mRNA_L-elsbetiae_contig1801.5165.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1801.5165.1
Unique NamemRNA_L-elsbetiae_contig1801.5165.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1801.5165.1 vs. uniprot
Match: A0A6H5JM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM92_9PHAE)

HSP 1 Score: 481 bits (1238), Expect = 5.250e-162
Identity = 233/404 (57.67%), Postives = 279/404 (69.06%), Query Frame = 1
Query:    1 IGNGYCDSDNNNELCGYDGGDCCECTCTIPDGGGESSY--------GSCAGGFACIDPAAACVDDDDITADMIENCSYAGSIGNGRCDSANNNEICGYDGGDCCECTCAIPDGSDDF--------YG-CTDDFACIDPAAACVDDDDITADMVENCGSRLRFVSPGNGQCNSENNNELCGYDGGDCCECTCMVPDDSDDSSYACAYGFACIDPAAACVDDDDITADMVENCEYVGNIGDGYCQTENNNEICGYDGGDCCECTCTVPHRGDDPSYGCASGFACIDPAAACVEDDDITVNLLETCD-TVYMSDGRCHEFQNTPECNYDGGDCCACTCEDTPTQTCGEGGFACIDPSAPCVDDDDITVDMLANCDFAVNIGNGYCDAEINTPECNYDGGDCCECTCE 1158
            +G+GYCD DNNNE+CGYDGGDCCECTC      G+S +         S   GFACIDPAA CV+DDDITADM+ENC Y   +G+G C   NNNE+CGYDGGDCCECTC  P   DD+        YG C   FACIDP+AACVDDD++T  MVE+C +    VS G+G CN +NNNE C YDGGDCCECTC   +D+ ++       FACIDPAA CVDDD  T DM++NCEY G IG+G+C  +NNNE+C YDGGDCCECTC      +D  + C + FAC+DP A CV+DD +T+++LE C   V + DG C E  NTPEC YDGGDCCACTC++          FACIDP A CV+DDDITVDM  NC++ VN+G+G+CD   N   C YDGGDCCECTCE
Sbjct:   59 LGDGYCDQDNNNEICGYDGGDCCECTCVACKKHGQSPWDDDDDWLCSSGGSGFACIDPAAPCVEDDDITADMVENCGYVRGLGDGWCHEENNNELCGYDGGDCCECTCVAPPADDDWXXXXXXXXYGACGGGFACIDPSAACVDDDEVTVGMVESCDT----VSIGDGYCNMDNNNEACAYDGGDCCECTC---EDTPNNRCGRWSSFACIDPAAPCVDDDSFTVDMIDNCEYPGGIGNGWCDVDNNNELCAYDGGDCCECTCESL---EDDDWACRNNFACVDPNAPCVDDDSVTIDMLENCPWAVGIGDGYCSEDLNTPECAYDGGDCCACTCQNDVDDDWXXXXFACIDPEAACVNDDDITVDMFVNCEYPVNVGDGWCDQGNNNEACGYDGGDCCECTCE 452          
BLAST of mRNA_L-elsbetiae_contig1801.5165.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE)

HSP 1 Score: 393 bits (1009), Expect = 6.070e-129
Identity = 211/397 (53.15%), Postives = 247/397 (62.22%), Query Frame = 1
Query:   10 GYCDSDNNNELCGYDGGDCCECTCTIPDGGGESSYGSCAGGFACIDPAAACVDDDDITADMIENCSYAGSIGNGRCDSANNNEICGYDGGDCCECTCAIPDGS--DDFYGCTDD--FACIDPAAACVDDDDITADMVE----NCGSRLRFVSPGNGQCNSENNNELCGYDGGDCCECTCMVPDDSDDSSYACAY-GFACIDPAAACVDDDDITADMVENCEYVGNIGDGYCQTENNNEICGYDGGDCCECTCTVPH--RGDDPSYGCASG-FACIDPAAACVEDDDITVNLLETCD--TVYMSDGRCHEFQNTPECNYDGGDCCACTCEDTPTQTCGEGGFACIDPSAPCVDDDDITVDMLANCDFAVNIGNGYCDAEINTPECNYDGGDCCECTCE 1158
            G CD+ NNN  C YDGGDCC CTC         +Y     GF C+DP+A CVDDDDI  + ++NC    +IG+G CD  NN E C YDGGDCC CTC +PD    DD   C +   FACIDP A CV+DDD TA + E     CG  +  ++  +G C+  NNNE CGYDGGDCC CTC+      D  Y C   GFACIDP+A C DDDD+T D VENC  V +IGDG C  +NN E C YDGGDCC CTC VP    GDD S    S  FACIDP A CV DDDITV++++TC    +   DG C +  N  EC YD GDCC+CTC D  T  CG  GF C+DPSA CVDDD  +  +  +C  A  + NGYCD + N  EC YDGGDCCECTCE
Sbjct:   40 GECDTHNNNAECEYDGGDCCSCTCQ------NDTYDCGVSGFDCVDPSAECVDDDDIGTETVQNCGDPWAIGDGNCDKDNNTEECDYDGGDCCSCTCQVPDDGTGDDGSLCGESAVFACIDPDAPCVNDDDFTAFLPEVVKETCGGNIVHLA--DGDCDQINNNEECGYDGGDCCFCTCL------DDFYECGIRGFACIDPSAECADDDDVTVDTVENCG-VRSIGDGQCDLDNNREECHYDGGDCCSCTCQVPDDDSGDDGSLCSESTVFACIDPDAPCVNDDDITVDMMDTCGGHPINFGDGWCDDDNNNKECGYDSGDCCSCTCVDG-TYECGIVGFDCVDPSAECVDDDYPSTGVTDDCGNAGTVANGYCDFDNNKEECAYDGGDCCECTCE 420          
