mRNA_L-elsbetiae_contig1752.4932.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1752.4932.1
Unique NamemRNA_L-elsbetiae_contig1752.4932.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1752.4932.1 vs. uniprot
Match: D7G7V9_ECTSI (Selenoprotein O n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7V9_ECTSI)

HSP 1 Score: 781 bits (2018), Expect = 3.800e-274
Identity = 441/754 (58.49%), Postives = 511/754 (67.77%), Query Frame = 1
Query:  109 RSMRFARTGS-AGLLGISPQQSHQHVPVLYRVRPTRASSSLQASNLGASK-TQATGKWPWVFKYPGRCVDLPAEEVFSGFEGLLLDDVSDTDSHEEDDRAYSKVSREVRNACYTFVCLDTAPAPELVILSEAAAEITGLPLGTARAGRRRGGEAQ---------QVSLGLTGSNLEVFEGVQPSPYSSNYGGHQFGNWAGQLGDGRVCTLGEIQPAEGFAWMGR------------GSLMEIQLKGIGQTPFSRGGDGKAGEEQVSRFIGACLREFLFSEAFSGLGLPAALAVSVCSTGEDATIRDSDPKNSGALKRARGAVLCRAAPSFLRFGSFELPARRGDVELVRKLARYCLRHLGPYLDLSL------SKDE---------------------------VKPNEEGDPKDDYLGLLVAIIEATARMVAGWQALGFCHGVLNTDNFTLLGLALDFGPCSFMEKYDPSWSPNEGDSSLRYAFQNQPDVSAWNCERLAEAFSSIIGVSGVARANEAFSPAFDAAYTTSLERKFGLFGMRLGSGWMHPSRSGGGAAGATTA----DAQFVLEYFRLMSACRVDFTDTWRALLDVPALPAARKTQQRSGAPVHPGTDGTEERGGSGCAGGTREDGLCDSDREALRPLLSVLTAAGASNEQMRQWAAWVHDYSSRIDRQGIGKAHPDSENEGRTARLEIMRKSSPAFVLRADSLEQAVKAAEMDDMSLMYRLEERLSRAYKTERREQAATRQSIE 2190
            R  RF R+       G++    H  VP+L R R      +  +S+ G        G+WPWV + PGRC DLPAEEVF+GF+GL  DD     S   +  +YSKVSREVRNACY FV LD+AP P++VILS+ AA +TG+PL    A RR    A+         QV+L LTG+     EG QP  +SS+YGGHQFGNWAGQLGDGRV TLGEI  ++G + +GR            G L+EIQLKGIGQTPFSRGGDGKA        +GACLREFLFSEAF GLGLPAA+AVSVCS+GE ATIRDSDPKN G  KRARGAVLCR APSFLRFGSFELPARRGDV LVRKLA YCLRHL P+ + SL      S DE                            + N+E   ++DY+ LLVAI++ATARMVAGWQA+GFCHGVLNTDNFTLLGL LDFGPCSFME YDP+WSPNEGDS+LRYAF+NQPDVSAWNCERLAEAFS I+GVSGVA AN AFSPAFDAAYT  L++K GL GM LGSGW+HP RSG   AG        DAQFVL +F LM+ACR DFT+TWRALLDVPAL  ARK ++            TE    +G      ED +C+ D E LRPL SVL AAGAS+   +QWA W+ DYSSRID QGIG  HP+   EGR  RL IMR S+P FVLR  SLEQA+KAAE  D++L+++LEERLSR Y  +R E+  TRQ  E
Sbjct:   19 RRFRFGRSLVWVAFAGLTRAFVHTSVPLLLRPRSDPGCFARVSSHSGDENFASLEGRWPWVCERPGRCADLPAEEVFTGFDGLFDDDTDQDASGTSE--SYSKVSREVRNACYAFVSLDSAPDPKVVILSKTAAALTGIPLEFVGATRRENQGAEGAFPPCQLKQVALALTGT--VGLEGAQP--FSSSYGGHQFGNWAGQLGDGRVATLGEIL-SDGQSEIGRVAGKEHVAGKNLGGLVEIQLKGIGQTPFSRGGDGKA-------VLGACLREFLFSEAFLGLGLPAAVAVSVCSSGESATIRDSDPKNGGTFKRARGAVLCRTAPSFLRFGSFELPARRGDVTLVRKLADYCLRHLSPHFESSLLAHATGSGDERTREFLTSGKDLGIGRNEEDGQAQGNGKESNQEMGARNDYVELLVAIVQATARMVAGWQAMGFCHGVLNTDNFTLLGLGLDFGPCSFMEAYDPTWSPNEGDSALRYAFRNQPDVSAWNCERLAEAFSPIVGVSGVAEANAAFSPAFDAAYTVHLQKKLGLSGMDLGSGWIHPRRSGDAPAGEMQEKLPPDAQFVLSFFDLMAACRTDFTETWRALLDVPALSVARKARRNLT---------TEHLEATGV-----EDDICNDDEETLRPLSSVLNAAGASSTARKQWATWIRDYSSRIDSQGIGNGHPEGGEEGRKERLAIMRSSNPVFVLRKKSLEQALKAAETGDLTLVHQLEERLSRTYTGDRNEEGVTRQPPE 744          
BLAST of mRNA_L-elsbetiae_contig1752.4932.1 vs. uniprot
Match: A0A6U0QSG3_9VIRI (Selenoprotein O n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A6U0QSG3_9VIRI)

HSP 1 Score: 273 bits (698), Expect = 4.720e-79
Identity = 212/587 (36.12%), Postives = 291/587 (49.57%), Query Frame = 1
Query:  415 SREVRNACYTFVCLDTAPAPELVILSEAAAEITGLPLGTARAGRRRGGEAQQVSLGLTGSNLEVFEGVQPSPYSSNYGGHQFGNWAGQLGDGRVCTLGEIQPAEGFAWMGR-----GSLMEIQLKGIGQTPFSRGGDGKAGEEQVSRFIGACLREFLFSEAFSGLGLPAALAVSVCSTGEDATIRDSDPKNSGALKRARGAVLCRAAPSFLRFGSFELPARRGDVELVRKLARYCLRHLGPYLDLSLSKDEVKPNEEGDPKDDYLGLLVAIIEATARMVAGWQALGFCHGVLNTDNFTLLGLALDFGPCSFMEKYDPSWSPNEGDSSLRYAFQNQPDVSAWNCERLAEAFSSIIGVSGVA---RANEAFSPAFDAAYTTSLERKFGLFGMRLGSGWMHPSRSGGGAAGATTADAQFVLEYFRLMSACRVDFTDTWRALLDV-PALPAARKTQQRSGAPVHPGTDGTEERGGSGCAGGTREDGLCDSDREALRPLLSVLTAAGASNEQMRQWAAWVHDYSSRIDRQGIGKAHPDS-ENEGRTARLEIMRKSSPAFVLRADSLEQAVKAAEMDDMSLMYRLEERLSRAY 2145
            +R+V  A YT V    A AP  + +S AA E+ GL        R    EA   ++ L GS           PY++ YGGHQFG WAGQLGDGR  +LG ++   G A  G      G L+E+QLKG G TP+SR  DG+A        + + LREF+ SEA   LG+P   A+S+ +TG D  +RD     +  L+   GAV+CR APSF+RFGSFELPA R D  L+R +A + +    P+L            EEG  ++ Y   L  +  ++AR+ A WQ++GF HGVLNTDN ++ G+ +DFGP +FME +DP+++PN  DS+ RY+F  QP++ A NC RLA A   ++G    A   RA + F   F  ++   L +K GL     G                   D Q  +  F LM+  R D+T+TWR L  V   + AA    Q   A    G D     G              D   EA       + AAG          AW+  Y  RI       A  D+   E R A   +MR SSP +V R   +++A++AAE  D+  + RL E ++R Y
Sbjct:   37 TRQVFGAAYTRVRPTPASAPRTLGVSAAACELIGLDPDEGT--RPEFAEAFAGNIVLAGSE----------PYANCYGGHQFGTWAGQLGDGRAISLGSVRGPVGAAAAGADSGGAGGLVELQLKGAGLTPYSRRADGRA-------VLRSSLREFVGSEAMHALGVPTTRALSLVATG-DGVLRDMFYNGNARLEP--GAVVCRMAPSFVRFGSFELPAARKDEALMRAIADHVIAQHFPHL---------AAVEEG--RERYGAWLDEVTASSARLAARWQSVGFTHGVLNTDNMSVHGVTIDFGPYAFMEAFDPNFTPNSSDSTRRYSFGAQPNIVAENCVRLAMALEPLLGADKAANTERAADVFERTFYESWHDELRKKLGLGRFVEGR------------------DDQLAVGLFTLMARARADYTNTWRLLARVGEGMSAAEAFDQIRPALGAHGLDFVSLEG--------------DDINEANEDPAEQVEAAGV---------AWMARYLDRI-------AEDDALSGEERAA---LMRASSPKYVPRNHLMQRAIEAAEAGDVGPLDRLMEVMTRPY 539          
