mRNA_L-elsbetiae_contig1789.5104.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1789.5104.1 vs. uniprot
Match: A0A6H5JPJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ6_9PHAE) HSP 1 Score: 237 bits (605), Expect = 1.540e-71 Identity = 125/208 (60.10%), Postives = 146/208 (70.19%), Query Frame = 2 Query: 161 GETCIVEAARQYLNEKQSLVDSLRPDDYRRVDAGIGASVGGHMRHTLDHFSKCLAAAQSPPIGNATTTAAPGNELQQEASDNNPAVAIRYDHRVRGGSIEMCPSAASRCISSLLQQLQELPRGRELRKEHVRATFMLALEGS----REEHQFESNLERELFFCCHHGTHHDAMIQLILRGMGDKGQAALCQAGPGLGVAPSTLEHLQR 772 G TC+V AA ++L K+ LVD L P DY R+D GASVGGH+RHTLDHFSKCL AAQ P + ++A V IRYDHRVRGG+IE P+AASR ISSLLQQLQ LPR LR + V FML L G +EE+ FESNLERELFFCCHHGTHHDAMI+LILRGMG+KG+ AL QAG G GVAPST++ L++ Sbjct: 53 GGTCVVSAAMRFLQGKKRLVDCLSPADYARMDPATGASVGGHLRHTLDHFSKCLQAAQQQPAPD------------EDAVPTTTPVTIRYDHRVRGGTIETDPAAASRSISSLLQQLQSLPRADYLRAKRVAPMFMLGLGGGDNGIKEEYGFESNLERELFFCCHHGTHHDAMIRLILRGMGEKGENALSQAGEGFGVAPSTIDFLKK 248
BLAST of mRNA_L-elsbetiae_contig1789.5104.1 vs. uniprot
Match: D7FP30_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP30_ECTSI) HSP 1 Score: 233 bits (595), Expect = 4.180e-70 Identity = 123/208 (59.13%), Postives = 144/208 (69.23%), Query Frame = 2 Query: 161 GETCIVEAARQYLNEKQSLVDSLRPDDYRRVDAGIGASVGGHMRHTLDHFSKCLAAAQSPPIGNATTTAAPGNELQQEASDNNPAVAIRYDHRVRGGSIEMCPSAASRCISSLLQQLQELPRGRELRKEHVRATFMLALEG----SREEHQFESNLERELFFCCHHGTHHDAMIQLILRGMGDKGQAALCQAGPGLGVAPSTLEHLQR 772 G C+V AA ++L K+ LVD L P DY +D IGASVGGH+RHTLDHFSKCL AAQ P + ++A V IRYDHR RGG+IE P+AASR ISSLLQQLQ LP R LR + V FML L G S +E++FESNLERELFFCCHHGTHHDAMIQLILRGMG+KG+ AL QAG GVAPST++ L++ Sbjct: 49 GGRCVVSAAMRFLQGKKRLVDCLSPADYAHMDPAIGASVGGHLRHTLDHFSKCLQAAQQQPAPD------------EDAVPTTTPVTIRYDHRARGGNIETDPAAASRSISSLLQQLQSLPTARYLRAKRVAPMFMLGLGGDDNNSTKEYEFESNLERELFFCCHHGTHHDAMIQLILRGMGEKGENALSQAGEAFGVAPSTIDFLKK 244
BLAST of mRNA_L-elsbetiae_contig1789.5104.1 vs. uniprot
Match: A0A2R5GC69_9STRA (FK506-binding protein 5 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GC69_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 1.750e-15 Identity = 62/204 (30.39%), Postives = 102/204 (50.00%), Query Frame = 2 Query: 167 TCIVEAARQYLNEKQSLVDSLRP----DDYRRVDAGIGASVGGHMRHTLDHFSKCLAAAQSPPIGNATTTAAPGNELQQEASDNNPAVAIRYDHRVRGGSIEMCPSAASRCISSLLQQLQELPRGRELRKEHVRATFMLALEGSREEHQFESNLERELFFCCHHGTHHDAMIQLILRGMGDKGQAALCQAGP-GLGVAPSTLEH 763 T +VEA+R+ L +KQ L+ ++ + Y +G+++GGH+RH LDH+ + L + + +A ++ + YD R+RGG +E S+A I + ++L + E+ ++ F L+ + FES REL+F HH HH AMI+LI++ +K L QA P G+APST+ H Sbjct: 3 TKLVEASRRVLMQKQLLLSTMERLGCYEAYATKCPVVGSTIGGHVRHALDHYDRAL------------------DGILSKAKTSSSLSLVDYDTRLRGGDVEKDLSSAVEAILNCSERLGSITE--EMLARPMQVQFNLSGNDD-SKFLFESYAARELWFAAHHSIHHQAMIKLIIQCHDEK--KTLAQALPRDFGMAPSTVLH 183
