mRNA_L-elsbetiae_contig18.5150.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig18.5150.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE) HSP 1 Score: 561 bits (1447), Expect = 2.920e-193 Identity = 275/426 (64.55%), Postives = 328/426 (77.00%), Query Frame = 1 Query: 40 VTNKWLLTAELYVTNGAIFYCKGTEVGGDCDELRIQSTGPFDYYELRGHGGSLYFESTIVTSWDTPNKVPQEVHEDGRSFVNCVSEKLTGETCVGAAKDDRGECRMDMINSEMAYLGFFESESYGITWKVR---------GFCVDLSNHDVFTTTNVYGDIKGCDIHHNYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAHNEVYNNINHGIIASKRCNNVTIHDNKVSDGGAQAVGIFLHRSSDNAKVYNNEIWNMQDSGIAFMESMNGEIYDNDISDCRIGIRLSMGSAGNVVHDNLFDGFSEIGFNTYRGTRGLNDPTRGIFNFDRDGFPHDNTFKDNKMLNTEQGTKFKDSQDLVVTGNEFTGTAEIEFFDVQNTHWRRNTVPSTACLDLVTSNQGNSIEPSTFTSGSRGLPAE 1290 VT KWLL AELYVTNGAIFYC G+E GGDCDELRIQSTGP D+YE+RGHGGS+YF T+VTSWDTPNK PQE +E GRSF+NCVSEKLTGETC G AK+D GECRMD+INSEM Y+GFF+SESYG+TWKVR GFC DLSN DVF TTNVYGDIK DIHH YYGHYSYGHQGGVWTNN+MHDN QY +A+N+VYNN NHGIIASKRCNNV I+DN+VSDGG AVGIFLHRSSDNA+VY N+IWNM D+GIA +ES N +I+DN+I + GIR+S+GS GN V+DN F+ S+ G TY G+ ++P +G P+ NTF +NK+ N+ G KFK+S ++VVT NEFTGT E+EF+D Q T W N++PS C+D +TS+ GNS+ PSTF+S S G+P+E Sbjct: 60 VTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGS---DEPDVS------NGRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGNSLPSGVCIDNITSDDGNSVPPSTFSSSS-GVPSE 463
BLAST of mRNA_L-elsbetiae_contig18.5150.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI) HSP 1 Score: 540 bits (1392), Expect = 4.610e-184 Identity = 259/419 (61.81%), Postives = 321/419 (76.61%), Query Frame = 1 Query: 40 VTNKWLLTAELYVTNGAIFYCKGTEVGGDCDELRIQSTGPFDYYELRGHGGSLYFESTIVTSWDTPNKVPQEVHEDGRSFVNCVSEKLTGETCVGAAKDDRGECRMDMINSEMAYLGFFESESYGITWKVRGFCVDLSNHDVFTTTNVYGDIKGCDIHHNYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAHNEVYNNINHGIIASKRCNNVTIHDNKVSDGGAQAVGIFLHRSSDNAKVYNNEIWNMQDSGIAFMESMNGEIYDNDISDCRIGIRLSMGSAGNVVHDNLFDGFSEIGFNTYRGTRGLNDPTRGIFNFDRDGFPHDNTFKDNKMLNTEQGTKFKDSQDLVVTGNEFTGTAEIEFFDVQNTHWRRNTVPSTACLDLVTSNQGNSIEPSTFTSGSRGLPA-EC 1293 ++NKWLLTAEL++T GA+FYC+G+ +GGDCDELRIQSTGP D++E+R HGGS+YFESTIVTSWDTPNK PQ + GRSF+NCVSEKLTGE CVG A+++ GECRMD+INSE+ YLG+F+SESYG+TWKVRGFC DLSN DVF TTNVYG++ G DIHHNYYG YSYGHQGGVW NN+MHDN QYGFDPHDDSDYLT IIASKRCNNV I++N+V DGG A GIFLHRSSD A V++N + +MQD+G+A +ESMN +IY+N S + GIRLS+GS+ N VH+NLF+ S G TY+G+ ++PT G+ DG P DN F++N++LN +G K K+ D V+T N FTGT+E+EFFD QNT W+ NT+P C+ + S+ G IE STF + GLP EC Sbjct: 124 LSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLT------------SIIASKRCNNVQIYNNEVYDGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGS---DEPTDGV----SDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNTLPQGVCIKNIHSDDGIDIELSTFDRRTAGLPTLEC 523
