mRNA_L-elsbetiae_contig1761.4974.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1761.4974.1
Unique NamemRNA_L-elsbetiae_contig1761.4974.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1761.4974.1 vs. uniprot
Match: D7FKS5_ECTSI (WD repeat, SAM and U-box domain containing 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKS5_ECTSI)

HSP 1 Score: 892 bits (2306), Expect = 0.000e+0
Identity = 486/603 (80.60%), Postives = 520/603 (86.24%), Query Frame = 2
Query:  239 MIDGPILVRGSALRDEFSCPITRELMRDPVIAADGHTYDREAIEMWLRNHDTSPKTGQPMEQLSLVPNLNLRRLIKDLLTEGGEGLYLHRADSDSDGVDDETGVSRGDETGRAXXXXXXXXXXXERGREEDREYRFALVAEQILVLKCLGPTDSDWNDKSFRVTERGCVGGRKQPAMLAGADFMQFSDATVSRRHFGIVFDREEKQFSLCDFGSAGGTFVRLATGIPTPLYPGMMIMLGKHQLEVT-------ELSSSDAQAEAXXXXXXXXXXXXRSRPPRPGDNINNPSAAAQGRGTAGVKEGSATDQEEGGG--GQRDRGRPSSAQSAKSSSS-KVEEELSVLRIGGM-TGADGLSSGGDGGPGSGLLDSGEHRGRQDSSRSPLPHENGAGGEDDASVLDTPLQDKHGEGDGGASGDEKEMEGLEKSFEAGVKLAKGHRRVCLECFAPEGTPIQGSRFFVGREGATLGRRQTNTIAFSHDAGGSVMGIDASISGEHARIVYDEDGDFLHIMDGTPTKPSTNGTWFRLSGMHAESRPYPLSNGSEILIGTVRFSVALETMVVEKELTADNRNHFMSLAKD---RSSPPRGTSRESSDRNGR 2005
            M++GP+LVRGSALRDEFSCPITRELMRDPVIAADGHTYDREAIEMWLRNHDTSPKTGQPMEQLSLVPNLNLRRLIKDLL EGGEGLY++R DSD +G                 XXXXXXXXXX R +E +REYRFALV EQILVLKCLGPTDSDWNDKSFRVTERGCVGGRKQPAMLAGADFMQFSDATVSRRHFGI+FD+EEKQFSLCDFGSAGGTFVRLA+G+PTPLYP MMIMLGKHQLE+T       ++ + DA   +            RSRP RPGDN    SAAA+ RGTAGVKEG+ TDQEE GG  GQR+R RP+SAQSAKSSSS KVEEELSVLRIGG  TGADG+SS GDG  G  LLDS EHR RQDSSRSPLPHEN AGGEDDASVLDTPLQDKHGEG+GGASGDEKE+EGLE+SFEAG+KLA+GHRRVCLECFAPEGTPIQGSRFFVGREGATLGRRQTNTIAFSH++GG+VMGIDASISGEHARIVYDE+GDFLHIMDGTPTKPSTNGTWFRLSGMH ESRPYPLSNG+EILIGTVRFSV LE+MVVEKELT DNRNHFMSLAKD   RSSPP G  R+S  R GR
Sbjct:    1 MLNGPLLVRGSALRDEFSCPITRELMRDPVIAADGHTYDREAIEMWLRNHDTSPKTGQPMEQLSLVPNLNLRRLIKDLLAEGGEGLYVYRVDSDEEGXXXXXXXXX--------XXXXXXXXXXGREKEGNREYRFALVTEQILVLKCLGPTDSDWNDKSFRVTERGCVGGRKQPAMLAGADFMQFSDATVSRRHFGIIFDKEEKQFSLCDFGSAGGTFVRLASGVPTPLYPSMMIMLGKHQLEITNACPEDVDVKAVDADGASIAAEDKGGDDASRSRPSRPGDNA---SAAARSRGTAGVKEGATTDQEESGGRGGQRERARPTSAQSAKSSSSSKVEEELSVLRIGGAGTGADGVSSAGDGPAGGLLLDSVEHRVRQDSSRSPLPHENAAGGEDDASVLDTPLQDKHGEGEGGASGDEKELEGLERSFEAGLKLARGHRRVCLECFAPEGTPIQGSRFFVGREGATLGRRQTNTIAFSHESGGTVMGIDASISGEHARIVYDEEGDFLHIMDGTPTKPSTNGTWFRLSGMHTESRPYPLSNGAEILIGTVRFSVTLESMVVEKELTVDNRNHFMSLAKDQDRRSSPPWGAGRQSGSRGGR 592          
BLAST of mRNA_L-elsbetiae_contig1761.4974.1 vs. uniprot
Match: A0A6H5KH40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH40_9PHAE)

HSP 1 Score: 599 bits (1544), Expect = 6.740e-207
Identity = 355/517 (68.67%), Postives = 382/517 (73.89%), Query Frame = 2
Query:  395 SPKTGQPMEQLSLVPNLNLRRLIKDLLTEGGEGLYLHRADSDSDGVDDETGVSRGDETGRAXXXXXXXXXXXERGREEDREYRFALVAEQILVLKCLGPTDSDWNDKSFRVTERGCVGGRKQPAMLAGADFMQFSDATVSRRHFGIVFDREEKQFSLCDFGSAGGTFVRLATGIPTPLYPGMMIMLGKHQLEVT-------ELSSSDAQAEAXXXXXXXXXXXXRSRPPRPGDNINNPSAAAQGRGTA----------------GVKEGSATDQEEGGG--GQRDRGRPSSAQSAKSSSSKVEEELSVLRIGGM-TGADGLSSGGDGGPGSGLLDSGEHRGRQDSSRSPLPHENGAGGEDDASVLDTPLQDKHGEGDGGASGDEKEMEGLEKSFEAGVKLAKGHRRVCLECFAPEGTPIQGSRFFVGREGATLGRRQTNTIAFSHDAGGSVMGIDASISGEHARIVYDEDGDFLHIMDGTPTKPSTNGTWFRLSGMHAESRPYPLSNGSEILIGTVR 1867
            S +TGQPMEQLSLVPNLNLRRLIKDLL EGGEGLY++R +SD +G                  XXXXXXXXX R +E DREYRFALV EQILVLKCLGPTDSDWNDKSFRVTERGCVGGRKQPAML GADFMQFSDATVSRRHFGI+FD+EEKQFSLCDFGSAGGTFVRLA+G+PTPLYP MMIMLGKHQLE+T       ++ + DA   +            RSRP RPGD     SAAA+ RGTA                GVKEG+ TDQEE GG  GQR+R RP+SAQSAKSSSSKVEEELSVLRIGG  TGA+G+SS GDG  G  LLDS EHR RQDSSRSPLPHEN AGGEDDASVLDTPLQDK                                  V L C +       GSRFFVGREGATLGRRQTNTIAFSH++GG+VMGIDASISGEHARIVYDE+GDFLHIMDGTPTKPSTNGTWFRLSGMH ESRPYPLSNG+EILIGTVR
Sbjct:   15 SSQTGQPMEQLSLVPNLNLRRLIKDLLAEGGEGLYVYRVESDEEGDGPXXXXXX---------XXXXXXXXXGREKEGDREYRFALVTEQILVLKCLGPTDSDWNDKSFRVTERGCVGGRKQPAMLDGADFMQFSDATVSRRHFGIIFDKEEKQFSLCDFGSAGGTFVRLASGVPTPLYPSMMIMLGKHQLEITNACPEDVDVKAVDADGASIAAEDKGGDNASRSRPSRPGDIA---SAAARSRGTAXXXXXXXXXXXXXXXAGVKEGATTDQEESGGRGGQRERARPTSAQSAKSSSSKVEEELSVLRIGGTGTGAEGVSSAGDGPAGGLLLDSMEHRVRQDSSRSPLPHENAAGGEDDASVLDTPLQDK----------------------------------VLLFCGS-------GSRFFVGREGATLGRRQTNTIAFSHESGGTVMGIDASISGEHARIVYDEEGDFLHIMDGTPTKPSTNGTWFRLSGMHTESRPYPLSNGAEILIGTVR 478          
BLAST of mRNA_L-elsbetiae_contig1761.4974.1 vs. uniprot
Match: A0A835Z8M7_9STRA (WD repeat, SAM and U-box domain-containing 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8M7_9STRA)

HSP 1 Score: 488 bits (1256), Expect = 1.810e-163
Identity = 292/560 (52.14%), Postives = 340/560 (60.71%), Query Frame = 2
Query:  239 MIDGPILVRGSALRDEFSCPITRELMRDPVIAADGHTYDREAIEMWLRNHDTSPKTGQPMEQLSLVPNLNLRRLIKDLLTEGGEGLYLHRADSDSDGVDDETGVSRGDETGRAXXXXXXXXXXXERGREEDREYRFALVAEQILVLKCLGPTDSDWNDKSFRVTERGCVGGRKQPAMLAGADFMQFSDATVSRRHFGIVFDREEKQFSLCDFGSAGGTFVRLATGIPTPLYPGMMIMLGKHQLEVTELSSSDAQAEAXXXXXXXXXXXXRSRPPRPGDNINNPSAAAQGRGTAGVKEGSATDQEEGGGGQRDRGRPSSAQSAKSSSSKVEEELSVLRIGGMTGADGLSSGGDGGPGSGLLDSGEHRGRQDSSRSPLPHENGAGGEDDASVLDTPLQDKHGEG--DGGASG-DEKEMEGLEKSFEAGVKLAKGHRRVCLECFAPEGTPIQGSRFFVGREGATLGRRQTNTIAFSHDAGGSVMGIDASISGEHARIVYDEDGDFLHIMDGTPTKPSTNGTWFRLSGMHAESRPYPLSNGSEILIGTVRFSVALETMVVEKEL 1909
