mRNA_L-elsbetiae_contig1781.5073.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1781.5073.1
Unique NamemRNA_L-elsbetiae_contig1781.5073.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig1781.5073.1 vs. uniprot
Match: A0A6H5JEX9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEX9_9PHAE)

HSP 1 Score: 368 bits (944), Expect = 9.320e-127
Identity = 185/194 (95.36%), Postives = 189/194 (97.42%), Query Frame = 1 
Query:    1 MSAFAEAPVMEAVAAVVAPPVPAAAAPVSSTVFVGNLSWGTTSEDLRNFMGSLGEVVSADVQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRPIHIRLDRKEVEASGGFPVFVGNLPWSTSDEDLQQIFAPYEPYDCHVKTNMAGRSRGFGILRFATPELGQRAITEMQNYQIDSRPIQVREDREIG 582
            MSAFAEAP ME VA+VVAPPV A AAPVSSTVFVGNLSWGTTSEDLR FMGSLGEVVSA+VQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRPIHIRLDRKEVEASGGFPVFVGNLPWST+DEDLQQIFAPYEPYDCHVKTNMAGRSRGFGILRFATPELGQRAI+EMQNYQIDSRPIQVREDREIG
Sbjct:    1 MSAFAEAPGMEGVASVVAPPVAAGAAPVSSTVFVGNLSWGTTSEDLRTFMGSLGEVVSAEVQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRPIHIRLDRKEVEASGGFPVFVGNLPWSTTDEDLQQIFAPYEPYDCHVKTNMAGRSRGFGILRFATPELGQRAISEMQNYQIDSRPIQVREDREIG 194
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BLAST of mRNA_L-elsbetiae_contig1781.5073.1 vs. uniprot
Match: D8LK87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK87_ECTSI)

HSP 1 Score: 347 bits (891), Expect = 1.530e-116
Identity = 224/258 (86.82%), Postives = 228/258 (88.37%), Query Frame = 1 
Query:   82 VSSTVFVGNLSWGTTSEDLRNFMGSLGEVVSADVQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRPIHIRLDRKEVEASGGFPVFVGNLPWSTSDEDLQQIFAPYEPYDCHVKTNMAGRSRGFGILRFATPELGQRAITEMQNYQIDSRPIQVREDREIGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDA------------CTVFVGNLAWGTTDDDLLATFQ 819
            VSSTVFVGNLSWGTTSEDLR FMGSLGEVVSA+VQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRPIHIRLDRKEVEASGGFPVFVGNLPWST+DEDLQQIFAPYEPYDCHVKTNMAGRSRGFGILRFATPELGQRAI+EMQNYQIDSRPIQVREDREIG GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            G+                FVGNLAWGTTDDDLLATFQ
Sbjct:   50 VSSTVFVGNLSWGTTSEDLRTFMGSLGEVVSAEVQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRPIHIRLDRKEVEASGGFPVFVGNLPWSTTDEDLQQIFAPYEPYDCHVKTNMAGRSRGFGILRFATPELGQRAISEMQNYQIDSRPIQVREDREIG-GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPCPGFGGKPRGGEKEEKLFXXXXXXXXXXFVGNLAWGTTDDDLLATFQ 306
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BLAST of mRNA_L-elsbetiae_contig1781.5073.1 vs. uniprot
Match: A0A835ZG94_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG94_9STRA)

HSP 1 Score: 260 bits (664), Expect = 4.420e-83
Identity = 145/242 (59.92%), Postives = 171/242 (70.66%), Query Frame = 1 
Query:   91 TVFVGNLSWGTTSEDLRNFMGSLGEVVSADVQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRPIHIRLDRKEVEASGGFPVFVGNLPWSTSDEDLQQIFAPYEPYDCHVKTNMAGRSRGFGILRFATPELGQRAITEMQNYQIDSRPIQVREDREIGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDACTVFVGNLAWGTTDDDLLATF 816