BLAST of mRNA_L-elsbetiae_contig18.5150.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 506 bits (1304), Expect = 6.880e-166 Identity = 244/389 (62.72%), Postives = 289/389 (74.29%), Query Frame = 1 Query: 28 IGGGVTNKWLLTAELYVTNGAIFYCKGTEVGGDCDELRIQSTGPFDYYELRGHGGSLYFESTIVTSWDTPNKVPQEVHEDGRSFVNCVSEKLTGETCVGAAKDDRGECRMDMINSEMAYLGFFESESYGITWKVRGFCVDLSNHDVFTTTNVYGDIKGCDIHHNYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAHNEVYNNINHGIIASKRCNNVTIHDNKVSDGGAQAVGIFLHRSSDNAKVYNNEIWNMQDSGIAFMESMNGEIYDNDISDCRIGIRLSMGSAGNVVHDNLFDGFSEIGFNTYRGTRGLNDPTRGIFNFDRDGFPHDNTFKDNKMLNTEQGTKFKDSQDLVVTGNEFTGTAEIEFFDVQNTHWRRNTV 1194 I G+TN WLL AELY+T G +FYCKGT GGDC++LRIQSTG D++E+RGHGGSLYFE TIVTSWDTPNK PQE +E+GRSF+NCVSEKLTG+ C G AK++ GECRMD+INSE+AYLG+F+SESYG+TWKVRGFC DLSN +VF TNVYGD+ G DIHH YYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIA+NEVYNN+NHGIIASKRCNNV I +N+V DGGA A GIFLHRSSD A V++N I NMQD+GIA +ES + +IY N I+ + GIR+S+GS N V+ N F S+ G TY G+ ++P DG P N N + + G K K+ D N F EF + NT W N + Sbjct: 483 IPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGS---DEPDVS------DGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDI 862
BLAST of mRNA_L-elsbetiae_contig18.5150.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 485 bits (1249), Expect = 1.320e-163 Identity = 244/418 (58.37%), Postives = 301/418 (72.01%), Query Frame = 1 Query: 43 TNKWLLTAELYVTNGAIFYCKGTEVGGDCDELRIQSTGPFDYYELRGHGGSLYFESTIVTSWDTPNKVPQEVHEDGRSFVNCVSEKLTGE-TCVGAAKDDRGECRMDMINSEMAYLGFFESESYGITWKVRGFCVDLSNHDVFTTTNVYGDIKGCDIHHNYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAHNEVYNNINHGIIASKRCNNVTIHDNKVSDGGAQAVGIFLHRSSDNAKVYNNEIWNMQDSGIAFMESMNGEIYDNDISDCRIGIRLSMGSAGNVVHDNLFDGFSEIGFNTYRGTRGLNDPTRGIFNFDRDGFPHDNTFKDNKMLNTEQGTKFKDSQDLVVTGNEFTGTAEIEFFDVQNTHWRRNTVPSTACLDLVTSNQGNSIEPSTFTSGSRGLPAEC 1293 T KWLLTA+L+VT GA YC+G VGG+C ELRI+ST D++E+RGHGG+LYFE TIVTSWD + PQE ++DGRSF+ CVSE LTGE TC A ++ GECRMD+I+SEM YLG+ SE+YGITWKVRGFC DLSN DVF NVYGD+KG DIHH YYG YS+GHQGGVWTNN MHDN QYGFDPHDDSDYL IA N+VYNN+NHGIIASKRCNNV I+DN+V DGGA A GIFLHRS D+++VY N I NM D+GIA +E+ +I+DN + GIR+ +GS+ N VHDN+F +G TY G+ ++P G G P DN F +N + TE G K K+S ++ +T N F+GT EIEF + + W N++P+ CL+ + +N STFT GS GLP EC Sbjct: 50 TGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGS---DEPWVG------GGRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNSIPTNTCLEDIDNN-------STFT-GSSGLPLEC 447