            MI  P+LV+G  LRDEF+CPITRELMRDPVIAADGHTYDREAIEMWLR HDTSPK GQPM+ L LVPN NL+RLIKDL+ EGGEGLY+            E G   G                       D  YRFALV E +L+LKCLGP +SDWN K+FRVTERGCVGGRK PA L GADFM FSDATVSR+HF + FD+ +K F + D GSAGGTFVR+  G+P PLYPG+MIMLGKHQL VTE +  D QA              RS P    D+     AA                        +D  RPS+                V +   M G  G   G DG  G G + +  H G  D++   L  E   GG DD SV DTP      E   DG A   DE +      ++E   KLA+GHR + LECFAPEGTPIQG ++ VGR+GATLGR+Q+N+IAFSH A G +MGID+SISGEHAR+ Y    D L ++DGTP KPSTNGTWFRLS MHA S P+ L +G E+L+GTVRFS A E MVVE EL
Sbjct:    1 MITRPVLVKGHRLRDEFACPITRELMRDPVIAADGHTYDREAIEMWLRTHDTSPKAGQPMDHLFLVPNHNLKRLIKDLIYEGGEGLYVK-----------EEGADCG----------------------PDAPYRFALVPEHVLILKCLGPVESDWNGKTFRVTERGCVGGRKMPAELHGADFMHFSDATVSRKHFEVFFDKTDKCFKIRDEGSAGGTFVRVPYGVPKPLYPGLMIMLGKHQLLVTEPNRGDKQAPRLPP---------RSEPDVLPDDSGVDMAADS----------------------KDGSRPSTP---------------VCQS--MGGKGGRLRGEDG-TGGGHVANATHMGGLDAA---LAVEEAPGGADDDSVADTPSPAMAAESKDDGAAMAMDEGDERSFGAAYEVEAKLARGHRALHLECFAPEGTPIQGRQYAVGRDGATLGRKQSNSIAFSHMANGQLMGIDSSISGEHARVEYSAARDCLLVLDGTPAKPSTNGTWFRLSQMHARSAPHALRDGMELLVGTVRFSAAHEMMVVEVEL 475          
BLAST of mRNA_L-elsbetiae_contig1761.4974.1 vs. uniprot
Match: D7FNJ7_ECTSI (Armadillo/beta-catenin repeat family protein / U-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNJ7_ECTSI)

HSP 1 Score: 480 bits (1235), Expect = 6.720e-149
Identity = 287/548 (52.37%), Postives = 332/548 (60.58%), Query Frame = 2
Query:  260 VRGSALRDEFSCPITRELMRDPVIAADGHTYDREAIEMWLRNHDTSPKTGQPMEQLSLVPNLNLRRLIKDLLTEGGEGLYLHRADSDSDGVDDETGVSRGDETGRAXXXXXXXXXXXERGREEDREYRFALVAEQILVLKCLGPTDSDWNDKSFRVTERGCVGGRKQPAMLAGADFMQFSDATVSRRHFGIVFDREEKQFSLCDFGSAGGTFVRLATGIPTPLYPGMMIMLGKHQLEVTELSSSDAQAEAXXXXXXXXXXXXR----SRPPRPGDNINNPSAAAQGRGTAGVKEGSATDQEEG---GGGQRDRGRPSSAQSAKSSSSKVEEELSVLRIGGMTGADGLSSGGDGGPGSGLLDSGEHRGRQDSSRSPLPHENGAGGEDDASVLDTPLQDKHGEGDGGASGDEKEMEGLEKSFEAGVKLAKGHRRVCLECFAPEGTPIQGSRFFVGREGATLGRRQTNTIAFSHDAGGSVMGIDASISGEHARIVYDEDGDFLHIMDGTPTKPSTNGTWFRLSGMHAESRPYPLSNGSEILIGTVRFSVAL 1882
            + G  LRD F+CPIT ELMRDPV+  DGHTYDREAIEMWLR + TSPKTG+P+E+L LVPNLNLRRLIKD L EGGE LY+   D D    DD +G     E  R              G  E RE RFALV EQILVLKCLG      N +SFRVTERGCVGGR QP  LAGA+F+Q SDATVS+RHFGI FD+E+K FSL D GSAGGTFVRL  G+ T LYPGM+I+LG+HQLEV ++SS+D++A+A            +    + P  P    N+ S AA+ RG A    GSA    +G    GG+R+   P S Q AKSSSSK                                                                     +H EG+GG S DEKE+E       AG K  + + RVCLECFAPEGTPIQG RFFVGREGATLG R+TNTIAFS+++GG+VMGID  ISG HARIVYD+ G F HI DG   K S NGTW RLSG H ESRPYPLS+G+EILIGTV FSV L
Sbjct: 1037 MHGFTLRDAFACPITGELMRDPVVVEDGHTYDREAIEMWLRKYGTSPKTGEPIERLLLVPNLNLRRLIKDFLIEGGEELYVGGRDGDGGDQDDGSG-----EVDRDEGDGGESGWEERSGTGEHRECRFALVTEQILVLKCLGSVYPGGNIESFRVTERGCVGGRNQPNTLAGAEFVQISDATVSKRHFGIAFDKEDKLFSLRDLGSAGGTFVRLELGVSTLLYPGMIILLGRHQLEVIDVSSTDSEAKAVEGDRNPFAVGDKGSNATSPSSPSAPGNSSSTAARRRGMACSIVGSAAIVNKGPTTDGGEREPRHPISPQPAKSSSSK---------------------------------------------------------------------QHEEGEGGISDDEKELE-------AGAKPGRRNPRVCLECFAPEGTPIQGKRFFVGREGATLGGRKTNTIAFSYESGGTVMGIDDFISGVHARIVYDDGGGFFHITDGNSFKSSKNGTWVRLSGKHTESRPYPLSHGTEILIGTVPFSVTL 1503          
BLAST of mRNA_L-elsbetiae_contig1761.4974.1 vs. uniprot
Match: A0A7S2NWM2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NWM2_9STRA)

HSP 1 Score: 315 bits (807), Expect = 3.270e-95
Identity = 225/609 (36.95%), Postives = 305/609 (50.08%), Query Frame = 2
Query:  218 ASTVSSAMIDGPILVRGSALRDEFSCPITRELMRDPVIAADGHTYDREAIEMWL------RNHDTSPKTGQPMEQLSLVPNLNLRRLIKDLLTEG-GEGLYLHRAD---------SDSDGVDDETGVSRGDETGRAXXXXXXXXXXXERGREEDREYRFALVAEQILVLKCLGPTDSDWNDKSFRVTERGCVGGRKQPAMLAGAD--------FMQFSDATVSRRHFGIVFDREEKQFSLCDFGSAGGTFVRLATGIPTPLYPGMMIMLGKHQL--EVTELSSSDAQAE------------AXXXXXXXXXXXXRSRPPRPGDNINNPSAAAQGRGTAGVKEGSATDQEEGGGGQRDRGRPSSAQSAKSS---SSKVEEELSVLRIGGMTGADGLSSGGDGGPGSGLLDSGEHRGRQDSSRSPLPHENGAGGEDDASVLDTPLQDKHGEGDGGASGDEKEMEGLEKS---FEAGVKLAKGHRRVCLECFAPEGTPIQGSRFFVGREGATLGRRQTNTIAFSHDAGGSVMGIDASISGEHARIVYDEDGDFLHIMDGTPT-KPSTNGTWFRLSGMHAESRPYPLSNGSEILIGTVRFSVALETMVVEKEL 1909
            A+T +S      I+   S LRDEF+CPITRE++ +PVIAADGHTYD+ AIE W+      R   TSPKTG+ +E L L+PN NL+RL++D+L EG G+ LY   AD         S SD                 XXXXX            + +   ALV E++L LKCLGP +S+WN++SF+VTE GC+GGR++P + A           F+QF++ATVSRRHF I +D+  ++F + D GSAGGTFVR+  G    + PG MIM+GKHQL  E  ELSS+ A A                           S  P P         +         +   A DQEE         +P  A             E + ++L+   M  A                                P   G  G+D  SV  +   D+       A  +    + L  S   + +      G   + L CFAPEGTPIQ   + + + GATLGR+Q+NTI+FSH+  G+ +GID+S+SGEHA + Y+E+     + DG    K STNGTW RLSGMH ES  Y ++N +E+L GTVRF V+++  VVE+EL