            TVFVGNL+W TT+++LR+FM S+G V+S+ VQ HADSGRSKGWGLV Y+    A AAIEQLNNA+LGGR +H+RLDR  ++ SGGF VFVGNLPWST+ EDLQ +FA ++PYD HVKTNMAGRSRGF ILRF+ PE GQ+AI  M  + ID RPIQVREDR++G G                      XXXXXXXXXXXXXX                 D CTVFVGNLAWGTT++DL+A F
Sbjct:    8 TVFVGNLAWNTTADELRDFMASVGTVLSSAVQCHADSGRSKGWGLVEYSTDGEAMAAIEQLNNAELGGRAVHVRLDRSNIDTSGGFAVFVGNLPWSTTTEDLQTLFAQFQPYDVHVKTNMAGRSRGFAILRFSAPEPGQQAIAAMNGFDIDGRPIQVREDRDVGGGAEMGRGTRRAAGRGAAEPRADAXXXXXXXXXXXXXXPHKQEAV----------DRCTVFVGNLAWGTTNEDLVAHF 239
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BLAST of mRNA_L-elsbetiae_contig1781.5073.1 vs. uniprot
Match: A0A835YWJ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWJ3_9STRA)

HSP 1 Score: 241 bits (615), Expect = 1.170e-75
Identity = 145/243 (59.67%), Postives = 164/243 (67.49%), Query Frame = 1 
Query:   91 TVFVGNLSWGTTSEDLRNFMGSLGEVVSADVQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRPIHIRLDRKEVEASGGFPVFVGNLPWSTSDEDLQQIFAPYEPYDCHVKTNMAGRSRGFGILRFATPELGQRAITEMQNYQIDSRPIQVREDREIGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDACTVFVGNLAWGTTDDDLLATFQ 819
            TVFVGNLSW TTSE+LR+FM S GE+VS++VQ HADSGRSKGWGLV Y+ P  A AAIE LNNADLGGR +H+R DR  +E SGGF VFVGNLPWS +D DL  +FA + P+D HVKTNM GRSRGFGILRF +PE G+ AI  M  ++I+ R IQVREDRE GE           XXXXXXXXXXXXXXXXX                            CTVFVGNLAW TT +DL   F 
Sbjct:    8 TVFVGNLSWNTTSEELRDFMASQGEIVSSEVQCHADSGRSKGWGLVQYSTPEEATAAIELLNNADLGGRSVHLRFDRTTIETSGGFAVFVGNLPWSVTDLDLTALFAKFNPFDAHVKTNMTGRSRGFGILRFHSPEEGREAIEAMNGFEIEGRHIQVREDRE-GE--------VRGXXXXXXXXXXXXXXXXXGAPAEGAATEAAHTSPAPAAAARKEPSGCTVFVGNLAWTTTTEDLTEHFS 241
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BLAST of mRNA_L-elsbetiae_contig1781.5073.1 vs. uniprot
Match: A0A7S2V6P6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6P6_9STRA)

HSP 1 Score: 212 bits (539), Expect = 3.270e-64
Identity = 131/242 (54.13%), Postives = 155/242 (64.05%), Query Frame = 1 
Query:   91 TVFVGNLSWGTTSEDLRNFMGSLGEVVSADVQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRPIHIRLDRKEVEASGGFPVFVGNLPWSTSDEDLQQIFAPYEPYDCHVKTNMAGRSRGFGILRFATPELGQRAITEMQNYQIDSRPIQVREDREIGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDACTVFVGNLAWGTTDDDLLATF 816
            TVFVGNL W TT+E+L+ FM   G VVSADVQ+HADSGRSKGWGLV Y+    A+ AI+ LN+  L  R IH+RLDR  ++ + G  VFVGNLPWST+ E L ++F  YEP+D HVKTNMAGRSRGF ILRF   +    AIT+M  Y ++ R IQVREDR + EG      XXXXXXXXXXXX       XXXXXXX                        T+FVGNLAW TTD +L+  F
Sbjct:    7 TVFVGNLKWSTTNEELQEFMSQCGNVVSADVQAHADSGRSKGWGLVEYSTAEEAQNAIQLLNSTTLQERQIHVRLDRSNLDETAGVSVFVGNLPWSTTSETLAELFGSYEPFDVHVKTNMAGRSRGFAILRFNNQDQANAAITDMNGYNLEERNIQVREDRGVAEGGPRGGSXXXXXXXXXXXXRGGAEDSXXXXXXXQGGARTPRNVEPSN----------TLFVGNLAWSTTDTELMEHF 238
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BLAST of mRNA_L-elsbetiae_contig1781.5073.1 vs. uniprot
Match: A0A6U4FSY9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4FSY9_9STRA)

HSP 1 Score: 193 bits (491), Expect = 1.560e-57
Identity = 84/163 (51.53%), Postives = 116/163 (71.17%), Query Frame = 1 
