mRNA_L-elsbetiae_contig1747.4908.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1747.4908.1
Unique NamemRNA_L-elsbetiae_contig1747.4908.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig1747.4908.1 vs. uniprot
Match: A0A097IUF5_9PHAE (Malic enzyme n=1 Tax=Punctaria latifolia TaxID=90013 RepID=A0A097IUF5_9PHAE)

HSP 1 Score: 439 bits (1130), Expect = 6.320e-149
Identity = 230/248 (92.74%), Postives = 232/248 (93.55%), Query Frame = 1 
Query:    1 GTAATALAGIYAGLAATGRP--------FVVCGAGSAGMGVVQWLCKAMEKHGAPADEAAGNFWILDAGGLITGARASSVEEATRRFARPMGGEELVDGANVEQVVTKVRPEVLLGLSGAGRIWSPKTIEALAEGTERPLIFPMSNPSHKSECSAEDAATYAQGRGIFASGSPFEDTSYDGKVLPSNQSNNLYVFPGLALGAKLCQAKLVTDGMIMVASEALAGANRAEDLAEGRIYPGLSDVRSISV 720
            GTAATALAGIYAGLAATGRP        FVVCGAGSAGMGVVQWLCKAMEKHGAPADEAAGNFWILDA GLIT ARASSVEE TRRFARP+GGEEL DGANVEQVVTKVRPEVLLGLSGAGRIWSPKTIEALAEGT RPLIFPMSNPSHKSECSAEDAATYAQGRGIFASGSPFED SY GKV+PSNQSNNLYVFPGLALGAKLCQAKLVTDGMIM ASEALAGANRAEDLAEGRIYPGLSDVRSISV
Sbjct:  356 GTAATALAGIYAGLAATGRPYSDIRHLRFVVCGAGSAGMGVVQWLCKAMEKHGAPADEAAGNFWILDADGLITDARASSVEEPTRRFARPLGGEELADGANVEQVVTKVRPEVLLGLSGAGRIWSPKTIEALAEGTARPLIFPMSNPSHKSECSAEDAATYAQGRGIFASGSPFEDASYGGKVIPSNQSNNLYVFPGLALGAKLCQAKLVTDGMIMAASEALAGANRAEDLAEGRIYPGLSDVRSISV 603
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BLAST of mRNA_L-elsbetiae_contig1747.4908.1 vs. uniprot
Match: A0A097IUL3_9PHAE (Malic enzyme n=2 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A097IUL3_9PHAE)

HSP 1 Score: 396 bits (1018), Expect = 5.070e-132
Identity = 214/258 (82.95%), Postives = 220/258 (85.27%), Query Frame = 1 
Query:    1 GTAATALAGIYAGLAATGRPF--------VVCGAGSAGMGVVQWLCKAMEKHGAPADEAAGNFWILDAGGLITGARASSVEEATRRFARPM----------GGEELVDGANVEQVVTKVRPEVLLGLSGAGRIWSPKTIEALAEGTERPLIFPMSNPSHKSECSAEDAATYAQGRGIFASGSPFEDTSYDGKVLPSNQSNNLYVFPGLALGAKLCQAKLVTDGMIMVASEALAGANRAEDLAEGRIYPGLSDVRSISV 720
            GTAATALAGIYAGLAAT RPF        VVCGAGSAGMGVVQWLCKAMEKHGA  DEAAG FWILDA GLIT +R +SVE+ATRRFAR            G EEL DGANVEQVV KVRPEVLLGLSGAGRIWS  TIEALAEGT+RPLIFPMSNPSHKSECSAEDAA YA+GRGIFASGSPFED SYDGKVLPSNQSNNLYVFPGLALGAKLCQ+KLVTDGMIM ASEALA AN  EDLAEGRIYPGLSDVRSISV
Sbjct:  356 GTAATALAGIYAGLAATNRPFSDIRHLRFVVCGAGSAGMGVVQWLCKAMEKHGADPDEAAGKFWILDADGLITESRGNSVEKATRRFARKATPPAGEGGGKGDEELADGANVEQVVKKVRPEVLLGLSGAGRIWSSATIEALAEGTDRPLIFPMSNPSHKSECSAEDAAKYAKGRGIFASGSPFEDASYDGKVLPSNQSNNLYVFPGLALGAKLCQSKLVTDGMIMAASEALANANTPEDLAEGRIYPGLSDVRSISV 613
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BLAST of mRNA_L-elsbetiae_contig1747.4908.1 vs. uniprot
Match: A0A0A0V8F1_SACJA (Malate dehydrogenase n=2 Tax=Saccharina TaxID=309357 RepID=A0A0A0V8F1_SACJA)