Sbjct:    6 ATTTASDNKTVLIIPAHSKLRDEFTCPITREIISEPVIAADGHTYDKSAIEQWIHFMQNKRMKPTSPKTGEELEHLHLIPNHNLKRLLRDMLVEGRGDALYQPDADAMAKQQENASSSDKDAQSYNCDNVSSXXXXXXXXXVQTTVMANASASNSKGGMALVREKVLNLKCLGPNESEWNNRSFKVTESGCIGGRRRPTVTAEKQNDRLKQLHFIQFTEATVSRRHFEICYDKNVEEFRIRDLGSAGGTFVRIPPGKSHVMAPGTMIMVGKHQLVAEKFELSSAAAAAHQEEIAGSGDAVVGDVDEDVQRLNDRSSTSPGPDQXXXXXXXSQMSASALTPRNDVAEDQEE---------KPMEAAQHHYQHLMDHNEETDCNILQWADMQKA--------------------------------PSNEGTAGDDCVSVRSSVDCDQDSMSVASAENNLPVTQSLVDSNSNYVSATNSVNGPPVLMLRCFAPEGTPIQNKEYPISKMGATLGRKQSNTISFSHEVNGNQVGIDSSVSGEHANLKYNENTKLFELSDGVGIGKCSTNGTWVRLSGMHKESGFYAIANQTELLFGTVRFQVSIDEQVVEREL 573          
BLAST of mRNA_L-elsbetiae_contig1761.4974.1 vs. uniprot
Match: A0A7R9UA93_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UA93_9STRA)

HSP 1 Score: 307 bits (786), Expect = 1.770e-92
Identity = 193/557 (34.65%), Postives = 272/557 (48.83%), Query Frame = 2
Query:  254 ILVRGSALRDEFSCPITRELMRDPVIAADGHTYDREAIEMWLRNHDTSPKTGQPMEQLSLVPNLNLRRLIKDLLTEGGEGLYLHRADSDSDGVDDETGVSRGDETGRAXXXXXXXXXXXERGREEDREYRFALVAEQILVLKCLGPTDSDWNDKSFRVTERGCVGGRKQPAMLAGADFMQFSDATVSRRHFGIVFDREEKQFSLCDFGSAGGTFVRLATGIPTPLYPGMMIMLGKHQLEVTELSSSDAQAEAXXXXXXXXXXXXRSRPPRPGDNINNPSAAAQGRGTAGVKEGSATDQEEGGGGQRDRGRPSSAQSAKSSSSKVEEELSVLRIGGMTGADGLSSGGDGGPGSGLLDSGEHRGRQDSSRSPLPHENGAGGEDDASVLDTPLQDKHGEGDGGASGDEKEMEGLEKSFEAGVKLAKGHRRVCLECFAPEGTPIQGSRFFVGREGATLGRRQTNTIAFSH-DAGGSVMGIDASISGEHARIVYDEDGDFLHIMDGTPTKPSTNGTWFRLSGMHAESRPYPLSNGSEILIGTVRFSVALETMVVEKELTADN 1921
            +LVRG  LRDE+ CPITREL+RDPV+AADGHTY+R AIE WL +H  SPKT + ME  +L PN+NL +LI+DL+ EGGEGLY+     D++ + +++ +  G                          Y+ AL+ +++L LKCLGP DS WN++SFRV   G +GGR+ P      D + F DATVSRRHF I+ +  +  F + D GSAGGTF+R+      P++PG+M M+GKHQ+   +++  +                                                          RD                    +S+  +GG                                           G+D  +V   P ++            E+++  LE    A     +      LECFAPEGTP+QG  F V R   +LGR+Q N ++FS     G  +GID+S+SG H+RI YDE+ D L +MDG+ +KPSTNGTW RLS MH  S+ +PL  G E+LIGTVRF  +++ ++VEK +  D+
Sbjct:   50 VLVRGRQLRDEYVCPITRELLRDPVMAADGHTYERVAIEKWLVSHRRSPKTQKVMESNTLFPNINLLKLIRDLVAEGGEGLYVLE---DTESMAEDSDMPGG--------------------------YQNALLWQKVLTLKCLGPADSSWNNRSFRVFPHGVLGGRRTPTRQTDRDHIAFGDATVSRRHFEIIQNEADFLFYIRDLGSAGGTFLRVQEKEKIPVFPGLMFMVGKHQMIAKDMAQHE----------------------------------------------------------RD--------------DATHVGISMGCVGGR------------------------------------------GDDQRTVSAEPAREA-----------EEDINSLEPGDIADFHRMRTEHSCVLECFAPEGTPMQGKTFEVERRSVSLGRKQINDVSFSQLGDDGVCLGIDSSVSGIHSRIEYDEEEDALQLMDGSASKPSTNGTWVRLSKMHTRSKFFPLRPGVELLIGTVRFITSVDEVIVEKAIREDD 452          
BLAST of mRNA_L-elsbetiae_contig1761.4974.1 vs. uniprot
Match: A0A7S3MFD7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MFD7_9STRA)

HSP 1 Score: 259 bits (662), Expect = 4.940e-74
Identity = 207/623 (33.23%), Postives = 289/623 (46.39%), Query Frame = 2
Query:  260 VRGSALRDEFSCPITRELMRDPVIAADGHTYDREAIEMWLRNHDTSPKTGQPMEQLSLVPNLNLRRLIKDLLTEGGEGLYLHRADSDSDGVDDETGVSRGDETGRAXXXXXXXXXXXERGREEDREYRFALVAEQILVLKCLGPTDSDWNDKSFRVTERGCVGGRKQPAM--LAGADFMQFSDATVSRRHFGIVFDRE----EKQFSLCDFGSAGGTFVRLATGIPTPLYPGMMIMLGKHQLEVTELSSS-DAQAEAXXXXXXXXXXXXRSRPPRPGDNINNPSAAAQGRGTAGVKEGSATDQEEGGGGQRDRGRPSSAQSAK-----------------SSSSKVEEELSVLRIGGMTGADGLSSGGDGGPGSGLLDSGEHRGRQDSSRSPLPHENGAGGEDD------------------------ASVLDTPLQDKHGEGDGGASGDEKEMEGLEKSFEAGVKLAKGH------RRVCLECFAPEGTPIQGSRFFVGREGATLGRRQTNTIAF-----SHDAGGSVMGIDASISGEHARIVYDEDGDFLHIMDGTPTKPSTNGTWFRLSGMHAESRPYPLSNGSEILIGTVRFSVALETMVVEKELTADN-RNHFMSLAK 1948
            ++G  +RDEF CPIT ELMRDPV+A+DGHTY++ AIE WL+NH  SP++G+PM+ L+ +PN+N+++LI+D++ EGG G Y+             + +S                         +++  F +  E+ILVL+CLGP +SDWN  SF+V   GC+GGRK      +   + + F D TVSRRHF I    +       F + D GSAGGTF+R+  G    L+PGM+I+LGKHQ  ++ +  +  A  ++              +     + I +    A+   +     G+A + E       +R +  + Q +                    S   EE LS   +G    ADG SS  D                         H+   GG+DD                        AS  D  +   H E D     D K    +  +   G   AKG       RR  L C AP+G+P+QG  F V +EGA +GR+ TNTI         +    VM +D +IS EHARI ++       I DGT  KPSTNGTWFRLSG H ES  + LS G E+LIGTVRF V+    + E  L +    N F   AK
Sbjct:   34 LKGMKIRDEFICPITYELMRDPVVASDGHTYEKAAIEKWLKNHKISPRSGEPMDVLT-IPNINIKKLIQDIINEGGHGFYM-------------SDIS-------------------------NKDRMFEVRPEKILVLECLGPPESDWNSLSFQVNRFGCIGGRKHNPNDNMNNREPILFKDITVSRRHFEITNSVDIPTGGSVFHIRDLGSAGGTFIRIPHGKRKQLHPGMIILLGKHQFTISSVDDAPSAGGQSFTGPAGSSKNVSMRKSSLNSEAIMSLVENAEKIISDFAGPGAAPNDE-----LSERLKNLTMQLSSHLADDAPLTVGHDIRLTDHSLNEEERLSSPVLGRPPLADGRSSRAD-------------------------HKGDKGGDDDQMGSHTDNXXXXXXXXPKLTTMRTASAHD--MNALHYEPDVDFDADAKMTTPMTHAHTGGD--AKGGFQRYTARRCTLTCCAPDGSPLQGHSFIVDKEGAMMGRKATNTIPLLMKIEMENGEERVMNVDTAISSEHARIEFEPATGQFFICDGTVDKPSTNGTWFRLSGPHQESSSHVLSAGVEVLIGTVRFLVSESMTISEHGLDSKGISNSFSEAAK 583          
