mRNA_L-elsbetiae_contig18.5155.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig18.5155.1 vs. uniprot
Match: D7G1G1_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G1_ECTSI) HSP 1 Score: 627 bits (1616), Expect = 7.990e-213 Identity = 343/490 (70.00%), Postives = 397/490 (81.02%), Query Frame = 1 Query: 262 AAGLGLVVACAGLG-QT-SATSIRLTECPADAPKATFRWVN-GDQLYVEGAGSCVTLPDIFNGADNAPLVYHTPAGAESATETGIWLMTKDIFMESGTTLLLHDDLGCTELRLKSSSSDWTHLRGNGAYLSLLRTKVTSWSVSKNAPDNGKSDGSNPRSYISVLSEVIHSADKCDGAADDDSGESRMDIINSEIGHLGYQASEAYGLSYKVRGFCPDGSNLEVFDRVNVRGDIRFSDIHHNWFGLYTYGHQDGLWEHNLMHDCGFYGFDPHDDSDNLRIHDNTVWNNGNHGIIASKRCNDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSGSACIALFESFDIEVSDNVCDGNEEGIRLSMGSSNNKIFDNVVTNTAGRSLWMYKGSDPVEASAEQKGRCTNNLFKDNRLESATLGFRMSETRETQVIGNTFIDTEESTFEDSDGLLWMDNEVDSGFAMDLDKTCINANSDMDQIEAAGGSIKEC 1722 AAGL L + AG QT SA SIRLTECPADAP+ATF W N GD LYVEG GSCVTLPDI+NG DN PL YHT G ES TETGIWL+TK ++M GTTLLLHDDLGCTELR+ SSS++ HL G Y+S+L TKVTSWSVS PD G DGSNPRSY+S +SE+ H +D CDGAADDD+GE+R+DIINS++G+LGYQA+E+YGL+YKVRG+C D SN EVFDRVNVRGDIRFSDIHHNWFG Y+YGHQDGLWE+N M + G+YGFDPHDDSDNLRIH+N V+ NGNHGIIASKRC XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TGSGSACIA+FESF IE+SDNVC NEEGIRLSMGSS NKIFDN V +TAGRSLW+Y GSD + ASA G CT NLF++N L+ A++G + SETR+ +IGNT + EES +DSDGLLW DNEV+ F + ++ TC+++ SD DQI A G + EC Sbjct: 12 AAGLLLFLLLAGTRVQTGSAGSIRLTECPADAPEATFSWTNDGDYLYVEGDGSCVTLPDIYNGVDNPPLTYHTVDGDESDTETGIWLLTKHLYMRPGTTLLLHDDLGCTELRIASSSTNALHLNTFGGYISILNTKVTSWSVSNKEPDAGAYDGSNPRSYMSAVSEMTHPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTGSGSACIAIFESFGIEISDNVCTDNEEGIRLSMGSSYNKIFDNQVIDTAGRSLWLYLGSDEIIASAATDGMCTGNLFQNNYLDGASIGVKFSETRDNMLIGNTMVGVEESLIDDSDGLLWSDNEVEDDFEIGIETTCLSSESDFDQISAGGSNPSEC 501
BLAST of mRNA_L-elsbetiae_contig18.5155.1 vs. uniprot
Match: D7G1G2_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G2_ECTSI) HSP 1 Score: 451 bits (1160), Expect = 9.350e-147 Identity = 264/406 (65.02%), Postives = 300/406 (73.89%), Query Frame = 1 Query: 505 IWLMTKDIFMESGTTLLLHDDLGCTELRLKSSSSDWTHLRGNGAYLSLLRTKVTSWSVSKNAPDNGKSDGSNPRSYISVLSEVIHSADKCDGAADDDSGESRMDIINSEIGHLGYQASEAYGLSYKVRGFCPDGSNLEVFDRVNVRGDIRFSDIHHNWFGLYTYGHQDGLWEHNLMHDCGFYGFDPHDDSDNLRIHDNTVWNNGNHGIIASKRCNDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSGSACIALFESFDIEVSDNVCDGNEEGIRLSMGSSNNKIFDNVVTNTAGRSLWMYKGSDPVEASAEQKGRCTNNLFKDNRLESATLGFRMSETRETQVIGNTFIDTEESTFEDSDGLLWMDNEVDSGFAMDLDKTCINANSDMDQIEAAGGSIKEC 1722 IWLMTK+IFMESGTTLLLHDDLGC +TSWSV APDNG DG N RS+IS +SE+ H +D CDGAADDD+GE+RMDIINSE+ +LGYQASE+YG+SYKVRG+C D SN