mRNA_L-elsbetiae_contig17829.5081.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig17829.5081.1 vs. uniprot
Match: D8LRN1_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D8LRN1_ECTSI) HSP 1 Score: 241 bits (614), Expect = 2.570e-77 Identity = 111/146 (76.03%), Postives = 125/146 (85.62%), Query Frame = 2 Query: 77 NVPQQYDGMIPVALNNVQYGDSLMCGACIEGTASGNGSGNTPIPSTFKAFVTDKCPECDEGDLDFSMSGDGRWGIEWKFVECPGEDLSFVSPSANPYYMKVQPRGTKTPVETLTIAGQTATRMQDNHFVVQNNSGSAWPGTQSITT 514 +VP+ YDGMIPVALN QYGDSLMCGAC+EGTASG+GSGN PIPSTFKAF+TDKCPEC +GDLDFSMSGDGRW IEWKFV CPGE+ SFVSPSANPYY KVQPRGT TPV +LT+ GQ+A R DNHF V N+ G+AW G Q++ T Sbjct: 128 DVPEMYDGMIPVALNAEQYGDSLMCGACVEGTASGSGSGNNPIPSTFKAFITDKCPECQKGDLDFSMSGDGRWDIEWKFVACPGEETSFVSPSANPYYWKVQPRGTTTPVVSLTVDGQSAMRTTDNHFEVHND-GAAWSGAQTVVT 272
BLAST of mRNA_L-elsbetiae_contig17829.5081.1 vs. uniprot
Match: D8LGP4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP4_ECTSI) HSP 1 Score: 186 bits (471), Expect = 1.730e-53 Identity = 87/145 (60.00%), Postives = 102/145 (70.34%), Query Frame = 2 Query: 83 PQQYDGMIPVALNNVQYGDSLMCGACIEGTASGNGSGNTPIPSTFKAFVTDKCPECDEGDLDFSMSGDGRWGIEWKFVECP-GEDLSFVSPSANPYYMKVQPRGTKTPVETLTIAGQTATRMQDNHFVVQNNSGSAWPGTQSITT 514 P YDGM PVALN QYGDSLMCGAC+EG +G GSG+ P+ TFK F+ DKCPEC EGDLDF DGRW I+WKFVECP GE++SF YY K+QPRGT TPVE+LTI G+ A R DNHF +++ SG W Q + T Sbjct: 337 PSIYDGMTPVALNEPQYGDSLMCGACVEGEGTGGGSGSDPV-GTFKGFIMDKCPECSEGDLDFGTGKDGRWDIKWKFVECPAGEEVSFKVEQKTEYYWKIQPRGTATPVESLTIGGRAAARTDDNHFELEHPSGDPWYEPQMVVT 480
BLAST of mRNA_L-elsbetiae_contig17829.5081.1 vs. uniprot
Match: A0A6H5KBW3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBW3_9PHAE) HSP 1 Score: 186 bits (472), Expect = 2.450e-53 Identity = 85/144 (59.03%), Postives = 101/144 (70.14%), Query Frame = 2 Query: 83 PQQYDGMIPVALNNVQYGDSLMCGACIEGTASGNGSGNTPIPSTFKAFVTDKCPECDEGDLDFSMSGDGRWGIEWKFVECPGEDLSFVSPSANPYYMKVQPRGTKTPVETLTIAGQTATRMQDNHFVVQNNSGSAWPGTQSITT 514 P Y GM PVALN QYGDSLMCG+C+EG +G G G+ PI TFK F+ DKCPEC EGDLDF DGRW IEW+FV CPGE++SF PYY K+QPRGT TPVE+LTI G+ A R DNHF +++ SG+ W Q + T Sbjct: 374 PSIYSGMTPVALNAAQYGDSLMCGSCVEGEGTGGGGGDNPI-GTFKGFIMDKCPECHEGDLDFGTGLDGRWDIEWRFVACPGEEVSFKVVEMTPYYWKIQPRGTATPVESLTIGGRAAARTDDNHFELEHPSGNPWYEPQMVVT 516
BLAST of mRNA_L-elsbetiae_contig17829.5081.1 vs. uniprot
Match: A0A2V3ISL2_9FLOR (Expansin-YoaJ n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISL2_9FLOR) HSP 1 Score: 173 bits (439), Expect = 7.410e-51 Identity = 76/145 (52.41%), Postives = 100/145 (68.97%), Query Frame = 2 Query: 80 VPQQYDGMIPVALNNVQYGDSLMCGACIEGTASGNGSGNTPIPSTFKAFVTDKCPECDEGDLDFSMSGDGRWGIEWKFVECPGEDLSFVSPSANPYYMKVQPRGTKTPVETLTIAGQTATRMQDNHFVVQNNSGSAWPGTQSITT 514 +P Y+GM+PVA+NN QY +S CGAC++ T G GSG PI TFKA+V D+CPEC GD+D S GDGRW + WKF+ CPGE + F+ +N YY+K+QPRG KTPV L++ GQ T+ QDN ++VQN G +P T + T Sbjct: 50 MPSMYNGMLPVAINNAQYENSASCGACLQVTGYGQGSGANPIRGTFKAYVHDRCPECKYGDIDLSKGGDGRWRVHWKFIPCPGEFVFFLFEGSNRYYLKLQPRGLKTPVSALSVGGQWGTKTQDNFYIVQNGGGFRFPITVQMRT 194