BLAST of mRNA_L-elsbetiae_contig1761.4974.1 vs. uniprot
Match: A0A7S1XUU4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUU4_9STRA)

HSP 1 Score: 239 bits (611), Expect = 2.080e-70
Identity = 120/252 (47.62%), Postives = 157/252 (62.30%), Query Frame = 2
Query:  239 MIDG---PILVRGSALRDEFSCPITRELMRDPVIAADGHTYDREAIEMWLRNHDTSPKTGQPMEQLSLVPNLNLRRLIKDLLTEGGEGLYLHRADSDSDGVDDETGVSRGDETGRAXXXXXXXXXXXERGREEDREYRFALVAEQILVLKCLGPTDSDWNDKSFRVTERGCVGGRKQPAMLAGADFMQFSDATVSRRHFGIVFDREEKQFSLCDFGSAGGTFVRLATGIPTPLYPGMMIMLGKHQLEVTELS 985
            M DG   P LVRG  LRDEF CPITRELM+DPVIAADGHTYDR AIE WL NH  SPKTG+ ME + L+ N+NL +LI+DL+ EGGEGLY+  +D  S+                               +     YR+AL+ +++L  KCLGP +S WN +SFRV   G +GGR++P+ L   D + FSDATVSRRHF IV    + ++ + D GSAGGTF+R+      P++ G+M M+GKHQ+   +L+
Sbjct:   34 MADGYASPTLVRGGQLRDEFVCPITRELMKDPVIAADGHTYDRSAIEQWLLNHRRSPKTGEVMESVGLIRNINLLKLIRDLVNEGGEGLYMAESDKASE------------------------------NKSLPGGYRYALLRQKVLTFKCLGPAESSWNGRSFRVFANGVLGGRRRPSKLTERDHVTFSDATVSRRHFEIVHSTADSRYYIRDIGSAGGTFLRIQMNEKIPVFHGLMFMVGKHQMSARDLT 255          
BLAST of mRNA_L-elsbetiae_contig1761.4974.1 vs. uniprot
Match: W7U452_9STRA (SMAD/FHA domain protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U452_9STRA)

HSP 1 Score: 223 bits (567), Expect = 4.450e-61
Identity = 181/565 (32.04%), Postives = 255/565 (45.13%), Query Frame = 2
Query:  251 PILVRGSALRDEFSCPITRELMRDPVIAADGHTYDREAIEMWLRNHDTSPKTGQPMEQLSLVPNLNLRRLIKDLLTEGGEGLYLHRADSDSDGVDDETGVSRGDETGRAXXXXXXXXXXXERGREEDREYRFALVAEQILVLKCLGPTDSDWNDKSFRVTERGCVGGRKQPAMLAGADFMQFSDATVSRRHF----GIVFDREEKQFSLCDFGSAGGTFVRLATGIPTPLYPGMMIMLGKHQLEVTELSSSDAQAEAXXXXXXXXXXXXRSRPPRPGDNINNPSAAAQGRGTAGVKEGSATDQEEGGGGQRDRGRPSSAQSAKSSSSKVEEELSVLRIGGMTGADGLSSGGDGGPGSGLLDSGEHRGR-QDSSRSPLPHENGAGGEDDASVLDTPLQDKHGEGDGGASGDEKEMEGLEKSF----EAG-VKLAKGHRR--VCLECFAPEGTPIQGSRFFVGREGATLGRRQTNTIAFSHDAGGSVMGIDASISGEHARIVYD-EDGDFLHIMDGTP-TKPSTNGTWFRLSGMHAESRPYPLSNGSEILIGTV-RFSVALETMVVE 1900
            P++VRG  +RDEF CPIT ++ RDPV+A DG TY+R AI  WL  + TSP T + +    LVPNLNL+RLI DL+ EGG GL      +                                    E+  +  A   + ++VL+CLGP +SDW  +S  VT+ G +GGR++  +  G D M F D TVSRRHF    G V +     F + D GSAGGT++RL       L  G MI++GKHQ  V   S                              +  P+ A +                         G+ + A  A  +S+ +   LS                    PG+                         A G +D +            G  G  G +  +  L + +    EA  V   +G  +  + L+CFAPEG+P+Q   F VG EGA++GR+Q+NT++ S + GG V+G+D+++SGEH RI Y  E G F+ +  G    KPSTNGTW RLS +H  S    +    EIL+G + RFSV+ ET ++E
Sbjct:    6 PVIVRGR-IRDEFQCPITAQIFRDPVVAKDGRTYERSAISKWLETNKTSPMTKEEISSADLVPNLNLKRLIYDLVAEGGHGLAAKCTTT------------------------------------EELSHETAFGLDDVMVLRCLGPAESDWIHRSQVVTKEGILGGRRR-ILTGGKDSMVFQDTTVSRRHFEAGWGPVDETSLPSFYIQDLGSAGGTYLRLRPREIMELRDGAMILVGKHQFIVISPSRLH--------------------------ELQLPAPACR------------------------TGQSAVAFEAFHNSATIPTPLS--------------------PGAXXXXXXXXXXXFXXXXXXXXXXXXXALGTEDPNDSIXXXXXXXXXGLRGRQGQDFPLGRLIQRYLQQPEAPLVSAGEGSEQPLLMLQCFAPEGSPMQHRVFAVGVEGASIGRKQSNTVSLSQEKGGEVLGLDSAVSGEHCRIEYHHEKGGFVLVDGGLGGDKPSTNGTWTRLSYIHMTSARQKVERDDEILVGGILRFSVSFETFLME 462          
BLAST of mRNA_L-elsbetiae_contig1761.4974.1 vs. uniprot
Match: A0A482RTF3_9ARCH (FHA domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RTF3_9ARCH)

HSP 1 Score: 188 bits (477), Expect = 7.270e-52
Identity = 99/237 (41.77%), Postives = 142/237 (59.92%), Query Frame = 2
Query:  245 DGPILVRGSALRDEFSCPITRELMRDPVIAADGHTYDREAIEMWLRNHDTSPKTGQPMEQLSLVPNLNLRRLIKDLLTEGGEGLYLHRADSDSDGVDDETGVSRGDETGRAXXXXXXXXXXXERGREEDREYRFALVAEQILVLKCLGPTDSDWNDKSFRVTERGCVGGRKQ-PAMLAGA-DFMQFSDATVSRRHFGIVFDREEKQFSLCDFGSAGGTFVRLATGIPTPLYPGMMIM 949
            D   ++RG  +RDEF CPIT ELMR+PV+A+DGHTY++ AI+ WL+ + TSP++G+PM+ L  +PN+NL++LI+D++ EGG G Y              + +S  D                           F +  E++L+L+CLGP +SDWN +SF+V + GCVGGRK  P   A   + + F D TVSRRHF + +D+    F L D GSAGGTF+R+  G    L+PGM+I+
Sbjct:   13 DNSKVMRGMKIRDEFLCPITYELMREPVVASDGHTYEKNAIDKWLKTNHTSPRSGEPMDNLC-IPNINLKKLIQDIINEGGAGFYT-------------SDISNKDRI-------------------------FEVCPEKVLILECLGPPESDWNLQSFQVNKLGCVGGRKHNPEDSANLREIVLFKDITVSRRHFEVTYDKNS--FFLRDLGSAGGTFLRIRYGAKKQLHPGMIIL 208          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1761.4974.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKS5_ECTSI0.000e+080.60WD repeat, SAM and U-box domain containing 1 n=1 T... [more]
A0A6H5KH40_9PHAE6.740e-20768.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z8M7_9STRA1.810e-16352.14WD repeat, SAM and U-box domain-containing 1 n=1 T... [more]
D7FNJ7_ECTSI6.720e-14952.37Armadillo/beta-catenin repeat family protein / U-b... [more]
A0A7S2NWM2_9STRA3.270e-9536.95Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7R9UA93_9STRA1.770e-9234.65Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S3MFD7_9STRA4.940e-7433.23Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S1XUU4_9STRA2.080e-7047.62Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