Query:   85 SSTVFVGNLSWGTTSEDLRNFMGSLGEVVSADVQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRPIHIRLDRKEVEASGGFPVFVGNLPWSTSDEDLQQIFAPYEPYDCHVKTNMAGRSRGFGILRFATPELGQRAITEMQNYQIDSRPIQVREDR 573
            ++ +++GNL+W TT E+L  F+GS+GEV++A VQ HADS RSKGWGL TYA P  A  A+ QL+ ++L GRP+H+R DR ++E  GG  +FVGN+PW  + E L + F P++P D HVKTNMAGRSRGF I +F   EL   A+ +M   ++  R +QVRED+
Sbjct:    3 NTDIYIGNLTWDTTDEELLEFLGSVGEVLNASVQRHADSQRSKGWGLATYAAPEGAALAVSQLDQSELKGRPVHVRFDRSKIENVGGVNIFVGNIPWEITSEQLYESFFPFQPIDVHVKTNMAGRSRGFAIAKFPNQELADAAVAQMNGKELQGRQLQVREDK 165
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BLAST of mRNA_L-elsbetiae_contig1781.5073.1 vs. uniprot
Match: A0A7S2DGC6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DGC6_9STRA)

HSP 1 Score: 193 bits (491), Expect = 9.200e-57
Identity = 88/164 (53.66%), Postives = 114/164 (69.51%), Query Frame = 1 
Query:   91 TVFVGNLSWGTTSEDLRNFMGSLGEVVSADVQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRPIHIRLDRKEVEASGGFPVFVGNLPWSTSDEDLQQIFAPYEPYDCHVKTNMAGRSRGFGILRFATPELGQRAITEMQNYQIDSRPIQVREDREIG 582
            T+FVGNLSW TT+E+L  FM + G V S  VQ+HAD+GRSKGW LVTY         I+Q N  +  GR +++R DR ++E   GFPVFVGNLPWST+ EDL  +F  + P+D HVKT MAGRSRGF ILRF + E+ Q+A   M  ++++ R I+VREDR+ G
Sbjct:   35 TLFVGNLSWATTNEELSEFMANYGTVASCQVQAHADTGRSKGWALVTYTTAEECTYTIQQTNGQEFNGRNLNVRQDRSQMEELSGFPVFVGNLPWSTTSEDLSDLFRDFGPFDVHVKTTMAGRSRGFAILRFESLEVAQQATAAMNGHELEGRSIEVREDRQTG 198
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BLAST of mRNA_L-elsbetiae_contig1781.5073.1 vs. uniprot
Match: A0A7S2GAK8_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GAK8_9STRA)

HSP 1 Score: 189 bits (479), Expect = 3.030e-55
Identity = 88/167 (52.69%), Postives = 118/167 (70.66%), Query Frame = 1 
Query:   79 PVSSTVFVGNLSWGTTSEDLRNFMGSLGEVVSADVQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRPIHIRLDRKEVEASGGFPVFVGNLPWSTSDEDLQQIFAPYEPYDCHVKTNMAGRSRGFGILRFATPELGQRAITEMQNYQIDSRPIQVREDREI 579
            P ++T+FVGNL+W TTSEDL+ +  ++G V+S +VQSHAD+GRSKGW LVTY+    A  AI QL+  D   RP+++R+DR  VE  GG  VFVGNLPWST++E L ++F  + P+D +VKT M GRSRGF I+RF TPE  + AI  MQ +  + R + VR DR +
Sbjct:   20 PSTATLFVGNLAWSTTSEDLKKYCAAVGNVLSVEVQSHADTGRSKGWALVTYSTSEEAAVAITQLHGHDFNDRPLNVRVDRSNVEQMGGTLVFVGNLPWSTTNEQLLELFGQFNPFDVNVKTTMNGRSRGFAIVRFDTPERAEVAIGTMQGFIFEGRTLDVRIDRPL 186
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BLAST of mRNA_L-elsbetiae_contig1781.5073.1 vs. uniprot
Match: K8YWK2_NANGC (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YWK2_NANGC)

HSP 1 Score: 181 bits (458), Expect = 6.390e-53
Identity = 84/164 (51.22%), Postives = 112/164 (68.29%), Query Frame = 1 
Query:   82 VSSTVFVGNLSWGTTSEDLRNFMGSLGEVVSADVQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRPIHIRLDRKEVEASGGFPVFVGNLPWSTSDEDLQQIFAPYEPYDCHVKTNMAGRSRGFGILRFATPELGQRAITEMQNYQIDSRPIQVREDR 573
            +S TVFVGNLSWGTT++ L   M + G V+  +VQ+H+D+GRSKGW LVT+     A  A+E L   ++ GRP+++R DR E+E   GF VFVGNLPW  +   L+ +F+ + PYD H+KTNM+GRSRGFG+LRF + E  QRAI +M    +  R I VR DR