BLAST of mRNA_L-elsbetiae_contig1752.4932.1 vs. uniprot
Match: A0A1Y1IEC0_KLENI (Selenoprotein O n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IEC0_KLENI)

HSP 1 Score: 268 bits (685), Expect = 2.370e-76
Identity = 189/539 (35.06%), Postives = 261/539 (48.42%), Query Frame = 1
Query:  559 EAQQVSLGLTGSNLE------VFEGVQPSP----YSSNYGGHQFGNWAGQLGDGRVCTLGEIQPAEGFAWMGRGSLMEIQLKGIGQTPFSRGGDGKAGEEQVSRFIGACLREFLFSEAFSGLGLPAALAVSVCSTGEDA---TIRDSDPKNSGALKRARGAVLCRAAPSFLRFGSFELPARRGDVE--LVRKLARYCLRHLGPYLDLSLSKD-----EVKPNEEGDPK---DDYLGLLVAIIEATARMVAGWQALGFCHGVLNTDNFTLLGLALDFGPCSFMEKYDPSWSPNEGDSSLRYAFQNQPDVSAWNCERLAEAF--SSIIGVSGVARANEAFSPAFDAAYTTSLERKFGLFGMRLGSGWMHPSRSGGGAAGATTADAQFVLEYFRLMSACRVDFTDTWRALLDVPALPAARKTQQRSGAPVHPGTDGTEERGGSGCAGGTREDGLCDSDREALRPLLSVLTAAGASNEQMRQWAAWVHDYSSRIDRQGIGKAHPDSENEGRTARLEIMRKSSPAFVLRADSLEQAVKAAEMDD 2100
            +A +  LGL    LE      +F G         Y+ NYGGHQFG+WAGQLGDGR  TLGE+    G  W       E+QLKG G+TP+SR  DG+A        + + +REFL SE   GLG+P   A+++ +TG         D DPK         GAV+CR APSF+RFG+F+LPA RG+ E  LV++LA Y ++H  P+L+   + +     E   + EG P    + Y  L   + E TAR+ A WQ +GF HGVLNTDN ++LGL +D+GP +F++ +D  ++PN  D + RYAF NQPDV  WN  +LA AF    ++          A+  AF   Y   +  K GL                         DA      F+LM    VDFT+ +RAL DV                    T G +E+  S              + E L PL  VL      +E+   WA W+  Y  ++   G      DS+++    R + M + +P +VLR   L+ A+ AAE  D
Sbjct:  156 DAAKELLGLDPEELERPEAPLIFSGAARMEGSVTYAQNYGGHQFGSWAGQLGDGRAITLGELLNPRGERW-------ELQLKGAGKTPYSRHADGQA-------VLRSSVREFLCSETMHGLGVPTTRALTLVTTGRGVWRDMFYDGDPKQEP------GAVVCRIAPSFVRFGTFQLPASRGEAERPLVKQLADYVIKHHYPHLERGEAAERDAGAEASSSGEGAPAGGYNKYGALFKEVAERTARLAAKWQGVGFAHGVLNTDNMSILGLTIDYGPFAFVDAFDDQFTPNTSDPTRRYAFGNQPDVILWNMVQLANAFIEGELLTTPEAQELLPAYPLAFGTEYRALMAAKMGL----------------------PEYDADLTTTMFQLMKRDSVDFTNHFRALGDV--------------------TTGLDEQSAS--------------EEELLAPLEGVL----GRSEKRSDWADWMRAYLGKLKDAG------DSDSD----RKKAMNRVNPRYVLRNYMLQNAIAAAETGD 604          
BLAST of mRNA_L-elsbetiae_contig1752.4932.1 vs. uniprot
Match: A0A250XBN3_9CHLO (Selenoprotein O n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XBN3_9CHLO)

HSP 1 Score: 265 bits (676), Expect = 4.920e-76
Identity = 207/596 (34.73%), Postives = 285/596 (47.82%), Query Frame = 1
Query:  394 DRAYSKVSREVRNACYTFVCLDTAPA---PELVILSEAAAEITGLPLGTARAGRRRGGEAQQVSLGLTGSNLEVFEGVQP----SPYSSNYGGHQFGNWAGQLGDGRVCTLGEIQPAEGFAWMGRGSLMEIQLKGIGQTPFSRGGDGKAGEEQVSRFIGACLREFLFSEAFSGLGLPAALAVSVCSTGEDATIRDSDPKNSGALKRARGAVLCRAAPSFLRFGSFELPARRG--DVELVRKLARYCLRHLGPYLDLSLSKDEVKPNEEGDPKDDYLGLLVAIIEATARMVAGWQALGFCHGVLNTDNFTLLGLALDFGPCSFMEKYDPSWSPNEGD-SSLRYAFQNQPDVSAWNCERLAEAF--SSIIGVSGVARANEAFSPAFDAAYTTSLERKFGLFGMRLGSGWMHPSRSGGGAAGATTADAQFVLEYFRLMSACRVDFTDTWRALLDVPALPAARKTQQRSGAPVHPGTDGTEERGGSGCAGGTREDGLCDSDREALRPLLSVLTAAGASNEQMRQWAAWVHDYSSRIDRQGIGKAHPDSENEGRTARLEIMRKSSPAFVLRADSLEQAVKAAEMDDMSLMYRLEERLSRAY 2145
            D   S   R+VR + Y+ V  +  PA   P LV  SE   E+    LG          EA +    L      VF G  P     PY+  YGGHQFGNWAGQLGDGR  TLGEI   +G  W       E+QLKG GQTP+SR  DG+A    V R   + +REF+ SEA   LG+P   A+S+  TG D  +RD      G  K   GAV+CR APSF+RFG+F+LPA RG  D++LV+  A Y ++H   +L+    K              Y+  L  +   TA++V+ WQA+GF HGVLNTDN ++LGL +D+GP  FM+K+D  ++PN  D    RYA++NQP++  WNC  LA A   + ++G      A +A+       Y   +  K GL                       + D   V+E F+LM     DFT+T+RAL                G+     +DGT  +       G    GL    R A+  +L+      A  EQ   W  W+  Y +++  +G     PD E +     +      +P FV R   L+ AV+ AE  D + + +L + L R Y
Sbjct:   35 DAEKSNTIRQVRGSLYSRV--NPTPAAGEPSLVTFSE---EVCSQLLGLDPV------EASRPEFAL------VFGGAAPLPGSEPYAQCYGGHQFGNWAGQLGDGRAITLGEILNQQGNRW-------ELQLKGAGQTPYSRRADGRA----VMR---SSVREFVASEAMHYLGVPTTRALSLVGTG-DKVLRDLF--YDGNAKFEPGAVVCRVAPSFVRFGTFQLPASRGGDDMKLVKMTADYVIKHHYGHLENESQK--------------YVAFLKEVTVRTAKLVSWWQAVGFVHGVLNTDNMSILGLTVDYGPYGFMDKFDLMYTPNMTDFQGRRYAYRNQPEIGLWNCVMLANALYAADLLGQEEAQEAVDAYGQTLQTEYNGRMAAKLGLL----------------------SYDRDLVVELFKLMYEDEADFTNTFRAL----------------GSVTSTSSDGTSHKDQ-----GVTTSGLTPQLRTAVNKILT------ADREQA--WERWLTQYRNKLKAEG----RPDQERQAAQDAV------NPKFVPRQHLLQYAVEGAEAGDPTEINQLMKVLRRPY 521          
BLAST of mRNA_L-elsbetiae_contig1752.4932.1 vs. uniprot
Match: A0A2K8L174_9PROT (Protein adenylyltransferase SelO n=1 Tax=Mariprofundus ferrinatatus TaxID=1921087 RepID=A0A2K8L174_9PROT)

HSP 1 Score: 263 bits (672), Expect = 1.100e-75
Identity = 192/584 (32.88%), Postives = 279/584 (47.77%), Query Frame = 1
