mRNA_L-elsbetiae_contig175.4925.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig175.4925.1 vs. uniprot
Match: A0A6H5K678_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K678_9PHAE) HSP 1 Score: 98.6 bits (244), Expect = 3.500e-20 Identity = 63/155 (40.65%), Postives = 83/155 (53.55%), Query Frame = 1 Query: 169 LRGSCDFCTKRKRKCDGDGVNRCSFCIAKNQPECHYSVRLL-----TGPRADSAGRRAASK--ALAPGKAAKA-----TXXXXXXXXXXXXXXXGGPVSEHRYPAVLPLKRARLSPSPATGLIGLRENVYIGEFFRTMGFLPFTTES--KGMLIS 591 L+ SCDFC KR+++CDG RCSFCI K +PECHYS+R L T ++G A + + +PG + +A G + VLP KRARLS SPATGL GL EN +G+FF +GFL TES +G ++S Sbjct: 100 LKKSCDFCFKRRKRCDGRAQRRCSFCIEKGRPECHYSMRSLPSKSKTPTVVPTSGEEDAVRDDSPSPGLSLRARAEVDNDANADTGAQHTAKKKGSGTAVGVTGLVLPFKRARLSASPATGLAGLLENELLGDFFGCLGFLSLATESIIRGAMVS 254
BLAST of mRNA_L-elsbetiae_contig175.4925.1 vs. uniprot
Match: D7FTE0_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTE0_ECTSI) HSP 1 Score: 89.7 bits (221), Expect = 4.140e-17 Identity = 69/173 (39.88%), Postives = 87/173 (50.29%), Query Frame = 1 Query: 109 SLAKPAASQMPTGAAV---PGRRLRGSCDFCTKRKRKCDGDGVNRCSFCIAKNQPECHYSVRLLTGPRA--DSAGRRAASKA-------LAPGKAAKATXXXXXXXXXXXXXXXGG---PVSEHRYPAV---LPLKRARLSPSPATGLIGLRENVYIGEFFRTMGFLPFTTES 573 S +PA + P AAV P R+ SC FC KRKR CD RCS CI K QP CHY ++ L A +A RR +S + ++ G A+KA GG V+ P V + LKR RLS SPATGL+G+ EN ++ +FF G LP TTES Sbjct: 31 SAGQPAYTATPAEAAVEAAPPRQTYKSCTFCAKRKRACDSQRP-RCSLCIEKKQPYCHYPLKPLPKRAAAKPAAARRLSSSSPSSSDCSISSGDASKAKRLAEAQEGASYDT--GGVLATVNTRSMPTVRGRMSLKRCRLSSSPATGLVGMPENGFLCDFFGCFGILPLTTES 200
BLAST of mRNA_L-elsbetiae_contig175.4925.1 vs. uniprot
Match: A0A6H5L0W7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0W7_9PHAE) HSP 1 Score: 88.6 bits (218), Expect = 1.040e-16 Identity = 63/157 (40.13%), Postives = 80/157 (50.96%), Query Frame = 1 Query: 148 AAVPGRRLRGSCDFCTKRKRKCDGDGVNRCSFCIAKNQPECHYSVRLLTGPRADSAGRRAASK-----------ALAPGKAAKATXXXXXXXXXXXXXXXG-GPVSEHRYPAV---LPLKRARLSPSPATGLIGLRENVYIGEFFRTMGFLPFTTES 573 AA+P R SC FC KRKR CD RCS CI KNQP CHY ++ L P+ +A AA + +++ G A+KA V P V + LKR RLS SPATGL+G++EN ++G FF +G LP TTES Sbjct: 48 AALP-RHTYKSCTFCAKRKRSCDSRRP-RCSLCIEKNQPHCHYPLKPL--PKRAAAKPTAARRLXXXXXXXSDCSISSGDASKAKRLAEAHEVASYGAGSVLATVDTRSMPTVRGRMSLKRCRLSASPATGLVGMQENGFLGAFFGCLGILPLTTES 200
BLAST of mRNA_L-elsbetiae_contig175.4925.1 vs. uniprot