BLAST of mRNA_L-elsbetiae_contig17829.5081.1 vs. uniprot
Match: F2Z7J0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis andersonii TaxID=408198 RepID=F2Z7J0_9FLOR) HSP 1 Score: 166 bits (419), Expect = 7.170e-48 Identity = 72/145 (49.66%), Postives = 99/145 (68.28%), Query Frame = 2 Query: 80 VPQQYDGMIPVALNNVQYGDSLMCGACIEGTASGNGSGNTPIPSTFKAFVTDKCPECDEGDLDFSMSGDGRWGIEWKFVECPGEDLSFVSPSANPYYMKVQPRGTKTPVETLTIAGQTATRMQDNHFVVQNNSGSAWPGTQSITT 514 +P Y GM+PVA+NN QY +S CGAC+ T G GSG P+ TFKA+V D+CPEC GD+D S SGDGRW ++W+F+ CPGE + F+ +N +Y+K+QPRG KTPV ++ GQ T+ QDN +++QN G +P T + T Sbjct: 45 LPGMYSGMVPVAINNAQYEESKSCGACLLVTGYGQGSGANPVVGTFKAYVHDRCPECKYGDIDLSKSGDGRWKVQWRFIPCPGEWVFFLFEGSNRFYLKLQPRGLKTPVTYFSVNGQQGTKTQDNFYILQNGGGFRYPLTVQMRT 189
BLAST of mRNA_L-elsbetiae_contig17829.5081.1 vs. uniprot
Match: D8LHU1_ECTSI (Putative lipoprotein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHU1_ECTSI) HSP 1 Score: 162 bits (411), Expect = 1.950e-47 Identity = 77/146 (52.74%), Postives = 97/146 (66.44%), Query Frame = 2 Query: 80 VPQQYDGMIPVALNNVQYGDSLMCGACIEGTASGNGSGNTPIPSTFKAFVTDKCPECDEGDLDFSMSGDGRWGIEWKFVECPG-EDLSFVSPSANPYYMKVQPRGTKTPVETLTIAGQTATRMQDNHFVVQNNSGSAWPGTQSITT 514 +P+ YDGMIPVALN+ QY DS MCGACIEG G G G P+ FKA+VTD+CPEC GDLDF+ GDGRW I W FV C G D +F+ +N +Y K+QPRG ++PVE L I G A R +DN F+++ G + G Q + T Sbjct: 64 LPEMYDGMIPVALNDEQYADSYMCGACIEGEGFGEGEGRDPVEGAFKAYVTDRCPECLFGDLDFAADGDGRWDISWHFVPCEGGSDQTFLFEGSNEFYWKIQPRGGRSPVERLWINGDEAERSEDNFFILE---GGPFDGEQEVHT 206
BLAST of mRNA_L-elsbetiae_contig17829.5081.1 vs. uniprot
Match: A0A1S3HSP2_LINUN (uncharacterized protein LOC106157840 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3HSP2_LINUN) HSP 1 Score: 96.7 bits (239), Expect = 2.020e-21 Identity = 43/104 (41.35%), Postives = 65/104 (62.50%), Query Frame = 2 Query: 113 ALNNVQYGDSLMCGACIEGTASGNGSGNTPIPSTFKAFVTDKCPECDEGDLDFSMSGDGRWGIEWKFVECPGED-LSFVSPSANPYYMKVQPRGTKTPVETLTI 421 A+N Q+ SL CG C+ T SG G G P+ T+ +VTD CP C +GD+DF++ GDGRW I++ V CP D +S+ ++P+Y+K+Q T+ PV + + Sbjct: 72 AINIEQFTGSLTCGICLRVTGSGQGLGLNPLTGTYLVYVTDLCPSCKQGDVDFALVGDGRWNIDFTAVPCPFNDNVSYRFQDSSPWYIKIQVGNTRLPVTGMAL 175
BLAST of mRNA_L-elsbetiae_contig17829.5081.1 vs. uniprot
Match: A0A225V8U2_9STRA (Expansin-like EG45 domain-containing protein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V8U2_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 1.330e-11 Identity = 42/130 (32.31%), Postives = 68/130 (52.31%), Query Frame = 2 Query: 113 ALNNVQYGDSLMCGACIEGTASGNGSGNTPIPSTFKAFVTDKCPECDEGDLDFSM--------SGDGRWGIEWKFVECP-GEDLSFVSPS-ANPYYMKVQPRGTKTPVETLTIAGQTATRMQDNHFVVQN 472 ALN+ Q+ +L CG C E + +T ST ++ D+CPEC EGDLD S S R+ I+WKFV CP ++++ + S ++ +++ VQP V ++ IA Q T + ++ + N Sbjct: 54 ALNSAQWDSTLNCGRCAEVSCDDARCSDTT--STQIVYLVDRCPECQEGDLDLSPKVFKQLTGSDPSRYSIKWKFVNCPVNGNINYCTKSGSSSHWLAVQPANFANGVASMKIANQDLTMVDSCYYFLLN 181
