mRNA_L-elsbetiae_contig17604.4972.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig17604.4972.1 vs. uniprot
Match: UPI0019633DF6 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Polypterus senegalus TaxID=55291 RepID=UPI0019633DF6) HSP 1 Score: 79.0 bits (193), Expect = 2.100e-14 Identity = 44/86 (51.16%), Postives = 57/86 (66.28%), Query Frame = 1 Query: 160 SAEQELRRFLAEEGLNDDDAQTATAELGWWCRHQFSFPSLARLAVKYLVIPPSSAASERVFSMAGNIVTKKRSRLGEDTIDALVFL 417 S E EL +L G + + T L WW +H+ SFPS+ARLA KYL IP +S++SER FS +GNI+T KRS L +T+D LVFL Sbjct: 90 SIELELSMYLQAPGPDSE-----TDPLEWWRQHELSFPSVARLAKKYLCIPATSSSSERAFSTSGNIITCKRSCLKPNTVDQLVFL 170
BLAST of mRNA_L-elsbetiae_contig17604.4972.1 vs. uniprot
Match: A0A8B8AXX2_CRAVI (zinc finger BED domain-containing protein 1-like n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8AXX2_CRAVI) HSP 1 Score: 82.8 bits (203), Expect = 2.600e-14 Identity = 39/68 (57.35%), Postives = 49/68 (72.06%), Query Frame = 1 Query: 238 LGWWCRHQFSFPSLARLAVKYLVIPPSSAASERVFSMAGNIVTKKRSRLGEDTIDALVFLNGSHGLSW 441 L WW +HQ+ FP L+ LA KYL IP SS SERVFS+AGN+V KKRSR+ D +D+L+FL + L W Sbjct: 594 LEWWKKHQYMFPRLSILAKKYLGIPASSVPSERVFSLAGNLVNKKRSRMKPDLVDSLIFLKMNMDLYW 661
BLAST of mRNA_L-elsbetiae_contig17604.4972.1 vs. uniprot
Match: UPI001E1DA5D0 (E3 SUMO-protein ligase ZBED1-like isoform X1 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DA5D0) HSP 1 Score: 82.0 bits (201), Expect = 3.520e-14 Identity = 45/92 (48.91%), Postives = 59/92 (64.13%), Query Frame = 1 Query: 166 EQELRRFLAEEGLNDDDAQTATAELGWWCRHQFSFPSLARLAVKYLVIPPSSAASERVFSMAGNIVTKKRSRLGEDTIDALVFLNGSHGLSW 441 EQE+ R+LA N D + + L WW ++Q+ +P LA LA KYL IP SS SERVFS+AG++V KKRSRL D I+ L+FL + W Sbjct: 351 EQEIERYLAS---NRDADDSKLSLLQWWEKNQYVYPRLAVLAKKYLAIPASSVPSERVFSLAGSLVNKKRSRLNPDLINKLIFLKMNMDQYW 439
BLAST of mRNA_L-elsbetiae_contig17604.4972.1 vs. uniprot
Match: UPI001E1DEB19 (E3 SUMO-protein ligase ZBED1-like n=2 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DEB19) HSP 1 Score: 82.0 bits (201), Expect = 4.790e-14 Identity = 45/92 (48.91%), Postives = 59/92 (64.13%), Query Frame = 1 Query: 166 EQELRRFLAEEGLNDDDAQTATAELGWWCRHQFSFPSLARLAVKYLVIPPSSAASERVFSMAGNIVTKKRSRLGEDTIDALVFLNGSHGLSW 441 EQE+ R+LA N D + + L WW ++Q+ +P LA LA KYL IP SS SERVFS+AG++V KKRSRL D I+ L+FL + W Sbjct: 590 EQEIERYLAS---NRDADDSKLSLLQWWEKNQYVYPRLAVLAKKYLAIPASSVPSERVFSLAGSLVNKKRSRLNPDLINKLIFLKMNMDQYW 678
BLAST of mRNA_L-elsbetiae_contig17604.4972.1 vs. uniprot
Match: A0A8B8BQU3_CRAVI (zinc finger BED domain-containing protein 4-like n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8BQU3_CRAVI) HSP 1 Score: 79.7 bits (195), Expect = 1.470e-13 Identity = 38/68 (55.88%), Postives = 48/68 (70.59%), Query Frame = 1 Query: 238 LGWWCRHQFSFPSLARLAVKYLVIPPSSAASERVFSMAGNIVTKKRSRLGEDTIDALVFLNGSHGLSW 441 L WW +HQ+ FP L+ LA KYL IP SS SERVFS+AGN+V KKRSR+ +D+L+FL + L W Sbjct: 287 LEWWKKHQYMFPRLSILAKKYLGIPASSVPSERVFSLAGNLVNKKRSRMKPALVDSLIFLEMNMDLYW 354
BLAST of mRNA_L-elsbetiae_contig17604.4972.1 vs. uniprot
Match: UPI001965CF0A (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Polypterus senegalus TaxID=55291 RepID=UPI001965CF0A) HSP 1 Score: 80.1 bits (196), Expect = 1.970e-13 Identity = 39/65 (60.00%), Postives = 49/65 (75.38%), Query Frame = 1 Query: 223 TATAELGWWCRHQFSFPSLARLAVKYLVIPPSSAASERVFSMAGNIVTKKRSRLGEDTIDALVFL 417 T T L WW +H+ SFPS+ARLA KYL IP +S++SER FS +GNI+T KRS L +T+D LVFL Sbjct: 480 TETDPLEWWRQHELSFPSVARLAKKYLCIPATSSSSERAFSASGNIITCKRSCLKPNTVDQLVFL 544