HSP 1 Score: 394 bits (1012), Expect = 6.510e-131
Identity = 205/247 (83.00%), Postives = 218/247 (88.26%), Query Frame = 1 
Query:    1 GTAATALAGIYAGLAATGRP--------FVVCGAGSAGMGVVQWLCKAMEKHGAPADEAAGNFWILDAGGLITGARASSVEEATRRFARPMGGEELVDGANVEQVVTKVRPEVLLGLSGAGRIWSPKTIEALAEGTERPLIFPMSNPSHKSECSAEDAATYAQGRGIFASGSPFEDTSYDGKVLPSNQSNNLYVFPGLALGAKLCQAKLVTDGMIMVASEALAGANRAEDLAEGRIYPGLSDVRSIS 717
            GTAATALAGIYAGLAA G+P        FVVCGAGSAGMGV+QWLCKAMEKHGA  DEAA NFWILDA GL+T AR SSV++ T+RFARP    E+ DGA VE+VVTKVRP+VLLGLSGAGRIWSPKTIEALAEGTERPLIFPMSNPSHKSECSAEDAA YA+GRGIFASGSPFED ++DGKVLPSNQSNNLYVFPGLALGAKLCQA LVTDGMIM ASEALA  NR EDLA+GRIYPGLSDVRSIS
Sbjct:  372 GTAATALAGIYAGLAAIGKPYSDIRHMRFVVCGAGSAGMGVIQWLCKAMEKHGADHDEAARNFWILDADGLLTEARVSSVDKLTQRFARPAADGEMADGAGVEEVVTKVRPDVLLGLSGAGRIWSPKTIEALAEGTERPLIFPMSNPSHKSECSAEDAAKYAKGRGIFASGSPFEDAAFDGKVLPSNQSNNLYVFPGLALGAKLCQATLVTDGMIMAASEALAACNRPEDLAKGRIYPGLSDVRSIS 618
[Close]
BLAST of mRNA_L-elsbetiae_contig1747.4908.1 vs. uniprot
Match: A0A097IUJ4_9PHAE (Malic enzyme n=1 Tax=Desmarestia viridis TaxID=62313 RepID=A0A097IUJ4_9PHAE)

HSP 1 Score: 389 bits (1000), Expect = 2.660e-129
Identity = 205/248 (82.66%), Postives = 218/248 (87.90%), Query Frame = 1 
Query:    1 GTAATALAGIYAGLAATGRP--------FVVCGAGSAGMGVVQWLCKAMEKHGAPADEAAGNFWILDAGGLITGARASSVEEATRRFARPMGGEELVDGANVEQVVTKVRPEVLLGLSGAGRIWSPKTIEALAEGTERPLIFPMSNPSHKSECSAEDAATYAQGRGIFASGSPFEDTSYDGKVLPSNQSNNLYVFPGLALGAKLCQAKLVTDGMIMVASEALAGANRAEDLAEGRIYPGLSDVRSISV 720
            GTAATALAGIYAGL+A  RP        FVVCGAGSAGMGVV WL KAMEKHGA  +EAAGNFW+LDA GLIT  R +S+E+ATRRFARP G   L DGA+VE VV KVRPEVLLGLSGAGRIWSP+TIEALAEGTERPLIFPMSNPSHKSECSAEDAA YAQGRGIFASGSPFED S++GKVLPSNQSNNLYVFPGLALGAKLCQA +VTDGMIM ASEALAG+N+AEDLA GRIYPGLSDVRSISV
Sbjct:  369 GTAATALAGIYAGLSAMDRPYSDIRDLRFVVCGAGSAGMGVVHWLSKAMEKHGATPEEAAGNFWVLDADGLITEGRNASIEKATRRFARPAGDGTLEDGADVETVVKKVRPEVLLGLSGAGRIWSPQTIEALAEGTERPLIFPMSNPSHKSECSAEDAAKYAQGRGIFASGSPFEDASFEGKVLPSNQSNNLYVFPGLALGAKLCQATVVTDGMIMAASEALAGSNKAEDLAVGRIYPGLSDVRSISV 616
[Close]
BLAST of mRNA_L-elsbetiae_contig1747.4908.1 vs. uniprot
Match: A0A097IUJ1_9PHAE (Malic enzyme n=3 Tax=Sargassum TaxID=3015 RepID=A0A097IUJ1_9PHAE)