W7U452_9STRA4.450e-6132.04SMAD/FHA domain protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A482RTF3_9ARCH7.270e-5241.77FHA domain-containing protein (Fragment) n=1 Tax=a... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1761contigL-elsbetiae_contig1761:15194..23445 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score898.3
Seed ortholog evalue2e-258
Seed eggNOG ortholog2880.D7FKS5
Preferred nameKIAA1107
KEGG koko:K10480
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ubiquitin-protein transferase activity
EggNOG OGsKOG0167@1,KOG0167@2759
Ec32 ortholog descriptionTetratricopeptide-like helical domain
Ec32 orthologEc-01_005190.4
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04121
Ec32 ortholog descriptionSMAD/FHA domain
Ec32 orthologEc-21_001960.1
Exons10
Model size2092
Cds size1794
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1761.4974.1prot_L-elsbetiae_contig1761.4974.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1761 15254..23207 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815734.2241604-UTR-L-elsbetiae_contig1761:15193..152531622815734.2241604-UTR-L-elsbetiae_contig1761:15193..15253Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1761 15194..15253 -
1691683068.2081637-UTR-L-elsbetiae_contig1761:15193..152531691683068.2081637-UTR-L-elsbetiae_contig1761:15193..15253Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1761 15194..15253 -
1622815734.3730574-UTR-L-elsbetiae_contig1761:23207..234451622815734.3730574-UTR-L-elsbetiae_contig1761:23207..23445Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1761 23208..23445 -
1691683068.3157325-UTR-L-elsbetiae_contig1761:23207..234451691683068.3157325-UTR-L-elsbetiae_contig1761:23207..23445Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1761 23208..23445 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815734.238579-CDS-L-elsbetiae_contig1761:15253..154241622815734.238579-CDS-L-elsbetiae_contig1761:15253..15424Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1761 15254..15424 -
1691683068.2230706-CDS-L-elsbetiae_contig1761:15253..154241691683068.2230706-CDS-L-elsbetiae_contig1761:15253..15424Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1761 15254..15424 -
1622815734.2570186-CDS-L-elsbetiae_contig1761:15886..159821622815734.2570186-CDS-L-elsbetiae_contig1761:15886..15982Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1761 15887..15982 -
1691683068.2320213-CDS-L-elsbetiae_contig1761:15886..159821691683068.2320213-CDS-L-elsbetiae_contig1761:15886..15982Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1761 15887..15982 -
1622815734.2690418-CDS-L-elsbetiae_contig1761:16730..169191622815734.2690418-CDS-L-elsbetiae_contig1761:16730..16919Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1761 16731..16919 -
1691683068.240241-CDS-L-elsbetiae_contig1761:16730..169191691683068.240241-CDS-L-elsbetiae_contig1761:16730..16919Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1761 16731..16919 -
1622815734.2842221-CDS-L-elsbetiae_contig1761:18200..183441622815734.2842221-CDS-L-elsbetiae_contig1761:18200..18344Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1761 18201..18344 -
1691683068.2489603-CDS-L-elsbetiae_contig1761:18200..183441691683068.2489603-CDS-L-elsbetiae_contig1761:18200..18344Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1761 18201..18344 -
1622815734.3005369-CDS-L-elsbetiae_contig1761:18707..191751622815734.3005369-CDS-L-elsbetiae_contig1761:18707..19175Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1761 18708..19175 -
1691683068.2640312-CDS-L-elsbetiae_contig1761:18707..191751691683068.2640312-CDS-L-elsbetiae_contig1761:18707..19175Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1761 18708..19175 -
1622815734.3122725-CDS-L-elsbetiae_contig1761:19563..196801622815734.3122725-CDS-L-elsbetiae_contig1761:19563..19680Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1761 19564..19680 -
1691683068.2722998-CDS-L-elsbetiae_contig1761:19563..196801691683068.2722998-CDS-L-elsbetiae_contig1761:19563..19680Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1761 19564..19680 -
1622815734.3252044-CDS-L-elsbetiae_contig1761:19960..201281622815734.3252044-CDS-L-elsbetiae_contig1761:19960..20128Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1761 19961..20128 -
1691683068.2804377-CDS-L-elsbetiae_contig1761:19960..201281691683068.2804377-CDS-L-elsbetiae_contig1761:19960..20128Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1761 19961..20128 -
1622815734.3368084-CDS-L-elsbetiae_contig1761:20853..211291622815734.3368084-CDS-L-elsbetiae_contig1761:20853..21129Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1761 20854..21129 -