BLAST of mRNA_L-elsbetiae_contig17604.4972.1 vs. uniprot
Match: UPI000DF4C649 (zinc finger BED domain-containing protein 1-like n=1 Tax=Oreochromis niloticus TaxID=8128 RepID=UPI000DF4C649) HSP 1 Score: 77.4 bits (189), Expect = 2.750e-13 Identity = 42/86 (48.84%), Postives = 57/86 (66.28%), Query Frame = 1 Query: 160 SAEQELRRFLAEEGLNDDDAQTATAELGWWCRHQFSFPSLARLAVKYLVIPPSSAASERVFSMAGNIVTKKRSRLGEDTIDALVFL 417 S E EL +L G + + T L WW H+ +FP +ARLA KYL IP +S++SER FS +GNI+T+KRS L ++T+D LVFL Sbjct: 157 SIELELSMYLQTPGPDSE-----TDPLEWWKHHETNFPLVARLAKKYLCIPATSSSSERAFSASGNIITRKRSCLKQNTVDQLVFL 237
BLAST of mRNA_L-elsbetiae_contig17604.4972.1 vs. uniprot
Match: UPI0014900218 (zinc finger BED domain-containing protein 1-like n=1 Tax=Notolabrus celidotus TaxID=1203425 RepID=UPI0014900218) HSP 1 Score: 77.8 bits (190), Expect = 3.870e-13 Identity = 37/60 (61.67%), Postives = 46/60 (76.67%), Query Frame = 1 Query: 238 LGWWCRHQFSFPSLARLAVKYLVIPPSSAASERVFSMAGNIVTKKRSRLGEDTIDALVFL 417 L WW +H+ +FPSLARLA KYL IP +S++SER FS +GNIVT KRSRL + +D L FL Sbjct: 227 LEWWKQHELNFPSLARLAKKYLCIPATSSSSERAFSASGNIVTCKRSRLKPERVDQLTFL 286
BLAST of mRNA_L-elsbetiae_contig17604.4972.1 vs. uniprot
Match: A0A0A1WMC4_ZEUCU (Putative AC9 transposase n=1 Tax=Zeugodacus cucurbitae TaxID=28588 RepID=A0A0A1WMC4_ZEUCU) HSP 1 Score: 75.1 bits (183), Expect = 4.080e-13 Identity = 33/59 (55.93%), Postives = 46/59 (77.97%), Query Frame = 1 Query: 244 WWCRHQFSFPSLARLAVKYLVIPPSSAASERVFSMAGNIVTKKRSRLGEDTIDALVFLN 420 WW + +P L++LA K L IP SSAASERVFS+AGNI+T+KR+R+ T+D+++FLN Sbjct: 94 WWLNNNKRYPRLSKLAEKVLAIPASSAASERVFSLAGNIITEKRNRIAPKTVDSILFLN 152
BLAST of mRNA_L-elsbetiae_contig17604.4972.1 vs. uniprot
Match: A0A7D9LZM0_PARCT (Zinc finger BED domain-containing 6-like n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9LZM0_PARCT) HSP 1 Score: 72.4 bits (176), Expect = 3.340e-12 Identity = 44/89 (49.44%), Postives = 54/89 (60.67%), Query Frame = 1 Query: 160 SAEQELRRFLAEEGL--NDDDAQTATAELG-WWCRHQFSFPSLARLAVKYLVIPPSSAASERVFSMAGNIVTKKRSRLGEDTIDALVFL 417 S QE+ +L+E L D + ELG +W RH+ +PSL RLA+ YL PPSS SERVFS+AGNIVTKKR L I L F+ Sbjct: 55 SKSQEISAYLSEPVLPVRSPDGKANLEELGGYWYRHKNLWPSLTRLALSYLSCPPSSVTSERVFSLAGNIVTKKRCALLPGNIGKLAFI 143 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17604.4972.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig17604.4972.1 >prot_L-elsbetiae_contig17604.4972.1 ID=prot_L-elsbetiae_contig17604.4972.1|Name=mRNA_L-elsbetiae_contig17604.4972.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=171bp MEGEAVSAGPQGPACVHCVPYPGCSAMGSGDAQPQQISNARSPARLSLEAback to top mRNA from alignment at L-elsbetiae_contig17604:22..3317+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig17604.4972.1 ID=mRNA_L-elsbetiae_contig17604.4972.1|Name=mRNA_L-elsbetiae_contig17604.4972.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3296bp|location=Sequence derived from alignment at L-elsbetiae_contig17604:22..3317+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig17604:22..3317+ >mRNA_L-elsbetiae_contig17604.4972.1 ID=mRNA_L-elsbetiae_contig17604.4972.1|Name=mRNA_L-elsbetiae_contig17604.4972.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1026bp|location=Sequence derived from alignment at L-elsbetiae_contig17604:22..3317+ (Laminarionema elsbetiae ELsaHSoW15)back to top |