mRNA_L-elsbetiae_contig17610.4975.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig17610.4975.1 vs. uniprot
Match: A0A6H5LL14_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL14_9PHAE) HSP 1 Score: 329 bits (843), Expect = 1.690e-106 Identity = 167/208 (80.29%), Postives = 184/208 (88.46%), Query Frame = 1 Query: 1 IAQAAKSTPALVGYIARCFGEIPAKAIYEMDSGERQVIECKSGVQQGDGMGPPLFCFAILPTVSKLRVKYEPRGVRIEAYMDDI-NLYFKEITEDAIEVVPDLVDELEAVGIIVNRRKSSALPPPGHEVTPTERRLLQEIGLPIAEEGITVVGVPIGTDAYVEECAMKKITEGGAENLAHMLARMPDKQVAHLVTSQSLTQRSGYIER 621 +AQAAKS P LVGYIARC+ EIPAKAIY MDSGER+ IECKSGVQQGDGMGPPLFCF ++P V KLR KY+ GVR++AYMDDI +L+FK IT + I+V+PDLVDELEAVGIIVNR KSSALPPPGH+VTP ERRLL + GLPIAEEGITVVGVPIGTDAYVE+ AMK ITEGGA+ LA ML RMPDKQVAHLVTSQSLTQRSGYIER Sbjct: 156 MAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFTLVPIVLKLRAKYDNLGVRLKAYMDDIISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVEDIAMKVITEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGYIER 363
BLAST of mRNA_L-elsbetiae_contig17610.4975.1 vs. uniprot
Match: A0A6H5KYJ9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYJ9_9PHAE) HSP 1 Score: 329 bits (843), Expect = 4.580e-106 Identity = 165/207 (79.71%), Postives = 183/207 (88.41%), Query Frame = 1 Query: 1 IAQAAKSTPALVGYIARCFGEIPAKAIYEMDSGERQVIECKSGVQQGDGMGPPLFCFAILPTVSKLRVKYEPRGVRIEAYMDDINLYFKEITEDAIEVVPDLVDELEAVGIIVNRRKSSALPPPGHEVTPTERRLLQEIGLPIAEEGITVVGVPIGTDAYVEECAMKKITEGGAENLAHMLARMPDKQVAHLVTSQSLTQRSGYIER 621 +AQAAKS P LVGYIARC+ EIPAKAIY MDSGER+ IECKSGVQQGDGMGPPLFCF ++P V KLR KY+ GV ++AYMDDI+L+FK IT + I+V+PD+VDELEAVGIIVNR KSSALPPPGH+VTP ERRLL + GLPIAEEGITVVGVPIGTDAYVE+ AMK ITEGGA+ LA ML RMPDKQVAHLVTSQSLTQRSGYIER Sbjct: 72 MAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDVVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVEDIAMKVITEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGYIER 278
BLAST of mRNA_L-elsbetiae_contig17610.4975.1 vs. uniprot
Match: A0A6H5KKQ2_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ2_9PHAE) HSP 1 Score: 328 bits (840), Expect = 6.650e-105 Identity = 165/207 (79.71%), Postives = 183/207 (88.41%), Query Frame = 1 Query: 1 IAQAAKSTPALVGYIARCFGEIPAKAIYEMDSGERQVIECKSGVQQGDGMGPPLFCFAILPTVSKLRVKYEPRGVRIEAYMDDINLYFKEITEDAIEVVPDLVDELEAVGIIVNRRKSSALPPPGHEVTPTERRLLQEIGLPIAEEGITVVGVPIGTDAYVEECAMKKITEGGAENLAHMLARMPDKQVAHLVTSQSLTQRSGYIER 621 +AQA+KS P LVGYIARC+ EIPAKAIY MDSGER+ IECKSGVQQGDGMGPPLFCF ++P V KLR KY+ GV ++AYMDDI+L+FK+IT + I+V PDLVDELEAVGIIVNR KSSALPPPGH+VTPTERR L + GLPIAEEGITVVGVPIGTDAYVE+ AMK ITEGGAE LA +L RMPDKQVAHLVTSQSLTQRSGYIER Sbjct: 524 MAQASKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKDITAENIQVTPDLVDELEAVGIIVNRGKSSALPPPGHDVTPTERRPLGDAGLPIAEEGITVVGVPIGTDAYVEDIAMKVITEGGAEKLARLLVRMPDKQVAHLVTSQSLTQRSGYIER 730