Query:  415 SREVRNACYTFVCLDTAPAPELVILSEAAAEITGLPLGTARAGRRRGGEAQQVSLGLTGSNLEVFEG--VQPS--PYSSNYGGHQFGNWAGQLGDGRVCTLGEIQPAEGFAWMGRGSLMEIQLKGIGQTPFSRGGDGKAGEEQVSRFIGACLREFLFSEAFSGLGLPAALAVSVCSTGEDATIRDSDPKNSGALKRARGAVLCRAAPSFLRFGSFELPARRGDVELVRKLARYCLRHLGPYLDLSLSKDEVKPNEEGDPKDDYLGLLVAIIEATARMVAGWQALGFCHGVLNTDNFTLLGLALDFGPCSFMEKYDPSWSPNEGDSSLR-YAFQNQPDVSAWNCERLAEAFSSIIG-VSGVARANEAFSPAFDAAYTTSLERKFGLFGMRLGSGWMHPSRSGGGAAGATTADAQFVLEYFRLMSACRVDFTDTWRALLDVPALPAARKTQQRSGAPVHPGTDGTEERGGSGCAGGTREDGLCDSDREALRPLLSVLTAAGASNEQMR-QWAAWVHDYSSRIDRQGIGKAHPDSENEGRTARLEIMRKSSPAFVLRADSLEQAVKAAEMDDMSLMYRLEERLSRAY 2145
            +R+V  ACY+FV      AP L+  ++  AE+ G+   + +            S+  T    E+F G  + P+  PY+S YGGHQFG+WAGQLGDGR   +GE+  A+G  W        +QLKG G TP+SR  DG A        + + LREFL SEA   LG+P   A+S+ +TGE   +RD     +G      GAVLCR APSF RFG+F+L A RG++EL++KL  Y +  L  +  +      V           YL     +   TA ++  W  +GF HGV+NTDN ++LGL +D+GP  ++E YDP W+PN  DS +R Y F NQP ++ WN  RLAEA   + G V  + +A + +S  ++  + + +  K GL                   +  T  D   + E   ++     D T  +R L D+                                   T  D    SD + + PLL      GA +E  R ++A+W+ +Y +R+ RQG G A           R + M   +P +VLR    +QA+  AE  D S+++ L   L R Y
Sbjct:   27 TRQVTGACYSFVQPTAVKAPALLACADEVAELLGISKESCK------------SVKFT----ELFSGNRLLPAMVPYASCYGGHQFGHWAGQLGDGRAINIGEVINAKGERW-------SLQLKGAGLTPYSRNADGLA-------VLRSSLREFLCSEAMFHLGVPTTRALSLITTGEG-VLRDI--LYNGNAGYEPGAVLCRVAPSFTRFGNFQLFAARGEIELLQKLLDYTI--LTDFPGIGAPAPAV-----------YLAWFEEVCRRTAELMVHWMRVGFVHGVMNTDNMSVLGLTIDYGPYGWLEGYDPEWTPNITDSEMRRYRFGNQPQIAGWNLARLAEALIPLTGSVEQLQQAMQVYSTTYENGWFSMMGDKLGL-------------------SKITREDEPLIRELLGILPLVETDMTIFFRKLADIE----------------------------------TGHDPELRSDEQLIAPLLDAYYDLGALDESYRTRFASWMRNYITRLCRQGSGDAE----------RRQKMHAVNPKYVLRNYLAQQAIDRAESGDSSMIHELLNLLRRPY 501          
BLAST of mRNA_L-elsbetiae_contig1752.4932.1 vs. uniprot
Match: A0A835YET8_9CHLO (Selenoprotein O n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835YET8_9CHLO)

HSP 1 Score: 265 bits (676), Expect = 1.600e-75
Identity = 201/588 (34.18%), Postives = 281/588 (47.79%), Query Frame = 1
Query:  406 SKVSREVRNACYTFVCLDTAP--APELVILSEAAAEITGLPLGTARAGRRRGGEAQQVSLGLTGSNLEVFEGVQPSPYSSNYGGHQFGNWAGQLGDGRVCTLGEI-QPAEGFAWMGRGSLMEIQLKGIGQTPFSRGGDGKAGEEQVSRFIGACLREFLFSEAFSGLGLPAALAVSVCSTGEDATIRDSDPKNSGALKRARGAVLCRAAPSFLRFGSFELPARRG--DVELVRKLARYCLRHLGPYLDLSLSKDEVKPNEEGDPKDDYLGLLVAIIEATARMVAGWQALGFCHGVLNTDNFTLLGLALDFGPCSFMEKYDPSWSPNEGDSS-LRYAFQNQPDVSAWNCERLAEAF--SSIIGVSGVARANEAFSPAFDAAYTTSLERKFGLFGMRLGSGWMHPSRSGGGAAGATTADAQFVLEYFRLMSACRVDFTDTWRALLDVPALPAARKTQQRSGAPVHPGTDGTEERGGSGCAGGTREDGLCDSDREALRPLLSVLTAAGASNEQMRQWAAWVHDYSSRIDRQGIGKAHPDSENEGRTARLEIMRKSSPAFVLRADSLEQAVKAAEMDDMSLMYRLEERLSRAY 2145
            + V R+V  A ++ V   T P  AP L+  S   A + GL             E  +    L  S      G   +PY++ YGGHQFG WAGQLGDGR  TLGE+   A+G  W       E+QLKG G+TP+SR  DG+A        + + LREF+ SEA + LG+P   A+S+  TG D+ +RD     +G  K   GAV+CR APSF+RFG+F+LP  RG  +V L +  A + L++  P     LS        E DP   YL +L  + + TAR+VA WQ+LGF HGVLNTDN ++LGL +D+GP  +++K+DP W+PN  D+S  RY+F+NQP+   +N   LA AF  + ++   G  +    +S      Y   +  K GL                      T+ DA     + RL+     D+T+ WRAL DV +                   DG E     G  G         +D E +            S E + +W+ W+  Y +R+   G     PD E +         R +SP FV R   L+ A+ AAE  D + +  L E L R Y
Sbjct:   89 TNVVRQVEGALFSRVS-PTPPDGAPYLICFSPQVARMVGLDPT----------ECARPEFPLVMSGAAPLPGA--APYAAVYGGHQFGQWAGQLGDGRAITLGEVVNAADGSRW-------ELQLKGAGKTPYSRRADGRA-------VLRSSLREFVASEAMAALGVPTTRALSLVGTG-DSVLRDMF--YNGNAKLEPGAVVCRVAPSFVRFGTFQLPVSRGAGEVPLSKMAADWVLKYHYPQF---LS--------EADP---YLAMLREVTQRTARLVAAWQSLGFVHGVLNTDNMSILGLTIDYGPFGWLDKFDPDWTPNLTDASGRRYSFRNQPEAVQFNLVMLANAFLAADLVPREGAEKVLYEYSELLSDTYQARIAAKLGL----------------------TSYDAALAEPFMRLLYDSAADWTNAWRALADVRSA------------------DGAEAEAAGGVPGMPPSLAAALNDGEQM------------SEEGVAEWSQWLQAYRARLRADG----RPDPERQA------AQRLASPKFVPRQHLLQYAITAAEAGDFAELEALLEVLERPY 570          
BLAST of mRNA_L-elsbetiae_contig1752.4932.1 vs. uniprot
Match: A0A6D2JJH4_9BRAS (Selenoprotein O n=19 Tax=Brassicaceae TaxID=3700 RepID=A0A6D2JJH4_9BRAS)

HSP 1 Score: 265 bits (676), Expect = 3.320e-75
Identity = 197/591 (33.33%), Postives = 282/591 (47.72%), Query Frame = 1
Query:  412 VSREVRNACYTFVCLDTA-PAPELVILSEAAAEITGLPLGTARAGRRRGGEAQQVSLGLTGSNLEVFEGVQPSPYSSNYGGHQFGNWAGQLGDGRVCTLGEIQPAEGFAWMGRGSLMEIQLKGIGQTPFSRGGDGKAGEEQVSRFIGACLREFLFSEAFSGLGLPAALAVSVCSTGEDATIRDSDPKNSGALKRARGAVLCRAAPSFLRFGSFELPARRG--DVELVRKLARYCLRHLGPYLDLSLSKDEV--KPNEEGDPKDD-----YLGLLVAIIEATARMVAGWQALGFCHGVLNTDNFTLLGLALDFGPCSFMEKYDPSWSPNEGD-SSLRYAFQNQPDVSAWNCERLAE--AFSSIIGVSGVARANEAFSPAFDAAYTTSLERKFGLFGMRLGSGWMHPSRSGGGAAGATTADAQFVLEYFRLMSACRVDFTDTWRALLDVPALPAARKTQQRSGAPVHPGTDGTEERGGSGCAGGTREDGLCDSDREALRPLLSVLTAAGASNEQMRQWAAWVHDYSSRIDRQGIGKAHPDSENEGRTARLEIMRKSSPAFVLRADSLEQAVKAAEMDDMSLMYRLEERLSRAY 2145
