mRNA_L-elsbetiae_contig18.5156.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig18.5156.1 vs. uniprot
Match: D7G1F2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1F2_ECTSI) HSP 1 Score: 234 bits (597), Expect = 5.810e-73 Identity = 150/254 (59.06%), Postives = 184/254 (72.44%), Query Frame = 1 Query: 1 MASTLGILDVLGRLREESERASTALAAQEDTNRSLLHRCTEAEAESGRTVAVKDALHKQKTRLDEGRMVAECKRQEVESRFKRLQAQQAGREHAAACRRQAAVAAADDAVESSRRFRADAAASVRQIRELRARLQDKRVELESVREKKNELDEEIKAKKTTRDKINAEVASQAEAIATACSAVEDTELENKATLAKAKQTEGEARSTHKKLVEETRQARQEMQEMAAGLQKKNAILRNELRHLKRQVGGDGSVQ 762 MASTLG+LDVL +LREESERASTAL AQ++TNR+LL +C EAE ESGRT K+AL +K +L++G AE R+E E R +RLQ QQA R+ AAA R+ AA AV S+RFRADA VRQI ELRARL+DKR ELES E K ELD EI KK TRD + AEV SQ EA+A +CS V+D + ENK+ LA+AK+ EGE ++E R+A++EMQEMA GLQ+KNAILR+ELRHLKR++ G Q Sbjct: 1 MASTLGVLDVLSKLREESERASTALTAQQETNRTLLQKCIEAETESGRTDEAKEALQLRKVQLEQGHEDAETGRREAEGRLRRLQMQQARRKQAAARMRENTTAAGASAVAISKRFRADAFDRVRQIGELRARLRDKRGELESAEEDKRELDVEISNKKATRDTVKAEVTSQLEAVALSCSKVDDIDRENKSLLARAKRVEGE--------IDEIREAQEEMQEMAVGLQRKNAILRHELRHLKRELEGGNPAQ 246
BLAST of mRNA_L-elsbetiae_contig18.5156.1 vs. uniprot
Match: A0A6H5KAN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN2_9PHAE) HSP 1 Score: 102 bits (253), Expect = 1.170e-22 Identity = 62/108 (57.41%), Postives = 82/108 (75.93%), Query Frame = 1 Query: 427 SVREKKNELDEEIKAKKTTRDKINAEVASQAEAIATACSAVEDTELENKATLAKAKQTEGEARSTHKKLVEETRQARQEMQEMAAGLQKKNAILRNELRHLKRQVGGD 750 S E+K ELD EI KK TRDK+ AEVAS+ EA+ T+CS V+D + ENK+ LA+AK+ EGE ++E R+A++EMQEMA GLQ+KNAILR+ELR+LKR++ GD Sbjct: 21 SAEEEKRELDVEIGNKKATRDKVKAEVASRLEAVTTSCSKVDDIDRENKSLLARAKRVEGE--------IDEIREAQEEMQEMAVGLQRKNAILRHELRYLKRELEGD 120 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18.5156.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig18.5156.1 >prot_L-elsbetiae_contig18.5156.1 ID=prot_L-elsbetiae_contig18.5156.1|Name=mRNA_L-elsbetiae_contig18.5156.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=285bp MASTLGILDVLGRLREESERASTALAAQEDTNRSLLHRCTEAEAESGRTVback to top mRNA from alignment at L-elsbetiae_contig18:76207..81098- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig18.5156.1 ID=mRNA_L-elsbetiae_contig18.5156.1|Name=mRNA_L-elsbetiae_contig18.5156.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4892bp|location=Sequence derived from alignment at L-elsbetiae_contig18:76207..81098- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig18:76207..81098- >mRNA_L-elsbetiae_contig18.5156.1 ID=mRNA_L-elsbetiae_contig18.5156.1|Name=mRNA_L-elsbetiae_contig18.5156.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1710bp|location=Sequence derived from alignment at L-elsbetiae_contig18:76207..81098- (Laminarionema elsbetiae ELsaHSoW15)back to top |