Sbjct:    1 MSKTVFVGNLSWGTTADSLTAIMETAGRVLGVEVQAHSDTGRSKGWALVTFETAEDASRAMELLCGREVEGRPLYVREDRTEIEKEEGFVVFVGNLPWDMTASGLRTVFSEFSPYDVHIKTNMSGRSRGFGLLRFRSSEEAQRAIEQMHGITVQERKILVRLDR 164
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BLAST of mRNA_L-elsbetiae_contig1781.5073.1 vs. uniprot
Match: A0A4D9CR95_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CR95_9STRA)

HSP 1 Score: 152 bits (383), Expect = 2.390e-40
Identity = 70/142 (49.30%), Postives = 95/142 (66.90%), Query Frame = 1 
Query:  148 MGSLGEVVSADVQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRPIHIRLDRKEVEASGGFPVFVGNLPWSTSDEDLQQIFAPYEPYDCHVKTNMAGRSRGFGILRFATPELGQRAITEMQNYQIDSRPIQVREDR 573
            M + G V+  +VQ+H+D+GRSKGW LVT+     A  A+E L   ++ GRP+++R DR E+E   GF VFVGNLPW  +   L+ +F+ + PYD H+KTNM+GRSRGFG+LRF + E  QRAI +M    +  R I VR DR
Sbjct:    1 METAGRVLDVEVQAHSDTGRSKGWALVTFEAAEDASRAMELLCGREVEGRPLYVREDRTEIEKEEGFVVFVGNLPWDMTASGLRTVFSEFRPYDVHIKTNMSGRSRGFGLLRFRSSEEAQRAIEQMHGITVQERKILVRLDR 142
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1781.5073.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEX9_9PHAE9.320e-12795.36Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LK87_ECTSI1.530e-11686.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZG94_9STRA4.420e-8359.92Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YWJ3_9STRA1.170e-7559.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V6P6_9STRA3.270e-6454.13Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6U4FSY9_9STRA1.560e-5751.53Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2DGC6_9STRA9.200e-5753.66Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2GAK8_9STRA3.030e-5552.69Hypothetical protein n=2 Tax=Florenciella parvula ... [more]
K8YWK2_NANGC6.390e-5351.22Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A4D9CR95_9STRA2.390e-4049.30Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1781contigL-elsbetiae_contig1781:16382..23218 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score344.7
Seed ortholog evalue3.8e-92
Seed eggNOG ortholog2880.D8LK87
KEGG koko:K11294,ko:K12891
KEGG Pathwayko03040,ko05130,ko05168,map03040,map05130,map05168
Hectar predicted targeting categoryother localisation
EggNOG free text desc.RNA binding
EggNOG OGsKOG0123@1,KOG0123@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03009,ko03036,ko03041
Exons6
Model size819
Cds size819
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1781.5073.1prot_L-elsbetiae_contig1781.5073.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1781 16382..23218 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815742.5455499-CDS-L-elsbetiae_contig1781:16381..164151622815742.5455499-CDS-L-elsbetiae_contig1781:16381..16415Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1781 16382..16415 +
1691683073.3758395-CDS-L-elsbetiae_contig1781:16381..164151691683073.3758395-CDS-L-elsbetiae_contig1781:16381..16415Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1781 16382..16415 +