            +SREV +ACYT V    A   P+LV  S++ AEI  L             E ++    L  S  + F G  P  Y+  YGGHQFG WAGQLGDGR  TLGE+  ++G  W       E+QLKG G+TP+SR  DG A        + + +REFL SE+   LG+P   A+ + +TG+D T    D    G  K   GA++CR + SFLRFGS+++ A RG  D+E+VRKLA Y +RH  P+++     D +  K  +EGD   D     Y   +V I E TA +VA WQ +GF HGVLNTDN ++LG  +D+GP  F++ +DPS++PN  D    RY F NQPD+  WN  + ++  A + +I       A E +   F   Y   + +K GL                      +  + + + +    M+  +VD+T+ +R L +V A P                               T ED       E L+PL + L   G   E+   W  WV  Y   +    I        +E R A ++ +   +P ++LR    + A+ AAE  D S +  L   + R Y
Sbjct:  114 ISREVLHACYTKVSPSVAVDDPQLVAWSDSVAEILDLDPK----------EFERPDFSLILSGAKPFPGSMP--YAQCYGGHQFGMWAGQLGDGRAITLGEVLNSKGERW-------ELQLKGAGRTPYSRFADGLA-------VLRSSIREFLCSESMHYLGIPTTRALCLLTTGKDVT---RDMFYDGNPKEEPGAIVCRVSQSFLRFGSYQIHASRGKEDLEIVRKLADYAIRHHFPHIESMNRSDSLSFKTGDEGDSVVDLTSNKYAAWIVEIAERTATLVARWQGVGFTHGVLNTDNMSILGQTIDYGPFGFLDAFDPSYTPNTTDLPGRRYCFANQPDIGLWNIAQFSKTLAVAQLIDQKEANYAMERYGDKFMDEYQAIMSKKLGL----------------------SKYNKEIISKLLNNMAVDKVDYTNFFRLLSNVKANPD------------------------------TPED-------ELLKPLKAALLDIG--KERKEAWIKWVRGYIQEVGGSEIS-------DEERKAGMDSV---NPKYILRNYLCQSAIDAAEQGDFSEVNNLIRLMKRPY 604          
BLAST of mRNA_L-elsbetiae_contig1752.4932.1 vs. uniprot
Match: A0A8J4D7G6_9CHLO (Selenoprotein O n=3 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4D7G6_9CHLO)

HSP 1 Score: 265 bits (677), Expect = 5.690e-75
Identity = 200/584 (34.25%), Postives = 281/584 (48.12%), Query Frame = 1
Query:  418 REVRNACYTFVCLDTAPA--PELVILSEAAAEITGLPLGTARAGRRRGGEAQQVSLGLTGSNLEVFEGVQPSPYSSNYGGHQFGNWAGQLGDGRVCTLGEI-QPAEGFAWMGRGSLMEIQLKGIGQTPFSRGGDGKAGEEQVSRFIGACLREFLFSEAFSGLGLPAALAVSVCSTGEDATIRDSDPKNSGALKRARGAVLCRAAPSFLRFGSFELPARRG--DVELVRKLARYCLRHLGPYLDLSLSKDEVKPNEEGDPKDDYLGLLVAIIEATARMVAGWQALGFCHGVLNTDNFTLLGLALDFGPCSFMEKYDPSWSPNEGDSS-LRYAFQNQPDVSAWNCERLAEAF--SSIIGVSGVARANEAFSPAFDAAYTTSLERKFGLFGMRLGSGWMHPSRSGGGAAGATTADAQFVLEYFRLMSACRVDFTDTWRALLDVPALPAARKTQQRSGAPVHPGTDGTEERGGSGCAGGTREDGLCDSDREALRPLLSVLTAAGASNEQMRQWAAWVHDYSSRIDRQGIGKAHPDSENEGRTARLEIMRKSSPAFVLRADSLEQAVKAAEMDDMSLMYRLEERLSRAY 2145
            R+V  A ++ V   T PA  P L+  S   A++ GL             E ++    L  S      G +   Y+++YGGHQFG WAGQLGDGR  TLGE+  P  G  W       E+QLKG G+TP+SR  DG+A        + + LRE++ SEA + LG+P   A+S+  TGE   +RD     +G  +   GAV+CR APSF+RFGSF+LP  RG  +V LV+  A + +++  P L  S                 YL LL  +I  T R+VA WQALGF HGVLNTDN ++LGL +D+GP  F++K+DP W+PN  D+S  RY+++NQP+   +N   L  A   + ++   G   A   +S      Y   +  K GL                         D     E  RLM     DFT+T+RAL  V +L    + QQ+      PG+ G+E R GSG  G         +  + LRP            E++  W  W+  Y + +   G+    PD++ +         R   P F+ R   L+ A++AAE  D S +  L E L R Y
Sbjct:  153 RQVEGALFSLVS-PTPPAGVPYLISYSSQVAQLVGLDPT----------ECERPEFPLLMSGAAPLPGSRS--YAASYGGHQFGVWAGQLGDGRAITLGEVVNPVSGQRW-------ELQLKGAGKTPYSRRADGRA-------VLRSSLREYVCSEAMAALGVPTTRALSLVGTGEP-VLRDMF--YNGNARWEPGAVVCRVAPSFVRFGSFQLPVTRGAGEVGLVKLAADWLMKYHYPELAAS--------------PQPYLALLREVIHRTGRLVADWQALGFVHGVLNTDNMSILGLTIDYGPFGFLDKFDPDWTPNLTDASGRRYSYRNQPEAVQFNLIMLGNALLAADLVTREGAEEALGEYSKVLSNLYNARMAAKLGLH----------------------EYDMALSHELMRLMYDDDADFTNTFRALCSVSSLDEEGEQQQQQ-----PGSSGSESRPGSGSPGLPAALSASLNGGQPLRP------------ERVAAWRQWLQAYRASLRADGV----PDAQRQA------AQRAVCPKFIPRQHLLQWAIEAAEKGDYSELEALMEVLERPY 643          
BLAST of mRNA_L-elsbetiae_contig1752.4932.1 vs. uniprot
Match: A0A5N5NZV4_9ROSI (Selenoprotein O n=8 Tax=Saliceae TaxID=238069 RepID=A0A5N5NZV4_9ROSI)

HSP 1 Score: 263 bits (671), Expect = 2.300e-74
Identity = 199/593 (33.56%), Postives = 283/593 (47.72%), Query Frame = 1
Query:  412 VSREVRNACYTFVCLDTAPA--PELVILSEAAAEITGLPLGTARAGRRRGGEAQQVSLGLTGSNLEVFEGVQPSPYSSNYGGHQFGNWAGQLGDGRVCTLGEIQPAEGFAWMGRGSLMEIQLKGIGQTPFSRGGDGKAGEEQVSRFIGACLREFLFSEAFSGLGLPAALAVSVCSTGEDATIRDSDPKNSGALKRARGAVLCRAAPSFLRFGSFELPARRG--DVELVRKLARYCLRHLGPYLDLSLSKDEVKPNEEGDP--------KDDYLGLLVAIIEATARMVAGWQALGFCHGVLNTDNFTLLGLALDFGPCSFMEKYDPSWSPNEGD-SSLRYAFQNQPDVSAWNCERLAEAFSS--IIGVSGVARANEAFSPAFDAAYTTSLERKFGLFGMRLGSGWMHPSRSGGGAAGATTADAQFVLEYFRLMSACRVDFTDTWRALLDVPALPAARKTQQRSGAPVHPGTDGTEERGGSGCAGGTREDGLCDSDREALRPLLSVLTAAGASNEQMRQWAAWVHDYSSRIDRQGIGKAHPDSENEGRTARLEIMRKSSPAFVLRADSLEQAVKAAEMDDMSLMYRLEERLSRAY 2145
            + R+V +ACYT V L +A    PELV  S++ A++  L L           E ++    L  S      G  P  Y+  YGGHQFG WAGQLGDGR  TLGE+  ++   W       E+QLKG G+TP+SR  DG A        + + +REFL SEA   LG+P   A+S+ +TG++ T    D    G  K   GA++CR APSFLRFGS+++ A RG  D+E+VR LA Y +RH  P+++ +++K E      GD          + Y    V I E TA M+A WQ +GF HGV+NTDN ++LGL +D+GP  F++ +DPS++PN  D    RY F NQPD+  WN  +     S+  +I       A E +   F   Y   + RK GL                         + Q + +    M+  +VD+T+ +R L +V A P                                 ED       E L PL +VL   G   E+   W +WV  Y   +   GI        +E R A+++ +   +P +VLR    + A+ AAE  D S + RL + + R Y