EVFDRVNVRGDIRFSDIHHNWFG YGFDPHDDSDNLRIH+N V+ NGNHGIIASKRCNDV XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+GSGSACIA+FESFDIE+SDN+C NEEGIRLSMGSS NKIFDN V +TAGRS+WMY GSD VEASA G CT NLF++N LE + G M+ETR+T +IGNTFIDT+ + ++DSDGL+W DN +D F M TC+ + SD DQI G + EC Sbjct: 3 IWLMTKNIFMESGTTLLLHDDLGCD---------------------------LTSWSVGNRAPDNGAYDGLNARSFISAVSEMTHPSDTCDGAADDDAGEARMDIINSEVAYLGYQASESYGISYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQQ-------------------YGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCNDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSGSACIAIFESFDIEISDNLCTQNEEGIRLSMGSSYNKIFDNQVIDTAGRSIWMYLGSDEVEASAATDGMCTGNLFQNNYLEGSETGVAMTETRDTMLIGNTFIDTDNNEWKDSDGLVWRDNNIDGDFDMRFSDTCVTSESDFDQINGVGSNPSEC 362
BLAST of mRNA_L-elsbetiae_contig18.5155.1 vs. uniprot
Match: A0A6H5K9I9_9PHAE (MEP6 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9I9_9PHAE) HSP 1 Score: 328 bits (840), Expect = 7.130e-98 Identity = 230/497 (46.28%), Postives = 314/497 (63.18%), Query Frame = 1 Query: 259 RAAGLGLVVACAGLGQTSATSIRLTECPADAPKATFRW-VNGDQLYVEGAGSCVTLPDIFNG--------------ADNAPLVYHTPA---GAESATETGIWLMTKDIFMESGTTLLLHDDLGCTELRLKSSSSDWTHLRGNGAYLSLLRTKVTSWSVSKNAPDNGKSDGSNPRSYISVLSEVIHSADK-CDGAADDDSGESRMDIINSEIGHLGYQASEAYGLSYKVRGFCPDGSNLEVFDRVNVRGDIRFSDIHHNWFGLYTYGHQDGLWEHNLMHDCGFYGFDPHDDSDNLRIHDNTVWNNGNHGIIASKRCNDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSGSACIALFESFDIEVSDNVCDGNEEGIRLSMGSSNNKIFDNVVTNTAGRSLWMYKGSDPVEASAEQKGRCTNNLFKDNRLESATLGFRMSETRETQVIGNTFIDTEESTFEDSDGLLWMDNEVDSGFAMDLDKTCINANSDMDQI 1692 RAA +GLV A A G AT + +A KA+ R+ + D+LY+EG G C+T DI+ A+ A + TP G S ETG WL T D+++ G L LH + G T +RLKS S LR +G +LSLL T+++SW V + + S+ S PRSY++ +SEV+ S + C G A +D+GE+R DIINSE+ HLG+ +EAYG+++KVRGFC D SN ++FDRVNVRGDIRFSDIHHN+FG+YTYGHQDGLWE+NLMH+ YGFDPHDDSDNLRIH+N VW XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A+FES + + S+N C N+ G R S+G+S+NKI+DN V ++ ++MY+GSD S G + N+ +N +++AT G +M +T + GN +T + F +S ++W DN++ +G +D + +C ++SD+ Q+ Sbjct: 7 RAAAVGLVAAAAAAGL--ATLGEACDYTLEA-KASLRFNIETDRLYLEGGG-CITPSDIYLAKLTNVTEDDGNTLTAEEAAAIPITPITKDGEFSDAETGYWLFTSDVYIYDGVKLELHAESGTTGMRLKSDSKV-IELRAHGGWLSLLNTELSSWDVDE---ADYASNYSAPRSYVTAISEVLDSPPQTCVGHAKNDAGEARFDIINSEVHHLGHYGTEAYGITWKVRGFCVDLSNEDLFDRVNVRGDIRFSDIHHNYFGMYTYGHQDGLWEYNLMHENAKYGFDPHDDSDNLRIHNNIVWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIFESMEGDYSNNKCTDNKYGFRWSVGASHNKIYDNEVYDSQQYGIYMYEGSDLPYVS---DGLPSYNIIANNIIDTATEGIKMGDTVGNEFTGNVITNTADLRFRNSSEVIWKDNDIPAGVDIDSEGSCFTSDSDIVQL 492