BLAST of mRNA_L-elsbetiae_contig1801.5165.1 vs. uniprot
Match: D7G0S4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S4_ECTSI)

HSP 1 Score: 375 bits (962), Expect = 2.570e-126
Identity = 187/308 (60.71%), Postives = 217/308 (70.45%), Query Frame = 1
Query:  265 GYDGGDCCECTCAIPDGSDDFYGC--TDD-FACIDPAAACVDDDDITADMVENCGSRLRFVSPGNGQCNSENNNELCGYDGGDCCECTCMVPDDSDDSSYACAYGFACIDPAAACVDDDDITADMVENCEYVGNIGDGYCQTENNNEICGYDGGDCCECTCTVPHRGDDPS-----YGCASGFACIDPAAACVEDDDITVNLLETCDTVYMSDGRCHEFQNTPECNYDGGDCCACTCEDTPTQTCGE-GGFACIDPSAPCVDDDDITVDMLANCDFAVNIGNGYCDAEINTPECNYDGGDCCECTCEV 1161
            G+DGGDCCECTC      DD Y C  TD  FAC+DP A CVDDDDIT +   NC  R  F   G+G C+ ENNNE+CGYDGGDCCECTC+   D D   Y+CA   ACIDP+A CVDDDD+T DMVENC YVG++G+G+C  ENNNE CGYDGGDCCECTC  P   DD +      GC +GFACIDP A CV DDDIT++++E CD+V + +G C    N   C YDGGDCC CTCED P Q CG   GFACIDP APCVD+D  TVDM+ +C +  + GNG+CD + N  EC YDGGDCCECTCEV
Sbjct:    5 GFDGGDCCECTCVSV--YDDDYSCSSTDSGFACVDPTAPCVDDDDITIEQALNCFPR-EF---GDGWCDQENNNEICGYDGGDCCECTCVNAWDDD---YSCAANSACIDPSAPCVDDDDVTVDMVENCGYVGSVGNGWCDEENNNEGCGYDGGDCCECTCQ-PLDTDDGTDDYFQNGCGNGFACIDPNAPCVNDDDITLDIVENCDSVAVGNGFCDMDNNNEACAYDGGDCCECTCEDQPNQECGRWSGFACIDPEAPCVDEDSFTVDMVESCKYPGSFGNGWCDEDNNIEECAYDGGDCCECTCEV 302          
BLAST of mRNA_L-elsbetiae_contig1801.5165.1 vs. uniprot
Match: A0A6H5KJK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJK5_9PHAE)

HSP 1 Score: 372 bits (956), Expect = 4.180e-119
Identity = 204/383 (53.26%), Postives = 242/383 (63.19%), Query Frame = 1
Query:   46 GYDGGDCCECTCTIPDGGGESSYGSCAGGFACIDPAAACVDDDDITADMIENCS----YAGSIGNGRCDSANNNEICGYDGGDCCECTCAIPDGSDDFYGCTD-DFACIDPAAACVDDDDITADMVENCGSRLRFVSP-GNGQCNSENNNELCGYDGGDCCECTCMVPDDSDDSSYACAYGFACIDPAAACVDDDDITADMVENCEYVGNIGDGYCQTENNNEICGYDGGDCCECTCTVPHRGDDPSYGCASGFACIDPAAACVEDDDITVNLLETCDTVYMSDGRCHEFQNTPECNYDGGDCCACTCEDTPTQT-----CGEGGFACIDPSAPCVDDDDITVDMLANCDFAVNIGNGYCDAEINTPECNYDGGDCCECTCEV 1161
            GYDGGDCCECTC       ++S+    GGFACIDP+AACVDDD+IT D+ E+C+    Y  SIG+G C   NNNE+C YDGGDCCECTC      D FY C    FACIDP+AACVDDD+ITAD+ E+C     +V+  GNG CN  NN E C YD GDCC+CTC +  +SDD S      FAC+DP A CVDDD +T  M E+C    N GDG+C   NNNE CGYDGGDCCECTC V    +   +GC   FACIDP A CV+DDD+T + LE C   Y+ DG C  + N   C+YDGGDCC CTC    T       C +  F CIDP+A C D+  ITVDM   CD  + +G+  C    N   C+YD GDCCE TC V
Sbjct:   18 GYDGGDCCECTCV------DASFTCGYGGFACIDPSAACVDDDNITEDIAESCNDGGGYVASIGDGFCSDENNNEVCDYDGGDCCECTCV-----DAFYPCGYVAFACIDPSAACVDDDNITADIAESCHDGGGYVAGLGNGYCNEANNIEECDYDAGDCCQCTCGI--ESDDLSDFSCVDFACVDPNAPCVDDD-VTEGMFEDCF---NFGDGFCNDYNNNEQCGYDGGDCCECTCVVDWSAE---FGCTE-FACIDPTAPCVDDDDVTADALENCMIEYLGDGYCDTYNNNEICDYDGGDCCECTCGSDSTDVLVGSDCSD--FVCIDPTASCFDES-ITVDMYEYCDVEL-LGDSICQPSNNFEVCDYDFGDCCEATCGV 375          
BLAST of mRNA_L-elsbetiae_contig1801.5165.1 vs. uniprot
Match: D7FI87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI87_ECTSI)

HSP 1 Score: 343 bits (881), Expect = 6.430e-110
Identity = 184/370 (49.73%), Postives = 219/370 (59.19%), Query Frame = 1
Query:  220 IGNGRCDSANNNEICGYDGGDCCECTCAIPDGSDDFYGCTDD---FACIDPAAACVDDDDITADMVENCGSRLRFVSPGNGQCNSENNNELCGYDGGDCCECTCMVPDDSDDSSYACAY---GFACIDPAAACVDDDDITADMVENCEYVGNIGDGYCQTENNNEICGYDGGDCCECTCTVPHRGDDPSY----------------GCASGFACIDPAAACVEDDDITV--------------------------------NLLETCDTVY-MSDGRCHEFQNTPECNYDGGDCCACTCEDTPTQTCGEGGFACIDPSAPCVDDDDITVDMLANCDFAVNIGNGYCDAE--INTPECNYDGGDCCECTCE 1158
