mRNA_L-elsbetiae_contig1790.5111.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1790.5111.1
Unique NamemRNA_L-elsbetiae_contig1790.5111.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1790.5111.1 vs. uniprot
Match: D8LG79_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG79_ECTSI)

HSP 1 Score: 341 bits (875), Expect = 1.840e-113
Identity = 213/331 (64.35%), Postives = 239/331 (72.21%), Query Frame = 1 
Query:    1 FSAENDDSN-IESVATSPRRGRNGLAAVQASGPLRIPSNRSQNTSDAPTTSRAYGGGLATVRASERFLQQSKNHNSSSRDTTRVRSFSESRGGLGADNAGKLMEEGISHVQ-----GSKTLLGGKVEVGEGSSNHRNHDVGFLAALRTMIFGARDPESDLSTETLEELHMVTGFTSKELRLTRSHFLALVKDPSFITREEFLEIPSVANNPLRERLLVCFGFDSMANLKFREXXXXXXXXXXXTAQRDQKLRMAFTLVDIDGDGQVSKNDLVRYLELVTAAPEGVKIDLNAVAARIIEEGVSTPGVKSLSLADYIKIMGAADFADKLTIPL 975
            FS EN+D+N + +   S +  ++GLA+ QASG      +  ++  DAP+TSR + GG                      DT  +          G D+A KL EEGI  +      GSK   G       GS+ HR+ D GFLA LRT +FGAR+P SDLS ETLEELHMVTGFT KELRLTRSHFLALV + SFITREEFLEIPSVANNPLRERLLVCFGFDSM NLKF+EXXXXXXXXXXX+AQRDQKLRMAFTLVDIDGDGQVSKNDLVRYLEL+TAAPEGVKIDLNAVAAR+IEEG S PGV SLSL D+IKIMGAADFADKLTIPL
Sbjct:   30 FSGENNDNNSMNNREGSAKPTKSGLASFQASGRFLASYDHHRDARDAPSTSRRHRGG----------------------DTYGINRS-------GVDDARKL-EEGIRGLSSQPKDGSKRPSGENETGNRGSNGHRHKDTGFLATLRTTLFGAREPVSDLSIETLEELHMVTGFTYKELRLTRSHFLALVNEASFITREEFLEIPSVANNPLRERLLVCFGFDSMDNLKFKEXXXXXXXXXXXSAQRDQKLRMAFTLVDIDGDGQVSKNDLVRYLELITAAPEGVKIDLNAVAARVIEEGASAPGVTSLSLGDFIKIMGAADFADKLTIPL 330
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BLAST of mRNA_L-elsbetiae_contig1790.5111.1 vs. uniprot
Match: A0A835YVJ1_9STRA (EF-hand domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVJ1_9STRA)

HSP 1 Score: 132 bits (331), Expect = 4.490e-34
Identity = 72/155 (46.45%), Postives = 96/155 (61.94%), Query Frame = 1 
Query:  511 KELRLTRSHFLALVKDPSFITREEFLEIPSVANNPLRERLLVCFGFDSMANLKFREXXXXXXXXXXXTAQRDQKLRMAFTLVDIDGDGQVSKNDLVRYLELVTAAPEGVKIDLNAVAARIIEEGVSTPGVKSLSLADYIKIMGAADFADKLTIPL 975
            +EL   R  FL  V D  +ITR+EF  IPSV  +PLR+RL+VCFGF  +  L FR+           +A  DQKLR+AF L D D DG++S  D+  YLE +   PEG +IDL AVAARII+E  + P  K+++ AD+ ++M  AD   +L IPL
Sbjct:    1 RELHSLRRRFLQHVSDRDYITRDEFAAIPSVNISPLRDRLMVCFGFHQLDWLPFRDFAEAIAPFNNPSAPADQKLRVAFQLQDFDDDGELSATDVRCYLERIITIPEGAEIDLEAVAARIIQEACTNPAQKAITQADFSRVMQGADL--RLYIPL 153
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BLAST of mRNA_L-elsbetiae_contig1790.5111.1 vs. uniprot
Match: A0A482SSL2_9ARCH (EF-hand domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SSL2_9ARCH)

HSP 1 Score: 110 bits (276), Expect = 1.300e-25
Identity = 58/175 (33.14%), Postives = 100/175 (57.14%), Query Frame = 1 
Query:  451 ESDLSTETLEELHMVTGFTSKELRLTRSHFLALVKDPSFITREEFLEIPSVANNPLRERLLVCFGFDS-MANLKFREXXXXXXXXXXXTAQRDQKLRMAFTLVDIDGDGQVSKNDLVRYLELVTAAPEGVKIDLNAVAARIIEEGVSTPGVKSLSLADYIKIMGAADFADKLTIP 972
            ESD+  E +EE  M++GF  +E+   +  FL   ++   + +E FL +  + NNPL+ER+ +CFG+D  +  L F +             QR+QKL+ AF + D D DG ++KNDLV+YLE +T+     K  ++ VA ++++E  S    ++++  D+ +++   DF  KL +P