1622815742.5565324-CDS-L-elsbetiae_contig1781:18794..189811622815742.5565324-CDS-L-elsbetiae_contig1781:18794..18981Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1781 18795..18981 +
1691683073.3956382-CDS-L-elsbetiae_contig1781:18794..189811691683073.3956382-CDS-L-elsbetiae_contig1781:18794..18981Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1781 18795..18981 +
1622815742.5689375-CDS-L-elsbetiae_contig1781:20349..204801622815742.5689375-CDS-L-elsbetiae_contig1781:20349..20480Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1781 20350..20480 +
1691683073.4063206-CDS-L-elsbetiae_contig1781:20349..204801691683073.4063206-CDS-L-elsbetiae_contig1781:20349..20480Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1781 20350..20480 +
1622815742.5790732-CDS-L-elsbetiae_contig1781:21219..213491622815742.5790732-CDS-L-elsbetiae_contig1781:21219..21349Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1781 21220..21349 +
1691683073.414655-CDS-L-elsbetiae_contig1781:21219..213491691683073.414655-CDS-L-elsbetiae_contig1781:21219..21349Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1781 21220..21349 +
1622815742.5913455-CDS-L-elsbetiae_contig1781:21906..219821622815742.5913455-CDS-L-elsbetiae_contig1781:21906..21982Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1781 21907..21982 +
1691683073.4227645-CDS-L-elsbetiae_contig1781:21906..219821691683073.4227645-CDS-L-elsbetiae_contig1781:21906..21982Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1781 21907..21982 +
1622815742.601209-CDS-L-elsbetiae_contig1781:22957..232181622815742.601209-CDS-L-elsbetiae_contig1781:22957..23218Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1781 22958..23218 +
1691683073.4317818-CDS-L-elsbetiae_contig1781:22957..232181691683073.4317818-CDS-L-elsbetiae_contig1781:22957..23218Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1781 22958..23218 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1781.5073.1

>prot_L-elsbetiae_contig1781.5073.1 ID=prot_L-elsbetiae_contig1781.5073.1|Name=mRNA_L-elsbetiae_contig1781.5073.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=273bp
MSAFAEAPVMEAVAAVVAPPVPAAAAPVSSTVFVGNLSWGTTSEDLRNFM
GSLGEVVSADVQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRP
IHIRLDRKEVEASGGFPVFVGNLPWSTSDEDLQQIFAPYEPYDCHVKTNM
AGRSRGFGILRFATPELGQRAITEMQNYQIDSRPIQVREDREIGEGGGGG
GGGGGGGGRRGRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGD
ACTVFVGNLAWGTTDDDLLATFQ
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mRNA from alignment at L-elsbetiae_contig1781:16382..23218+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1781.5073.1 ID=mRNA_L-elsbetiae_contig1781.5073.1|Name=mRNA_L-elsbetiae_contig1781.5073.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6837bp|location=Sequence derived from alignment at L-elsbetiae_contig1781:16382..23218+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCTGCCTTCGCGGAAGCTCCTGTGATGGAAGGTGGGGGGTTGTCGAG
GCTTTGGGGGGAGAGGGGAGGAAAAGGATGCGGCACATGTTCGCGCGGCG
TAGCATGATGATTGAGAGGAAAAGCCTCTCCCTCGAAGCAGAGCCTTTGC