Match: D7FTC3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTC3_ECTSI) HSP 1 Score: 77.8 bits (190), Expect = 4.880e-13 Identity = 39/53 (73.58%), Postives = 45/53 (84.91%), Query Frame = 1 Query: 415 GGPVSEHRYPAVLPLKRARLSPSPATGLIGLRENVYIGEFFRTMGFLPFTTES 573 GG VS A++PLKRARLSPSPATGLIGL+EN YIG+FF+TMGFLP T+ES Sbjct: 20 GGMVST----AMIPLKRARLSPSPATGLIGLKENAYIGDFFQTMGFLPITSES 68
BLAST of mRNA_L-elsbetiae_contig175.4925.1 vs. uniprot
Match: A0A6H5KCM2_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCM2_9PHAE) HSP 1 Score: 69.7 bits (169), Expect = 1.240e-11 Identity = 30/49 (61.22%), Postives = 34/49 (69.39%), Query Frame = 1 Query: 169 LRGSCDFCTKRKRKCDGDGVNRCSFCIAKNQPECHYSVRLLTGPRADSA 315 +R SCDFC RK++CDGDGVNRCS+CI K P C YS R PRA A Sbjct: 45 IRKSCDFCNGRKKRCDGDGVNRCSYCIIKKNPHCIYSPRRPQKPRARKA 93
BLAST of mRNA_L-elsbetiae_contig175.4925.1 vs. uniprot
Match: D8LU27_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU27_ECTSI) HSP 1 Score: 70.5 bits (171), Expect = 1.250e-10 Identity = 48/136 (35.29%), Postives = 66/136 (48.53%), Query Frame = 1 Query: 166 RLRGSCDFCTKRKRKCDGDGVNRCSFCIAKNQPECHYSVRLLTGPRADSAGRRAASKALAPGKAAKATXXXXXXXXXXXXXXXGGPVSEHRYPAVLPLKRARLSPSPATGLIGLRENVYIGEFFRTMGFLPFTTES 573 R+R SC C + K+KCDG + CS CI +C Y R T P+ R+ + LA ++ + LPLKR RLS SPATGL+G++EN ++ +FF +GFLP TT S Sbjct: 16 RMRRSCCECARHKKKCDG--LTPCSRCIGAGV-QCIYIKRKSTHPQYQ---RKQQLRGLAGTQSTELQRHSLSGAFLARD--------------TLPLKRCRLSASPATGLVGMQENAFLSDFFGCVGFLPLTTRS 131
BLAST of mRNA_L-elsbetiae_contig175.4925.1 vs. uniprot
Match: A0A6H5K8E7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8E7_9PHAE) HSP 1 Score: 70.5 bits (171), Expect = 1.640e-10 Identity = 48/135 (35.56%), Postives = 66/135 (48.89%), Query Frame = 1 Query: 169 LRGSCDFCTKRKRKCDGDGVNRCSFCIAKNQPECHYSVRLLTGPRADSAGRRAASKALAPGKAAKATXXXXXXXXXXXXXXXGGPVSEHRYPAVLPLKRARLSPSPATGLIGLRENVYIGEFFRTMGFLPFTTES 573 +R SC C ++KRKCDG + CS C+ C YS R P GR+ + P A GG +LPLKR +LS SPATGL+G++EN ++ +FF +GF+PFT+ S Sbjct: 18 MRKSCGACGRKKRKCDG--LMPCSRCLRAGV-RCTYSKRK---PHQPQLGRQHQRRPRGP---AGVQTADMFRPSASGTLLPGG---------MLPLKRLKLSASPATGLVGMQENAFLSDFFGCVGFMPFTSRS 134
BLAST of mRNA_L-elsbetiae_contig175.4925.1 vs. uniprot
Match: A0A6H5JBJ1_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ1_9PHAE) HSP 1 Score: 70.1 bits (170), Expect = 2.200e-10 Identity = 48/135 (35.56%), Postives = 67/135 (49.63%), Query Frame = 1 Query: 169 LRGSCDFCTKRKRKCDGDGVNRCSFCIAKNQPECHYSVRLLTGPRADSAGRRAASKALAPGKAAKATXXXXXXXXXXXXXXXGGPVSEHRYPAVLPLKRARLSPSPATGLIGLRENVYIGEFFRTMGFLPFTTES 573 +R SC C ++KRKCDG + CS C+ ++ +C YS R P+ +R G A + G +LPLKR RLS SPATGL+G++EN ++ +FF +GFLP TT S Sbjct: 18 MRRSCCECGRKKRKCDG--MAPCSRCL-RSGVQCTYSKRKPHQPQTQHQHQRRPR-----GPACMPSTELLRHSSSGALQASG----------MLPLKRFRLSASPATGLVGMQENAFLSDFFGCVGFLPLTTPS 134