Sbjct:   13 ESDIPDEKMEEFRMLSGFKPREIHRLKKSFLKYTENRDLLAKESFLSLEPLVNNPLKERIALCFGYDEEVVELDF-QAFLCGLALFNSPGQREQKLKTAFRIQDFDNDGVINKNDLVKYLEALTSGTLDEK-QISEVADQVLKETASDALQENITYNDFQRVVAPQDFQAKLRLP 185
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BLAST of mRNA_L-elsbetiae_contig1790.5111.1 vs. uniprot
Match: A0A485KSR6_9STRA (Aste57867_10739 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KSR6_9STRA)

HSP 1 Score: 100 bits (250), Expect = 7.960e-22
Identity = 65/172 (37.79%), Postives = 94/172 (54.65%), Query Frame = 1 
Query:  457 DLSTETLEELHMVTGFTSKELRLTRSHFLALVKDPSFITREEFLEIPSVANNPLRERLLVCFGFDSMANLKFREXXXXXXXXXXXTAQRDQKLRMAFTLVDIDGDGQVSKNDLVRYLELVT-----AAPEGVKIDLNAVAARIIEEGVSTPGVKSLSLADYIKIMGAADFAD 957
            DL  E LEE+ MVT     +++  R  FL        +T++EFL IP+VA NPLRERL   F       ++F++           ++ RD KL+MAF L D+DGDG+V+K DLV Y++LV       A E  K +++ +A R +EE  S P  + LS  D+ K++   D  D
Sbjct:   13 DLDLERLEEIRMVTQLPISDIQQMRLRFLGWSPSDD-MTKDEFLAIPAVAVNPLRERLFSLFELTPTGTIRFQDFVTLMAVFTYHSS-RDTKLKMAFKLQDVDGDGKVTKGDLVAYMKLVVDFGEMPADEADK-NMDTLAMRTLEEASSDPSGEFLSYDDFAKVVMTTDDYD 181
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BLAST of mRNA_L-elsbetiae_contig1790.5111.1 vs. uniprot
Match: A0A024U202_9STRA (EF-hand domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U202_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.110e-19
Identity = 66/185 (35.68%), Postives = 97/185 (52.43%), Query Frame = 1 
Query:  439 ARDPESDLSTETLEELHMVTGFTSKELRLTRSHFLALVKDPSFITREEFLEIPSVANNPLRERLLVCFGFDSMANLKFREXXXXXXXXXXXTAQRDQKLRMAFTLVDIDGDGQVSKNDLVRYLELVT---AAPEGVKID--LNAVAARIIEEGVSTPGVKSLSLADYIKI-MGAADFADKLTIPL 975
            +++ E DL+ E LEE+ M+T     E+   R  FL    +   +T+E+F  IP VA NPLR RL   F       + F++           ++ RD KLRM+F L D+DGDG++SK DLV Y++LV      P+  ++D  L+ +A R +EE  +      LS  D+ K+ M   DF  KL   L
Sbjct:    6 SKEVECDLNMERLEEIRMLTQLPIPEIIKMRLQFLKWSPNDE-MTQEQFFAIPGVAVNPLRNRLFELFELSPTHTVSFQDFATLMAVFTYHSS-RDNKLRMSFKLQDMDGDGKISKADLVSYMKLVVNFGGVPDPDELDKKLDMLATRTLEEASTDASGDFLSYDDFAKVVMTTDDFETKLLFDL 188
[Close]
BLAST of mRNA_L-elsbetiae_contig1790.5111.1 vs. uniprot
Match: W4GK44_9STRA (EF-hand domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GK44_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 8.740e-18
Identity = 60/180 (33.33%), Postives = 96/180 (53.33%), Query Frame = 1 
Query:  439 ARDPESDLSTETLEELHMVTGFTSKELRLTRSHFLALVKDPSFITREEFLEIPSVANNPLRERLLVCFGFDSMANLKFREXXXXXXXXXXXTAQRDQKLRMAFTLVDIDGDGQVSKNDLVRYLELVTAAPEGVKIDLNAVAARIIEEGVSTPGVKSLSLADYIKIMGAAD-FADKLTIPL 975
            +++ E DLS E LEE+ M+T     ++   R  FL        +T+++F  IP+VA NPLR RL   F   +   + F++              RD KLR++F L D+DGDG+++K DL+ Y++LV     G K+D+  +A+R +EE  +      LS  D+ K++   D +  KL + L
Sbjct:    6 SKEVECDLSLERLEEIRMLTQLPIPDIIKMRVQFLKWSPSDD-MTQDQFFAIPAVAVNPLRHRLFSLFELSASQTIAFQDFASLMAIFTYH-GSRDSKLRLSFKLQDMDGDGRITKPDLIAYMKLVVDF--GDKLDV--LASRTLEEASTDASGDFLSYDDFAKVVTTTDDYETKLLLEL 179
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BLAST of mRNA_L-elsbetiae_contig1790.5111.1 vs. uniprot