BLAST of mRNA_L-elsbetiae_contig18.5155.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE) HSP 1 Score: 313 bits (801), Expect = 1.330e-92 Identity = 188/425 (44.24%), Postives = 238/425 (56.00%), Query Frame = 1 Query: 385 QLYVEGA-----GSCVTLPDIFNG-ADNAPLVYHTP-AGAESATETGIWLMTKDIFMESGTTLLLHDDLG---CTELRLKSSSSDWTHLRGNGAYLSLLRTKVTSWSVSKNAPDNGKSDGSNPRSYISVLSEVI-HSADKCDGAADDDSGESRMDIINSEIGHLGYQASEAYGLSYKVRGFCPDGSNLEVFDRVNVRGDIRFSDIHHNWFGLYTYGHQDGLWEHNLMHDCGFYGFDPHDDSDNLRIHDNTVWNNGNHGIIASKRCNDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT--GSGSACIALFESFDIEVSDNVCDGNEEGIRLSMGSSNNKIFDNVVTNTAGRSLWMYKGSDPVEASAEQKGRCTNNLFKDNRLESATLGFRMSETRETQVIGNTFIDTEESTFEDSDGLLWMDN 1620 +LY+E A G CVTL I+ D +PL P +G S + TG WL+T+++++E G TL +H ELRL S+S + HLR G L L TKV +W SKNAPD +SDG RSYIS +SEVI C+G A ++ GE+RMDI NSE+ +LGY +E YGL++KVRGFC D N E+FD VNV G+I SDIHHN FG+YTYGHQ G W N MHD YGFDPHDDSD L IHDN VWNNG HGIIASKRCN V +G A +A+ ESF+ +VSDN + N+ G+RLS+G N NV+T +A + + Y G+D E GR +N+F +N + + E TQ I NTF D F D+ L N Sbjct: 26 RLYIESANGRTRGGCVTLEQIWEQQVDGSPLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDG---RSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIFSKNVITGSAEFNTFSYLGADKPEVV--DSGRSQDNVFMENNIIGGVESILLKEADGTQFIDNTFKDAAAIRFVDATKTLMSGN 445
BLAST of mRNA_L-elsbetiae_contig18.5155.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 310 bits (794), Expect = 4.170e-91 Identity = 180/406 (44.33%), Postives = 241/406 (59.36%), Query Frame = 1 Query: 385 QLYVEGA-----GSCVTLPDIFNG-ADNAPLVYHTP-AGAESATETGIWLMTKDIFMESGTTLLLH--DDLG-CTELRLKSSSSDWTHLRGNGAYLSLLRTKVTSWSVSKNAPDNGKSDGSNPRSYISVLSEVIHSADK-CDGAADDDSGESRMDIINSEIGHLGYQASEAYGLSYKVRGFCPDGSNLEVFDRVNVRGDIRFSDIHHNWFGLYTYGHQDGLWEHNLMHDCGFYGFDPHDDSDNLRIHDNTVWNNGNHGIIASKRCNDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT--GSGSACIALFESFDIEVSDNVCDGNEEGIRLSMGSSNNKIFDNVVTNTAGRSLWMYKGSDPVEASAEQKGRCTNNLFKDNRLESATLGFRMSETRETQVIGNTF 1563 +LY+E A G C TL I+ A APL P +G S TETG WL+T+++++E G TL ++ D+ G ELRL S+S + +LR +G L + TKV SW S N+PD ++DG RSYIS +SE++ D+ C+G A + GE+RMDI NSEIG+LG+Q SE+YGL++KVRGFC D SN E+FD VNV G++ SDIHH FGLYTYGHQ G W N MHD YGFDPHDDSD L IHDN V+NNG HGIIASKRCN V +G A +A+ ESF+ +VS+N + N+ G+R+S+G ++N +N+++N + + + Y GSD E GR NN+F N A ++ E TQ + N F Sbjct: 59 RLYLESADGETRGGCATLGQIWESRAGKAPLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDG---RSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSD--EPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVF 459