             G+G C   NNN  CGYDGGDCCECTC  P G DD + C+ D   FACIDP A CVDDDDIT ++ +NC +       GNG C+ +NNNE+CGYD GDCCECTC+ P D DD  + C+    GFACIDPAA CVDDDD+T DMVENC YV  +GDG+C   NNNE+CGYDGGDCCECTC  P   DD                    C  GFACIDP AACV DDDITV                                +++E C+  + + DG C++  N   C YDGGDCC+CTC++          FACIDP A CV+DDDITVDM  NC++ V+IGNG+      +      YDGGDCC CTC+
Sbjct:   29 FGDGYCQLQNNNAECGYDGGDCCECTCQNPWGDDDEWFCSKDGYGFACIDPDAPCVDDDDITIEIAQNCVTS----DLGNGYCDEDNNNEICGYDFGDCCECTCVSPWDDDD--WYCSSDGSGFACIDPAAPCVDDDDVTIDMVENCGYVRGLGDGWCDDWNNNELCGYDGGDCCECTCVAPPANDDWDXXXXXXXXXXXXXXXXGACGGGFACIDPNAACVNDDDITVGMDTPSNKCGWRXXXXXXXXXXXXXXXXXXXXDMIENCEYPWGVGDGYCNQQNNNELCAYDGGDCCSCTCQNDFDDDWACTTFACIDPEAACVNDDDITVDMFVNCEYPVDIGNGWLRWRRLLRVHMRGYDGGDCCSCTCQ 392          
BLAST of mRNA_L-elsbetiae_contig1801.5165.1 vs. uniprot
Match: A0A6H5JXR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXR2_9PHAE)

HSP 1 Score: 341 bits (875), Expect = 2.650e-106
Identity = 220/499 (44.09%), Postives = 253/499 (50.70%), Query Frame = 1
Query:   40 LCGYDGGDCCECTCTIPDGGGESSYGSCAG-GFACIDPAAACVDDDDITADMIENCSYAGSIGNGRCDSANNNEICGYDGGDCCECTCAIPDGSDDFYGCTDDFACIDPAAACVDDDDITADMVENCGSRLRFVSPGNGQCNSENNNELCGYDGGDCCECTCMVPD-----DSDDSSYA-CAYGFACIDPAAACVDDDDITADMVENCEYVGNIGDGYCQTENNNEICGYDGGDCCECTCTVPHRGDDPSYGCA--SGFACIDPAAACVEDDDITVNLLETCD---------------------------------------------------------------------------------TVYM----------SDGRCHEFQNTPECN--------------------------YDGGDCCACTCEDTPTQTCGEGGFACIDPSAPCVDDDDITVDMLANCDFAVNIGNGYCDAEINTPECNYDGGDCCECTCE 1158
            L GYDGGDCCECTC  P G  +    S  G GFACIDP A+CVDDDDIT ++ +NC   G +G+G CD  NNNEICGYDGGDCCECTC  P   DD + C +  ACIDP A CVDDDDITA MVE CG  +R V  G+G C+ +NNNELCGYDGGDCCECTC  P      D DD  Y  C  GFACIDP A CV+DDDIT D+ E+C+ V N+GDGYC   NN E CG     C   +CT     D P+  C   SGFACIDP A CV+DD  TV++++ CD                                                                                 TV M           DG C E  NTPEC                           YD  D  +CT             FACIDP A CVDDDDITVDM+ NCD+ +++G+G+CD   N   C YDGGDCCECTCE
Sbjct:   18 LPGYDGGDCCECTCVNPWGDDDDWVCSKDGSGFACIDPDASCVDDDDITVEIAQNCDTWG-LGDGWCDQDNNNEICGYDGGDCCECTCVSPWDDDDDWACRNYNACIDPDAPCVDDDDITAVMVEECGW-VRGV--GDGWCDEDNNNELCGYDGGDCCECTCEAPPADDDWDWDDDWYGPCGSGFACIDPNAPCVNDDDITVDVDESCDAV-NMGDGYCDISNNIEACGA----CSWLSCT-----DTPNNKCGRWSGFACIDPEAPCVDDDSFTVDMIDNCDWGIGDGWCDEDNNNELCGDRVIEGWESIVNATAERVVRTTVVRCGVSVKWLDNELKEEIGERREVFKQFLSEAFEESWENVTVDMIENCSWSTGIGDGYCSENLNTPECATAPFVSLETVETRISLHLPLALRQNIYD--DDWSCT------------RFACIDPEAACVDDDDITVDMIENCDYPLSVGDGWCDKGNNNEACGYDGGDCCECTCE 488          
BLAST of mRNA_L-elsbetiae_contig1801.5165.1 vs. uniprot
Match: D7G3F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI)

HSP 1 Score: 306 bits (784), Expect = 1.490e-96
Identity = 166/282 (58.87%), Postives = 183/282 (64.89%), Query Frame = 1
Query:    1 IGNGYCDSDNNNELCGYDGGDCCECTCTIPDGGGESSYGSCAGGFACIDPAAACVDDDDITADMIENCSYAGSIGNGRCDSANNNEICGYDGGDCCECTCAIPDGSDDFYGCTDDFACIDPAAACVDDDDITADMVENCGSRLRFVSPGNGQCNSENNNELCGYDGGDCCECTCMVP---DDSDDSSYACAYGFACIDPAAACVDDDDITADMVENCEYVGNIGDGYCQTENNNEICGYDGGDCCECTCTVPHRGDDPSYGCAS---GFACIDPAAACVEDD 828