TGGTATGCCACACCCTGAAGCCTGCGAAATGCCCTTCTCGAAGTATTTTC
CCATAGTGCACAGAATCGTGTCCAAGCCTGCTGCCTGCTAGGAGTTGGTC
TGTCGCACAGTGCGCTCGAGAGGGGAGAACAGGAGTGTGTCGGTGTGGAA
ATTAGGGCCAAGAGGCTTTTTTGCAAATTCGAACACTCCTGCACTACTGC
AACGCACGCGCGAGCTGAAGTTGGCTGTGGAGCCCCTCCCTCATTCCCGG
CCTGTCTAAGAGTCTTAAACTCGTGCCTGGATGTGGGCGGGGGGGAGGGA
GCGATGTGTATTGTGTTGGGGGTCGGGGGCGGGTGTGCGGGCGGTAACTG
GTGCTCATATTTCACACCTTTTTTTGTTGAGGTTTGTGCGTACGTTTTCG
TAGAGGCAGCATGCAACACCCTTTCGGCCCCAGCGCTCCTGCAGAGTGTT
TCGAGTGTCGGTGGCCGTTTTTCCTGGCCCCGGCATGTCGTGTCATCCTA
GGTTGGAGGTGGACGGGGCTGTGGGGTTTGTTTGCTCAACTGGCTGCTTG
ATCGCACGAAACTTTGCGCGAAAAAAAAACAAGCCTGGTTCCCCTCGCTC
GTTTCACAGGCACAAGACACACCCGTTTTTTTGGGCCGAGCATTTTTTTG
ATTATGTGGGTGTCATGCACATCTTACTGTTGCACCGAGCGGCCATTGTG
TGATCGCACCCCAACTGATGATTGATCATGTGTGCTGGGTTCATATGATG
TTGAGCGTGTTCGTTTCGTGGTGATGTTGTCTTGCGTCGTCCTGTCGCAA
AATGATTGAATGCAGGCCATTTTCATTTTGTTTTTTGCAAATTTACAGTC
ATATATGTGGAAAATGCAAAAAAACAAAATAAAAAGTCGACTTTTTAAAA
AAACATTGGACGGCCGTGGGTGGCTGGTCTGGAGAGGCGGGTGGTTGTCA
CCGTCGCAGCACGCGCCTCTAGTGTGCATCGCCCATGTTTTTGCGGGCTT
GCGTCTTTGGGGTGCGGGGGTGAGGGTGGAAGCACATCATGTAGTACATA
CGCACATGCATTTCCTCCTACAACACAATTATGCTGTACATAAGTAATTA
CGCCCAAAATTGAAATTTCGAGACTTTTGGACTGATCCGAGTTTGAAAGT
CCAGATCTCTTTCCGACAAGAATTATTAGCAGCGCCCGGTTTTCGGAGTG
ATCATACATGATCTCCGTGTGTACTAACACACGTACTTACAACAAACAAG
ACTCCCTTTTTTCAGACTTTGCTCACGGGTGAACAAACACTGGGGCGAAG
CAAGAGAGCAAACCAAGCGTCCGATACCTGTGCATTCTGCCGACTTTTGA
GCTTGGAGCGTCTTCAACGATTTTGCAATGGTTGAGCACTGGGGGAGGGA
CCAGGGACCAGAAGGCCCGCCAAAAATTGTTGCGCCGGCTTCCGCGTGTG
TCTGTGTGCGGTTGTCGTCGCCAGAAAATTACACAAAAACAGCACGATAA
GAACAGCTTAACAGCTGTCAAGAACCTGATCACTTGTTGACTGCTGTTCG
AGTTGCGCAGCGTTATATGAGAGTGGCTGAGGGAAGTGTCGGCTGTCACC
CTTAAATCGTCATAACCCGTTTACTGTCGCCACGTGCGTGGCTTGCAACC
AACAGCCCACAGATCCAGCTCCTAGAGACAGCGCTCGGAACAGCGAGCGA
GAACGACCACGCGTGCCATCTCAACCTTACAGGAAAACTGCTGTCCTTGC
TTTCCGAGGTGGTCGAGATAGTAAGCGAAGAGCTATGTATCGGGTGGGGA
GCTGTGTGTTTGCGGCGCCGAGAAAAAAATGCTGGGTTTGCAGGAAAGAA
AAGAGGCTGAAAAACTGACGTTCGTACATAACAGCAGCTGTTGAAGCGGA
TGTATATTTATCCACAAAAGGCTGATGTTGAGAAACACGAAATTTAAAGT
TACACCTCGGGACGGTCTATCTAGCGGTTATTTCTGAGCGCTAAAATTGT
ACCGTCTTGTTTTCACCCCCCCCCCCCGCCCCACGTTTTTCCGTCCACTT
TTTTCCGTCCGCCGCTGCTGCCCCCCCCTCCTCCCGCCCTGAAAACGCCG
CACCCCGAAACACCTTTGATATTTTCGCCAAAATCGGAAATAAATCAGCA
CCGCCCTTAACCGGTCCCATGCGCTGCCCTGCCCTGCCCTGCCGTTCCGA
CGGACAAATCGCTTTTTTTTTCTCCTTCGCTGCGCAATGATTAATGCATC
CATGATGCAGCAGCGGTAGCAGCAGTTGTGGCGCCCCCGGTCCCCGCCGC
TGCGGCCCCCGTGAGCAGCACGGTGTTCGTCGGCAACCTGTCGTGGGGCA
CCACCAGCGAGGACCTGCGCAACTTCATGGGCTCCCTGGGAGAGGTGGTG
TCCGCCGACGTGCAGAGCCACGCCGACTCGGGTCGCTCCAAGGGGTGGGG
GTGAGTGTGCGAGTGTAGATGTGCGCATGCCTGCATACAAGTGGGCAGGC
GCGAAGGCAGTAAGAGCAGAACCAGTAGCGGCGGCGGTGGTGGTGGCGGC
GGCGGCGGCGGCGGAGGCGGAGGCACTCGTTTGCAGCTGGGTTGTTTTTC
TTCCGACTTGTCGTGTGCGGGCGGGCTGCCTGCGTAGCTCTCTTCCCGCC
GCCGCCGCCGCCGCCGCCGCCAGCCCCGCCGGCGATGAATCTCGACACTA
TAAGCTCGTCTCTCGCCCCCTGTACAGAAGGCAGGAATCCCGACCAAAAT
AAAAATGTTTCCTGCCCTGGGGCTGCGTGTCGGGGACGGCGTCTTTCGGT
TTCCGGTCTCGCTGCTCCATCGTGTTTTCGATTTTGGCTGCTCGGCCCAT
GGGGGGGGGGGGGGGGGAGATATGGTAGTACGTTTTACTTCTAGTAGATA