BLAST of mRNA_L-elsbetiae_contig18.5155.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE) HSP 1 Score: 303 bits (776), Expect = 1.070e-88 Identity = 190/426 (44.60%), Postives = 253/426 (59.39%), Query Frame = 1 Query: 382 DQLYVEGA-----GSCVTLPDIF-NGADNAPL-VYHTPAGAESATETGIWLMTKDIFMESGTTLLLHDDLG---CTELRLKSSSSDWTHLRGNGAYLSLLRTKVTSWSVSKNAPDNGKSDGSNPRSYISVLSEVI-HSADKCDGAADDDSGESRMDIINSEIGHLGYQASEAYGLSYKVRGFCPDGSNLEVFDRVNVRGDIRFSDIHHNWFGLYTYGHQDGLWEHNLMHDCGFYGFDPHDDSDNLRIHDNTVWNNGNHGIIASKRCNDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSG--SACIALFESFDIEVSDNVCDGNEEGIRLSMGSSNNKIFDNVVTNTAGRSLWMYKGSDPVEASAEQKGRCTNNLFKDNRLESATLGFRMSETRETQVIGNTFIDTEESTFEDSDGLLWMDN 1620 ++LY+E A G CVTL I+ + APL + +G S + TG WL+T+++F+E G TL +H ELRL S+S + +LR +G L L TKV +W S N PD + DG RSY+S +SEVI + C+G A ++ GE+RMDI +SE+G+LGY SE+YGL++KVRGFC D SN ++F+ VNV G+I SDIHHN FG+YTYGHQ G W N MHD YGFDPHDDSD L IHDN V++NG HGIIASKRCN V XXXXXXXXXX A +A+ ESF+ +VSDN+ + N+ GIR S+GS N F+NV++ + S + Y GSD + GR +N+F++N + ++ + TQ I NTF D F D+ L N Sbjct: 51 ERLYLESADSKTRGGCVTLEQIWEHQRGEAPLYAVDSKSGDISDSATGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDG---RSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNNVISGSTRYSTYSYLGSDAPDVV--DSGRSQDNVFQENNIIGGVESIKLLDADGTQFIDNTFEDATTIRFNDAKKTLMSGN 471
BLAST of mRNA_L-elsbetiae_contig18.5155.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 300 bits (769), Expect = 1.370e-87 Identity = 177/407 (43.49%), Postives = 236/407 (57.99%), Query Frame = 1 Query: 385 QLYVEGA------GSCVTLPDIFNG-ADNAPLVYHTP-AGAESATETGIWLMTKDIFMESGTTLLLH-DDLG--CTELRLKSSSSDWTHLRGNGAYLSLLRTKVTSWSVSKNAPDNGKSDGSNPRSYISVLSEVIHSADK-CDGAADDDSGESRMDIINSEIGHLGYQASEAYGLSYKVRGFCPDGSNLEVFDRVNVRGDIRFSDIHHNWFGLYTYGHQDGLWEHNLMHDCGFYGFDPHDDSDNLRIHDNTVWNNGNHGIIASKRCNDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT--GSGSACIALFESFDIEVSDNVCDGNEEGIRLSMGSSNNKIFDNVVTNTAGRSLWMYKGSDPVEASAEQKGRCTNNLFKDNRLESATLGFRMSETRETQVIGNTF 1563 +LY+E A G CVTL I+ A PL P +G S + TG WL+T+++++E G TL ++ + G ELRL S++ + +LR +G L + TKV SW S N+PD ++DG RSYIS +SE+I D+ C+G A + GE+RMDI +SEIG+LGY SE+YGL++KVRGFC D SN EVFD VNV G++ SDIHH FGLYTYGHQ G W N MHD YGFDPHDDSD L IHDN V+NNG HGIIASKRCN V +G A +A+ ESF+ +VS+N + N+ G+R S+G ++N +N ++N A + + Y G+D E GR NN+F N A ++ E TQ + N F Sbjct: 54 RLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDG---RSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTD--EPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVF 455