Match: A0A1V9YFZ7_9STRA (Calcineurin regulatory subunit B n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YFZ7_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 6.860e-16
Identity = 60/189 (31.75%), Postives = 92/189 (48.68%), Query Frame = 1 
Query:  457 DLSTETLEELHMVTGFTSKELRLTRSHFLALVKDPSFITREEFLEIPSVANNPLRERLLVCFGFDSMANLKFREXXXXXXXXXXXTAQ--------------RDQKLRMAFTLVDIDGDGQVSKNDLVRYLELVTAAPEGVKIDLNA--VAARIIEEGVSTPGVKSLSLADYIKIMGAADFADKLTIPL 975
            DLS E +EE+ M+T    ++++  R  +L    D   +T++ F  IP +A NPL+ERL   F      ++ F              AQ              +D KLR +F + D DGDG++S+ DL+ YL LV A P  +  D+    + AR +EE  S    + L+  D+ K++   +F  KL IPL
Sbjct:   15 DLSPEQIEEIRMLTLLPVEDIQHMRLQYLRWSTDDR-LTKDAFFAIPVIARNPLKERLWSLFESSPDGHVSFHVHCPSYMLYLIWGAQAFVLVMAVFTYHSSKDSKLRASFKMHDFDGDGRLSRADLLSYLRLV-ADPGDMSEDIEKAHLVARTLEEASSDAAAEFLTFDDFTKVVLTTEFEAKLQIPL 201
[Close]
BLAST of mRNA_L-elsbetiae_contig1790.5111.1 vs. uniprot
Match: A0A024U1I7_9STRA (EF-hand domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U1I7_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 1.890e-15
Identity = 49/126 (38.89%), Postives = 71/126 (56.35%), Query Frame = 1 
Query:  439 ARDPESDLSTETLEELHMVTGFTSKELRLTRSHFLALVKDPSFITREEFLEIPSVANNPLRERLLVCFGFDSMANLKFREXXXXXXXXXXXTAQRDQKLRMAFTLVDIDGDGQVSKNDLVRYLELV 816
            +++ E DL+ E LEE+ M+T     E+   R  FL    +   +T+E+F  IP VA NPLR RL   F       + F++           ++ RD KLRM+F L D+DGDG++SK DLV Y++LV
Sbjct:    6 SKEVECDLNMERLEEIRMLTQLPIPEIIKMRLQFLKWSPNDE-MTQEQFFAIPGVAVNPLRNRLFELFELSPTHTVSFQDFATLMAVFTYHSS-RDNKLRMSFKLQDMDGDGKISKADLVSYMKLV 129
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BLAST of mRNA_L-elsbetiae_contig1790.5111.1 vs. uniprot
Match: A0A7S3D416_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3D416_9EUKA)

HSP 1 Score: 79.3 bits (194), Expect = 5.060e-14
Identity = 53/175 (30.29%), Postives = 87/175 (49.71%), Query Frame = 1 
Query:  454 SDLSTETLEELHMVTGFTSKELRLTRSHFLALVKDPSF-ITREEFLEIPSVANNPLRERLLVCFGFDSMANLKFREXXXXXXXXXXXTAQRDQKLRMAFTLVDIDGDGQVSKNDLVRYLELVTAAPEGVKIDLNAVAARIIEEGVSTPGVKSLSLADYIKIMGAADFADKLTIPL 975
            S L+ E ++ +  +T F+ +E++     F  L KD S  IT +EF++IP +A NPL ER++  F  D    + FRE                +KL+ AF + D+DGDG +S  +L   L+++  A     + L  +  + I E       K +S  ++I ++G +    KL IPL
Sbjct:    6 SSLTPEEIQAIENLTSFSEEEIKRLHRRFNKLDKDASGRITIDEFMQIPELATNPLIERVIALFDSDGDETVDFREFVTALSTFSVH-GDPQRKLKFAFRVYDVDGDGFISNGELFTVLKMMVGA-NLTDVQLQQIVDKTIMEADKDRDGK-ISFEEFIALIGHSSMEQKLYIPL 177
[Close]
BLAST of mRNA_L-elsbetiae_contig1790.5111.1 vs. uniprot
Match: A0A067NAC6_9AGAM (Calcineurin subunit B n=4 Tax=Agaricomycetes incertae sedis TaxID=355688 RepID=A0A067NAC6_9AGAM)

HSP 1 Score: 77.4 bits (189), Expect = 2.400e-13
Identity = 53/171 (30.99%), Postives = 85/171 (49.71%), Query Frame = 1 
Query:  463 STETLEELHMVTGFTSKELRLTRSHFLALVKDPS-FITREEFLEIPSVANNPLRERLLVCFGFDSMANLKFREXXXXXXXXXXXTAQRDQKLRMAFTLVDIDGDGQVSKNDLVRYLELVTAAPEGVK-IDLNAVAARIIEEGVSTPGVKSLSLADYIKIMGAADFADKLTI 969
