLVGLVGDLTASVFKRDAGFKDSGSLLPGHGGYLDRVDSYIFTAPPAYLFVTFILPLAAKLV 276
GA LRWPAWWATGPAYGAMLCLVGLVGDLTASVFKRDAGFKDSGSLLPGHGGYLDRVDSYIFTAPPAY+FV ILPLAAKLV
Sbjct: 528 GARLLRWPAWWATGPAYGAMLCLVGLVGDLTASVFKRDAGFKDSGSLLPGHGGYLDRVDSYIFTAPPAYIFVKLILPLAAKLV 610
BLAST of mRNA_L-elsbetiae_contig18020.5170.1 vs. uniprot
Match:
A0A836CA52_9STRA (Phosphatidate cytidylyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA52_9STRA)
HSP 1 Score: 132 bits (331), Expect = 1.580e-34
Identity = 60/78 (76.92%), Postives = 69/78 (88.46%), Query Frame = 1
Query: 40 LRWPAWWATGPAYGAMLCLVGLVGDLTASVFKRDAGFKDSGSLLPGHGGYLDRVDSYIFTAPPAYLFVTFILPLAAKL 273
L WP W+ TG YGAMLC++GLVGDLTAS+FKRDAGFKDSG++LPGHGGYLDRVDSYIFTAPPAYL++T LPL +L
Sbjct: 388 LSWPMWYLTGAIYGAMLCVIGLVGDLTASMFKRDAGFKDSGNILPGHGGYLDRVDSYIFTAPPAYLYITVALPLFRRL 465
BLAST of mRNA_L-elsbetiae_contig18020.5170.1 vs. uniprot
Match:
W7U3H9_9STRA (Phosphatidate cytidylyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3H9_9STRA)
HSP 1 Score: 119 bits (297), Expect = 6.220e-30
Identity = 54/78 (69.23%), Postives = 64/78 (82.05%), Query Frame = 1
Query: 40 LRWPAWWATGPAYGAMLCLVGLVGDLTASVFKRDAGFKDSGSLLPGHGGYLDRVDSYIFTAPPAYLFVTFILPLAAKL 273
L WP WW +GPAYG ML ++ LVGDLTAS+FKRDAG KDSG LLPGHGG LDR+DS++FT P AYLFV +LPLA ++
Sbjct: 333 LNWPLWWLSGPAYGLMLGVIALVGDLTASMFKRDAGLKDSGGLLPGHGGILDRIDSFMFTGPFAYLFVLVVLPLARRI 410
BLAST of mRNA_L-elsbetiae_contig18020.5170.1 vs. uniprot
Match:
A0A7S2KAI7_9STRA (Phosphatidate cytidylyltransferase (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KAI7_9STRA)
HSP 1 Score: 108 bits (271), Expect = 4.790e-29
Identity = 51/77 (66.23%), Postives = 60/77 (77.92%), Query Frame = 1
Query: 28 GAPALRWPAWWATGPAYGAMLCLVGLVGDLTASVFKRDAGFKDSGSLLPGHGGYLDRVDSYIFTAPPAYLFVTFILP 258
GA L WP WWATGP +G L L+GL+GDLTAS+ KRDAG KD G LLP HGG +DRVDSYIFTAP ++L +T +LP
Sbjct: 20 GAWVLNWPYWWATGPIHGLCLALLGLIGDLTASMLKRDAGLKDFGDLLPEHGGIMDRVDSYIFTAPYSWLVLTVVLP 96
BLAST of mRNA_L-elsbetiae_contig18020.5170.1 vs. uniprot
Match:
A0A482SP91_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SP91_9ARCH)
HSP 1 Score: 109 bits (272), Expect = 7.780e-29
Identity = 53/82 (64.63%), Postives = 62/82 (75.61%), Query Frame = 1
Query: 28 GAPALRWPAWWATGPAYGAMLCLVGLVGDLTASVFKRDAGFKDSGSLLPGHGGYLDRVDSYIFTAPPAYLFVTFILPLAAKL 273
GA ++WP W ATG YG ML ++ LVGDLTAS+ KRDA KDSGSLLPGHGG LDR+DSY+FTAP A+ F +LP A KL
Sbjct: 43 GAYVMQWPLWIATGTLYGIMLSVISLVGDLTASMMKRDAKMKDSGSLLPGHGGVLDRIDSYMFTAPAAFFFCRDVLPFALKL 124
BLAST of mRNA_L-elsbetiae_contig18020.5170.1 vs. uniprot
Match:
A0A7S2HB53_9STRA (Phosphatidate cytidylyltransferase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HB53_9STRA)
HSP 1 Score: 112 bits (279), Expect = 1.660e-28
Identity = 53/81 (65.43%), Postives = 62/81 (76.54%), Query Frame = 1
Query: 28 GAPALRWPAWWATGPAYGAMLCLVGLVGDLTASVFKRDAGFKDSGSLLPGHGGYLDRVDSYIFTAPPAYLFVTFILPLAAK 270
GA A++WP W TGPA+G +L L +VGDLTAS+FKRDAG KD G LLPGHGG LDR DSYI T P Y F+++ILPL AK
Sbjct: 170 GAKAMQWPLWAITGPAFGVLLGLTAVVGDLTASMFKRDAGLKDYGDLLPGHGGVLDRFDSYILTGPLVYFFMSYILPLVAK 250
BLAST of mRNA_L-elsbetiae_contig18020.5170.1 vs. uniprot
Match:
A0A7S0VRI1_9CRYP (Phosphatidate cytidylyltransferase n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VRI1_9CRYP)