BLAST of mRNA_L-elsbetiae_contig18.5155.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA) HSP 1 Score: 294 bits (752), Expect = 2.790e-85 Identity = 193/446 (43.27%), Postives = 258/446 (57.85%), Query Frame = 1 Query: 385 QLYVEGA-----GSCVTLPDIFNGADN-APLVYHTPAGAE-SATETGIWLMTKDIFMESGTTLLLHDDLG---CTELRLKSSSSDWTHLRGNGAYLSLLRTKVTSWSVSKNAPDNGKSDGSNPRSYISVLSEVI-HSADKCDGAADDDSGESRMDIINSEIGHLGYQASEAYGLSYKVRGFCPDGSNLEVFDRVNVRGDIRFSDIHHNWFGLYTYGHQDGLWEHNLMHDCGFYGFDPHDDSDNLRIHDNTVWNNGNHGIIASKRCNDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT--GSGSACIALFESFDIEVSDNVCDGNEEGIRLSMGSSNNKIFDNVVTNTAGRSLWMYKGSDPVEASAEQKGRCTNNLFKDNRLESATLGFRMSETRETQVIGNTFIDTEESTFEDSDGLLWMDNEVDSGFAMDL-DKTCINANSD 1680 +LY+E A G CVTL DI+ D APL P+ + S++ TG WL+T+ +++E G TL +H ELRL S+S D+ +LR +G L + TKV +W SKN ++D S RSYIS +SEVI S KCDG A + GE+RMDI +SE+ +LGY SE+YGL++KVRG C D SNLEVFD VNV G+I SDIHHN+FG+YTYGH+ G W N MH YGFDPHDDSD L IHDN V+NNGNHGIIASKRCN XXXXXXXXX +G A +AL E+F+ +VS+N + N+ GIR+S+G ++N N +T ++ +++ Y+GSD GR + +++ T+ I NTF + FED G L N G ++ + D +C + SD Sbjct: 52 RLYLESADGNTRGGCVTLEDIWRDLDGGAPLYAVKPSSGDVSSSITGTWLLTESLYVEDGITLQVHGKSAGGKADELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKV---RTDDSKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGAAKSVGIFLHRSSDDAIVKDNYVHDNGDAGMALMETFNADVSNNKFEDNKYGIRMSVGCADNVFSKNDITGSSKYNVYTYQGSDAPWVV--DSGRSQDXXXXXXXXSGGQETVKLTMADGTEFIDNTFKSAKTIRFEDCQGTLMSGNSGLGGASLKVTDGSCFDKKSD 492
BLAST of mRNA_L-elsbetiae_contig18.5155.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 287 bits (735), Expect = 1.630e-83 Identity = 173/423 (40.90%), Postives = 234/423 (55.32%), Query Frame = 1 Query: 406 GSCVTLPDIF-------NGADNAPLVY---HTPAGAESATETGIWLMTKDIFMESGTTLLLHDD-LG--CTELRLKSSS-SDWTHLRGNGAYLSLLRTKVTSWSVSKNAPDNGKSDGSNPRSYISVLSEVIHSADKCDGAADDDSGESRMDIINSEIGHLGYQASEAYGLSYKVRGFCPDGSNLEVFDRVNVRGDIRFSDIHHNWFGLYTYGHQDGLWEHNLMHDCGFYGFDPHDDSDNLRIHDNTVWNNGNHGIIASKRCNDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT--GSGSACIALFESFDIEVSDNVCDGNEEGIRLSMGSSNNKIFDNVVTNTAGRSLWMYKGSDPVEASAEQKGRCTNNLFKDNRLESATLGFRMSETRETQVIGNTFIDTEESTFEDSDGLLWMDNEV 1626 G C TL D++ NG P+ + + T TG WL+T D+F+ G TL +G C ELR++S+S SD+ +RG+G L T VTSW V P DG RS+I +SEV+ D C A ++ GE RMDII+SE+G+LGY ASEAYG+++KVRGFC D SN +VFD VNV GD++ SDIHH ++G+Y++GHQ G+W +NLMHD YGFDPHDDSD L I N V+NN NHGIIASKRCN+V T G A IA+ E+ ++ DN DG E GIR+ +GSSNNK+ DNV N ++ Y GSD GR +N F +N +++ G ++ E+ + N F T E F ++ ++W N + Sbjct: 9 GGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDG---RSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGG---GRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNSI 422