            S++ +EE+   + F S EL   +  F+ L KD S  I REEFL+IP +ANNPL  R++  F  D    + F+E              R++KLR AF + D+D DG +S  +L   L+++      +K   L  +  + I E     G   LS A++  ++   D   ++T+
Sbjct:    5 SSQFMEEMEKKSNFNSAELERLKKRFMKLDKDASGSIDREEFLQIPQIANNPLASRMIAIFDEDGGGTVDFQEFVGGLSAFSSRGG-REEKLRFAFKVYDMDRDGFISNGELFLVLKMMVG--NNLKDTQLQQIVDKTIMEA-DKDGDGKLSFAEFGAMVAKTDIVKQMTL 171
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1790.5111.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LG79_ECTSI1.840e-11364.35EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835YVJ1_9STRA4.490e-3446.45EF-hand domain-containing protein (Fragment) n=1 T... [more]
A0A482SSL2_9ARCH1.300e-2533.14EF-hand domain-containing protein n=1 Tax=archaeon... [more]
A0A485KSR6_9STRA7.960e-2237.79Aste57867_10739 protein n=1 Tax=Aphanomyces stella... [more]
A0A024U202_9STRA1.110e-1935.68EF-hand domain-containing protein n=2 Tax=Aphanomy... [more]
W4GK44_9STRA8.740e-1833.33EF-hand domain-containing protein n=1 Tax=Aphanomy... [more]
A0A1V9YFZ7_9STRA6.860e-1631.75Calcineurin regulatory subunit B n=1 Tax=Achlya hy... [more]
A0A024U1I7_9STRA1.890e-1538.89EF-hand domain-containing protein n=1 Tax=Aphanomy... [more]
A0A7S3D416_9EUKA5.060e-1430.29Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
A0A067NAC6_9AGAM2.400e-1330.99Calcineurin subunit B n=4 Tax=Agaricomycetes incer... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1790contigL-elsbetiae_contig1790:844..5783 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score345.9
Seed ortholog evalue2.1e-92
Seed eggNOG ortholog2880.D8LG79
KEGG koko:K06268,ko:K17610
KEGG Pathwayko04010,ko04020,ko04022,ko04114,ko04218,ko04310,ko04360,ko04370,ko04380,ko04650,ko04658,ko04659,ko04660,ko04662,ko04720,ko04724,ko04921,ko04922,ko04924,ko05010,ko05014,ko05031,ko05152,ko05166,ko05167,map04010,map04020,map04022,map04114,map04218,map04310,map04360,map04370,map04380,map04650,map04658,map04659,map04660,map04662,map04720,map04724,map04921,map04922,map04924,map05010,map05014,map05031,map05152,map05166,map05167
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005509,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0009892,GO:0010563,GO:0010921,GO:0010923,GO:0016020,GO:0019220,GO:0019222,GO:0031323,GO:0031324,GO:0035303,GO:0035305,GO:0043086,GO:0043167,GO:0043169,GO:0044092,GO:0044464,GO:0045936,GO:0046872,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051174,GO:0051336,GO:0051346,GO:0065007,GO:0065009,GO:0071944
EggNOG free text desc.Ca2 -binding protein (EF-Hand superfamily
EggNOG OGsCOG5126@1,KOG0034@2759
COG Functional cat.DTZ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01009
Ec32 ortholog descriptionEF-hand domain pair
Ec32 orthologEc-17_004050.1
Exons9
Model size1028
Cds size978
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1790.5111.1prot_L-elsbetiae_contig1790.5111.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1790 893..5783 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815746.1150393-UTR-L-elsbetiae_contig1790:843..8921622815746.1150393-UTR-L-elsbetiae_contig1790:843..892Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1790 844..892 -