BLAST of mRNA_L-elsbetiae_contig175.4925.1 vs. uniprot
Match: A0A6H5JZG3_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZG3_9PHAE) HSP 1 Score: 69.3 bits (168), Expect = 4.030e-10 Identity = 51/148 (34.46%), Postives = 68/148 (45.95%), Query Frame = 1 Query: 139 PTGAAVPGRRLRGSCDFCTKRKRKCDGDGVNRCSFCIAKNQPECHYSVRLLTGPRA---DSAGRRAASKALAPGKAAKATXXXXXXXXXXXXXXXGGPVSEHRYPAVLPLKRARLSPSPATGLIGLRENVYIGEFFRTMGFLPFTTES 573 PT A + RR SC C ++KRKCDG + C C+ C Y R PRA RR + PG A K + P +L LKR + SPATGL+G+ EN ++G+FF +GF+P TT+S Sbjct: 7 PTPATLGMRR---SCSECGRKKRKCDG--LMPCRRCVDSGS-RCVYEKRRCHLPRAHHEQRQRRRLGHDGVPPGGATKQS----------------APAVAASACEMLALKRCKFKASPATGLVGMPENTFLGDFFACVGFVPLTTQS 132
BLAST of mRNA_L-elsbetiae_contig175.4925.1 vs. uniprot
Match: A0A6H5J7P2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7P2_9PHAE) HSP 1 Score: 68.9 bits (167), Expect = 5.610e-10 Identity = 31/37 (83.78%), Postives = 35/37 (94.59%), Query Frame = 1 Query: 463 RARLSPSPATGLIGLRENVYIGEFFRTMGFLPFTTES 573 RARLSPSPATGLIGL+EN YIG+FF+TMGFLP T+ES Sbjct: 20 RARLSPSPATGLIGLKENAYIGDFFQTMGFLPITSES 56 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig175.4925.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig175.4925.1 >prot_L-elsbetiae_contig175.4925.1 ID=prot_L-elsbetiae_contig175.4925.1|Name=mRNA_L-elsbetiae_contig175.4925.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=218bp WTSTADPCSKSTAKRAGQKFSKSVTGMLNVAAHADSSLAKPAASQMPTGAback to top mRNA from alignment at L-elsbetiae_contig175:48299..51823- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig175.4925.1 ID=mRNA_L-elsbetiae_contig175.4925.1|Name=mRNA_L-elsbetiae_contig175.4925.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3525bp|location=Sequence derived from alignment at L-elsbetiae_contig175:48299..51823- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig175:48299..51823- >mRNA_L-elsbetiae_contig175.4925.1 ID=mRNA_L-elsbetiae_contig175.4925.1|Name=mRNA_L-elsbetiae_contig175.4925.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1308bp|location=Sequence derived from alignment at L-elsbetiae_contig175:48299..51823- (Laminarionema elsbetiae ELsaHSoW15)back to top |