1691683068.2885094-CDS-L-elsbetiae_contig1761:20853..211291691683068.2885094-CDS-L-elsbetiae_contig1761:20853..21129Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1761 20854..21129 -
1622815734.3486223-CDS-L-elsbetiae_contig1761:21691..218351622815734.3486223-CDS-L-elsbetiae_contig1761:21691..21835Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1761 21692..21835 -
1691683068.2966247-CDS-L-elsbetiae_contig1761:21691..218351691683068.2966247-CDS-L-elsbetiae_contig1761:21691..21835Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1761 21692..21835 -
1622815734.3610957-CDS-L-elsbetiae_contig1761:23186..232071622815734.3610957-CDS-L-elsbetiae_contig1761:23186..23207Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1761 23187..23207 -
1691683068.3064554-CDS-L-elsbetiae_contig1761:23186..232071691683068.3064554-CDS-L-elsbetiae_contig1761:23186..23207Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1761 23187..23207 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1761.4974.1

>prot_L-elsbetiae_contig1761.4974.1 ID=prot_L-elsbetiae_contig1761.4974.1|Name=mRNA_L-elsbetiae_contig1761.4974.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=598bp
MIDGPILVRGSALRDEFSCPITRELMRDPVIAADGHTYDREAIEMWLRNH
DTSPKTGQPMEQLSLVPNLNLRRLIKDLLTEGGEGLYLHRADSDSDGVDD
ETGVSRGDETGRAAREQGGGGARRERGREEDREYRFALVAEQILVLKCLG
PTDSDWNDKSFRVTERGCVGGRKQPAMLAGADFMQFSDATVSRRHFGIVF
DREEKQFSLCDFGSAGGTFVRLATGIPTPLYPGMMIMLGKHQLEVTELSS
SDAQAEAAAEDDGGSAASSRSRPPRPGDNINNPSAAAQGRGTAGVKEGSA
TDQEEGGGGQRDRGRPSSAQSAKSSSSKVEEELSVLRIGGMTGADGLSSG
GDGGPGSGLLDSGEHRGRQDSSRSPLPHENGAGGEDDASVLDTPLQDKHG
EGDGGASGDEKEMEGLEKSFEAGVKLAKGHRRVCLECFAPEGTPIQGSRF
FVGREGATLGRRQTNTIAFSHDAGGSVMGIDASISGEHARIVYDEDGDFL
HIMDGTPTKPSTNGTWFRLSGMHAESRPYPLSNGSEILIGTVRFSVALET
MVVEKELTADNRNHFMSLAKDRSSPPRGTSRESSDRNGRGRGTGIGR*
back to top

mRNA from alignment at L-elsbetiae_contig1761:15194..23445-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1761.4974.1 ID=mRNA_L-elsbetiae_contig1761.4974.1|Name=mRNA_L-elsbetiae_contig1761.4974.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8252bp|location=Sequence derived from alignment at L-elsbetiae_contig1761:15194..23445- (Laminarionema elsbetiae ELsaHSoW15)
ATCCAAGAGAGCGCAAGGGAGTGTGTCCGTGTGGCGGGAACACGCGAAGA ACCTGACCATATCCTGTACTGGGAAAGCTTCGGCCTCACGGGAAGCTAAC GTTTTGCTGGCGGCCCATTTTTTTCGACCCGGTTTTCGAAAATAATTCAT TCGCCCGTGCTCGTACCTGCTGTCCTCGGGTTTACGCCGGTTACACATCG TCAAGCGCGAAAGAGAAGCGTCTACGGTCTCAAGCGCCATGATTGACGGG CCTATCTTGGTGAGGAGGGTAGAGAGAAATGGAGGGTCTACGACCAAATA TGGTATGGCTGCCGCCGGCAAGTTGGTTGACGAAAATTCGTGGTGGGTTT CGTTTCCCAAGCCTTTATTTTTTTGTCCCACGGAGAGTGTGAAAGTTCAA CACATTTCCTCTCCCGACGCACTGGTAGAAACCCTGTCTCTTCTAGTATC GCCAGGCATACAGGCGGGTGTAGCCCTGTCCGCCTTCTCTCGATATCGGA TATGCCGGTCGCTGGAATTGCCCGCCATCTGGTTTGATATGCCGAAATTT TGCAAATTTGCCAACGTTGCCCTAGATGTACTTATATTTAGAAGCCCTGG GTAGGTAGTTTGCTACCCTTTGGTCTTTTCGGCTCCCCTCGTCTCTCTGG GTTGGCTGCTGTTTCAGGCCAACAAACGGCCACCTCACGCGTGCTGTTGA CGTATATCTACGGTACAGCAGGAGTAGTTTAAGTGCAAGCTGCTGCTCGC GTGAATCGGCTGAGTTCTGAATGTACCATCTACACACGTCTGTCAACAGC CCCTCTGTGGGGCGGCAAAAAACATATCCCATTTTATGCCCCGCGACAGC GACAAGGGATAACCGAGTGGAACAGCAGCAGTAGTGAGCGGTTCTGCTCG AGAATTTGCAAAGGCTAGCACAAACATTTCGATCACCCTTGAGTAGCCAC TTTGAGGGAATTGATGAATAATCGACCGCGTGACCTACACTGCTTGTCCT TTGTACATTTAGTCGGAGGACTGGCAGGAGTCTCGACAAAACTCTTCGGA ATGTGTTGTATGTACACAGGAGCAAATATTTAACAAAAAACACGGTTCGT TGGTGCATTTCGCCCCTGTCTGATCGAGTTCGTACTCGCGTACATACTTT ATGTCGTTACTTTGCCAATGGTGACTGAGTTATAGAAGATACTATTATTT TGTTGATACATATGCACCATGATGTACGTACGGCGATGACCGATTGAGGA GAGGCGGGCGGAGGGATCGCGTGGAGGCTTCGGTGTTGGTCGCGGCTTGA CTATTATTCCATGACGTCCCTGGGGATGGTCCATTGTTGCCAAGCTTGTT TTTTACCTACATACTTCTACGTAAGAAATGCAAAGCCTACACATAGCTGC TCGGCAACACAAGGTTTTAGATCACTTGTTAGTAAACATGTAAAAATCAG CTCGCGTTTGTTGCGCCGCGCGCCCCGCCCGGCGCGAAGCATCAGCGTCC GCGGGGTGGACTGCTACTTGTTTTAAAATACTCTCTCGCACTTGTTCCTT GCTCCCGTAATTGTTGTCCCGTGTTCTTTTGGGGGGGGGGTCGTCGTTTC GAAACGGCAGGTACGAGGCTCGGCGCTCCGGGATGAGTTCTCGTGTCCCA TTACACGTGAGCTGATGCGGGATCCGGTCATCGCGGCGGACGGCCACACG TACGACAGGGAAGCCATCGAAATGTGGCTACGAAACCATGACACCTCCCC AAAGGTGGGAAACAGCAGTATGTAGCACAGTGCCGCCGCTTGCCCTGTCA TCTGCCCGGATGTATATATGTACACAGGTATTCACGAAGTACGTGTGTCA CATGTACGCATTACGGCAAGATACGCAACAGCGCAACGCTGAGGTGTGGA TTCAATCAAGGCATTTCCCAGGACATCCGTGCTGGAGAGGGAGGGATGGC CACCTTGGTGTCAACAGCAGTGACCTCTTGTCGAACCTCAGTTTCTATCG CCAACAAATAGTTCTAAGACGTATTTTTGAGTCGGAGTATGCTTTGCACA TGGAGTGGATCAGGTCATATGCATACCAATCAGCCAGGCGCGTACAGTAG CGGCGGAAAAACTCTTTCCATCTTGTATCTGGCTTTCTTCTTTTGGTAGT GTATATTTCCACGACGGAAAGGCTAGATTGACATGCATTTGATATGTTTG TACTCAAGTATGTACTGCTGTTTATGTTTTTCATCTCGGATGCAAACCTG TTGCTCTTCCCGACCCCCACGCGATCGGTGTTCGCTTGGTCCCTTTTCGC GGTCTCTCTCTGCCAGACCGGCCAACCCATGGAGCAGCTGTCGCTGGTGC CCAACCTGAACCTCCGGCGATTGATCAAGGACCTCCTGACCGAAGGGGGC GAAGGACTGTACCTGCACCGCGCTGACAGTGATAGTGACGGTGTTGACGA TGAAACTGGCGTTAGCAGAGGCGATGAGACTGGGCGGGCTGCTAGGGAAC AAGGAGGAGGGGGAGCGAGGCGGGAGAGGGGCAGAGAGGAAGACCGGGAG TACCGCTTCGCGCTGGTGGCCGAACAAATCCTCGTGCTTAAGGTGCGATT CACGAAGATGCTGAAGGCACTGACTGCTATTGGCAAGCATGCCTGCTTGG GCTTCCACCTGTTTCGTGGAGAAACGGCTATTTGGCTGTATGGGGTTAGG