GGTTTGTCCGAAAAGGTGAGAAACACAGATCAAGTTCTCCCGAGCAGTAT
GCACATTTCTCTAATAGTACCCAACACTTGTAAGTATATAAATAAACCTC
TCTCTGTATATCGTGGGAGGGATTTGGCCTGGCATGGCGACAACTAGAGA
GAAGCGGATAGAAATGCCCCCCTCCTCCATCCTTCCGAGGGCTTGAATGA
AAGCTGGAGCAACCGCCATGTGTCCCCAACTCTTACAGAAAGGGGCTAAG
GTTCCTGTCCCTCTCCGCCCTTTCCTTTCCGGGGGGGGGGGGGGGGGGCA
AGGTTCAAGGGGGGTGGAGGGGGGGGCCCCCCAAAGGGGAGGGGGGGGGG
CAGGGGGGGGGGGGGCAAAAAGCACCGTNNNNNNNNNNGCTGCTCTTATC
CGGTTTTCAAGTCGAAGGGGATCGAGGATGGGTTGGGCCGGCCCCTTTTT
CTTCTTGCCGGGTGGGGGGGGGGGGGGGGGGGGGGGGGTCAAGGTTCAAG
GCGGTTGAAGGGCGGCTCATCCAAAGGGCAAGGGCGTGGACATGGCGCGG
GAGGTCAAAAAGCACCGTCCGTACCCGCCCGTAGTCTGATGGCTTTGGTT
CGTTGCTGTCTCTGCTGTATTATCTTGTTGTTGTTGTTGTTGTTGTTGTT
GTTGTTGTTGTTGTTGTTGTTTTCTTCACGTTGAAAACCGTTCCGATCTC
TCCATCCAGTACCTCCGTACGTCCGTAGTCCGTAGCAGTCAAAGACCCGA
CGCGGTCGATTCTTGTGTCTTTATTTTGGCGGCTATTCTTGGTTTTCCGT
CGCCCATGGTGTGTGCTTTTGGTTGTGTCCTGTGCTGTGCTTTCATCTCA
TTCTGGCGGGTTCTCTTTTTGGCCGCGCTGTGTCTGCTCCGTCTCTCTTC
CTGCTGCTTGCTGCCCAGGCTTGTGACGTACGCCGACCCAGCCATCGCGG
AGGCTGCGATCGAGCAGCTCAACAACGCCGACCTGGGCGGGCGGCCCATC
CACATCCGACTCGACCGGAAAGAGGTGGAGGCAAGCGGCGGCTTTCCTGG
TGAGGGTTTGTTTTTTACGGCAGTATGTTAGTATCCTAGCCTTGACGTGT
TTGCGGCCTAGCCTTTTTCGTCCTCTACGGTGCGGCAAGCGTGAGGCCTT
TTTTTTCTTTTTTCTTTTTTCTCGCGGCGAGAAATGTTCACGGCTGCTGG
TGCTGCTGCGTGATTTGAGGCAGCGGTGCCCCCCCCCCCACTCTGCCCAC
CTGTCTCTGCCCCTGTGGCCGTGCGTGCGCGCGCCAGCAGCGACATAAAG
AACCAAGCCTCTTGTGTCCAACGTTTACCTATCCCCCGCCACTATTGTGT
CTGTGTACCCACCTCTGCACCGGCCCCGTTGGGCACGGCACGGGGGCAGC
GCTTGTTGTGCTAACTACTGTTGTTGTCCCCCCGGAATGCACAGCGGCTG
CTGTTGACCCCTCTTTCAACCAAGCTCTGCTATCCTTGCTGTGTTTATGT
ACATTTCGCGTGAATACATGCCTCCATAGATCCCGCTCCGTAAAACAGCA
GTGTAGGATTGAGAATGTAGACGAGCGACAGCAGTATTCAGCTGGAAGAG
AGAGACCCTCATCCCCTCGAGCCCGCCCGCCCTCTCGCCTGCGCTCGCTG
CCGTTCCTCCACAAAATGACGACTCGCACGTCGCTCTACACCGGACGGCG
ACATCGGCAACGATGATGATGGACCAACGCAACAACAAACAACAACGACG
ATCTGTCTTGTCTGTGTATCGATCGGCCGATGGCGCAGTCTTCGTGGGCA
ACCTTCCGTGGTCCACGTCCGACGAGGACCTGCAGCAGATCTTCGCACCT
TACGAGCCGTATGACTGCCACGTCAAGACCAATATGGCGGGCCGCAGCAG
AGGTTTCGGGATCCTCAGGTGTGTGATTTAGACCACGCACGTATGTCCTT
GGAAGTTCTGCGGAGTAGATTGCTGGTTCTGAATTCTTCTTTGAAACGAT
CAAAATAATAACGCGTGTATGATTGCGCGGTGGTCCTATCGTATGTCTTT
AGCAGACAGGAGATGCTCGCCCGACCCCCCCTTGACCCCCCACCCCCCCC
CCCTACTCGATTATTTTCTGTCATACATACGCCAGCAAAAGGGTTTTGCG
CGAACTCGAAAGTCGAACAAGCCGCGAACAAAGCGTTTGTTGACACGCGA
GACTAAACTGAAATACACTAAACTGGTACTGCTACTTGCATACATGTGCT
TACCCCGTTCATCTAAACAGCATACGAGTAAGAATACTTGGCGACAGAGA
GAAGAGAGAGAGATGTGCAAACGTATCATGAACGCGAAGGTAAACAATGT
TCACTGGATGTTCAGCCAATATATCAAGTGCGTTGGTGGTTCATGGACCC
CAGAGTGCCCGAAAGGGACCTATAGCATACTTTGTTTGTCGCATCTACAC
ACATTTGTTTTTTGGCTGCCCCCAGGTTTGCCACCCCAGAGCTAGGCCAG
CGAGCGATCACGGAGATGCAGAACTACCAGATCGACAGCCGTCCCATCCA
GGTGTTTACCTTATTTCGTCGTACTGTGCTTTGCTTGGCTACGTGTTATG
TACCTTATTTCGAAAGCGAGCGATCACGGAGATGTAGAACTACCAGATCG
ACAACTGTCCCATCCAGTTGTGTACCTTATTTCCTCGTGCTGTGCCGTTC
CATCCAGGTGTGTACCTTATTTCGTCGTGCTGTGCTTTGCTTGGCTACAT
GTACGTACTGTACCTTTTTTCGGAAGAAAAAACAGTAAATCAAAACCGGA
ACCTAACCCCCACATTTGAGATGAGGTTCCGTGGGGTTTAGCCGAGTAGA
AAAACACCCCCCCAAGATGCCCGAAGAGTTGCAACATCTTCCCTGCAAAG