            IG+G+CD DNNNELC YDGGDCCECTC     G E     C   FAC+DP A CVDDD +T DMIENCS++  IG+G C    N   C YDGGDCC CTC  P   DD +GC   FACIDP AACVDDDDIT DM ENC      V  GNG C+  NN E CGYDGGDCCECTC      D  DD  Y C   FACIDP+A CVDDDDIT DMVENC YV  IG+G+C   NN E CGYDGGDCC CTC  P+   D  Y C+S    F C DP A+C  ++
Sbjct:   63 IGDGWCDEDNNNELCAYDGGDCCECTCE----GSEDDDWHCRN-FACVDPNAPCVDDDSVTIDMIENCSWSTGIGDGYCSENLNTPECAYDGGDCCSCTCESP--YDDDWGCMW-FACIDPEAACVDDDDITVDMFENCEYP---VDIGNGWCDEANNIEACGYDGGDCCECTCEYESPYDWDDDWDYHCME-FACIDPSAPCVDDDDITVDMVENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCESPY---DDDYSCSSEYGSFDCKDPNASCFGEE 329          
BLAST of mRNA_L-elsbetiae_contig1801.5165.1 vs. uniprot
Match: D7G4F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI)

HSP 1 Score: 288 bits (737), Expect = 7.580e-90
Identity = 140/245 (57.14%), Postives = 163/245 (66.53%), Query Frame = 1
Query:  445 GNGQCNSENNNELCGYDGGDCCECTCMVPDDSDDSSYACAY---GFACIDPAAACVDDDDITADMVENCEYVGNIGDGYCQTENNNEICGYDGGDCCECTCTVPHRGD---DPSYGCASGFACIDPAAACVEDDDITVNLLETCDTVYMSDGRCHEFQNTPECNYDGGDCCACTCEDTPTQTCG-EGGFACIDPSAPCVDDDDITVDMLANCDFAVNIGNGYCDAEINTPECNYDGGDCCECTCE 1158
            G+G C   NNN  CGYDGGDCCECTC  P   D   + C+    GFAC+DP A C  +D +T +  + C++  ++GDG+C   NNNE+CGYDGGDCCECTC VP   D   D    C  GFACIDP+A CV DDDITV++ E+CD V M DG C    N   C YDGGDCC CTCE  P   CG   GFACIDP APCVDDD +TVDM+ NCD+   +GNG+CD E N   C YDGGDCCECTCE
Sbjct:   37 GDGYCTPPNNNAECGYDGGDCCECTCQNPQGGD-HHWICSKNGSGFACVDPDAPCYAEDGVTVEASQECDF-WDLGDGWCDQVNNNELCGYDGGDCCECTCEVPTDDDWDNDLYVACGEGFACIDPSAPCVNDDDITVDVDESCDAVGMGDGYCDMDNNNAACAYDGGDCCECTCE--PNNKCGGRSGFACIDPGAPCVDDDSVTVDMIDNCDYLRVMGNGWCDEENNNELCAYDGGDCCECTCE 277          
BLAST of mRNA_L-elsbetiae_contig1801.5165.1 vs. uniprot
Match: D8LEP6_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP6_ECTSI)

HSP 1 Score: 270 bits (691), Expect = 3.170e-84
Identity = 138/267 (51.69%), Postives = 165/267 (61.80%), Query Frame = 1
Query:  394 TADMVENCGSRLRFVSPGNGQCNSENNNELCGYDGGDCCECTCMVPDDSDDSSYACA--YGFACIDPAAACVDDDDITADMVENCEYVGNIGDGYCQTENNNEICGYDGGDCCECTCTVPHRGD--DPSYGCASG----FACIDPAAACVEDDDITVNLLETCDTVYMSDGRCHEFQNTPECNYDGGDCCACTCE---DTPTQTCGEGGFACIDPSAPCVDDDDITVDMLANCDFAVNIGNGYCDAEINTPECNYDGGDCCECTCEV 1161
            T+D  + C +       GNG+CN  NN E CG+DGGDCCECTC      +D  Y C   YG+ACIDP A CVDDD +T DM+ENC     IG+G C +  NNE C YDGGDCCECTC  P R    D   GC +G    FACIDP A CV+DD +T  +++ C T  + +G C +  N+PEC YDGGDCC CTCE   D     C  G FACIDP A CVDDDD T +   +C +   IG+G CD E N  EC +DGGDCC+CTC V
Sbjct:   85 TSDQFDACDAAQDI---GNGRCNMGNNIEECGFDGGDCCECTC------EDGEYTCGQYYGYACIDPDATCVDDDAVTVDMMENCYDPSRIGNGACDSLLNNEDCAYDGGDCCECTCD-PSRYPWYDSGVGCQTGMYGGFACIDPDAPCVDDDIVTAEMMDLCSTGQIGNGYCDDSNNSPECAYDGGDCCECTCESHDDGYEYYCEPGSFACIDPEAECVDDDDNTAEQYEHCGWVTRIGDGMCDDENNKEECGFDGGDCCDCTCVV 341          
BLAST of mRNA_L-elsbetiae_contig1801.5165.1 vs. uniprot
Match: D7FSR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSR3_ECTSI)

HSP 1 Score: 229 bits (585), Expect = 9.680e-70
Identity = 136/261 (52.11%), Postives = 158/261 (60.54%), Query Frame = 1