BLAST of mRNA_L-elsbetiae_contig17610.4975.1 vs. uniprot
Match: A0A6H5JHZ7_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHZ7_9PHAE) HSP 1 Score: 321 bits (822), Expect = 1.120e-103 Identity = 161/205 (78.54%), Postives = 178/205 (86.83%), Query Frame = 1 Query: 7 QAAKSTPALVGYIARCFGEIPAKAIYEMDSGERQVIECKSGVQQGDGMGPPLFCFAILPTVSKLRVKYEPRGVRIEAYMDDINLYFKEITEDAIEVVPDLVDELEAVGIIVNRRKSSALPPPGHEVTPTERRLLQEIGLPIAEEGITVVGVPIGTDAYVEECAMKKITEGGAENLAHMLARMPDKQVAHLVTSQSLTQRSGYIER 621 QAAKS P LVGYIARC+ EIPAKAIY MDSGER+ IECKSGVQQGDGMGPPLFCF ++P V KLR KY+ GV ++AYMDDI+L+FK IT + I+V+PDLVDELEAVGIIVNR KSSALPPPGH+VTP RRLL + GLPIAEEGITVVGVPIGTD YVE+ AMK +TEG A+ LA ML RMPDKQVAHLVTSQSLTQRSGYIER Sbjct: 3 QAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAGRRLLGDAGLPIAEEGITVVGVPIGTDVYVEDIAMKVMTEGSADKLARMLVRMPDKQVAHLVTSQSLTQRSGYIER 207
BLAST of mRNA_L-elsbetiae_contig17610.4975.1 vs. uniprot
Match: A0A6H5KDD0_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDD0_9PHAE) HSP 1 Score: 314 bits (805), Expect = 2.920e-103 Identity = 159/207 (76.81%), Postives = 178/207 (85.99%), Query Frame = 1 Query: 1 IAQAAKSTPALVGYIARCFGEIPAKAIYEMDSGERQVIECKSGVQQGDGMGPPLFCFAILPTVSKLRVKYEPRGVRIEAYMDDINLYFKEITEDAIEVVPDLVDELEAVGIIVNRRKSSALPPPGHEVTPTERRLLQEIGLPIAEEGITVVGVPIGTDAYVEECAMKKITEGGAENLAHMLARMPDKQVAHLVTSQSLTQRSGYIER 621 +A+AAKS P LVGYIARC+ EI AK+IY MDSGER+ IECKSGVQQGDGMGPPLF F + P V KLR KY+ GV ++AYMDDI+L+FK IT + I+V+PDLVDELEAVGIIVNR KSSALPPPGH+VTP ERRLL + GLPIAEEGITVVGVPIGTDAYVE+ AMK +TEGGA+ LA ML MPDKQVAHLVTSQSLTQRSG IER Sbjct: 113 MAKAAKSVPNLVGYIARCYDEISAKSIYAMDSGERRTIECKSGVQQGDGMGPPLFFFILFPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVEDIAMKVLTEGGADKLARMLVHMPDKQVAHLVTSQSLTQRSGNIER 319
BLAST of mRNA_L-elsbetiae_contig17610.4975.1 vs. uniprot
Match: A0A6H5KJC0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJC0_9PHAE) HSP 1 Score: 322 bits (826), Expect = 1.090e-102 Identity = 163/207 (78.74%), Postives = 181/207 (87.44%), Query Frame = 1 Query: 1 IAQAAKSTPALVGYIARCFGEIPAKAIYEMDSGERQVIECKSGVQQGDGMGPPLFCFAILPTVSKLRVKYEPRGVRIEAYMDDINLYFKEITEDAIEVVPDLVDELEAVGIIVNRRKSSALPPPGHEVTPTERRLLQEIGLPIAEEGITVVGVPIGTDAYVEECAMKKITEGGAENLAHMLARMPDKQVAHLVTSQSLTQRSGYIER 621 +AQAAKS P LVGYIARC+ EIPAKAIY MDSGER+ IECKSGVQQGDGMGPPLFCF ++P V KLR KY+ GV ++AYMDDI+L+FK IT + I+V+PDLV+ELEAVGIIVNR KSSALPPPGH+VTP ERRLL + GLPIAEEGITVVGVPI TDAYVE+ AMK ITEGGA+ LA ML RMPDKQVAHLVTSQSLTQRSG IER Sbjct: 551 MAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAEFIQVIPDLVNELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIETDAYVEDIAMKVITEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGCIER 757