CTCTGCCAGGTCAACGAACATCTTTTATTTTGTACAGCGTCGACACGATC
AGTCTTTCGTAGTCGCGTGTAAAAACACAGCAGTGTTTGGAGAACTAATT
GCGACGAGATGCGTACAGTAGGTCAGCTTTCGTCAGGCCACGCAGGCGGA
GCAGACAAAAAAACATACCCACGTACGATGCATGCACCTGCCTAGTGTAC
CTGCCTGCCTGCCTGCCTCACCAGGTCAACTGGTGGTGGATGTGATTTAT
GATTTAAGACTTGCCCGGAAGCGTCGTGAAGTTGCATCGTATCGACGTAC
CGGACTGCATATGCATGCCGCAGCTCGCACCCACTGCGTTTTGTTTTGTC
GGGGACGAACACGCCGGGGGCGTCGTGCTTGTGAGGTTTTATTTACAACC
AACAGTGTGCGTCTCTCTGTACGTCATACCACATACATACATATATACAT
TCATATGTACCAGAATATCGAAATCGACCTACCTTTGTTGTGCGGAGGTG
CAGGCATGGGTGAACAAGCTTCAGCCCGTCTTGCCTGTTGCTGAAAAGAG
ATTCCTCCTGTCGCAACCCGGCGGCTTCCTGACACACTTTCTGCAACTCT
CTGGCCTGTTGTCTGTTGTCTGTCAGGTCCGTGAAGACCGCGAGATCGGC
GAAGGCGGTGGTGGCGGCGGCGGCGGTGGCGGAGGTGGCGGCCGCCGTGG
CCGCGGGGGAGGGGGAGGGGGGGGAGGAGGAGGCGGCGGTGGTGGCGGCG
GCGGCGGGGGCGGCGGCGGCGGCGGGGGCGGCGGCGGCGGCGGCGGCGGG
GGGGACGGCGGCGGAGACGCGTGCACGGTGTTTGTGGGCAACCTGGCGTG
GGGAACGACGGACGACGACCTTCTTGCTACGTTTCAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1781:16382..23218+

>mRNA_L-elsbetiae_contig1781.5073.1 ID=mRNA_L-elsbetiae_contig1781.5073.1|Name=mRNA_L-elsbetiae_contig1781.5073.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1638bp|location=Sequence derived from alignment at L-elsbetiae_contig1781:16382..23218+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCTGCCTTCGCGGAAGCTCCTGTGATGGAAGATGTCTGCCTTCGCGG
AAGCTCCTGTGATGGAAGCGGTAGCAGCAGTTGTGGCGCCCCCGGTCCCC
GCCGCTGCGGCCCCCGTGAGCAGCACGGTGTTCGTCGGCAACCTGTCGTG
GGGCACCACCAGCGAGGACCTGCGCAACTTCATGGGCTCCCTGGGAGAGG
TGGTGTCCGCCGACGTGCAGAGCCACGCCGACTCGGGTCGCTCCAAGGGG
TGGGGCGGTAGCAGCAGTTGTGGCGCCCCCGGTCCCCGCCGCTGCGGCCC
CCGTGAGCAGCACGGTGTTCGTCGGCAACCTGTCGTGGGGCACCACCAGC
GAGGACCTGCGCAACTTCATGGGCTCCCTGGGAGAGGTGGTGTCCGCCGA
CGTGCAGAGCCACGCCGACTCGGGTCGCTCCAAGGGGTGGGGGCTTGTGA
CGTACGCCGACCCAGCCATCGCGGAGGCTGCGATCGAGCAGCTCAACAAC
GCCGACCTGGGCGGGCGGCCCATCCACATCCGACTCGACCGGAAAGAGGT
GGAGGCAAGCGGCGGCTTTCCTGGCTTGTGACGTACGCCGACCCAGCCAT
CGCGGAGGCTGCGATCGAGCAGCTCAACAACGCCGACCTGGGCGGGCGGC
CCATCCACATCCGACTCGACCGGAAAGAGGTGGAGGCAAGCGGCGGCTTT
CCTGTCTTCGTGGGCAACCTTCCGTGGTCCACGTCCGACGAGGACCTGCA
GCAGATCTTCGCACCTTACGAGCCGTATGACTGCCACGTCAAGACCAATA
TGGCGGGCCGCAGCAGAGGTTTCGGGATCCTCAGTCTTCGTGGGCAACCT
TCCGTGGTCCACGTCCGACGAGGACCTGCAGCAGATCTTCGCACCTTACG
AGCCGTATGACTGCCACGTCAAGACCAATATGGCGGGCCGCAGCAGAGGT
TTCGGGATCCTCAGGTTTGCCACCCCAGAGCTAGGCCAGCGAGCGATCAC
GGAGATGCAGAACTACCAGATCGACAGCCGTCCCATCCAGGTTTGCCACC
CCAGAGCTAGGCCAGCGAGCGATCACGGAGATGCAGAACTACCAGATCGA
CAGCCGTCCCATCCAGGTCCGTGAAGACCGCGAGATCGGCGAAGGCGGTG
GTGGCGGCGGCGGCGGTGGCGGAGGTGGCGGCCGCCGTGGCCGCGGGGGA
GGGGGAGGGGGGGGAGGAGGAGGCGGCGGTGGTGGCGGCGGCGGCGGGGG
CGGCGGCGGCGGCGGGGGCGGCGGCGGCGGCGGCGGCGGGGGGGACGGCG
GCGGAGACGCGTGCACGGTGTTTGTGGGCAACCTGGCGTGGGGAACGACG
GACGACGACCTTCTTGCTACGTTTCAGGTCCGTGAAGACCGCGAGATCGG
CGAAGGCGGTGGTGGCGGCGGCGGCGGTGGCGGAGGTGGCGGCCGCCGTG
GCCGCGGGGGAGGGGGAGGGGGGGGAGGAGGAGGCGGCGGTGGTGGCGGC
GGCGGCGGGGGCGGCGGCGGCGGCGGGGGCGGCGGCGGCGGCGGCGGCGG
GGGGGACGGCGGCGGAGACGCGTGCACGGTGTTTGTGGGCAACCTGGCGT
GGGGAACGACGGACGACGACCTTCTTGCTACGTTTCAG
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