1691683075.6340427-UTR-L-elsbetiae_contig1790:843..8921691683075.6340427-UTR-L-elsbetiae_contig1790:843..892Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1790 844..892 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815746.125888-CDS-L-elsbetiae_contig1790:892..9401622815746.125888-CDS-L-elsbetiae_contig1790:892..940Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1790 893..940 -
1691683075.6474564-CDS-L-elsbetiae_contig1790:892..9401691683075.6474564-CDS-L-elsbetiae_contig1790:892..940Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1790 893..940 -
1622815746.1367722-CDS-L-elsbetiae_contig1790:1530..16111622815746.1367722-CDS-L-elsbetiae_contig1790:1530..1611Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1790 1531..1611 -
1691683075.6573179-CDS-L-elsbetiae_contig1790:1530..16111691683075.6573179-CDS-L-elsbetiae_contig1790:1530..1611Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1790 1531..1611 -
1622815746.1492014-CDS-L-elsbetiae_contig1790:2286..23961622815746.1492014-CDS-L-elsbetiae_contig1790:2286..2396Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1790 2287..2396 -
1691683075.6702409-CDS-L-elsbetiae_contig1790:2286..23961691683075.6702409-CDS-L-elsbetiae_contig1790:2286..2396Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1790 2287..2396 -
1622815746.168329-CDS-L-elsbetiae_contig1790:2933..29741622815746.168329-CDS-L-elsbetiae_contig1790:2933..2974Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1790 2934..2974 -
1691683075.6854599-CDS-L-elsbetiae_contig1790:2933..29741691683075.6854599-CDS-L-elsbetiae_contig1790:2933..2974Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1790 2934..2974 -
1622815746.1868753-CDS-L-elsbetiae_contig1790:3262..32851622815746.1868753-CDS-L-elsbetiae_contig1790:3262..3285Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1790 3263..3285 -
1691683075.6966646-CDS-L-elsbetiae_contig1790:3262..32851691683075.6966646-CDS-L-elsbetiae_contig1790:3262..3285Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1790 3263..3285 -
1622815746.1994128-CDS-L-elsbetiae_contig1790:3574..36511622815746.1994128-CDS-L-elsbetiae_contig1790:3574..3651Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1790 3575..3651 -
1691683075.7090518-CDS-L-elsbetiae_contig1790:3574..36511691683075.7090518-CDS-L-elsbetiae_contig1790:3574..3651Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1790 3575..3651 -
1622815746.2157276-CDS-L-elsbetiae_contig1790:4409..45051622815746.2157276-CDS-L-elsbetiae_contig1790:4409..4505Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1790 4410..4505 -
1691683075.7182558-CDS-L-elsbetiae_contig1790:4409..45051691683075.7182558-CDS-L-elsbetiae_contig1790:4409..4505Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1790 4410..4505 -
1622815746.2293863-CDS-L-elsbetiae_contig1790:4736..49181622815746.2293863-CDS-L-elsbetiae_contig1790:4736..4918Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1790 4737..4918 -