BLAST of mRNA_L-elsbetiae_contig18.5150.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI) HSP 1 Score: 474 bits (1220), Expect = 1.990e-160 Identity = 239/417 (57.31%), Postives = 280/417 (67.15%), Query Frame = 1 Query: 40 VTNKWLLTAELYVTNGAIFYCKGTEVGGDCDELRIQSTGPFDYYELRGHGGSLYFESTIVTSWDTPNKVPQEVHEDGRSFVNCVSEKLTGETCVGAAKDDRGECRMDMINSEMAYLGFFESESYGITWKVRGFCVDLSNHDVFTTTNVYGDIKGCDIHHNYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAHNEVYNNINHGIIASKRCNNVTIHDNKVSDGGAQAVGIFLHRSSDNAKVYNNEIWNMQDSGIAFMESMNGEIYDNDISDCRIGIRLSMGSAGNVVHDNLFDGFSEIGFNTYRGTRGLNDPTRGIFNFDRDGFPHDNTFKDNKMLNTEQGTKFKDSQDLVVTGNEFTGTAEIEFFDVQNTHWRRNTVPSTACLDLVTSNQGNSIEPSTFTSGSRGLPAE 1290 VT KWLL +ELYVT+GAIFYC G+E GGDCDELRIQSTGP D+YE+RGHGGS+YF T+VTSWDTPNK PQE +E GRSF+NCVSEKLTGETC G AK+D GECRMD+INSEM Y+GFF++ESYG+TWKVRGFC DLSN DVF TTNVYGDIK +IHH YYG YSYGHQGGVWTNN+MHDN QYGFDPHDDSDYLTIA ASKRCNNV I++N+VSDGG +AVGIFLHRSSDNA+VY G + N G P+ NTF +NK+ NT G K K+S ++V++ N+FTGT E+EFFD Q T W N++PS C+D VTS+ GNS+ PSTF+S S G+P+E Sbjct: 15 VTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDNAEVY---------GGXXXXXXXDAPDVSN-------------------------------------------------------GRPNGNTFNNNKITNTAGGVKIKNSDNIVISNNDFTGTEELEFFDAQATTWSDNSLPSGVCIDNVTSDDGNSVPPSTFSSSS-GVPSE 366
BLAST of mRNA_L-elsbetiae_contig18.5150.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE) HSP 1 Score: 447 bits (1151), Expect = 3.400e-150 Identity = 212/316 (67.09%), Postives = 248/316 (78.48%), Query Frame = 1 Query: 28 IGGGVTNKWLLTAELYVTNGAIFYCKGTEVGGDCDELRIQSTGPFDYYELRGHGGSLYFESTIVTSWDTPNKVPQEVHEDGRSFVNCVSEKLTGETCVGAAKDDRGECRMDMINSEMAYLGFFESESYGITWK--------VRGFCVDLSNHDVFTTTNVYGDIKGCDIHHNYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAHNEVYNNINHGIIASKRCNNVTIHDNKVSDGGAQAVGIFLHRSSDNAKVYNNEIWNMQDSGIAFMESMNGEIYDNDISDCRIGIRLSMGSAGNVVHDNLFDGFSE 951 I G+TN WLL AELY+T G +FYCKGT GGDC++LRIQSTG D++E+RGHGGSLYFE TIVTSWDTPNK PQE +E GRSF+NCVSEKLTG+ C G AK++ GECRMD+INSE+AYLG+F+SESYG+TWK VRGFC DLSN +VF TNVYGD+ G DIHH YYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLT IIASKRCNNV I +N+V DGGA AVGIFLHRSSD+A V++N I NMQD+GIA +E+ + +IY N I+ + GIR+S+GS NVV+ N F S+ Sbjct: 32 IPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTR------------IIASKRCNNVKIFENEVRDGGAAAVGIFLHRSSDDAAVFDNTITNMQDAGIALLEAFDAQIYGNTINGAKYGIRMSLGSGNNVVYQNSFTDISQ 335
BLAST of mRNA_L-elsbetiae_contig18.5150.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI) HSP 1 Score: 380 bits (977), Expect = 3.130e-120 Identity = 208/412 (50.49%), Postives = 265/412 (64.32%), Query Frame = 1 Query: 13 ENVNPIGGGVTNKWLLTAELYVTNGAIFYCKGTEVGGDCDELRIQSTGPFDYYELRGHGGSLYFESTIVTSWDTPNKVPQEVHEDGRSFVNCVSEKLTGET--CVGAAKDDRGECRMDMINSEMAYLGFFESESYGITWKVRGFC-VDLS-----NHDVFTTTNVYGDIKGCDIHHNYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAHNEVYNNINHGIIASKRCNNVTIHDNKVSDGGAQAVGIFLHRSSDNAKVYNNEIWNMQDSGIAFMESMNGEIYDNDISDCRIGIRLSMGSAGNVVHDNLFDGFSEIGFNTYRGTRGLNDPTRGIFNFDRDGFPHDNTFKDNKMLNTEQ---GTKFKDSQDLVVTGNEFTGTAEIEFFDVQNTHWRRNTVPSTACLD 