BLAST of mRNA_L-elsbetiae_contig17610.4975.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE) HSP 1 Score: 330 bits (846), Expect = 2.000e-102 Identity = 166/207 (80.19%), Postives = 183/207 (88.41%), Query Frame = 1 Query: 1 IAQAAKSTPALVGYIARCFGEIPAKAIYEMDSGERQVIECKSGVQQGDGMGPPLFCFAILPTVSKLRVKYEPRGVRIEAYMDDINLYFKEITEDAIEVVPDLVDELEAVGIIVNRRKSSALPPPGHEVTPTERRLLQEIGLPIAEEGITVVGVPIGTDAYVEECAMKKITEGGAENLAHMLARMPDKQVAHLVTSQSLTQRSGYIER 621 +AQAAKS P LVGYIARC+ EIPAKAIY MDSGER+ IECKSGVQQGDGMGPPLFCF ++P V KLR KY+ GV ++AYMDDI+L+FK IT + I+V+PDLVDELEAVGIIVNR KSSALPPPGH+VTP ERRLL + GLPIAEEGITVVGVPIGTDAYVE+ AMK ITEGGA+ LA ML RMPDKQVAHLVTSQSLTQRSGYIER Sbjct: 525 MAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVEDIAMKVITEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGYIER 731
BLAST of mRNA_L-elsbetiae_contig17610.4975.1 vs. uniprot
Match: A0A6H5JLG6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLG6_9PHAE) HSP 1 Score: 323 bits (829), Expect = 4.410e-102 Identity = 162/207 (78.26%), Postives = 182/207 (87.92%), Query Frame = 1 Query: 1 IAQAAKSTPALVGYIARCFGEIPAKAIYEMDSGERQVIECKSGVQQGDGMGPPLFCFAILPTVSKLRVKYEPRGVRIEAYMDDINLYFKEITEDAIEVVPDLVDELEAVGIIVNRRKSSALPPPGHEVTPTERRLLQEIGLPIAEEGITVVGVPIGTDAYVEECAMKKITEGGAENLAHMLARMPDKQVAHLVTSQSLTQRSGYIER 621 +AQAAKS P LVGYIARC+ EIPAKAIY MDSGER+ IECKSGVQQGDGMGPPLFCF ++P VSK+R KY+ GV ++AY+DDI+L+FK IT + I+V+PDLVDELEAVGIIVNR KSSALPPPGH+VTP ERRLL + GLPIAEEGITVVGVPIGTDAYVE+ AMK ITEGGA+ LA M+ RMPDKQVAHLVTSQ LTQRSG IER Sbjct: 164 MAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVSKVRAKYDHLGVSLKAYVDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVEDIAMKVITEGGADKLARMVVRMPDKQVAHLVTSQLLTQRSGNIER 370
BLAST of mRNA_L-elsbetiae_contig17610.4975.1 vs. uniprot
Match: A0A6H5JI32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI32_9PHAE) HSP 1 Score: 317 bits (813), Expect = 5.940e-100 Identity = 160/207 (77.29%), Postives = 179/207 (86.47%), Query Frame = 1 Query: 1 IAQAAKSTPALVGYIARCFGEIPAKAIYEMDSGERQVIECKSGVQQGDGMGPPLFCFAILPTVSKLRVKYEPRGVRIEAYMDDINLYFKEITEDAIEVVPDLVDELEAVGIIVNRRKSSALPPPGHEVTPTERRLLQEIGLPIAEEGITVVGVPIGTDAYVEECAMKKITEGGAENLAHMLARMPDKQVAHLVTSQSLTQRSGYIER 