Query:  244 ANNNEICGYDGGDCCECTCAIPDGSDDF--YGCTDDFACIDPAAACVDDDDITADMVENCGSRLRFVSPGNGQCNSENNNELCGYDGGDCCECTCMVPDDSDDSSYACAYGFACIDPAAACVDDDDITADMVENC--EYVGNIGDGYCQTENNNEICGYDGGDCCECTCTVPHRGDDPSYGCASGFACIDPAAACVEDDDITVNLLETCDTVYMSDGRCHEFQNTPECNYDGGDCCACTCEDTPTQTCGE---GGFACIDP 1005
            ANN E C YD GDCC+CTC I   SDD   + C D FAC+DP A CVDDD +T  M E+C     F   G+G CN  NNNE CGYDGGDCCECTC+V   ++   + C   FACIDP A CVDDDD+TAD +ENC  EY   +GDGYC T NN EIC YDGGDCCECTC      D           CIDP A+C  D++ITV++ E CD   + D  C+   N   C+YD GDCC  TC    + T  E     FACIDP
Sbjct:    4 ANNIEECDYDAGDCCQCTCGIE--SDDLPDFSCVD-FACVDPNAPCVDDD-VTEGMFEDC---FNF---GDGFCNDYNNNEQCGYDGGDCCECTCVVDWSAE---FGCTE-FACIDPTAPCVDDDDVTADALENCMMEY---LGDGYCDTYNNIEICDYDGGDCCECTCGSDST-DVLDXXXXXXXXCIDPTASCF-DENITVDMYEYCDVELLGDSICNLSNNFEVCDYDFGDCCEATCGVDSSGTLDELSCSSFACIDP 245          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1801.5165.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JM92_9PHAE5.250e-16257.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTT4_9PHAE6.070e-12953.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0S4_ECTSI2.570e-12660.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJK5_9PHAE4.180e-11953.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI87_ECTSI6.430e-11049.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JXR2_9PHAE2.650e-10644.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3F4_ECTSI1.490e-9658.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G4F9_ECTSI7.580e-9057.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LEP6_ECTSI3.170e-8451.69Uncharacterized protein n=3 Tax=Ectocarpus silicul... [more]
D7FSR3_ECTSI9.680e-7052.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1801contigL-elsbetiae_contig1801:7000..10926 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score183.0
Seed ortholog evalue2.7e-43
Seed eggNOG ortholog2880.D7G5Y7
Hectar predicted targeting categoryother localisation
EggNOG OGs2BFIX@1,2S176@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size1161
Cds size1161
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815751.5308986-CDS-L-elsbetiae_contig1801:6999..70401622815751.5308986-CDS-L-elsbetiae_contig1801:6999..7040Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1801 7000..7040 -
1691683079.3895261-CDS-L-elsbetiae_contig1801:6999..70401691683079.3895261-CDS-L-elsbetiae_contig1801:6999..7040Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1801 7000..7040 -
1622815751.544891-CDS-L-elsbetiae_contig1801:7744..77991622815751.544891-CDS-L-elsbetiae_contig1801:7744..7799Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1801 7745..7799 -
1691683079.4051383-CDS-L-elsbetiae_contig1801:7744..77991691683079.4051383-CDS-L-elsbetiae_contig1801:7744..7799Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1801 7745..7799 -
1622815751.5595157-CDS-L-elsbetiae_contig1801:8041..81901622815751.5595157-CDS-L-elsbetiae_contig1801:8041..8190Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1801 8042..8190 -
1691683079.4159155-CDS-L-elsbetiae_contig1801:8041..81901691683079.4159155-CDS-L-elsbetiae_contig1801:8041..8190Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1801 8042..8190 -