Sbjct:  127 IPRQVMHACYTKV-LPSAEVENPELVAWSDSVADLFDLDLK----------EFERPDFPLLFSGASPLVGALP--YAQCYGGHQFGMWAGQLGDGRAITLGEVVNSKSERW-------ELQLKGAGRTPYSRFADGLA-------VLRSSIREFLCSEAMHSLGIPTTRALSLVTTGKNVT---RDMFYDGNAKEEPGAIVCRVAPSFLRFGSYQIHASRGKEDLEIVRALADYAIRHHFPHIE-NMNKSEGLSFSTGDEDHSVVDLTSNKYAAWTVEIAERTASMIASWQGVGFTHGVMNTDNMSILGLTIDYGPFGFLDAFDPSFTPNTTDLPGRRYCFANQPDIGLWNIAQFTATLSTAKLIDNKEADYAMERYGNKFMDEYQAMMTRKLGL----------------------PKYNKQLISKLLNNMAVDKVDYTNFFRLLSNVKADP------------------------------NIPED-------ELLVPLKAVLLDIG--QERKEAWISWVQTYVHELAASGIS-------DEQRKAQMDSV---NPKYVLRNYLCQTAIDAAEQGDYSEVRRLLKLMERPY 617          
BLAST of mRNA_L-elsbetiae_contig1752.4932.1 vs. uniprot
Match: UPI00198D244E (YdiU family protein n=1 Tax=Methylotenera sp. TaxID=2051956 RepID=UPI00198D244E)

HSP 1 Score: 259 bits (663), Expect = 2.740e-74
Identity = 194/575 (33.74%), Postives = 281/575 (48.87%), Query Frame = 1
Query:  415 SREVRNACYTFVCLDTAPAPELVILSEAAAEITGLPLGTARAGRRRGGEAQQVSLGLTGSNLEVFEGVQPS--PYSSNYGGHQFGNWAGQLGDGRVCTLGE-IQPAEGFAWMGRGSLMEIQLKGIGQTPFSRGGDGKAGEEQVSRFIGACLREFLFSEAFSGLGLPAALAVSVCSTGEDATIRDSDPKNSGALKRARGAVLCRAAPSFLRFGSFELPARRGDVELVRKLARYCLRHLGPYLDLSLSKDEVKPNEEGDPKDDYLGLLVAIIEATARMVAGWQALGFCHGVLNTDNFTLLGLALDFGPCSFMEKYDPSWSPNEGDSS-LRYAFQNQPDVSAWNCERLAEAFSSIIGVSGVARAN-EAFSPAFDAAYTTSLERKFGLFGMRLGSGWMHPSRSGGGAAGATTADAQFVLEYFRLMSACRVDFTDTWRALLDVPALPAARKTQQRSGAPVHPGTDGTEERGGSGCAGGTREDGLCDSDREALRPLLSVLTAAGASNEQMRQWAAWVHDYSSRIDRQGIGKAHPDSENEG-RTARLEIMRKSSPAFVLRADSLEQAVKAAEMDDMSLMYRL 2121
            +R V+   Y+ V       P+L+  S++ A   G+   T    R         S+ + G NL     V P+  P+++ YGGHQFG+WAGQLGDGR  TLGE + P +G          E QLKG G TP+SR  DG+A        + + +REFL SEA   LG+P   A+S+ +TG DA +RD      G  K   GA++CR APSFLRFG+FE+ A  G++ L++KL  + +    P LDL  S             D Y  LL  +   TA M++ W  +GF HGV+NTDN ++LGL +D+GP  ++E YDP+W+PN  D+   RY + NQP ++ WN  RLAEA   +I     A A+ E +   F  AY  +L +K GL  +                   + AD + VLE F L+     D T  +R L D P           +G P                AG   E  L    RE ++P          +N  + +W +W   YS+R+      ++  +++  G +  R  +M+  +P +VLR    + A+ AAE  D S++ RL
Sbjct:   29 TRTVQEVSYSSVQPTPVRNPQLLGWSDSLAAELGISKPTLEDRR---------SVEILGGNL-----VLPTMKPHAARYGGHQFGHWAGQLGDGRAITLGEALTPGKG--------RFEYQLKGAGPTPYSRRADGRA-------VLRSSVREFLCSEAMHFLGVPTTRALSLVTTG-DAVVRDMF--YDGNAKPEPGAIVCRVAPSFLRFGNFEILASSGEIPLLKKLTDFLITDHYPELDLRDS-------------DVYGKLLDEVSRRTAFMISEWMRVGFVHGVMNTDNMSVLGLTIDYGPYGWLEPYDPNWTPNTTDAQGRRYRYGNQPSIALWNLSRLAEALLPLIQDQARALASLELYKTTFQEAYAKTLAKKLGLSSIE------------------SEADQKLVLELFELLQGSEADMTLFFRRLCDWP-----------TGVPA---------------AGPAGEKELEADFRELIQPTFYT------TNFSLPKWVSWFTRYSARV------RSEVEAQGAGMKPTRSALMKSVNPKYVLRNYLAQNAITAAEKGDPSVLERL 502          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1752.4932.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7V9_ECTSI3.800e-27458.49Selenoprotein O n=2 Tax=Ectocarpus TaxID=2879 RepI... [more]
A0A6U0QSG3_9VIRI4.720e-7936.12Selenoprotein O n=1 Tax=Prasinoderma coloniale Tax... [more]
A0A1Y1IEC0_KLENI2.370e-7635.06Selenoprotein O n=1 Tax=Klebsormidium nitens TaxID... [more]
A0A250XBN3_9CHLO4.920e-7634.73Selenoprotein O n=1 Tax=Chlamydomonas eustigma Tax... [more]
A0A2K8L174_9PROT1.100e-7532.88Protein adenylyltransferase SelO n=1 Tax=Mariprofu... [more]
A0A835YET8_9CHLO1.600e-7534.18Selenoprotein O n=1 Tax=Edaphochlamys debaryana Ta... [more]
A0A6D2JJH4_9BRAS3.320e-7533.33Selenoprotein O n=19 Tax=Brassicaceae TaxID=3700 R... [more]
A0A8J4D7G6_9CHLO5.690e-7534.25Selenoprotein O n=3 Tax=Volvox reticuliferus TaxID... [more]
A0A5N5NZV4_9ROSI2.300e-7433.56Selenoprotein O n=8 Tax=Saliceae TaxID=238069 RepI... [more]
UPI00198D244E2.740e-7433.74YdiU family protein n=1 Tax=Methylotenera sp. TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1752contigL-elsbetiae_contig1752:4419..9040 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score788.1
Seed ortholog evalue3.5e-225
Seed eggNOG ortholog2880.D7G7V9
Preferred nameSELO
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Uncharacterized ACR, YdiU/UPF0061 family
EggNOG OGsCOG0397@1,KOG2542@2759
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons9
Model size2205
Cds size2205
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815729.8460379-CDS-L-elsbetiae_contig1752:4418..45251622815729.8460379-CDS-L-elsbetiae_contig1752:4418..4525Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1752 4419..4525 -
1691683065.0791473-CDS-L-elsbetiae_contig1752:4418..45251691683065.0791473-CDS-L-elsbetiae_contig1752:4418..4525Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1752 4419..4525 -