HSP 1 Score: 114 bits (285), Expect = 4.160e-28
Identity = 52/75 (69.33%), Postives = 60/75 (80.00%), Query Frame = 1
Query: 28 GAPALRWPAWWATGPAYGAMLCLVGLVGDLTASVFKRDAGFKDSGSLLPGHGGYLDRVDSYIFTAPPAYLFVTFI 252
GA +RWP WW TGPAYG M+ +GL+GDLT S+FKRDAG KD+G+LLPGHGG LDRVDSY+ TA P Y FV FI
Sbjct: 354 GARLMRWPIWWFTGPAYGGMISSLGLLGDLTVSLFKRDAGVKDTGTLLPGHGGLLDRVDSYLLTAMPVYYFVKFI 428
BLAST of mRNA_L-elsbetiae_contig18020.5170.1 vs. uniprot
Match:
A0A0G4G1U8_9ALVE (Phosphatidate cytidylyltransferase n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4G1U8_9ALVE)
HSP 1 Score: 113 bits (283), Expect = 1.580e-27
Identity = 57/90 (63.33%), Postives = 65/90 (72.22%), Query Frame = 1
Query: 1 LCVRVRACGGAPALRWPAWWATGPAYGAMLCLVGLVGDLTASVFKRDAGFKDSGSLLPGHGGYLDRVDSYIFTAPPAYLFVTFILPLAAK 270
LC + + GA + WP W +G YG ML V L+GDLTAS FKRDAG KDSG +LPGHGG LDRVDSY+FTAP AY FV FILPL +K
Sbjct: 408 LCSLLLSVLGAWLMAWPLWPISGSIYGVMLAYVSLLGDLTASTFKRDAGLKDSGKILPGHGGLLDRVDSYLFTAPSAYFFVVFILPLFSK 497
BLAST of mRNA_L-elsbetiae_contig18020.5170.1 vs. uniprot
Match:
K9F1F5_9CYAN (Phosphatidate cytidylyltransferase n=6 Tax=Leptolyngbyaceae TaxID=1890438 RepID=K9F1F5_9CYAN)
HSP 1 Score: 109 bits (273), Expect = 2.840e-27
Identity = 48/79 (60.76%), Postives = 61/79 (77.22%), Query Frame = 1
Query: 22 CGGAPALRWPAWWATGPAYGAMLCLVGLVGDLTASVFKRDAGFKDSGSLLPGHGGYLDRVDSYIFTAPPAYLFVTFILP 258
C GA ++WP WW TGPA+G M+ + L+GDLT S+ KRDAG KDSG+L+PGHGG LDR DSY+FTAP + F+T +LP
Sbjct: 205 CTGAWLMQWPLWWITGPAFGTMIGVSSLLGDLTESLMKRDAGVKDSGTLIPGHGGILDRTDSYVFTAPLVFYFITMLLP 283
BLAST of mRNA_L-elsbetiae_contig18020.5170.1 vs. uniprot
Match:
A0A7S0TS08_HEMAN (Phosphatidate cytidylyltransferase n=3 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TS08_HEMAN)
HSP 1 Score: 112 bits (281), Expect = 3.210e-27
Identity = 51/75 (68.00%), Postives = 60/75 (80.00%), Query Frame = 1
Query: 28 GAPALRWPAWWATGPAYGAMLCLVGLVGDLTASVFKRDAGFKDSGSLLPGHGGYLDRVDSYIFTAPPAYLFVTFI 252
GA +RWP WW TGPAYG M+ +GL+GDLT S+FKRDAG KD+G++LPGHGG LDRVDSY+ TA P Y FV FI
Sbjct: 448 GARLMRWPIWWLTGPAYGFMISSLGLLGDLTVSLFKRDAGVKDTGNVLPGHGGLLDRVDSYLLTAMPVYYFVKFI 522
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18020.5170.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 1.92e-44 / Id = 93.98 Expect = 1.58e-34 / Id = 76.92 Expect = 6.22e-30 / Id = 69.23 Expect = 4.79e-29 / Id = 66.23 Expect = 7.78e-29 / Id = 64.63 Expect = 1.66e-28 / Id = 65.43 Expect = 4.16e-28 / Id = 69.33 Expect = 1.58e-27 / Id = 63.33 Expect = 2.84e-27 / Id = 60.76 Expect = 3.21e-27 / Id = 68.00 Sequence A0A6H5JBQ1_9PHAE A0A836CA52_9STRA W7U3H9_9STRA A0A7S2KAI7_9STRA A0A482SP91_9ARCH A0A7S2HB53_9STRA A0A7S0VRI1_9CRYP A0A0G4G1U8_9ALVE K9F1F5_9CYAN A0A7S0TS08_HEMAN
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota
Seed ortholog score 163.7
Seed ortholog evalue 4.1e-38
Seed eggNOG ortholog 2880.D7FLN3
KEGG rclass RC00002,RC00055,RC00523
KEGG ko ko:K00981,ko:K14163
KEGG Reaction R01799,R03661,R05578
KEGG Pathway ko00564,ko00860,ko00970,ko01100,ko01110,ko01120,ko04070,map00564,map00860,map00970,map01100,map01110,map01120,map04070
KEGG Module M00093,M00121,M00359
Hectar predicted targeting category signal peptide