1622815751.5703459-CDS-L-elsbetiae_contig1801:8998..92531622815751.5703459-CDS-L-elsbetiae_contig1801:8998..9253Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1801 8999..9253 -
1691683079.425535-CDS-L-elsbetiae_contig1801:8998..92531691683079.425535-CDS-L-elsbetiae_contig1801:8998..9253Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1801 8999..9253 -
1622815751.580245-CDS-L-elsbetiae_contig1801:9555..97971622815751.580245-CDS-L-elsbetiae_contig1801:9555..9797Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1801 9556..9797 -
1691683079.434161-CDS-L-elsbetiae_contig1801:9555..97971691683079.434161-CDS-L-elsbetiae_contig1801:9555..9797Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1801 9556..9797 -
1622815751.592456-CDS-L-elsbetiae_contig1801:10118..103141622815751.592456-CDS-L-elsbetiae_contig1801:10118..10314Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1801 10119..10314 -
1691683079.4441257-CDS-L-elsbetiae_contig1801:10118..103141691683079.4441257-CDS-L-elsbetiae_contig1801:10118..10314Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1801 10119..10314 -
1622815751.6037347-CDS-L-elsbetiae_contig1801:10703..109261622815751.6037347-CDS-L-elsbetiae_contig1801:10703..10926Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1801 10704..10926 -
1691683079.453473-CDS-L-elsbetiae_contig1801:10703..109261691683079.453473-CDS-L-elsbetiae_contig1801:10703..10926Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1801 10704..10926 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1801.5165.1prot_L-elsbetiae_contig1801.5165.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1801 7000..10926 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1801.5165.1

>prot_L-elsbetiae_contig1801.5165.1 ID=prot_L-elsbetiae_contig1801.5165.1|Name=mRNA_L-elsbetiae_contig1801.5165.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=387bp
IGNGYCDSDNNNELCGYDGGDCCECTCTIPDGGGESSYGSCAGGFACIDP
AAACVDDDDITADMIENCSYAGSIGNGRCDSANNNEICGYDGGDCCECTC
AIPDGSDDFYGCTDDFACIDPAAACVDDDDITADMVENCGSRLRFVSPGN
GQCNSENNNELCGYDGGDCCECTCMVPDDSDDSSYACAYGFACIDPAAAC
VDDDDITADMVENCEYVGNIGDGYCQTENNNEICGYDGGDCCECTCTVPH
RGDDPSYGCASGFACIDPAAACVEDDDITVNLLETCDTVYMSDGRCHEFQ
NTPECNYDGGDCCACTCEDTPTQTCGEGGFACIDPSAPCVDDDDITVDML
ANCDFAVNIGNGYCDAEINTPECNYDGGDCCECTCEV
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mRNA from alignment at L-elsbetiae_contig1801:7000..10926-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1801.5165.1 ID=mRNA_L-elsbetiae_contig1801.5165.1|Name=mRNA_L-elsbetiae_contig1801.5165.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3927bp|location=Sequence derived from alignment at L-elsbetiae_contig1801:7000..10926- (Laminarionema elsbetiae ELsaHSoW15)