BLAST of mRNA_L-elsbetiae_contig18.5155.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE) HSP 1 Score: 285 bits (729), Expect = 5.510e-82 Identity = 195/497 (39.24%), Postives = 276/497 (55.53%), Query Frame = 1 Query: 253 LLRAAGLGLVVACAGLGQTSATS----IRLTECPADAPKATFRW-VNGDQLYVEGA-----GSCVTLPDIFNGAD-NAPLVYHTPAGAE-SATETGIWLMTKDIFMESGTTLLLHDDLG---CTELRLKSSSSDWTHLRGNGAYLSLLRTKVTSWSVSKNAPDNGKSDGSNPRSYISVLSEVI-HSADKCDGAADDDSGESRMDIINSEIGHLGYQASEAYGLSYKVRGFCPDGSNLEVFDRVNVRGDIRFSDIHHNWFGLYTYGHQDGLWEHNLMHDCGFYGFDPHDDSDNLRIHDNTVWNNGNHGIIASKRCNDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTG--SGSACIALFESFDIEVSDNVCDGNEEGIRLSMGSSNNKIFDNVVTNTAGRSLWMYKGSDPVEASAEQKGRCTNNLFKDNRLESATLGFRMSETRETQVIGNTFIDTEESTFEDSDGLLWMDNEVDSGFAMDLDK-TCINANSDMD 1686 +LR A + ++A G + +S I C + K + R+ + +LY+E A G CVTL +I+ D +APL P+ + S++ TG WL+T+D+++E G TL +H ELRL S+S D+ +LR +G L + TKV +W SKN ++DGS RSYIS +SE+I S +KCDG A GE+RMDI +SE+ +LGYQ SE+YGL++KVRGFC DGSN EVFD VNV G+I SDIHHN FG+YTYGH+ G W N MH YGFDPHDDSD L IHDN V XXXXXXXXX +G A +AL ESF+ +VS+N + N+ G+RLS+G ++N NV+++++ +++ Y+GSD + GR +N+F DN + +++ T+ I NTF + + FED++ L N + + K C + SD D Sbjct: 7 MLRTAAIVSLLAARGADAANTSSKNKAISKPSCKSST-KVSIRYSASSKRLYLESADGKTRGGCVTLEEIWKDLDGSAPLYAVKPSSGDVSSSATGTWLLTEDLYVEDGITLQVHGTSAGGNANELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKV---RTDGSKARSYISAVSEIITDSKEKCDGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNKVXXXXXXXXXXXXXXXXXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNXXXXNGDAGMALMESFNADVSNNKFEDNKYGVRLSVGCADNVFSKNVISDSSKYNVYTYEGSD--DPWVVDSGRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKRAKTARFEDAETTLMSGNTGLGSATLKVSKGACFDKKSDSD 497 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18.5155.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig18.5155.1 >prot_L-elsbetiae_contig18.5155.1 ID=prot_L-elsbetiae_contig18.5155.1|Name=mRNA_L-elsbetiae_contig18.5155.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=512bp MARPGRPQGCLLRAAGLGLVVACAGLGQTSATSIRLTECPADAPKATFRWback to top mRNA from alignment at L-elsbetiae_contig18:62665..72477+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig18.5155.1 ID=mRNA_L-elsbetiae_contig18.5155.1|Name=mRNA_L-elsbetiae_contig18.5155.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9813bp|location=Sequence derived from alignment at L-elsbetiae_contig18:62665..72477+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig18:62665..72477+ >mRNA_L-elsbetiae_contig18.5155.1 ID=mRNA_L-elsbetiae_contig18.5155.1|Name=mRNA_L-elsbetiae_contig18.5155.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3072bp|location=Sequence derived from alignment at L-elsbetiae_contig18:62665..72477+ (Laminarionema elsbetiae ELsaHSoW15)back to top |