HSP 1 Score: 383 bits (983), Expect = 1.570e-126
Identity = 203/247 (82.19%), Postives = 211/247 (85.43%), Query Frame = 1 
Query:    1 GTAATALAGIYAGLAATGRP--------FVVCGAGSAGMGVVQWLCKAMEKHGAPADEAAGNFWILDAGGLITGARASSVEEATRRFARPMGGEELVDGANVEQVVTKVRPEVLLGLSGAGRIWSPKTIEALAEGTERPLIFPMSNPSHKSECSAEDAATYAQGRGIFASGSPFEDTSYDGKVLPSNQSNNLYVFPGLALGAKLCQAKLVTDGMIMVASEALAGANRAEDLAEGRIYPGLSDVRSIS 717
            GTAATALAGIYAGLAA  RP        FVVCGAGSAGMGVV WL KAMEKHGA  +EAA  FWILDA GLIT AR  S +E TRRFARP GG+EL DGANVE+VVTK+RPEVLLGLSGAGRIWSP+TI ALAEGTERPLIFPMSNPSHKSECSAEDAA YA GRGIFASGSPFED +Y GKVLPSNQSNNLYVFPGLALGAKLCQA LVTDGMIM ASEALA  N  EDL +GRIYPGLSDVRSIS
Sbjct:  377 GTAATALAGIYAGLAAMDRPYSDIRHLRFVVCGAGSAGMGVVLWLFKAMEKHGAGPEEAARKFWILDADGLITTARGDSFDETTRRFARPEGGDELNDGANVEEVVTKIRPEVLLGLSGAGRIWSPETITALAEGTERPLIFPMSNPSHKSECSAEDAAKYADGRGIFASGSPFEDVTYKGKVLPSNQSNNLYVFPGLALGAKLCQATLVTDGMIMAASEALASCNHPEDLVKGRIYPGLSDVRSIS 623
[Close]
BLAST of mRNA_L-elsbetiae_contig1747.4908.1 vs. uniprot
Match: A0A097IUI6_9PHAE (Malic enzyme n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A097IUI6_9PHAE)

HSP 1 Score: 361 bits (926), Expect = 3.850e-118
Identity = 183/247 (74.09%), Postives = 210/247 (85.02%), Query Frame = 1 
Query:    1 GTAATALAGIYAGLAATGRPF--------VVCGAGSAGMGVVQWLCKAMEKHGAPADEAAGNFWILDAGGLITGARASSVEEATRRFARPMGGEELVDGANVEQVVTKVRPEVLLGLSGAGRIWSPKTIEALAEGTERPLIFPMSNPSHKSECSAEDAATYAQGRGIFASGSPFEDTSYDGKVLPSNQSNNLYVFPGLALGAKLCQAKLVTDGMIMVASEALAGANRAEDLAEGRIYPGLSDVRSIS 717
            GTAATALAG+YAGLAA GRP+        VVCGAGSAG+GVVQWL KAME+HGA ++EA+ NFW+LD  GLIT +R+  +E   RRFARP+   EL +GA  E+VV  VRPEVLLGLSGAGRIW+P+T++ALA GT RPLIFPMSNPSHKSECSAEDAA YA+GRGIFASGSPFED +++GKV+PSNQSNNLYVFPGLALGAKLCQA LVTDGM+M ASEALA  NR EDLA+G+IYPGLS+VRSIS
Sbjct:  367 GTAATALAGVYAGLAAIGRPYSDIRRLRLVVCGAGSAGIGVVQWLSKAMEQHGATSEEASRNFWVLDEDGLITASRSGKLESHVRRFARPVEANELAEGATTEEVVRSVRPEVLLGLSGAGRIWTPETLKALARGTARPLIFPMSNPSHKSECSAEDAAMYAEGRGIFASGSPFEDVTFEGKVIPSNQSNNLYVFPGLALGAKLCQATLVTDGMLMAASEALAACNRPEDLAQGKIYPGLSNVRSIS 613
[Close]
BLAST of mRNA_L-elsbetiae_contig1747.4908.1 vs. uniprot
Match: D8LQY2_ECTSI (Malic_M domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY2_ECTSI)