1691683075.7281456-CDS-L-elsbetiae_contig1790:4736..49181691683075.7281456-CDS-L-elsbetiae_contig1790:4736..4918Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1790 4737..4918 -
1622815746.2403696-CDS-L-elsbetiae_contig1790:5463..57831622815746.2403696-CDS-L-elsbetiae_contig1790:5463..5783Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1790 5464..5783 -
1691683075.736305-CDS-L-elsbetiae_contig1790:5463..57831691683075.736305-CDS-L-elsbetiae_contig1790:5463..5783Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1790 5464..5783 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1790.5111.1

>prot_L-elsbetiae_contig1790.5111.1 ID=prot_L-elsbetiae_contig1790.5111.1|Name=mRNA_L-elsbetiae_contig1790.5111.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=326bp
FSAENDDSNIESVATSPRRGRNGLAAVQASGPLRIPSNRSQNTSDAPTTS
RAYGGGLATVRASERFLQQSKNHNSSSRDTTRVRSFSESRGGLGADNAGK
LMEEGISHVQGSKTLLGGKVEVGEGSSNHRNHDVGFLAALRTMIFGARDP
ESDLSTETLEELHMVTGFTSKELRLTRSHFLALVKDPSFITREEFLEIPS
VANNPLRERLLVCFGFDSMANLKFREFVEILSIFNNPTAQRDQKLRMAFT
LVDIDGDGQVSKNDLVRYLELVTAAPEGVKIDLNAVAARIIEEGVSTPGV
KSLSLADYIKIMGAADFADKLTIPL*
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mRNA from alignment at L-elsbetiae_contig1790:844..5783-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1790.5111.1 ID=mRNA_L-elsbetiae_contig1790.5111.1|Name=mRNA_L-elsbetiae_contig1790.5111.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4940bp|location=Sequence derived from alignment at L-elsbetiae_contig1790:844..5783- (Laminarionema elsbetiae ELsaHSoW15)
TTTTCGGCCGAGAACGATGACAGCAATATCGAGAGCGTCGCGACGAGCCC
CAGGCGGGGCAGGAATGGCTTGGCTGCCGTGCAGGCAAGCGGACCTCTCA
GGATCCCCAGCAACCGCAGTCAAAACACGAGCGATGCGCCGACCACGAGT
AGGGCCTACGGCGGTGGCTTGGCCACTGTACGCGCGAGCGAGCGGTTTCT
CCAACAGAGCAAAAATCACAACAGCAGCAGTAGAGACACCACCCGGGTTC
GATCCTTCAGTGAGAGTCGTGGCGGCCTTGGTGCCGACAACGCCGGGAAG
CTGATGGAAGAAGGCATCAGGTATACTTGTCGTTCAAAGCACCTTTCTCT
GCACTTGTCGGGTGGGTGGCATTCGTTCGTTCTTCGGGGAACTTTGTGTC
CACAGGAGTTCACGGCAGGTCTCGACAGGGGTACTGTACCTACCTCCGAA
ATACGGCAAATCTCTGCCAGTTGTTGATGCCACAACAATTTGTTGCACGG
CACAGAGAGAGGCACATCCAACGGTGGTGTTCCCCTCGAACACTCAACCG
TTTGGTTCAACATTAATGGTGCTGCTGTTGGCAGATGCACTCGCAGCCTG
TGCTTGACTGTCGATGTTCATACAGCAGTAAAAAACATTCTCCGAGAAAC
GGTGTATCTAGATACATACCAAGAGTTTGTGTATCGTATAGTCTAAGGCG
TCCCCCACGATGCGCACGCGCGTCGCCTGTAGACTATATCTATCGTATGT
ACCAAAGCACATTTTGTCGCAGTCTGGCGTATTTCCTCGCATGGTCACGA
CCCTTTCCCACGTGCCACGCCGCTAAATCGAATCTGTATTTCCCCTTGCC
TTGGACCATCAACAGCCATGTTCAAGGCAGCAAGACGCTATTAGGCGGCA
AGGTCGAGGTTGGCGAGGGCTCGAGCAACCACCGGAATCACGATGTCGGC
TTCCTGGCAGCGCTGAGGACGATGATCTTTGGAGCGCGCGACCCAGAGTC
TGACCTGAGTACCGAGACCCTCGAGGAGCTGCACATGGTTACGGGTTGTG
AGTCAGCTCGTCCTCTGGCTGCATGTGTCGCCGCCAGCTTGCGTCGCCCC
TCCCGGCCTGCAAGCTCACGTTGCTCATGAGTCCCTCTTTCCACAAAATG
CAAGCGTGGAGAGGTTCTCCGACAAACGCGCCTGCAGCGCCAACCGCACG
CTGCCACCGTTTAGTAGTCGTCCAAACCCCCTCGCCGTGCGAATGAATGC
CAATGCTACGTTTGTTCTGTCCCCCCAGTCACGTCCAAGGAGCTGAGACT
CACCCGGTCCCACTTCCTTGCGCTTGTGAAAGATCCCAGTTTCATCACTC
GGGAGGAGTTTCTCGAGATACCATGTGAGGCGGTAGCAGTAAGTCAGCCA