ATAGGCAACGGCTATTGCGATTCCGACAACAACAACGAGCTCTGCGGATA CGACGGTGGAGACTGCTGCGAGTGTACCTGCACGATCCCTGATGGTGGCG GCGAGTCTTCCTACGGCTCTTGCGCCGGCGGTTTCGCCTGCATCGACCCG GCCGCGGCATGCGTGGACGATGACGATATCACCGCGGACATGATCGAAAA CTGCAGCTACGCCGGAAGCATCGGTACGCGAACCGCCAATTAATTGACGA CAACTTGTCGTTTTCAACCTGTTTCAGCTGAATGGTGCGACCGACACTAT GTAGTCTCAAAAAATCATCCGCGTTTCTCCCACATCTAGATAAGGTGGAA CCCTAACCAATGGAAGAATTACGTAATACAATAGCGGAGCACCTTCGGCC TTATTACATCAGTATTTATCCATTGATGGCGGCGTGAATACCCCTGCCAA CAAACGGCACATCTAAAGCTTGTGCACAAGCCTCAAGCGTTGGCGTCCCT CTTCGACCTTGAACGGATAGCTTACGTAGAAATACTCGAAGTTTTGCGTC ACCTGACCATCGATTCAAACAGGAAGATACCACCTTGCGCCAATGGTTCG GACGTTTCCCAGGCAATGGTCGTTGCGACTCTGCAAATAACAACGAAATC TGTGGATACGACGGCGGAGACTGCTGCGAGTGTACGTGCGCGATCCCTGA CGGCAGCGACGATTTCTACGGCTGCACGGATGATTTCGCCTGTATCGATC CAGCCGCAGCCTGTGTGGACGATGACGACATCACCGCTGACATGGTCGAA AATTGCGGGTACATCGAAGGCGTCGGTAAGGCCAATGCCCTGCCAAAGCT GTCGGCCCATTCCATTTTCACCCGCCGTACACCTTTTGAAAACGTAGCTT CCGACAGACAAATTTTCGGATGAAATCCAGTTTTCCACTTGTCCTGTAAG CGCCAAGACCAACAACGGCAGCCTGGTTGTACACGGCGCAACCAGCGGAG GTTGCCATGACAACAGGGAAATAGCTCTAATGCGTCCAGACCACTCGTCA ACTCTTCAGATAGGCTGCAAATACCCTACAACAATTTTAGTAGACGCGAT CAACCACCCACAATGTCTTTGAACACGAGCTCTCGCCTTCGCTTCGTATC CCCAGGCAATGGTCAATGCAATTCCGAAAACAACAACGAACTCTGTGGAT ACGACGGCGGAGACTGCTGCGAGTGCACCTGCATGGTCCCCGACGACAGC GACGATTCTTCTTACGCCTGCGCGTATGGTTTCGCCTGCATCGACCCGGC CGCAGCATGCGTGGACGATGACGACATCACCGCTGACATGGTTGAAAACT GTGAATACGTCGGAAACATTGGTAAGTGTCCCGCCAAATCACGAATGTGT TGTTTTCGACCCCGTAGCGTCAGCTACGTGGGACCAAACCGAAGTTTGGT TCCAAAACATCACCTGCGTTTCTCCAAAGGCAACGTTGAAATCAGTTGAA GCCGGTGCACAAGCTCCAAAGCGTTGGCGTCCCTATTGAACCTTGTGTGG ATGGTTTCGAAATATCTGAAGGGTTGCGTCACCTGATCATTGACTCGAAC AGCACACATTTCTTGTACTATCGGTGTAGACACTGACGTTCCTCGCTGCC TCGATATATTGGACGTTTCCCAGGCGATGGTTATTGCCAGACTGAAAATA ACAACGAAATCTGTGGATACGACGGCGGAGACTGCTGCGAGTGTACGTGC ACGGTCCCTCACAGGGGCGACGATCCTTCTTACGGCTGCGCGTCTGGTTT CGCCTGCATCGACCCGGCCGCGGCCTGTGTGGAAGATGACGACATCACAG TGAACCTCTTGGAGACCTGCGATACAGTCTACATGTCCGACGGAAGATGC CACGAATTCCAAAACACGCCTGAGTGCAGTGAGTCAATGTCCTTGACGAT GATGGAAGTAGAGTCGGTTTTAGCGGTATGCGTCGAATATCGCCGCGTTT TTATCACACGCACGGTTCAATGATGTAGATTATATTTCCCGGTTACTAGC TCTCACCCCCACACAGTGTTTCACATTATTTTAGACACCACACGATCACT CTCCAACGGACTAAGACCAGCACCGTTGGAGTTCACCCCCTTGGGGGGTT GACATCGGTTGGCAACGGCTCTGTAGACCACACCAGTCATCGGCAGCCAG GTTTTTGCGTTTGCCTTGTTTGCAATCGTTTGTGGAAACTTTTCATGGCT GTCGAGTTGTGGAATGCGGTGCGTGTCAAGCCTTCGCAACGAAGTGATCG AACAAAGTCCATAGTGTTCAATTGGCCGGGCACCCGCGAGCAGTGTGCGT GTAGCCCATATCTGTCCCTGGAAGCGGGGACCCCAGCCCATAAAGTGAGT CCGTTCGATGCTGCAATCCAATGCCGAACATCCGTGGCTAGGATTCGGCT CACCTTTCATGTGACCGCTGGGAAATACCACGGCGTTTTATCATGCTTGT TGTGTGGTGCCATGCGAGATTGTCCGGCAAAACGCCTCGGCGTACTCTTG CCCCTGCTCTGTGGGGATGCGAGGTCCCGTGGTCTAGCCGCTACGACACG CATAACTCAATGGCTATTCCACCGACGGCGCACCCAAAGAAGCAATCGCT CGCGAATCGATCGTTGACTCGGCTCGTCTTGTTATTTCCGTGCCCTAATC TGCCCTGTCCTGCCGTTTTCTCTGCACTTGTCCAAGACTACGATGGCGGA GACTGTTGCGCCTGCACTTGTGAGGACACGCCCACTCAGACTTGTGGCGA GGGAGGTTTCGCTTGCATCGACCCTTCAGCCCCTTGCGTGGATGACGATG ACATCACCGTCGACATGCTCGCGAACTGCGACTTCGTAAGTTTGGCCATC AATGCGACTGGTACACCGCAGTATTATGCTTTTCTGCTGGAATGCGTCCC AAAGCATGCTTTAGCTTTTTTGTATTTGCTGCAGCGCTGTTGGAGGAGGG GCACATCGCGCGTCGCACGTCGTTGGAGGTTAAGTTGACGCAAGGCTGTT GCTGCTTCTCTCAGGAAACTGCAACTGTGCTTTTCAAGACTCTTACCCCT CTAATGTGCCTCCTTCGTGTCCGGCAGGCTGTCAACATCGGCAATGGATA CTGCGATGCTGAGATAAACACACCAGAATGCAGTGAGTTTCTTTTCAGAT CGATGACGTAGCATCGAAGGCGTGAGCTATGTAGGTGGCGCGTAGAACTC AGCCGGTTGTCGAAGTAAAAACCTCCAGTCGCTCCAAACTGTTTGAGGTC GTCCTCCAGGAAGTACCTACGGCTGCATCACGCTGAGCTCACTGCGCCCT GTTACGCCTGCCTCCGTTACGAATGCTCGGACTTTCAGTAGCTCCGTGCT GTCTCACACTCGCCCTGATGCTAAATTGTCGCTTCGACGCTGCCCCTGGT CACTCGTTGTTCGACATGGTTGTTGACATGATGTAGCGTCGGGAGTTGCG TATTACGGAGGTACAGCGCATCGTAGCGACTTGAAAGAGGAGCGAGGGTG TTTTCACGGTAGATATGGCAGCAGCCGTGGTCGTAGTCGTGGTCGTAACG TGGCGTGGCGTACTGCAAAGTGCGCTGACCTTCCCGTGTATTGCAAACCG CGCCTGAGCCCTTCCTTCAACGCCTCCGATGGCCAAATGTGTGACTCAGG TATCATCCCAGCATTTTTAGACTTTTTCCCTCCCCCCCTGCCGTCAATCG GACAAATGACGACGGCTATTCCGCGTTCGGACATCGTGGTCAAAAGCCGA TTTATCAGTCAACCAGACAAACCATAACACTCGTTCTTTGCTCATCTTCT CGCGTTGCCCATTGACATCCTTTGGCTTTCGTCAAGACTACGATGGCGGA GACTGTTGCGAATGCACGTGCGAGGTG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1801:7000..10926-