AGTTGAGTCCGTTGTGCACAGGTGACCAGCGCGCTTGGTTGGGAATTAGC AAGAGCGCACTTGTAGCAAGAGCGCACCTGTTTTCAAGCGACAAGCGATA CAGACGCCTTCGAGCTAGGAGTACGGCGGTGTCGTGGAATTGACGTTCAT CTAACACGGTGGGACCTTCTGCCCGTACGTATCGCCGAAAGGCCAAGGGC CAAATCCGATAGAGCTTATATCCGAGGGGGCTGATCCTGCATGTGCGTAC GTGCGTGCGTGGTGTTCGAAAAGCGGCTGCTAGAATGTATGTACGCGGAA GTCGGTAATAAGTGAGCTTTGAAGCAGTAGTGCCGGCCGAGTAGAGTGCG GAAAAGTGATGGGCGAAGCGCATTGCTTGCAGCATACCTCTCTGTCAGAA AGTGCTGATTGTGCTGCTTTTATATATATCGTATCGGAGCACAACATAGC AATCGATATTTTTGCCAAAATCTTGAGGTCCCTTTGTGTGCAGGACCTCC TCCTCCTCACCACCACATTGTACTCACTGCCAATGTTTTTCACCTCGTGT TGCCTTCGGCCCCCCCGGACTGGCTGTTCTTCCCCGTCGCCTACTTGTGC ACTGATGCTTTTCGCAGTGCCTGGGTCCTACAGATTCGGACTGGAACGAC AAGTCATTTCGCGTCACGGAGCGCGGGTGCGTGGGGGGGCGCAAGCAGCC CGCCATGCTGGCAGGGGCGGACTTTATGCAGTTCTCCGACGCAACTGTCA GCAGGCGCCACTTCGGCATCGTGTTCGACAGGGAGGTGCGTATCAAATCG CTCGGATTGTCCGCCAGCGCTACTGTATGTCCATCATCATTCAGCGTTAG TTTTGTGGTGTGACGTTGGCGCGCCGTTGGTTCCCCTCTTGATGCTGTGT CACAACGGATTGATGAGTTGGAGGTTTCGGAGAGTGATGCTGTCCGGTGC TGCATGCAAACGTAGAGGCAGACGCTCGCAGCAAAAATCTGGTGCCCCTG TTCCAACCTCCCTTTCGACGGTTTTGTCTTCTCGCTCCGTCCGACGCCCC CTCCACCGCCCCCAGGAAAAGCAATTTTCGCTGTGCGATTTCGGCAGCGC AGGCGGGACATTCGTGCGCCTTGCGACCGGGATTCCTACTCCTCTCTACC CCGGCATGATGATCATGCTCGGCAAGCACCAGGTGCGGTGTTTGGATTAT TCTCGTGTTTTTCCCATCGTCAGACTGCGTACGTACGTACATAGCCGTTC GTTTTGACAGCGATCGCACATACGTAGAGGAAAGTGAGTGCGCACACCAA GCTGGCAAGGCAGGCAAGCGTCCACAGGTGTATCATTTCTGTACCGCGTG AACCAGCGTGTGCGCGCACGAGACTCGTGGCTCACGGGGCTTTGCAGAGG CGCCGCTTGTGGTTATCGCGGGCCCGTTCTCAAGACAAGGTGTGCAGCAC TCTTGTGTGTGTGTTTCGATCCGAATTTTGCTCCGGCCCGCGGTGTACCT GCTCCTCTCCTCTCTCTTCTCGTCTCTCATCGTCCCAACTCCCCTCCCAT GCCCACCAAACAAACACCAGCTGGAGGTGACGGAGCTTTCCTCCTCCGAC GCCCAGGCAGAGGCGGCCGCCGAGGATGACGGTGGTAGCGCCGCATCATC GCGCTCCAGACCACCACGGCCAGGAGACAACATCAACAACCCCTCGGCGG CGGCGCAGGGCAGGGGCACGGCGGGGGTAAAGGAAGGGTCCGCAACGGAC CAAGAGGAAGGCGGGGGGGGGCAGCGGGATCGCGGGCGGCCCAGCAGCGC GCAGTCGGCCAAGTCGTCGTCTTCGAAGGTCGAGGAGGAGCTGTCGGTGC TGAGGATCGGGGGGATGACGGGAGCAGACGGGCTTTCTTCGGGGGGAGAT GGGGGCCCCGGCAGCGGGTTGCTGGACAGCGGGGAGCACCGGGGGAGGCA GGACAGCAGCAGATCGCCGTTGCCGCACGAGAACGGGGCCGGTGGGGAGG ACGATGCGAGCGTGCTGGACACTCCTCTTCAGGATAAGGTGAGGGAAGGG AAGGTCCATGCGGGAAAGTAGAGTTCTGCCCCCGGTGGTGCTAGGGAGGG GGAAGACCTGTCTTACCTATCTTCTCGTCGAGCGATCTTCCTCGCGACAG AGTCTATTCGTTCACCGACCAGCAGAGTGTCGTCACAACTCCTTACTGCT GTTGTGACAAGGCACACGCAAGCCCGAGATAGCAGCGCAATAGCGGCATT CCCTGCTCCAGCGTCATGAGGTACTACCACTACTACGCTGTAGATGCCTG TTTGGCCACGCGCGTTTGCTGCATGATATTATTTTCCACCTTGCTCGGAC GCTCTTTCTTGAAGCCTCTCTTTTCCCTCCCGGACCGGCTGTTGCTTGCA GCACGGAGAGGGCGATGGGGGCGCGTCCGGCGACGAGAAGGAGATGGAGG GGCTAGAAAAGTCGTTCGAGGCCGGGGTAAAGCTGGCGAAGGGGCACCGA AGAGTCTGCTTGGAGTGTTTCGCGCCGGAAGGAACCCCGATACAGGTATG TATGTATGTATTGTATCAAGCTCGAGATCAAGCTCAATCTCAATCTCAAG CTCAAGCTCAAGCTCAAGCTACACCAGTCGCTTAAGTGCGTAGCCGCCCT GTATGTCTCTGTTTTATGTGAGCACTGGTGGTGCCGTCTATTTAGCGCAA GAGATCGAGTTTATTCTGTGTGTGCGTGCAGATGGTCGGTACACCGCCCA TCTGCCTGTTCGGTAGCTTTAAGCTGCGCGCGGTGTTGGACGGGGAGAGA TAAGTAGTGTGTGACCCACCCACCCACACGCAACACCCAACACGAACAAG GAAACACAGGGACAGAGGCTAAGTTCTCCCATAATGGCTTTCCGTCGAGC GCTGCTGCGGAAATACGCCACTGCTGCTGTATGCGTCGCTTTCCCGCTCT GCGTCTAGTCTCCACGAGTGGTGTCTGCGTATTTATGTACATAAGATGTG GGAGGTGTGGATGGGTGGACCACATACAACAGTGTACAAGTTGGAAGAAA GCAGTTGAACTTGTTATCATACATGGGCTCATACCTGGGACACACACCCC TGCACATCCCCCAGAGTATTTGTTTCCGGATCCCCATTGCTGGCGACGAA AGTGACGCATGTCTGGTCTCCCTCGTTTCTCGAAGAGAGATGGCCGTGCG TGTGTTGGAGTGTGTGCGCATGCCGTGTATGGCAGCGTCGCGAAGTCTCG CGAAAGGCTGGCTAGTCAATTGAGACAGAACGGTTCTACAATGTAGCTGG GTACCGCAGTATAATACGCAACAGCCTTGTAGCGAAGATCACGATTTGGC AAGATGTCGATAAACGGGTTCATCGATGGTGACATCCTGTAGGCCTGCTC TTGAACACCCCACGGTGGTGCTTCCTTGGCCTCTGCCATCTGTATGTACG GTTTCGACACGCTTCATCGCCTTCTTCTCATACCTCGCTTGTGCGGCTCA ACAGCCATGCTTTGTACGGATTTGGGGTAGTCGTGGAGGGGTCGTGGCAC CGCTCTGGGCCGAGGTGAGCGGCCTGGTGTCGGCTCCGCTGTGATACGGT TTAGCTTGCACTGGAACGGTTTGAGTTGCCGGAGCGTCTGGCGGAAGATA TCGAGCCCCCTCACAACCCCAACACTGCTGTCGATAGCTTGCTGTGTAAA TACTTCGTACAAAACCCCTTGGAAACCTCCCGCCCGGTTTGACAAAACAC ACGAACGTTCTGTTGCAACGGCTTGCTTTTCGAATCCGGACACCCATTGT TGTCGACGTGCTGGACACGACTACAGGGGAGTCGTTTCTTCGTGGGGAGG GAAGGGGCTACTCTCGGGCGGCGGCAGACCAACACAATCGCCTTCTCGCA CGACGCGGGCGGATCCGTCATGGGGATAGACGCATCCATATCGGGAGAGC ACGCCAGGATCGTGTACGACGAGGACGGCGACTTTTTGCACATTATGGAC GGCACCCCCACGAAGGTGCAGCGCGCTATGTACATATCATGCATGCACAT GTATATACTCCGGAATTGTAGGCGGGTGAGGGAAGCCTCGGCTTTCGATA GCTCTCTTTGTTTTACCTGGCGTGGAATCTAGTTTTTCTAGCTTACTTTT GTTTTTATTTTATTTTATTTTCCGGGTGGTACGTACCCTGTACCTTCTTT TATTTTAGTGCCAGCGAGACGCAAGACCCCTGGGAGAGACAGTAAGTTTT GTGACCACGAGTCAGTGAAGAATTGTGACCACGTATCATTGTTTTGTGGC CACGGGCCCCCATGGATGTTTTGGACTAGAGAGCTGAAGTGAGAAACAAC AACGCATGGCCTGCTCGGGGACGACTTTCAAAACATTTACGTATTTACCC GGTCTTTGTCCAAGAAAAGGGTCATTTCGAGGAGGTGTCGGCTTGCTTGG CTCGCTCGTCCTACATGTAAGTGAAAACGCTTACGGCGAAGTGCTACATG TGCCGCCTGTTCCACAAGAAATGTTTGTGAATCAGTAGGATTGCTGGCGG GGGGGGGGGTACTCGTGTGTCTGCGGTGGCATATTTATACGGAAAACATT TTTGAAAAAAACAACGAAGGAAAAAGAGGAGCTTTTTTTTTCATGATAGG TCGCCGGAGACCAAACAGATTTCGTTGGAGAAGGAAGGTCAGATGTGTCC ACCCCTGACATTCTTGTCCACCCACCGCCCCCCTCCGACCCCGTTGTTGT