HSP 1 Score: 263 bits (672), Expect = 6.210e-86
Identity = 131/144 (90.97%), Postives = 137/144 (95.14%), Query Frame = 1 
Query:  289 VVTKVRPEVLLGLSGAGRIWSPKTIEALAEGTERPLIFPMSNPSHKSECSAEDAATYAQGRGIFASGSPFEDTSYDGKVLPSNQSNNLYVFPGLALGAKLCQAKLVTDGMIMVASEALAGANRAEDLAEGRIYPGLSDVRSISV 720
            VVT+VRPEVLLGLSGAGRIWSPKTI+ALAEGTERPLIFPMSNPSHKSECSAEDAA YAQGRGIFASGSPFED SY GKVLPSNQSNNLY+FPGLALGAKLC+AKLVTDGMIM ASEALA +NR EDLAEGR+YPGLSDVR ISV
Sbjct:    2 VVTEVRPEVLLGLSGAGRIWSPKTIQALAEGTERPLIFPMSNPSHKSECSAEDAAKYAQGRGIFASGSPFEDASYGGKVLPSNQSNNLYIFPGLALGAKLCEAKLVTDGMIMAASEALAASNRPEDLAEGRVYPGLSDVRGISV 145
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BLAST of mRNA_L-elsbetiae_contig1747.4908.1 vs. uniprot
Match: A0A5B8MS54_9CHLO (NAD-dependent malic oxidoreductase n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MS54_9CHLO)

HSP 1 Score: 216 bits (550), Expect = 6.940e-63
Identity = 114/248 (45.97%), Postives = 164/248 (66.13%), Query Frame = 1 
Query:    1 GTAATALAGIYAGLAATG--------RPFVVCGAGSAGMGVVQWLCKAMEKHGAPADEAAGNFWILDAGGLITGARASSVEEATRRFARPMGGEELVDGANVEQVVTKVRPEVLLGLSGAGRIWSPKTIEALAEGTERPLIFPMSNPSHKSECSAEDAATYAQGRGIFASGSPFEDTSYDGKVLPSNQSNNLYVFPGLALGAKLCQAKLVTDGMIMVASEALAGANRAEDLAEGRIYPGLSDVRSISV 720
            GTA T L GIY  LA  G        +  VVCGAGSAGMGVVQ+L KAM KHG   +EA   FWILD  GLIT  R  +V    + F+R   G   ++G ++   + + +P +L+G S  G +++ + +EA++E  +RPL+ P+SNP+ K EC++E +A + +G+GIFA+GSP  +  YDG+ + S+Q+NN+Y+FPGLALGA + + K++TD M+M ASE+L      EDL++G IYP LS +R IS+
Sbjct:  326 GTATTVLGGIYGALAVKGSQAKDITEQTIVVCGAGSAGMGVVQFLAKAMTKHGLSEEEARERFWILDEDGLITRGRPGNVPSFVKPFSRKDAG---MEGQDLLSTIREAKPTILIGASTVGGLFTSEHLEAMSESCDRPLVMPLSNPTSKLECTSEQSAQWTKGKGIFAAGSPQPNCVYDGQEIASSQANNMYIFPGLALGASVGKCKIITDNMLMSASESLVNCITQEDLSKGSIYPKLSMIRDISL 570
[Close]
BLAST of mRNA_L-elsbetiae_contig1747.4908.1 vs. uniprot
Match: I0YPA4_COCSC (Malic-domain-containing protein n=2 Tax=Coccomyxa TaxID=41891 RepID=I0YPA4_COCSC)