GOs GO:0003674,GO:0003824,GO:0004605,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009165,GO:0009507,GO:0009526,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009941,GO:0009987,GO:0016020,GO:0016024,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0031967,GO:0031975,GO:0031976,GO:0031984,GO:0034357,GO:0034641,GO:0034654,GO:0042651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0046341,GO:0046471,GO:0046474,GO:0046483,GO:0046486,GO:0055035,GO:0055086,GO:0070567,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc. phosphatidate cytidylyltransferase activity
EggNOG OGs COG0575@1,KOG1440@2759
EC 2.7.7.41,6.1.1.15,6.1.1.17
COG Functional cat. I
Best tax level Eukaryota
Best eggNOG OG NA|NA|NA
BRITE ko00000,ko00001,ko00002,ko01000,ko03016
Exons 1
Model size 276
Cds size 276
Stop 0
Start 0
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815751.9335215-CDS-L-elsbetiae_contig18020:397..673 1622815751.9335215-CDS-L-elsbetiae_contig18020:397..673 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig18020 398..673 +
1691683079.659303-CDS-L-elsbetiae_contig18020:397..673 1691683079.659303-CDS-L-elsbetiae_contig18020:397..673 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig18020 398..673 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig18020.5170.1
>prot_L-elsbetiae_contig18020.5170.1 ID=prot_L-elsbetiae_contig18020.5170.1|Name=mRNA_L-elsbetiae_contig18020.5170.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=92bp
LCVRVRACGGAPALRWPAWWATGPAYGAMLCLVGLVGDLTASVFKRDAGF KDSGSLLPGHGGYLDRVDSYIFTAPPAYLFVTFILPLAAKLV back to top mRNA from alignment at L-elsbetiae_contig18020:398..673+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig18020.5170.1 ID=mRNA_L-elsbetiae_contig18020.5170.1|Name=mRNA_L-elsbetiae_contig18020.5170.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=276bp|location=Sequence derived from alignment at L-elsbetiae_contig18020:398..673+ (Laminarionema elsbetiae ELsaHSoW15)CTCTGTGTACGCGTGCGTGCGTGTGGCGGCGCCCCTGCACTCAGGTGGCC
GGCGTGGTGGGCCACGGGACCGGCGTACGGCGCCATGCTCTGCCTCGTGG
GTCTGGTGGGGGACCTGACCGCGTCGGTCTTCAAGCGCGACGCCGGGTTC
AAGGACTCGGGGAGCCTGCTGCCCGGGCACGGGGGCTACCTGGACCGCGT
CGACAGCTACATCTTCACGGCGCCCCCGGCGTACCTCTTCGTCACGTTCA
TCCTCCCGCTGGCCGCCAAGCTCGTG back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig18020:398..673+
>mRNA_L-elsbetiae_contig18020.5170.1 ID=mRNA_L-elsbetiae_contig18020.5170.1|Name=mRNA_L-elsbetiae_contig18020.5170.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=552bp|location=Sequence derived from alignment at L-elsbetiae_contig18020:398..673+ (Laminarionema elsbetiae ELsaHSoW15) CTCTGTGTACGCGTGCGTGCGTGTGGCGGCGCCCCTGCACTCAGGTGGCC GGCGTGGTGGGCCACGGGACCGGCGTACGGCGCCATGCTCTGCCTCGTGG GTCTGGTGGGGGACCTGACCGCGTCGGTCTTCAAGCGCGACGCCGGGTTC AAGGACTCGGGGAGCCTGCTGCCCGGGCACGGGGGCTACCTGGACCGCGT CGACAGCTACATCTTCACGGCGCCCCCGGCGTACCTCTTCGTCACGTTCA TCCTCCCGCTGGCCGCCAAGCTCGTGCTCTGTGTACGCGTGCGTGCGTGT GGCGGCGCCCCTGCACTCAGGTGGCCGGCGTGGTGGGCCACGGGACCGGC GTACGGCGCCATGCTCTGCCTCGTGGGTCTGGTGGGGGACCTGACCGCGT CGGTCTTCAAGCGCGACGCCGGGTTCAAGGACTCGGGGAGCCTGCTGCCC GGGCACGGGGGCTACCTGGACCGCGTCGACAGCTACATCTTCACGGCGCC CCCGGCGTACCTCTTCGTCACGTTCATCCTCCCGCTGGCCGCCAAGCTCG TG back to top