BLAST of mRNA_L-elsbetiae_contig1789.5104.1 vs. uniprot
Match: A0A7S1U1W9_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U1W9_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 1.100e-14 Identity = 65/182 (35.71%), Postives = 78/182 (42.86%), Query Frame = 2 Query: 158 SGETCIVEAARQYLNEKQSLVDSL---RPDDYRRVDAGIGASVGGHMRHTLDHFSKCLAAAQSPPIGNATTTAAPGNELQQEASDNNPAVAIRYDHRVRGGSIEMCPSAASRCISSLLQQLQELPRGRELRKEHVRATFMLALEGSREEHQFESNLERELFFCCHHGTHHDAMIQLILRGMG 694 SG ++ AA L K L+ SL R + Y V GASVG HMRH+L HF+ L + YD R RG +IE A I L + +P + E VR FML +G EH FES LERELFF HH HHDA I IL+ G Sbjct: 96 SGRGNVLSAAAFSLRNKGELLASLQERRAEAYTAVSPSQGASVGQHMRHSLQHFTALL--------------------------KREGGAVVAYDKRERGNAIETDLEEARATIRDLEATIGGIPE--DGLGERVRVRFMLNGDGL--EHDFESTLERELFFVVHHSVHHDATIGTILKEQG 247
BLAST of mRNA_L-elsbetiae_contig1789.5104.1 vs. uniprot
Match: A0A7S2SLH2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SLH2_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 1.410e-14 Identity = 80/222 (36.04%), Postives = 104/222 (46.85%), Query Frame = 2 Query: 152 SRSGETCIVEAARQYLNEKQSLVD---SLRPDDYRRVDAGIGASVGGHMRHTLDHFSKCLAAA-QSPPIGNATTTAAPGNELQQEASDNNPAVAIRYDHRVRGGSIEMCPSAASRCISSLLQQLQEL-PRGRELRKEHVRATFMLALEGSREEHQ-FESNLERELFFCCHHGTHHDAMIQLILRGMGD--KGQAA-LCQAGPGLGVAPSTLEHLQREMPGEG 790 S S E +V A R L +K L+ + PD Y R GASVG H+RH+LDH A A + A + P + Q + YD R R +E C AA +S++ Q L+ L P +L + A FMLA E+ S++ REL F HH HH A I ILR D +G AA L + P GVAPST+ Q + PGEG Sbjct: 5 SASRELVLV-AVRAILRQKACLLHVFARVDPDLYTRPCRVAGASVGQHVRHSLDHLRVATAGALRCQQAAAAVAASHPPSTCPQRPM-------VDYDTRQRHTEVERCLQAAHEAVSAMKQDLELLSPADLDLALD---AQFMLAAHLPPSENPVLPSSVARELAFSAHHAIHHHATILQILRTNHDIPEGLAAELLRREPDFGVAPSTVS-FQGDHPGEG 214
BLAST of mRNA_L-elsbetiae_contig1789.5104.1 vs. uniprot
Match: A0A5Q4EQU3_9BACT (Uncharacterized protein n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A5Q4EQU3_9BACT) HSP 1 Score: 80.1 bits (196), Expect = 8.010e-14 Identity = 63/197 (31.98%), Postives = 83/197 (42.13%), Query Frame = 2 Query: 176 VEAARQYLNEKQSLVDSLRPDDYRRVDAGI-GASVGGHMRHTLDHFSKCLAAAQSPPIGNATTTAAPGNELQQEASDNNPAVAIRYDHRVRGGSIEMCPSAASRCISSLLQQLQELPRGRELRKEHVRATFMLALEGSREEHQFESNLERELFFCCHHGTHHDAMIQLILRGMGDKGQAALCQAGPGLGVAPSTLEH 