1215 EN + +GG T WLL L V +G+ GT GD D LR+ ST D+ E+RG+GG+L+F+ST VTSWDT N +E DGRSF+NCV++ C G + + GECRMD+I+S M +G+F++ESYG+TWKVRG C +D NH++F NVYGDI +I+ YYGHYSYGHQGGVW +N M DN QYGFDPHDDSD LTI++N VY N NHGIIASKRCNNV I +N+V DGG AVGIFLHRSSD A+V++N ++NMQD+G+A MES + IYDN ++CR GIRLS+GS N++ +NLF G ++ G TY G+ +DP N G P DN F D + T+ G K+ V N FTG + EF D +T W NT CLD Sbjct: 219 ENNDVVGGTPTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLSTSD-DFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGS---DDPDVPNSN----GRPSDNVF-DGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDNT--GGGCLD 619
BLAST of mRNA_L-elsbetiae_contig18.5150.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE) HSP 1 Score: 386 bits (991), Expect = 7.380e-120 Identity = 205/404 (50.74%), Postives = 260/404 (64.36%), Query Frame = 1 Query: 16 NVNPIGGGVTNKWLLTAELYVTNGAIFYCKGTEVGGDCDELRIQSTGPFDYYELRGHGGSLYFESTIVTSWDTPNKVPQEVHEDGRSFVNCVSEKLTG--ETCVGAAKDDRGECRMDMINSEMAYLGFFESESYGITWKVRGFCVDLSNHDVFTTTNVYGDIKGCDIHHNYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAHNEVYNNINHGIIASKRCNNVTIHDNKVSDGGAQAVGIFLHRSSDNAKVYNNEIWNMQDSGIAFMESMNGEIYDNDISDCRIGIRLSMGSAGNVVHDNLFDGFSEIGFNTYRGTRGLNDPTRGIFNFDRDGFPHDNTFKDNKMLNTEQGTKFKDSQDLVVTGNEF---TGTAEIEFFDVQNTHWRRNTVPSTACL 1212 N N +GG T WLL +++V G++ G + GGD LRIQSTG DYYE+RGHGGSL F T VTSWDT K ++ RSF+ CVSE+L +TC G A + GECRMD+I SEM +G+ +ESYGI+WKVRG+C + N +VF T V GDI DI+ YYGHYS+GH GG+WT NKMHDN QYGFDPHDDSD L IA+N V+ N NHGIIASKRCNNV IH N V DGG AVGIFLHRSSD+ +V+ N +++M+D+G+A MESM I+DN ++ + GIRLS+G+A N+V +N F + G TY+G ND + D DG DNTF N + E G K + ++ +V T N F + E F D ++ W N VP CL Sbjct: 432 NDNVVGGSPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQG----NDKPEA--SKDWDGLLVDNTFHANTV---EGGVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNNRVPDDICL 826
BLAST of mRNA_L-elsbetiae_contig18.5150.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE) HSP 1 Score: 335 bits (860), Expect = 7.310e-105 Identity = 184/403 (45.66%), Postives = 239/403 (59.31%), Query Frame = 1 Query: 1 GSVVENVNPIGGGV----TNKWLLTAELYVTNGAIFYCKGTEVGGDCDELRIQSTGPFDYYELRGHGGSLYFESTIVTSWDTPNKVPQEVHEDGRSFVNCVSEKLTGE--TCVGAAKDDRGECRMDMINSEMAYLGFFESESYGITWKVRGFCVDLSNHDVFTTTNVYGDIKGCDIHHNYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAHNEVYNNINHGIIASKRCNNVTIHDNKVSDGGAQAVGIFLHRSSDNAKVYNNEIWNMQDSGIAFMESMNGEIYDNDISDCRIGIRLSMGSAGNVVHDNLFDGFSEIGFNTYRGTRGLNDPTRGIFNFDRDGFPHDNTFKDNKMLNTEQGTKFKDSQDLVVTGNEFTGTAEIEFFDVQNTHWRRNT 1191 GS + V+P G V T WLLT E+YV +G G GGD DELR+ ST + LR +GGSL F ST V +WDT P + DGRS+++ VSE +T + TC G AK++ GE RMD+ NSEMAYLG+ +E+YG+TWKVRGFCVD N ++F NVYG+I DIHHN +G Y+YGHQ G W NKMHDN YGFDPHDDSD+LTI