>mRNA_L-elsbetiae_contig1801.5165.1 ID=mRNA_L-elsbetiae_contig1801.5165.1|Name=mRNA_L-elsbetiae_contig1801.5165.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2322bp|location=Sequence derived from alignment at L-elsbetiae_contig1801:7000..10926- (Laminarionema elsbetiae ELsaHSoW15)
ATAGGCAACGGCTATTGCGATTCCGACAACAACAACGAGCTCTGCGGATA
CGACGGTGGAGACTGCTGCGAGTGTACCTGCACGATCCCTGATGGTGGCG
GCGAGTCTTCCTACGGCTCTTGCGCCGGCGGTTTCGCCTGCATCGACCCG
GCCGCGGCATGCGTGGACGATGACGATATCACCGCGGACATGATCGAAAA
CTGCAGCTACGCCGGAAGCATCGATAGGCAACGGCTATTGCGATTCCGAC
AACAACAACGAGCTCTGCGGATACGACGGTGGAGACTGCTGCGAGTGTAC
CTGCACGATCCCTGATGGTGGCGGCGAGTCTTCCTACGGCTCTTGCGCCG
GCGGTTTCGCCTGCATCGACCCGGCCGCGGCATGCGTGGACGATGACGAT
ATCACCGCGGACATGATCGAAAACTGCAGCTACGCCGGAAGCATCGGCAA
TGGTCGTTGCGACTCTGCAAATAACAACGAAATCTGTGGATACGACGGCG
GAGACTGCTGCGAGTGTACGTGCGCGATCCCTGACGGCAGCGACGATTTC
TACGGCTGCACGGATGATTTCGCCTGTATCGATCCAGCCGCAGCCTGTGT
GGACGATGACGACATCACCGCTGACATGGTCGAAAATTGCGGGCAATGGT
CGTTGCGACTCTGCAAATAACAACGAAATCTGTGGATACGACGGCGGAGA
CTGCTGCGAGTGTACGTGCGCGATCCCTGACGGCAGCGACGATTTCTACG
GCTGCACGGATGATTTCGCCTGTATCGATCCAGCCGCAGCCTGTGTGGAC
GATGACGACATCACCGCTGACATGGTCGAAAATTGCGGCTCTCGCCTTCG
CTTCGTATCCCCAGGCAATGGTCAATGCAATTCCGAAAACAACAACGAAC
TCTGTGGATACGACGGCGGAGACTGCTGCGAGTGCACCTGCATGGTCCCC
GACGACAGCGACGATTCTTCTTACGCCTGCGCGTATGGTTTCGCCTGCAT
CGACCCGGCCGCAGCATGCGTGGACGATGACGACATCACCGCTGACATGG
TTGAAAACTGTGAATACGTCGGAAACATTGCTCTCGCCTTCGCTTCGTAT
CCCCAGGCAATGGTCAATGCAATTCCGAAAACAACAACGAACTCTGTGGA
TACGACGGCGGAGACTGCTGCGAGTGCACCTGCATGGTCCCCGACGACAG
CGACGATTCTTCTTACGCCTGCGCGTATGGTTTCGCCTGCATCGACCCGG
CCGCAGCATGCGTGGACGATGACGACATCACCGCTGACATGGTTGAAAAC
TGTGAATACGTCGGAAACATTGGCGATGGTTATTGCCAGACTGAAAATAA
CAACGAAATCTGTGGATACGACGGCGGAGACTGCTGCGAGTGTACGTGCA
CGGTCCCTCACAGGGGCGACGATCCTTCTTACGGCTGCGCGTCTGGTTTC
GCCTGCATCGACCCGGCCGCGGCCTGTGTGGAAGATGACGACATCACAGT
GAACCTCTTGGAGACCTGCGATACAGTCTACATGTCCGACGGAAGATGCC
ACGAATTCCAAAACACGCCTGAGTGCAGCGATGGTTATTGCCAGACTGAA
AATAACAACGAAATCTGTGGATACGACGGCGGAGACTGCTGCGAGTGTAC
GTGCACGGTCCCTCACAGGGGCGACGATCCTTCTTACGGCTGCGCGTCTG
GTTTCGCCTGCATCGACCCGGCCGCGGCCTGTGTGGAAGATGACGACATC
ACAGTGAACCTCTTGGAGACCTGCGATACAGTCTACATGTCCGACGGAAG
ATGCCACGAATTCCAAAACACGCCTGAGTGCAACTACGATGGCGGAGACT
GTTGCGCCTGCACTTGTGAGGACACGCCCACTCAGACTTGTGGCGAGGGA
GGTTTCGCTTGCATCGACCCTTCAGCCCCTTGCGTGGATGACGATGACAT
CACCGTCGACATGCTCGCGAACTGCGACTTCACTACGATGGCGGAGACTG
TTGCGCCTGCACTTGTGAGGACACGCCCACTCAGACTTGTGGCGAGGGAG
GTTTCGCTTGCATCGACCCTTCAGCCCCTTGCGTGGATGACGATGACATC
ACCGTCGACATGCTCGCGAACTGCGACTTCGCTGTCAACATCGGCAATGG
ATACTGCGATGCTGAGATAAACACACCAGAATGCAGCTGTCAACATCGGC
AATGGATACTGCGATGCTGAGATAAACACACCAGAATGCAACTACGATGG
CGGAGACTGTTGCGAATGCACGTGCGAGGTGACTACGATGGCGGAGACTG
TTGCGAATGCACGTGCGAGGTG
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