1622815729.8557665-CDS-L-elsbetiae_contig1752:4684..53201622815729.8557665-CDS-L-elsbetiae_contig1752:4684..5320Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1752 4685..5320 -
1691683065.1000907-CDS-L-elsbetiae_contig1752:4684..53201691683065.1000907-CDS-L-elsbetiae_contig1752:4684..5320Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1752 4685..5320 -
1622815729.86589-CDS-L-elsbetiae_contig1752:5608..57421622815729.86589-CDS-L-elsbetiae_contig1752:5608..5742Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1752 5609..5742 -
1691683065.1117334-CDS-L-elsbetiae_contig1752:5608..57421691683065.1117334-CDS-L-elsbetiae_contig1752:5608..5742Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1752 5609..5742 -
1622815729.8753479-CDS-L-elsbetiae_contig1752:5906..60161622815729.8753479-CDS-L-elsbetiae_contig1752:5906..6016Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1752 5907..6016 -
1691683065.1277666-CDS-L-elsbetiae_contig1752:5906..60161691683065.1277666-CDS-L-elsbetiae_contig1752:5906..6016Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1752 5907..6016 -
1622815729.884723-CDS-L-elsbetiae_contig1752:6336..66751622815729.884723-CDS-L-elsbetiae_contig1752:6336..6675Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1752 6337..6675 -
1691683065.1394496-CDS-L-elsbetiae_contig1752:6336..66751691683065.1394496-CDS-L-elsbetiae_contig1752:6336..6675Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1752 6337..6675 -
1622815729.895603-CDS-L-elsbetiae_contig1752:6840..68781622815729.895603-CDS-L-elsbetiae_contig1752:6840..6878Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1752 6841..6878 -
1691683065.1486413-CDS-L-elsbetiae_contig1752:6840..68781691683065.1486413-CDS-L-elsbetiae_contig1752:6840..6878Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1752 6841..6878 -
1622815729.9058564-CDS-L-elsbetiae_contig1752:7040..71191622815729.9058564-CDS-L-elsbetiae_contig1752:7040..7119Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1752 7041..7119 -
1691683065.1582358-CDS-L-elsbetiae_contig1752:7040..71191691683065.1582358-CDS-L-elsbetiae_contig1752:7040..7119Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1752 7041..7119 -
1622815729.9171176-CDS-L-elsbetiae_contig1752:8118..84691622815729.9171176-CDS-L-elsbetiae_contig1752:8118..8469Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1752 8119..8469 -
1691683065.1725452-CDS-L-elsbetiae_contig1752:8118..84691691683065.1725452-CDS-L-elsbetiae_contig1752:8118..8469Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1752 8119..8469 -
1622815729.9293408-CDS-L-elsbetiae_contig1752:8629..90401622815729.9293408-CDS-L-elsbetiae_contig1752:8629..9040Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1752 8630..9040 -
1691683065.1853213-CDS-L-elsbetiae_contig1752:8629..90401691683065.1853213-CDS-L-elsbetiae_contig1752:8629..9040Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1752 8630..9040 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1752.4932.1prot_L-elsbetiae_contig1752.4932.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1752 4419..9040 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1752.4932.1

>prot_L-elsbetiae_contig1752.4932.1 ID=prot_L-elsbetiae_contig1752.4932.1|Name=mRNA_L-elsbetiae_contig1752.4932.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=735bp
PHQACFDTAVCVYVPGFDKDKTPCSRPLVTHKACEDRSMRFARTGSAGLL
GISPQQSHQHVPVLYRVRPTRASSSLQASNLGASKTQATGKWPWVFKYPG
RCVDLPAEEVFSGFEGLLLDDVSDTDSHEEDDRAYSKVSREVRNACYTFV
CLDTAPAPELVILSEAAAEITGLPLGTARAGRRRGGEAQQVSLGLTGSNL
EVFEGVQPSPYSSNYGGHQFGNWAGQLGDGRVCTLGEIQPAEGFAWMGRG
SLMEIQLKGIGQTPFSRGGDGKAGEEQVSRFIGACLREFLFSEAFSGLGL
PAALAVSVCSTGEDATIRDSDPKNSGALKRARGAVLCRAAPSFLRFGSFE
LPARRGDVELVRKLARYCLRHLGPYLDLSLSKDEVKPNEEGDPKDDYLGL
LVAIIEATARMVAGWQALGFCHGVLNTDNFTLLGLALDFGPCSFMEKYDP
SWSPNEGDSSLRYAFQNQPDVSAWNCERLAEAFSSIIGVSGVARANEAFS
PAFDAAYTTSLERKFGLFGMRLGSGWMHPSRSGGGAAGATTADAQFVLEY
FRLMSACRVDFTDTWRALLDVPALPAARKTQQRSGAPVHPGTDGTEERGG
SGCAGGTREDGLCDSDREALRPLLSVLTAAGASNEQMRQWAAWVHDYSSR
IDRQGIGKAHPDSENEGRTARLEIMRKSSPAFVLRADSLEQAVKAAEMDD
MSLMYRLEERLSRAYKTERREQAATRQSIEQHAT*
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mRNA from alignment at L-elsbetiae_contig1752:4419..9040-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1752.4932.1 ID=mRNA_L-elsbetiae_contig1752.4932.1|Name=mRNA_L-elsbetiae_contig1752.4932.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4622bp|location=Sequence derived from alignment at L-elsbetiae_contig1752:4419..9040- (Laminarionema elsbetiae ELsaHSoW15)