GCTGGCCTTGAAGCCGTCCACGAACGGGACCTGGTTCCGGCTGAGCGGCA TGCACGCCGAGAGCAGGCCGTACCCCTTGTCCAACGGCTCCGAGATCCTC ATCGGAACGGTGAGGGCATGCCATGCGCTTACTGAAGTTTGGTACAACAT CGTGTGTTTTTTTGTACACGTGCTCTAAATCTTCTTCTGGGGCAGGATGT ACCCACTTGCTGCCAGCTCTCTCGCGGGAGGCCCCATCTACTCCAGTTTT AGAGAGCAATTCAAACGTCGTGCGGGAAGGGGGGGGGCGAGAAGGCTCGT TGCGCGCTGGTCCAGCCTGTTCGCTTGTGAGCGACCAGGTGGTTTGAAAG AGCAGTTAATGAATGCCAGCCACCCTTTCGCGACAACGCCCACCTGGGCA CGCGCCGCGCGCTTTGTTGAGTCTGTTTTCTCGTCCGTGTGCGTCGACCA AAAACCCGCAACGCGTTCGTTACGGCTGGGCGATTTGTCAACACATAAGT CAGTATAAAAAAATGTGTGTTCCTGCGCAAACGTTTCCCCGTCCGGTGGC AAACAACTCGTGAAAACACAGGTGCGATTCTCGGTGGCCCTGGAGACGAT GGTCGTCGAGAAGGAGCTCACCGCGGACAACCGAAATCACTTCATGTCGC TCGCGAAGGACAGGAGCTCGCCGCCGCGGGGAACAAGTAGAGAAAGCAGC GACCGCAACGGGAGGGGCCGGGGCACTGGGATTGGCCGGTGACTACCCCC CTGCTTTTTTTTTCCCCGTGCCGTCGGCGTGTTGACTGGGACTGAGGGAG AG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1761:15194..23445-

>mRNA_L-elsbetiae_contig1761.4974.1 ID=mRNA_L-elsbetiae_contig1761.4974.1|Name=mRNA_L-elsbetiae_contig1761.4974.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3588bp|location=Sequence derived from alignment at L-elsbetiae_contig1761:15194..23445- (Laminarionema elsbetiae ELsaHSoW15)
ATGATTGACGGGCCTATCTTGATGATTGACGGGCCTATCTTGGTACGAGG
CTCGGCGCTCCGGGATGAGTTCTCGTGTCCCATTACACGTGAGCTGATGC
GGGATCCGGTCATCGCGGCGGACGGCCACACGTACGACAGGGAAGCCATC
GAAATGTGGCTACGAAACCATGACACCTCCCCAAAGGTACGAGGCTCGGC
GCTCCGGGATGAGTTCTCGTGTCCCATTACACGTGAGCTGATGCGGGATC
CGGTCATCGCGGCGGACGGCCACACGTACGACAGGGAAGCCATCGAAATG
TGGCTACGAAACCATGACACCTCCCCAAAGACCGGCCAACCCATGGAGCA
GCTGTCGCTGGTGCCCAACCTGAACCTCCGGCGATTGATCAAGGACCTCC
TGACCGAAGGGGGCGAAGGACTGTACCTGCACCGCGCTGACAGTGATAGT
GACGGTGTTGACGATGAAACTGGCGTTAGCAGAGGCGATGAGACTGGGCG
GGCTGCTAGGGAACAAGGAGGAGGGGGAGCGAGGCGGGAGAGGGGCAGAG
AGGAAGACCGGGAGTACCGCTTCGCGCTGGTGGCCGAACAAATCCTCGTG
CTTAAGACCGGCCAACCCATGGAGCAGCTGTCGCTGGTGCCCAACCTGAA
CCTCCGGCGATTGATCAAGGACCTCCTGACCGAAGGGGGCGAAGGACTGT
ACCTGCACCGCGCTGACAGTGATAGTGACGGTGTTGACGATGAAACTGGC
GTTAGCAGAGGCGATGAGACTGGGCGGGCTGCTAGGGAACAAGGAGGAGG
GGGAGCGAGGCGGGAGAGGGGCAGAGAGGAAGACCGGGAGTACCGCTTCG
CGCTGGTGGCCGAACAAATCCTCGTGCTTAAGTGCCTGGGTCCTACAGAT
TCGGACTGGAACGACAAGTCATTTCGCGTCACGGAGCGCGGGTGCGTGGG
GGGGCGCAAGCAGCCCGCCATGCTGGCAGGGGCGGACTTTATGCAGTTCT
CCGACGCAACTGTCAGCAGGCGCCACTTCGGCATCGTGTTCGACAGGGAG
TGCCTGGGTCCTACAGATTCGGACTGGAACGACAAGTCATTTCGCGTCAC
GGAGCGCGGGTGCGTGGGGGGGCGCAAGCAGCCCGCCATGCTGGCAGGGG
CGGACTTTATGCAGTTCTCCGACGCAACTGTCAGCAGGCGCCACTTCGGC
ATCGTGTTCGACAGGGAGGAAAAGCAATTTTCGCTGTGCGATTTCGGCAG
CGCAGGCGGGACATTCGTGCGCCTTGCGACCGGGATTCCTACTCCTCTCT
ACCCCGGCATGATGATCATGCTCGGCAAGCACCAGGAAAAGCAATTTTCG
CTGTGCGATTTCGGCAGCGCAGGCGGGACATTCGTGCGCCTTGCGACCGG
GATTCCTACTCCTCTCTACCCCGGCATGATGATCATGCTCGGCAAGCACC
AGCTGGAGGTGACGGAGCTTTCCTCCTCCGACGCCCAGGCAGAGGCGGCC
GCCGAGGATGACGGTGGTAGCGCCGCATCATCGCGCTCCAGACCACCACG
GCCAGGAGACAACATCAACAACCCCTCGGCGGCGGCGCAGGGCAGGGGCA
CGGCGGGGGTAAAGGAAGGGTCCGCAACGGACCAAGAGGAAGGCGGGGGG
GGGCAGCGGGATCGCGGGCGGCCCAGCAGCGCGCAGTCGGCCAAGTCGTC
GTCTTCGAAGGTCGAGGAGGAGCTGTCGGTGCTGAGGATCGGGGGGATGA
CGGGAGCAGACGGGCTTTCTTCGGGGGGAGATGGGGGCCCCGGCAGCGGG
TTGCTGGACAGCGGGGAGCACCGGGGGAGGCAGGACAGCAGCAGATCGCC
GTTGCCGCACGAGAACGGGGCCGGTGGGGAGGACGATGCGAGCGTGCTGG
ACACTCCTCTTCAGGATAAGCTGGAGGTGACGGAGCTTTCCTCCTCCGAC
GCCCAGGCAGAGGCGGCCGCCGAGGATGACGGTGGTAGCGCCGCATCATC
GCGCTCCAGACCACCACGGCCAGGAGACAACATCAACAACCCCTCGGCGG
CGGCGCAGGGCAGGGGCACGGCGGGGGTAAAGGAAGGGTCCGCAACGGAC
CAAGAGGAAGGCGGGGGGGGGCAGCGGGATCGCGGGCGGCCCAGCAGCGC
GCAGTCGGCCAAGTCGTCGTCTTCGAAGGTCGAGGAGGAGCTGTCGGTGC
TGAGGATCGGGGGGATGACGGGAGCAGACGGGCTTTCTTCGGGGGGAGAT
GGGGGCCCCGGCAGCGGGTTGCTGGACAGCGGGGAGCACCGGGGGAGGCA
GGACAGCAGCAGATCGCCGTTGCCGCACGAGAACGGGGCCGGTGGGGAGG
ACGATGCGAGCGTGCTGGACACTCCTCTTCAGGATAAGCACGGAGAGGGC
GATGGGGGCGCGTCCGGCGACGAGAAGGAGATGGAGGGGCTAGAAAAGTC
GTTCGAGGCCGGGGTAAAGCTGGCGAAGGGGCACCGAAGAGTCTGCTTGG
AGTGTTTCGCGCCGGAAGGAACCCCGATACAGCACGGAGAGGGCGATGGG
GGCGCGTCCGGCGACGAGAAGGAGATGGAGGGGCTAGAAAAGTCGTTCGA
GGCCGGGGTAAAGCTGGCGAAGGGGCACCGAAGAGTCTGCTTGGAGTGTT
TCGCGCCGGAAGGAACCCCGATACAGGGGAGTCGTTTCTTCGTGGGGAGG
GAAGGGGCTACTCTCGGGCGGCGGCAGACCAACACAATCGCCTTCTCGCA
CGACGCGGGCGGATCCGTCATGGGGATAGACGCATCCATATCGGGAGAGC
ACGCCAGGATCGTGTACGACGAGGACGGCGACTTTTTGCACATTATGGAC
GGCACCCCCACGAAGGGGAGTCGTTTCTTCGTGGGGAGGGAAGGGGCTAC
TCTCGGGCGGCGGCAGACCAACACAATCGCCTTCTCGCACGACGCGGGCG
GATCCGTCATGGGGATAGACGCATCCATATCGGGAGAGCACGCCAGGATC
GTGTACGACGAGGACGGCGACTTTTTGCACATTATGGACGGCACCCCCAC
GAAGCCGTCCACGAACGGGACCTGGTTCCGGCTGAGCGGCATGCACGCCG
AGAGCAGGCCGTACCCCTTGTCCAACGGCTCCGAGATCCTCATCGGAACG
CCGTCCACGAACGGGACCTGGTTCCGGCTGAGCGGCATGCACGCCGAGAG
CAGGCCGTACCCCTTGTCCAACGGCTCCGAGATCCTCATCGGAACGGTGC
GATTCTCGGTGGCCCTGGAGACGATGGTCGTCGAGAAGGAGCTCACCGCG
GACAACCGAAATCACTTCATGTCGCTCGCGAAGGACAGGAGCTCGCCGCC
GCGGGGAACAAGTAGAGAAAGCAGCGACCGCAACGGGAGGGGCCGGGGCA
CTGGGATTGGCCGGTGAGTGCGATTCTCGGTGGCCCTGGAGACGATGGTC
GTCGAGAAGGAGCTCACCGCGGACAACCGAAATCACTTCATGTCGCTCGC
GAAGGACAGGAGCTCGCCGCCGCGGGGAACAAGTAGAGAAAGCAGCGACC
GCAACGGGAGGGGCCGGGGCACTGGGATTGGCCGGTGA
back to top