763 V AA + L++ SL++ + + Y + GA+VG H+RHTLDHFS L++ PI RYD R RG IE S A + L L L R V+ T + L E + ES L REL F HH THH AMI + MG + G AP+T+ H Sbjct: 17 VRAALRLLSDGASLLERISDEQYTLPSPALRGATVGQHIRHTLDHFSAILSSLSGEPI--------------------------RYDQRKRGTVIETSRSDAMDRVGQLSDALGALDSERS----GVQVTVVSLLNPDDPETELESTLARELAFATHHATHHHAMILVAAEAMG-------VELPADFGRAPATVRH 176
BLAST of mRNA_L-elsbetiae_contig1789.5104.1 vs. uniprot
Match: A0A482SB45_9ARCH (DinB family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SB45_9ARCH) HSP 1 Score: 80.1 bits (196), Expect = 1.930e-13 Identity = 59/211 (27.96%), Postives = 95/211 (45.02%), Query Frame = 2 Query: 173 IVEAARQYLNEKQSLVDSLRPDDYRRVDAGI-GASVGGHMRHTLDHFSKCLAAAQSPPIGNATTTAAPGNELQQEASDNNPAVAIRYDHRVRGGSIEMCPSAASRCISSLLQQLQELPRGRELRKEHVRATFMLALEGSREEHQFESNLERELFFCCHHGTHHDAMIQLILRGMGDKGQAALCQAGPGLGVAPSTLEHLQREMPGEGQEKV 802 I+ A L +K ++D L +DY + + I +S+GGH+RH++DH+ + AA SP + YD R R +E AA + +L ++L++L + + + T + S + REL F HHG HH +MI+L+L+GMG A +G+APST+ H ++ P E K Sbjct: 49 ILSQAHSMLQQKLLVLDLLTDEDYCKKNVDIFNSSIGGHLRHSMDHYEALVTAASSP------------------------SSFADYDSRSRNTLVETNRKAAKDSVLALQKKLEKLDLEKNIEVSFIGETKTFT------SFKLTSTVARELSFASHHGIHHMSMIKLLLQGMGYS-----LPAEANVGIAPSTVLH-HKQHPEESLIKA 223
BLAST of mRNA_L-elsbetiae_contig1789.5104.1 vs. uniprot
Match: A0A3B8Q1I8_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A3B8Q1I8_9BACT) HSP 1 Score: 71.6 bits (174), Expect = 1.120e-10 Identity = 62/211 (29.38%), Postives = 91/211 (43.13%), Query Frame = 2 Query: 173 IVEAARQYLNEKQSLVDSLRPDDY-RRVDAGIGASVGGHMRHTLDHFSKCLAAAQSPPIGNATTTAAPGNELQQEASDNNPAVAIRYDHRVRGGSIEMCPSAASRCISSLLQQLQELPRGRELRKEHVRATFMLALEGSREEHQFE--------SNLERELFFCCHHGTHHDAMIQLILRGMGDKGQAALCQAGPGLGVAPSTLEHLQREM 778 I+ AA + L++ + L+ +L PD+Y R+V A AS+GGH RH LDHF+ + L + D YDHR R +E P A +L +L + V + A +R E +E S + REL + HG HH A+I ++ R + A L P GVAPST+ H + E+ Sbjct: 37 ILRAAAEILHQGELLLGALSPDNYSRKVPAVFNASIGGHYRHCLDHFTSLF------------------DGLDDDLVD--------YDHRARDPRLEREPEFARNVTRALRARLAQ-----------VELATLAAPVSARCEVSYEQGDSPVTYSTVGRELVYAIAHGIHHYALISVMARLL----NATL---PPNFGVAPSTVAHQKAEV 203
BLAST of mRNA_L-elsbetiae_contig1789.5104.1 vs. uniprot