CCGCATCAGGCCTGCTTTGATACTGCCGTATGCGTATATGTTCCGGGTTT TGACAAGGATAAGACACCTTGCTCTCGGCCGCTGGTCACACACAAGGCCT GCGAGGACCGCTCCATGAGGTTCGCTCGTACCGGCAGCGCGGGACTGTTG GGTATATCTCCACAACAATCACATCAACATGTCCCGGTGCTTTACCGTGT TCGACCCACACGTGCTTCTTCATCGCTCCAGGCTTCGAATCTTGGCGCAT CTAAGACGCAAGCAACAGGGAAGTGGCCTTGGGTGTTCAAATATCCCGGG AGGTGTGTTGACCTCCCCGCGGAGGAAGTGTTTTCAGGGTTCGAAGGACT GCTGTTGGACGACGTGAGCGACACAGACAGCCATGAGGAGGATGACCGGG CGTACAGCAAGGTACGTGTTTCGCTTATACCAAGTGTGTGTGTTTTCGTA GACGTATTTCGTAAGGTTGGACGGTGCGGGACGTTATGCGGACAGCTAGG CACTGCTGTAAACGCGCCGGTGCATGCATCTACATACATAGTCTACTGTC TTCGCTGCTGCTCTCGAACAGGTATCGCGGGAAGTGAGAAACGCATGCTA TACCTTTGTGTGTCTTGATACGGCACCAGCTCCGGAGCTGGTTATTCTCA GCGAAGCCGCAGCTGAGATCACAGGATTACCTCTTGGAACCGCACGAGCC GGGAGAAGGAGAGGGGGGGAAGCGCAGCAAGTTAGTCTGGGTCTCACAGG CAGCAATCTCGAAGTATTCGAGGGTGTACAGCCATCGCCTTACTCGTCCA ACTACGGCGGGCATCAGTTCGGAAATTGGGCGGGTCAGCTGGGAGACGGG CGCGTTTGTACATTGGGAGAGATCCAGCCTGCAGAAGGATTCGCATGGAT GGGACGGGGAAGCTTGATGGAGGTGAGGCATGTCTTTGGGCCTCGGTACT GCAAAGAAAACGTTTCGTAGATTTAAGGTAGGCCACGATCAGTGGCCCGG TAGCGTCCCCTGCTTTACTGCACAACCTGGAATAATTTTTTTATCTTGGT TATAGACACAGCAAGTTGTCGAAATGCCCGATAATTTTCAAAAAATGGCG CGCCATCTCCTTGGCCTCGAGGTTAAGAGATATGTCGAAGGGCATCCCAA AAGAGTGCCATAGCCGGAGGGCAGGCTTCAAACAGATCCTTGTGCTTCGA GTGGCGGTGTGACAAAAGAGTACTTTAAGCCTGCTGTAAAAATGCGGCCT AAATTCGACCTCAGCCTATGGCGGTGCACACCACGACTCTCATGCCCAAC CAGAGGCTACGACGAGACACAGGTGTACTTGAATAGTACCTTGGAGCAAT CTCTGGCGTTCTCAGCAGCGGTGGCAGCCCCGTTTTGAAATGGCAGCGAC GTTGGCCATGTCGAGAGCTCTACAGCGGTCGAATATGGTTTTATACAAGG AACGGAGGGCAGCAAAGGCTCTACAGCACCGCTGAAGAAACGGAGGCCAC GCGATGGTAGCTGTTGTCCTTGGCTTTCGATAAATATGTTAACCTACTGG CCAAGGAGAACGCGTGGCATTTTAAATTGCGATGGCGCTTAGTGCAAAAT TGAAAAGAGGCCAAAAACACAGTTGCGCCGCAAGTAACCGCCGTTTTTTT TTTGAAAGACCGACAAGCTGCTGACCACGTCAGCTTTGGCCGGGTGCGGA CCACAAAACACAACATGCCTCTTCGCCTTTTCTGGGGTTTGGCCTTTTTC CCTTAGCCACGTGATCGTGGCCAACCTTAAAAGACCCACAAGACAGGGTT TAATAAAATGGCACGGAGACAGAAGCCATTATCTGAACTGTGTGACTTTG CCTTTTGACGCTACACACCTATTTGCGACACGCTACCGTACTCCTGGTGC ACTGCGATAAAAATCACCCAGATTCAGCTCAAGGGAATCGGGCAGACGCC GTTCTCCAGAGGGGGTGACGGCAAAGCAGGCGAGGAACAAGTTTCTCGAT GTTTGCTGTCTTGTCTCTGAGGAGAAAACAAAAGAGTGCTGAATGCCAGT TCTCGCTCGCATTCTTCATCACGCGCACCACCATCTCCTTTTGCTCGCTC ATCTAATTTTGATTTCGTCTCGCTCGCGACTTCCCTGCTCATTCGGACTC GGGTTCCTGAAGTCATTGGAGCATGCCTGCGCGAGTTCTTGTTCAGCGAG GTACGGTGCTTGAGTTGATGTTTCAGTTGAATTAGCTTCATTTCCCTGAG GCGCCCTTCTGGGTCCCTGCCCGTGTAAGTCGCTTGTTTTCCAACGATCT TTGACTGAAGCTCCACGTCCCACTCGGTATATAACCTCTGCCTTGCTACC GCTGCTGAAATCCAGGCATTCTCAGGTCTTGGTCTCCCTGCGGCCTTAGC GGTGTCTGTCTGCTCGACCGGAGAAGATGCCACGATCAGAGACTCTGACC CGAAAAATAGCGGGGCGCTCAAACGTGCACGCGGTGCGGTTCTTTGCCGT GCGGCACCTAGCTTTCTGCGCTTCGGGTCGTTTGAGTTACCGGCGAGGAG GGGTGATGTTGAGCTGGTCAGAAAGTTGGCTCGTTATTGCCTCCGTCATC TCGGGCCGTATCTTGACCTGAGTCTATCCAAAGACGAAGTTAAGCCGAAC GAGGAAGGAGACCCGAAAGACGACTACCTGGGGCTGCTCGTGGCCATCAT TGAGGTGGGTCCCACAACGTTGAGCGTGCAATATTCCTCAAGGCTTAAAC GCCAGCAACGGCATGATGGCTGGTCGTGTCGCTTTGTCAACGAAGACACT CTCAGAGCTGCGGCGCCTTCTCATCCGGTGTGCTGCGTGTACTACGAACT GTATACCTAGACGGAGAGAGTAGACGCTCTTGGGTCGCAGGTAGCGTGGC CAGGATTGCGATGAAAACATGCCTATTGCTTACTTCGGATCGTTTCTCCT GATCGACAAACAGCTACAGGACAAATGACAACCCCGCTTCACCACCCATC CTGCTCCCCCAACGTTACGTGCAGGCGACAGCCAGAATGGTGGCCGGCTG GCAGGCGCTAGGATTTTGCCACGGCGTTCTTAACACCGATAACTTTACTC TTCTTGGCCTTGCCCTTGATTTCGGACCTTGCAGGTGAGCAAGTGCGCAG GATTTTCTTTTTGAACTTGCCTGCGTTGACAATACGGCTGTCGGCTTTGG ATGTATTGCGAAGAGAGGCGAGGTGCGCGAAGCACGGTCTGTCCTGTTCA TCCACTTGTTAATTTTACTCTCTGATTGTGTCGCACGTTGTCTTCCAGCT TCATGGAAAAGTACGATCCTTCTTGGTCTCCGAATGAAGGCGACTCGTCA CTGCGGTACGCGTTTCAAAACCAACCGGATGTATCCGCGTGGAACTGCGA ACGCCTCGCAGAGGCGTTCTCTTCCATCATAGGTGAGGTCGCGAGACGCA CTCCGTTTGTACCCGCAATCCCCATTTGTTACTCGGCCTGGGTCTGTTCA ATATTGTCTGTGGCTATACGTACCGATGCCGGGTAGGACGTCTCATCAGA CGAAGGATGTGTGCTACGTAGTCTGTATATTTTGAAACATGACTGCAATG CACGTCGCACGTAATCCTACTAAATAGAGGTTTTTGTTTGTGCGCGTGGG CGCATTCAACCGAATATAATACCGCGGACGAACGAACTATGTGCGAACGC CGTTTATGCACTTTTCGCAGGGGTGTCAGGAGTTGCTCGAGCCAACGAGG CCTTCTCGCCCGCTTTTGACGCCGCCTACACCACTAGTCTGGAGCGCAAA TTTGGACTCTTCGGCATGAGATTGGGGAGTGGATGGATGCACCCGTCCCG GAGCGGGGGCGGGGCGGCTGGGGCTACTACAGCGGACGCACAGTTCGTTC TGGAGTATTTTAGGCTAATGTCAGCCTGTCGGGTGGACTTCACAGACACG TGGCGAGCTTTGCTCGACGTCCCCGCTCTGCCTGCTGCGCGCAAAACACA ACAACGTTCGGGAGCACCTGTGCACCCAGGAACCGATGGCACAGAGGAGA GAGGAGGAAGCGGTTGTGCCGGTGGCACCCGAGAGGACGGCCTCTGCGAC AGCGACAGAGAAGCACTGCGCCCCTTGCTCTCCGTGCTGACGGCCGCCGG AGCCTCGAACGAGCAAATGCGGCAGTGGGCTGCCTGGGTCCACGATTACA GCTCACGAATCGACAGACAGGGGATTGGAAAAGCTCACCCGGACAGCGAG AATGAAGGGCGGACGGCAAGACTTGAGATCATGCGGAAAAGCAGCCCTGC TTTTGTTCTTCGGGCGGATAGCTTAGAGCAAGCCGTGAAAGCAGCCGAGA TGGATGGTGAGTGAGCAAACTGCAGCAGTGGTCGAGATTTGCTTCGACGT CTGCATTTACGCCTTTTTTGTGACCGCATCTGTTCTCGCCGATTTTGGAA CCAATTCGTAAAGATCTAAAACCACATGCGGGCAACGCTCGATACGATTC CGTTGTATTGCGCAGATATGTCGCTGATGTATCGACTTGAGGAGCGCTTA TCCAGGGCGTACAAGACAGAGCGAAGAGAACAAGCGGCTACACGGCAGTC GATAGAACAGCACGCGACATAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1752:4419..9040-