BLAST of mRNA_L-elsbetiae_contig17829.5081.1 vs. uniprot
Match: A0A2P4X936_9STRA (Carbohydrate-binding protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X936_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 3.760e-11 Identity = 42/130 (32.31%), Postives = 68/130 (52.31%), Query Frame = 2 Query: 113 ALNNVQYGDSLMCGACIEGTASGNGSGNTPIPSTFKAFVTDKCPECDEGDLDFSM--------SGDGRWGIEWKFVECP-GEDLSFVSPS-ANPYYMKVQPRGTKTPVETLTIAGQTATRMQDNHFVVQN 472 ALN+ Q+ +L CG C E + + +T ST ++ D+CPEC EGDLD S S R+ I+WKFV CP ++ + + S ++ +++ VQP V ++ IA Q T + ++ + N Sbjct: 46 ALNSAQWDSTLNCGRCAEVSCDDSRCSDTT--STQIVYLVDRCPECQEGDLDLSPTVFKTLTGSDPSRYSIKWKFVNCPVSGNIEYCTKSGSSSHWLAVQPANFANGVASMKIANQDLTMVDSCYYFLLN 173
BLAST of mRNA_L-elsbetiae_contig17829.5081.1 vs. uniprot
Match: A0A2P4YLN2_9STRA (Carbohydrate-binding protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YLN2_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 3.800e-11 Identity = 45/134 (33.58%), Postives = 70/134 (52.24%), Query Frame = 2 Query: 113 ALNNVQYGDSLMCGACIEGTASGNGSGNTPIPSTFKAFVTDKCPECDEGDLDFSM--------SGDGRWGIEWKFVECP-GEDLSFVSPS-ANPYYMKVQPRGTKTPVETLTIAGQTATRMQD-NHFVVQNNSG 481 AL++ Q+ +L CG C E + + +T ST + DKCPEC EGDLD S S R+ I+WKFV+CP ++ + + S ++ +++ VQP V +L IA Q T + +F++ SG Sbjct: 54 ALSSAQWDSTLNCGRCAEVSCDDSRCSDTT--STQIVYFVDKCPECQEGDLDLSPTVFKTLTGSDPSRYNIKWKFVDCPVSGNIEYCTKSGSSSHWLAVQPANFANGVASLKIANQDVTMVDSCYYFLLDGGSG 185 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17829.5081.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig17829.5081.1 >prot_L-elsbetiae_contig17829.5081.1 ID=prot_L-elsbetiae_contig17829.5081.1|Name=mRNA_L-elsbetiae_contig17829.5081.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=171bp MEGSTAAMPPTMDSPLPATVPSLTMNVPQQYDGMIPVALNNVQYGDSLMCback to top mRNA from alignment at L-elsbetiae_contig17829:1410..2295+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig17829.5081.1 ID=mRNA_L-elsbetiae_contig17829.5081.1|Name=mRNA_L-elsbetiae_contig17829.5081.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=886bp|location=Sequence derived from alignment at L-elsbetiae_contig17829:1410..2295+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig17829:1410..2295+ >mRNA_L-elsbetiae_contig17829.5081.1 ID=mRNA_L-elsbetiae_contig17829.5081.1|Name=mRNA_L-elsbetiae_contig17829.5081.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1026bp|location=Sequence derived from alignment at L-elsbetiae_contig17829:1410..2295+ (Laminarionema elsbetiae ELsaHSoW15)back to top |