Match: A0A7S4T454_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T454_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 1.920e-10 Identity = 62/206 (30.10%), Postives = 97/206 (47.09%), Query Frame = 2 Query: 197 LNEKQSLVDSLRPDD--------YRRVDAGIGASVGGHMRHTLDHFSKCLAAAQSPPIGNATTTAAPGNELQQEASDNNPAVAIRYDHRVRGGSIEMCPSAASRCISSLLQQLQELPRGRELRKEHVR------ATFMLALE-----GSREEHQFESNLERELFFCCHHGTHHDAMIQLILRGMGDKGQAALCQAGPGLGVAPSTL 757 L++K +L+D+L + +R IGAS+G H RH++DH LAA A+T A G + S+N + YD RVRGG++E + + I S++ Q+L ++ + +V A F L+ G +E S + REL FC HH HH AM+++I ++ + P G APST+ Sbjct: 17 LSQKVALIDALTINHGADKARVVFRSACPLIGASIGQHYRHSMDHIE--LAALV------ASTGTAEG--INANNSENISTPPLHYDLRVRGGTLEHDMDESRKRILSVMDIFQDLELKQQTEESNVITNCPVVAHFYLSPSEDEKGGGSQEIGLTSTIGRELGFCAHHAIHHMAMVKIIALNFAG---LSVDELPPDFGKAPSTI 209
BLAST of mRNA_L-elsbetiae_contig1789.5104.1 vs. uniprot
Match: F0W0Z2_9STRA (Uncharacterized protein AlNc14C5G772 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W0Z2_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 1.520e-9 Identity = 54/188 (28.72%), Postives = 88/188 (46.81%), Query Frame = 2 Query: 197 LNEKQSLVDSLRPDDYRRVDAGIGASVGGHMRHTLDHFSKCLAAAQSPPIGNATTTAAPGNELQQEASDNNPAVAIRYDHRVRGGSIEMCPSAASRCISSLLQQLQELPRGRELRKEHVRATFMLALEGSREEHQFESNLERELFFCCHHGTHHDAMIQLILRGMGDKGQAALC--QAGPGLGVAPST 754 L ++++L+ +L + Y+ I +S+G H+RH+LDHF+K P+ + T +RYD R R E +A + + S+ + ++ L + K+ V +FML+ +G E +F S L RE+ F HH HH+A I+ IL+ +C Q G APST Sbjct: 36 LFQEETLIKALTDEQYQFQCPWIKSSIGQHVRHSLDHFTK--------PLETSNTV-------------------VRYDLRDRNTDAENRVKSAEKALLSIRKSVENLEMDQ--MKKSVTVSFMLSADGK--ECEFLSTLGREMAFAAHHCIHHNAAIKQILQR-----HFPICFDQLPSDFGTAPST 187 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1789.5104.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1789.5104.1 >prot_L-elsbetiae_contig1789.5104.1 ID=prot_L-elsbetiae_contig1789.5104.1|Name=mRNA_L-elsbetiae_contig1789.5104.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=243bp MISHTASRLAIALRVRGLATTVVSPSRSGETCIVEAARQYLNEKQSLVDSback to top mRNA from alignment at L-elsbetiae_contig1789:975..2525+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1789.5104.1 ID=mRNA_L-elsbetiae_contig1789.5104.1|Name=mRNA_L-elsbetiae_contig1789.5104.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1551bp|location=Sequence derived from alignment at L-elsbetiae_contig1789:975..2525+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1789:975..2525+ >mRNA_L-elsbetiae_contig1789.5104.1 ID=mRNA_L-elsbetiae_contig1789.5104.1|Name=mRNA_L-elsbetiae_contig1789.5104.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1458bp|location=Sequence derived from alignment at L-elsbetiae_contig1789:975..2525+ (Laminarionema elsbetiae ELsaHSoW15)back to top |