>mRNA_L-elsbetiae_contig1752.4932.1 ID=mRNA_L-elsbetiae_contig1752.4932.1|Name=mRNA_L-elsbetiae_contig1752.4932.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4410bp|location=Sequence derived from alignment at L-elsbetiae_contig1752:4419..9040- (Laminarionema elsbetiae ELsaHSoW15)
CCGCATCAGGCCTGCTTTGATACTGCCGTATGCGTATATGTTCCGGGTTT
TGACAAGGATAAGACACCTTGCTCTCGGCCGCTGGTCACACACAAGGCCT
GCGAGGACCGCTCCATGAGGTTCGCTCGTACCGGCAGCGCGGGACTGTTG
GGTATATCTCCACAACAATCACATCAACATGTCCCGGTGCTTTACCGTGT
TCGACCCACACGTGCTTCTTCATCGCTCCAGGCTTCGAATCTTGGCGCAT
CTAAGACGCAAGCAACAGGGAAGTGGCCTTGGGTGTTCAAATATCCCGGG
AGGTGTGTTGACCTCCCCGCGGAGGAAGTGTTTTCAGGGTTCGAAGGACT
GCTGTTGGACGACGTGAGCGACACAGACAGCCATGAGGAGGATGACCGGG
CGTACAGCAAGCCGCATCAGGCCTGCTTTGATACTGCCGTATGCGTATAT
GTTCCGGGTTTTGACAAGGATAAGACACCTTGCTCTCGGCCGCTGGTCAC
ACACAAGGCCTGCGAGGACCGCTCCATGAGGTTCGCTCGTACCGGCAGCG
CGGGACTGTTGGGTATATCTCCACAACAATCACATCAACATGTCCCGGTG
CTTTACCGTGTTCGACCCACACGTGCTTCTTCATCGCTCCAGGCTTCGAA
TCTTGGCGCATCTAAGACGCAAGCAACAGGGAAGTGGCCTTGGGTGTTCA
AATATCCCGGGAGGTGTGTTGACCTCCCCGCGGAGGAAGTGTTTTCAGGG
TTCGAAGGACTGCTGTTGGACGACGTGAGCGACACAGACAGCCATGAGGA
GGATGACCGGGCGTACAGCAAGGTATCGCGGGAAGTGAGAAACGCATGCT
ATACCTTTGTGTGTCTTGATACGGCACCAGCTCCGGAGCTGGTTATTCTC
AGCGAAGCCGCAGCTGAGATCACAGGATTACCTCTTGGAACCGCACGAGC
CGGGAGAAGGAGAGGGGGGGAAGCGCAGCAAGTTAGTCTGGGTCTCACAG
GCAGCAATCTCGAAGTATTCGAGGGTGTACAGCCATCGCCTTACTCGTCC
AACTACGGCGGGCATCAGTTCGGAAATTGGGCGGGTCAGCTGGGAGACGG
GCGCGTTTGTACATTGGGAGAGATCCAGCCTGCAGAAGGATTCGCATGGA
TGGGACGGGGAAGCTTGATGGAGGTATCGCGGGAAGTGAGAAACGCATGC
TATACCTTTGTGTGTCTTGATACGGCACCAGCTCCGGAGCTGGTTATTCT
CAGCGAAGCCGCAGCTGAGATCACAGGATTACCTCTTGGAACCGCACGAG
CCGGGAGAAGGAGAGGGGGGGAAGCGCAGCAAGTTAGTCTGGGTCTCACA
GGCAGCAATCTCGAAGTATTCGAGGGTGTACAGCCATCGCCTTACTCGTC
CAACTACGGCGGGCATCAGTTCGGAAATTGGGCGGGTCAGCTGGGAGACG
GGCGCGTTTGTACATTGGGAGAGATCCAGCCTGCAGAAGGATTCGCATGG
ATGGGACGGGGAAGCTTGATGGAGATTCAGCTCAAGGGAATCGGGCAGAC
GCCGTTCTCCAGAGGGGGTGACGGCAAAGCAGGCGAGGAACAAGTTTCTC
GATATTCAGCTCAAGGGAATCGGGCAGACGCCGTTCTCCAGAGGGGGTGA
CGGCAAAGCAGGCGAGGAACAAGTTTCTCGATTCATTGGAGCATGCCTGC
GCGAGTTCTTGTTCAGCGAGTCATTGGAGCATGCCTGCGCGAGTTCTTGT
TCAGCGAGGCATTCTCAGGTCTTGGTCTCCCTGCGGCCTTAGCGGTGTCT
GTCTGCTCGACCGGAGAAGATGCCACGATCAGAGACTCTGACCCGAAAAA
TAGCGGGGCGCTCAAACGTGCACGCGGTGCGGTTCTTTGCCGTGCGGCAC
CTAGCTTTCTGCGCTTCGGGTCGTTTGAGTTACCGGCGAGGAGGGGTGAT
GTTGAGCTGGTCAGAAAGTTGGCTCGTTATTGCCTCCGTCATCTCGGGCC
GTATCTTGACCTGAGTCTATCCAAAGACGAAGTTAAGCCGAACGAGGAAG
GAGACCCGAAAGACGACTACCTGGGGCTGCTCGTGGCCATCATTGAGGCA
TTCTCAGGTCTTGGTCTCCCTGCGGCCTTAGCGGTGTCTGTCTGCTCGAC
CGGAGAAGATGCCACGATCAGAGACTCTGACCCGAAAAATAGCGGGGCGC
TCAAACGTGCACGCGGTGCGGTTCTTTGCCGTGCGGCACCTAGCTTTCTG
CGCTTCGGGTCGTTTGAGTTACCGGCGAGGAGGGGTGATGTTGAGCTGGT
CAGAAAGTTGGCTCGTTATTGCCTCCGTCATCTCGGGCCGTATCTTGACC
TGAGTCTATCCAAAGACGAAGTTAAGCCGAACGAGGAAGGAGACCCGAAA
GACGACTACCTGGGGCTGCTCGTGGCCATCATTGAGGCGACAGCCAGAAT
GGTGGCCGGCTGGCAGGCGCTAGGATTTTGCCACGGCGTTCTTAACACCG
ATAACTTTACTCTTCTTGGCCTTGCCCTTGATTTCGGACCTTGCAGGCGA
CAGCCAGAATGGTGGCCGGCTGGCAGGCGCTAGGATTTTGCCACGGCGTT
CTTAACACCGATAACTTTACTCTTCTTGGCCTTGCCCTTGATTTCGGACC
TTGCAGCTTCATGGAAAAGTACGATCCTTCTTGGTCTCCGAATGAAGGCG
ACTCGTCACTGCGGTACGCGTTTCAAAACCAACCGGATGTATCCGCGTGG
AACTGCGAACGCCTCGCAGAGGCGTTCTCTTCCATCATAGCTTCATGGAA
AAGTACGATCCTTCTTGGTCTCCGAATGAAGGCGACTCGTCACTGCGGTA
CGCGTTTCAAAACCAACCGGATGTATCCGCGTGGAACTGCGAACGCCTCG
CAGAGGCGTTCTCTTCCATCATAGGGGTGTCAGGAGTTGCTCGAGCCAAC
GAGGCCTTCTCGCCCGCTTTTGACGCCGCCTACACCACTAGTCTGGAGCG
CAAATTTGGACTCTTCGGCATGAGATTGGGGAGTGGATGGATGCACCCGT
CCCGGAGCGGGGGCGGGGCGGCTGGGGCTACTACAGCGGACGCACAGTTC
GTTCTGGAGTATTTTAGGCTAATGTCAGCCTGTCGGGTGGACTTCACAGA
CACGTGGCGAGCTTTGCTCGACGTCCCCGCTCTGCCTGCTGCGCGCAAAA
CACAACAACGTTCGGGAGCACCTGTGCACCCAGGAACCGATGGCACAGAG
GAGAGAGGAGGAAGCGGTTGTGCCGGTGGCACCCGAGAGGACGGCCTCTG
CGACAGCGACAGAGAAGCACTGCGCCCCTTGCTCTCCGTGCTGACGGCCG
CCGGAGCCTCGAACGAGCAAATGCGGCAGTGGGCTGCCTGGGTCCACGAT
TACAGCTCACGAATCGACAGACAGGGGATTGGAAAAGCTCACCCGGACAG
CGAGAATGAAGGGCGGACGGCAAGACTTGAGATCATGCGGAAAAGCAGCC
CTGCTTTTGTTCTTCGGGCGGATAGCTTAGAGCAAGCCGTGAAAGCAGCC
GAGATGGATGGGGTGTCAGGAGTTGCTCGAGCCAACGAGGCCTTCTCGCC
CGCTTTTGACGCCGCCTACACCACTAGTCTGGAGCGCAAATTTGGACTCT
TCGGCATGAGATTGGGGAGTGGATGGATGCACCCGTCCCGGAGCGGGGGC
GGGGCGGCTGGGGCTACTACAGCGGACGCACAGTTCGTTCTGGAGTATTT
TAGGCTAATGTCAGCCTGTCGGGTGGACTTCACAGACACGTGGCGAGCTT
TGCTCGACGTCCCCGCTCTGCCTGCTGCGCGCAAAACACAACAACGTTCG
GGAGCACCTGTGCACCCAGGAACCGATGGCACAGAGGAGAGAGGAGGAAG
CGGTTGTGCCGGTGGCACCCGAGAGGACGGCCTCTGCGACAGCGACAGAG
AAGCACTGCGCCCCTTGCTCTCCGTGCTGACGGCCGCCGGAGCCTCGAAC
GAGCAAATGCGGCAGTGGGCTGCCTGGGTCCACGATTACAGCTCACGAAT
CGACAGACAGGGGATTGGAAAAGCTCACCCGGACAGCGAGAATGAAGGGC
GGACGGCAAGACTTGAGATCATGCGGAAAAGCAGCCCTGCTTTTGTTCTT
CGGGCGGATAGCTTAGAGCAAGCCGTGAAAGCAGCCGAGATGGATGATAT
GTCGCTGATGTATCGACTTGAGGAGCGCTTATCCAGGGCGTACAAGACAG
AGCGAAGAGAACAAGCGGCTACACGGCAGTCGATAGAACAGCACGCGACA
TAGATATGTCGCTGATGTATCGACTTGAGGAGCGCTTATCCAGGGCGTAC
AAGACAGAGCGAAGAGAACAAGCGGCTACACGGCAGTCGATAGAACAGCA
CGCGACATAG
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