NEV+NN HGIIASKRCN V+I N+V G + + GIFLHRSSDN V N + + D+G+A +ES N ++ DN + + G+RLS+G N+ N+ G +E +Y G D + + G DN F +N ++ + K++ N F A I F D T NT Sbjct: 53 GSPLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSD-TFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDGRSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIFSKNVITGSAEFNTFSYLGA----DKPEVVDS----GRSQDNVFMENNIIGGVESILLKEADGTQFIDNTFKDAAAIRFVDATKTLMSGNT 446
BLAST of mRNA_L-elsbetiae_contig18.5150.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 333 bits (855), Expect = 1.300e-103 Identity = 189/401 (47.13%), Postives = 241/401 (60.10%), Query Frame = 1 Query: 19 VNPIGGGV----TNKWLLTAELYVTNGAIFYCKGTEVGGDCDELRIQSTGPFDYYELRGHGGSLYFESTIVTSWDTPNKVPQEVHEDGRSFVNCVSEKLTGE--TCVGAAKDDRGECRMDMINSEMAYLGFFESESYGITWKVRGFCVDLSNHDVFTTTNVYGDIKGCDIHHNYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAHNEVYNNINHGIIASKRCNNVTIHDNKVSDGGAQAVGIFLHRSSDNAKVYNNEIWNMQDSGIAFMESMNGEIYDNDISDCRIGIRLSMGSAGNVVHDNLFDGFSEIGFNTYRGTRGLNDPTRGIFNFDRDGFPHDNTFKDNKMLNTEQGTKFKDSQDLVVTGNEF-TGTAE---IEFFDVQNTHWRRNT 1191 V+P G V T WLLT ELYV +G GT+ GGD DELR+ ST Y LR HGGSL F T V SWDT P E DGRS+++ VSE +T E TC G AK+ GE RMD+ NSE+ YLGF +SESYG+TWKVRGFC D SN ++F NVYG++ DIHH +G Y+YGHQ G W NKMHDN YGFDPHDDSD+LTI NEVYNN HGIIASKRCN V+I N+V G + GIFLHRSSD+A V N + + D+G+A +ES N ++ +N + + G+R+S+G A NV +N+ S+ TY G+ ++P + G +N F N E+ K K++ N F G A+ + F D N+ + NT Sbjct: 92 VDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSE-TYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGS---DEP-----DVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNT 483 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18.5150.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig18.5150.1 >prot_L-elsbetiae_contig18.5150.1 ID=prot_L-elsbetiae_contig18.5150.1|Name=mRNA_L-elsbetiae_contig18.5150.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=314bp MDMINSEMAYLGFFESESYGITWKVRGFCVDLSNHDVFTTTNVYGDIKGCback to top mRNA from alignment at L-elsbetiae_contig18:8629..13915- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig18.5150.1 ID=mRNA_L-elsbetiae_contig18.5150.1|Name=mRNA_L-elsbetiae_contig18.5150.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5287bp|location=Sequence derived from alignment at L-elsbetiae_contig18:8629..13915- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig18:8629..13915- >mRNA_L-elsbetiae_contig18.5150.1 ID=mRNA_L-elsbetiae_contig18.5150.1|Name=mRNA_L-elsbetiae_contig18.5150.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1884bp|location=Sequence derived from alignment at L-elsbetiae_contig18:8629..13915- (Laminarionema elsbetiae ELsaHSoW15)back to top |