CAGACACGTATTGGCTGAGGAATCGAACGATAAAAAGCACGATGACCACC
AGACGGCCGATCGGCGTGGGCAGCACGCTATGTAGGCATGCATGCGGTAA
TTTGATATTTTTGCCCCAGCGACCCACTACTGCTGTGCATATGTAGAGAC
AGCCCCGCTCGGCGAACAGCCGGTCGGGTTCGCAGCGGTATGAACCGATT
CATTTTTCCACTCCAGGAAGGATGCGAGTTCTGAGAAGAGAGGAGTCTCG
GCGGTAAATGTGTGCTTCAACATACTTGCGTACGACGGGTTGGCGCAAAC
GCCCACTGCAGAAGACAGGGTTAGAAGTGCACGCACGGCTCTTCTTCCCT
TCTGCGCCTCGAATACCGAGAAAGCCGCAGCACCACCGAATAGCCCCGAC
GCATGGGATCCTCTGGCACACATTACAGTAGTAGTACCGTAGGTGACACA
AGATACCACACCCCCCGGACCGACTTTTAGAGCTCCATTACTCCGTAACG
AAGAGGGTGCCAGCGCTAAACGACACATTTTCAGACAGCCCTTGATGAGA
TATTTACAACGCCACCCTCTTTCGGCATGGCGCTCTTCTTGCTGGGGAGG
AATCGAGCTTTGAAAATATGTCCGGGGGGTGTGGTATCTTGTGTCACCTA
CGGTGCGGTAGTGTGGAATTGGCTGTGTACCGCTCAGCTCACGACGCCCT
GCAAATCTCCCCTTCCGCTCTTTCTTTCGCAGCTGTCGCCAATAACCCGC
TCAGAGAAAGGCTGCTCGTGTGCTTCGGCTTCGATTCGATGGCCAACTTG
AAGTTCAGGGTAAGCTCGCAACGCCGACGAATTCTTCCGCGCACGGACAG
TAGTAACTCCCTTGTTGTCGTTCGTGCAAAAGCAAATGGTTCGCCGATCG
TACCGCGGAGACAGAACCGACTTTGGGAGGAAGAGAAAATAAAGGCGGCG
AAACAAAGCACACCTTGTTGTTGTTGTGGCCAACCTGAACACTTGCCCCC
GCAACCCTCTGAACACTCGAACTTTCTCCGCTGTTCACACCGGAACCTGT
AATAACTTGTAATGACTGCGGGTGTTCTGGGCCTGCATCCTCTCGCAGGA
GTTCGTGGAGATCCTCTCAATGTGAGCATGCTGTTTGGTACACGCGGCCC
GGTCTCGGAGAAAGGCGTCTGTGGCCGCGTCGCCGCCGAGATCAATCACC
CCAGAACCCTGCGTTTAGGGAGGAAAACGCTCTCCATTCAGCCGCCGGAA
GCTTGTGCGACACTCTCCGGTTGTGTTTTGCGCCACGGCCGAACGCCACA
AAGTGTCCAACTGTCGGGTTCCGTCCAGCCACACAGCGTAGTTCGTGCTC
TGGGCCATGACTTACTCGCTGCCCTTTTATGATCCTCGGTTCTCGGCCCT
CTCTCGCAGCTTCAACAATCCAACTGCTCAGAGGGACCAGAAGTTGAGAA
GTGAGTGCTAAACCCAAAGGAGAGGTAGTTATACGCGACGAGGTTTTGAC
ACATGTACCGTAACCCGCTAAGACCGCAAGTCCAAGTCCCGCCCGCGTAC
GCACATAGTATGAATCGGCACGTAGCACGTTCTCTCTCGCTTCTTGGGAG
CAGAGGGGGGAGCACGCCCCATGAGGATCGCTTATGTAGGCCGCGATCCG
GGCCGATGACATTGCCCATATCTGGAGGGTCAGTTTCCCGCTGGGCCGCC
TCAGCCTGCCCACCTGCGCTGCTGCTGCTGCTGCTGCTACAGACGTGTGT
CGAATCACAAACCAAAGAGCTTGCTGAAGCACTACCCTGGCATGGCTCAA
AACTGCTCGCTGCCTGCTGTCTATGGGTCTTCCAACCAACCGAGCAAGAC
CAATACACGAGTTACCCCCTCTCTTGCCCGATATCACGTGTATTTATGTG
CGCTACACTACTACTGTTGTTGTATTTATCACCATCGTACCATGGAGCAT
ACACTTAGCGACCCTTGCCCGTCCCATCTGTTTGCAGTGGCCTTCACCCT
TGTCGACATCGACGGCGACGGCCAGGTGTCCAAGAACGACCTCGTGCGGT
ACCTCGAGCTCGTCACGGCCGCCCCGGAGGGCGTGAAAATCGACCTGGTA
AGTTGGAGTGGTGCAATAGGGCTCAGGGGTGTCTCGTGCCCAGTGCTGAG
AAGCGTGGGGGAGGGTAGGAATCGACCCTTCGACGCGTGTACCTACTAGG
GGGGCGCGCCGGGGGGGAGCTTGAGCGGGCCTGGAGCTGCTTGGAATCCC
CCCCATGTGGAGGGGGAAGAAAGGGCTGCGCGAGGACACGCCTGATCGTA
ATTTTCTTCTTATCGTAGAGTTTGGTTGTGGTGGCGCGCCTGGTCATTCT
CTTTGCCTTGGTTTGTTTGTGACTCCGCGCCTAACCGGGGTCTTTCGGTT
TTGCTTGTGATTTTGCTTTTGGCGAAAGTTCTACAACAACAGTAGGTAAC
GTGGCACGTGTTTGTACGTTTCTACGGGAGCATCGTACGCCTCCCTTCGC
GTTGACACAGTCGGGGTTGAGCTGCAACAACAGCCTCACACCACGAGCGT
TTTTGTCGTGTTCTTGCTTCCAGCCCCAAACGCGAAAACCGTTTTGTTGC
TACTTAAAAAAAACGCGAAGAATGTTGCGCGAATTTCAAGCCGAAGCCCA
CCACAGGTCCACTTTTTGACTTTGGGCGCATTTTATGCAAAACTTGAAAC
TTAGAACCTGACCGCCTCGATTCCGCCACTTGCCCCCCCCGCCCCTCGTC
AAAACGTCCTCCCAACTTTTAGAACGCCGTAGCGGCGAGAATTATCGAGG
AAGGCGTGTCAACTCCTGGAGTCAAGTCGCTTTCCCTGGCGGACTACATC
AAGGTTCGTTTCGAATTGAGAAAATGTCGTTCGTCCACTTGGGGGGTAGT
AAGCAGCGGCAGAGAGTGGAGGGGGGGGTCTCTGGTGTTGCTGAATGATT