621 +AQAAKS P LVGYIARC+ EIPAKAIY MDSGER+ IECKSGVQQGDGMGPPLFCF ++P V KLR KY+ GV ++AYMDDI+L+FK IT + I+V+PDLVDELEAVGIIVNR KSSAL PPG +V P ERRLL + GLPIAEEGITVVGVPIGTDAYVE+ A+K I EGGA+ LA ML RMPDKQVAHLVTSQSLTQRSGY+ER Sbjct: 546 MAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALHPPGRDVAPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVEDIAIKVIAEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGYLER 752
BLAST of mRNA_L-elsbetiae_contig17610.4975.1 vs. uniprot
Match: A0A6H5K4U4_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4U4_9PHAE) HSP 1 Score: 307 bits (787), Expect = 4.570e-99 Identity = 166/252 (65.87%), Postives = 182/252 (72.22%), Query Frame = 1 Query: 1 IAQAAKSTPALVGYIARCFGEIPAKAIYEMDSGERQVIECKSGVQQGDGMGPPLFC---------------------------------------------FAILPTVSKLRVKYEPRGVRIEAYMDDINLYFKEITEDAIEVVPDLVDELEAVGIIVNRRKSSALPPPGHEVTPTERRLLQEIGLPIAEEGITVVGVPIGTDAYVEECAMKKITEGGAENLAHMLARMPDKQVAHLVTSQSLTQRSGYIER 621 +AQAAKS P LVGYIARC+ EIPAKAIY MDSGER+ IECKSGVQQGDGMGPPLFC F ++P V KLR KY+ GV ++AYMDDI+L+FK IT + I+V+PDLVDELEAVGIIVNR KSSALPPPGH VTP ERRLL + GLPIAEEGITVVGVPIGTDAYVE+ AMK ITEGGA+ LA ML RMPDKQVAHLVTSQSLTQRSGYIER Sbjct: 1 MAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCXQISWGTSPGVTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHTVTPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVEDIAMKVITEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGYIER 252 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17610.4975.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig17610.4975.1 >prot_L-elsbetiae_contig17610.4975.1 ID=prot_L-elsbetiae_contig17610.4975.1|Name=mRNA_L-elsbetiae_contig17610.4975.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=207bp IAQAAKSTPALVGYIARCFGEIPAKAIYEMDSGERQVIECKSGVQQGDGMback to top mRNA from alignment at L-elsbetiae_contig17610:629..1249- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig17610.4975.1 ID=mRNA_L-elsbetiae_contig17610.4975.1|Name=mRNA_L-elsbetiae_contig17610.4975.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=621bp|location=Sequence derived from alignment at L-elsbetiae_contig17610:629..1249- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig17610:629..1249- >mRNA_L-elsbetiae_contig17610.4975.1 ID=mRNA_L-elsbetiae_contig17610.4975.1|Name=mRNA_L-elsbetiae_contig17610.4975.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1242bp|location=Sequence derived from alignment at L-elsbetiae_contig17610:629..1249- (Laminarionema elsbetiae ELsaHSoW15)back to top |