GCCTTTCAAATTCCAGGCAGTTCGGGCGGCATGACTTGCGAGACAGACAC
ACTCCAGGGTATTTCGGAATCCGCCACAGCGACTAAGGAGCCGCGACACA
GGGTACATATGTATATTGGCAACGGAAACAATATTACTACAGTTGTTTGG
GTATACAGGTCTGTAGTATAAGGCCCACAAACCCATTCGATGAAGGAAAC
CGCCGCACACCCTGTCCAGCTTTCTTTGCGGTCCACGCCTCTTTGTGTTG
TCTGGGGCCTTTCCCGAAGACGTATTTCTCAGCTTCTTGTATTATCAATT
ACCTACTTATCATTCATTCAAACAAATGTCGCCTAAACAACAGATACTGG
CAAAAGACTCATCCTTCTGATTTTCCGTTTTTTACCCGCATTTTTGGTGC
CCGTTTCCCTTCCCGTGTTGCTCCTCTGGCTCCCTCCACGACAAATCACC
CGGTCGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGTGATCAGATCATGG
GCGCGGCCGATTTCGCAGACAAACTGACCATTCCTTTGTGACGGACGGCG
GATACGAGTAGTAGTCCAGAAATAACTGCATTGTGGAGGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1790:844..5783-

>mRNA_L-elsbetiae_contig1790.5111.1 ID=mRNA_L-elsbetiae_contig1790.5111.1|Name=mRNA_L-elsbetiae_contig1790.5111.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1956bp|location=Sequence derived from alignment at L-elsbetiae_contig1790:844..5783- (Laminarionema elsbetiae ELsaHSoW15)
TTTTCGGCCGAGAACGATGACAGCAATATCGAGAGCGTCGCGACGAGCCC
CAGGCGGGGCAGGAATGGCTTGGCTGCCGTGCAGGCAAGCGGACCTCTCA
GGATCCCCAGCAACCGCAGTCAAAACACGAGCGATGCGCCGACCACGAGT
AGGGCCTACGGCGGTGGCTTGGCCACTGTACGCGCGAGCGAGCGGTTTCT
CCAACAGAGCAAAAATCACAACAGCAGCAGTAGAGACACCACCCGGGTTC
GATCCTTCAGTGAGAGTCGTGGCGGCCTTGGTGCCGACAACGCCGGGAAG
CTGATGGAAGAAGGCATCAGTTTTCGGCCGAGAACGATGACAGCAATATC
GAGAGCGTCGCGACGAGCCCCAGGCGGGGCAGGAATGGCTTGGCTGCCGT
GCAGGCAAGCGGACCTCTCAGGATCCCCAGCAACCGCAGTCAAAACACGA
GCGATGCGCCGACCACGAGTAGGGCCTACGGCGGTGGCTTGGCCACTGTA
CGCGCGAGCGAGCGGTTTCTCCAACAGAGCAAAAATCACAACAGCAGCAG
TAGAGACACCACCCGGGTTCGATCCTTCAGTGAGAGTCGTGGCGGCCTTG
GTGCCGACAACGCCGGGAAGCTGATGGAAGAAGGCATCAGCCATGTTCAA
GGCAGCAAGACGCTATTAGGCGGCAAGGTCGAGGTTGGCGAGGGCTCGAG
CAACCACCGGAATCACGATGTCGGCTTCCTGGCAGCGCTGAGGACGATGA
TCTTTGGAGCGCGCGACCCAGAGTCTGACCTGAGTACCGAGACCCTCGAG
GAGCTGCACATGGTTACGGGTTCCATGTTCAAGGCAGCAAGACGCTATTA
GGCGGCAAGGTCGAGGTTGGCGAGGGCTCGAGCAACCACCGGAATCACGA
TGTCGGCTTCCTGGCAGCGCTGAGGACGATGATCTTTGGAGCGCGCGACC
CAGAGTCTGACCTGAGTACCGAGACCCTCGAGGAGCTGCACATGGTTACG
GGTTTCACGTCCAAGGAGCTGAGACTCACCCGGTCCCACTTCCTTGCGCT
TGTGAAAGATCCCAGTTTCATCACTCGGGAGGAGTTTCTCGAGATACCAT
TCACGTCCAAGGAGCTGAGACTCACCCGGTCCCACTTCCTTGCGCTTGTG
AAAGATCCCAGTTTCATCACTCGGGAGGAGTTTCTCGAGATACCATCTGT
CGCCAATAACCCGCTCAGAGAAAGGCTGCTCGTGTGCTTCGGCTTCGATT
CGATGGCCAACTTGAAGTTCAGGCTGTCGCCAATAACCCGCTCAGAGAAA
GGCTGCTCGTGTGCTTCGGCTTCGATTCGATGGCCAACTTGAAGTTCAGG
GAGTTCGTGGAGATCCTCTCAATGAGTTCGTGGAGATCCTCTCAATCTTC
AACAATCCAACTGCTCAGAGGGACCAGAAGTTGAGAACTTCAACAATCCA
ACTGCTCAGAGGGACCAGAAGTTGAGAATGGCCTTCACCCTTGTCGACAT
CGACGGCGACGGCCAGGTGTCCAAGAACGACCTCGTGCGGTACCTCGAGC
TCGTCACGGCCGCCCCGGAGGGCGTGAAAATCGACCTGTGGCCTTCACCC
TTGTCGACATCGACGGCGACGGCCAGGTGTCCAAGAACGACCTCGTGCGG
TACCTCGAGCTCGTCACGGCCGCCCCGGAGGGCGTGAAAATCGACCTGAA
CGCCGTAGCGGCGAGAATTATCGAGGAAGGCGTGTCAACTCCTGGAGTCA
AGTCGCTTTCCCTGGCGGACTACATCAAGAACGCCGTAGCGGCGAGAATT
ATCGAGGAAGGCGTGTCAACTCCTGGAGTCAAGTCGCTTTCCCTGGCGGA
CTACATCAAGATCATGGGCGCGGCCGATTTCGCAGACAAACTGACCATTC
CTTTGTGAATCATGGGCGCGGCCGATTTCGCAGACAAACTGACCATTCCT
TTGTGA
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