HSP 1 Score: 214 bits (546), Expect = 1.690e-62
Identity = 116/248 (46.77%), Postives = 162/248 (65.32%), Query Frame = 1 
Query:    1 GTAATALAGIYAGLAATGRPF--------VVCGAGSAGMGVVQWLCKAMEKHGAPADEAAGNFWILDAGGLITGARASSVEEATRRFARPMGGEELVDGANVEQVVTKVRPEVLLGLSGAGRIWSPKTIEALAEGTERPLIFPMSNPSHKSECSAEDAATYAQGRGIFASGSPFEDTSYDGKVLPSNQSNNLYVFPGLALGAKLCQAKLVTDGMIMVASEALAGANRAEDLAEGRIYPGLSDVRSISV 720
            GTAATA+AG+Y  LA  G+ F        V+ GAGSAGMGV + L   M K G   +EA GNFW+LDA GLIT  R +++    + FAR    +E V+G ++ + V +V+P VL+GL+GAG++++ + +  + +  ERP+I PMSNP+HK EC+AE+A     GR IFASGSP  D  Y+G+ + S+Q+NN+ VFPGLALGA L     +TD M+M A+EAL      EDL +  +YP L D+R +S+
Sbjct:  302 GTAATAVAGVYGALAVQGKDFSELTKQRIVLIGAGSAGMGVARMLALGMLKQGISYEEALGNFWVLDADGLITIKRPTALNHTVKSFARKT--QEDVEGESLVETVRRVKPTVLVGLAGAGKLFTEEVLTLMGQHNERPIIMPMSNPTHKMECNAEEAQKATGGRAIFASGSPCADVQYEGRTIKSSQANNMVVFPGLALGAHLGATGTITDKMLMAAAEALPSCILQEDLEQDIVYPRLCDIREVSL 547
[Close]
BLAST of mRNA_L-elsbetiae_contig1747.4908.1 vs. uniprot
Match: A0A5J4YBF8_9CHLO (NAD malic enzyme n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YBF8_9CHLO)

HSP 1 Score: 215 bits (547), Expect = 1.740e-62
Identity = 119/248 (47.98%), Postives = 166/248 (66.94%), Query Frame = 1 
Query:    1 GTAATALAGIYAGLAATGRP--------FVVCGAGSAGMGVVQWLCKAMEKHGAPADEAAGNFWILDAGGLITGARASS-VEEATRRFARPMGGEELVDGANVEQVVTKVRPEVLLGLSGAGRIWSPKTIEALAEGTERPLIFPMSNPSHKSECSAEDAATYAQGRGIFASGSPFEDTSYDGKVLPSNQSNNLYVFPGLALGAKLCQAKLVTDGMIMVASEALAGANRAEDLAEGRIYPGLSDVRSIS 717
            GTAATALAG+Y  L   G+          VV GAGSAGMGV   + + M KHG   ++AA  FWILD  GLIT  R    + + TR FA    GE+ ++G ++  VV +V+P +L+GLSGAG +++P+ + A+ E  ERP+IFPMSNP+++SEC+++DA  Y  GR IFASGSP  D  Y+G+ + S+Q+NN+Y+FPGLA+GA L Q  ++TD M+  A+EAL      +DL +G +YP LS++R IS
Sbjct:  321 GTAATALAGVYGALKVQGKEAHSLTQQRIVVLGAGSAGMGVSTMMAQGMVKHGLDFEDAAKLFWILDKNGLITRKRPDEELTDVTRPFAAV--GEDDIEGESLLDVVKRVKPSILIGLSGAGPLFTPEVLTAMGECNERPIIFPMSNPTYRSECTSDDAQKYTGGRAIFASGSPQPDAHYEGRKICSSQANNMYIFPGLAMGAHLGQTGVITDMMMTAAAEALPKLIPQQDLDKGVVYPRLSNIRQIS 566
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1747.4908.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A097IUF5_9PHAE6.320e-14992.74Malic enzyme n=1 Tax=Punctaria latifolia TaxID=900... [more]
A0A097IUL3_9PHAE5.070e-13282.95Malic enzyme n=2 Tax=Scytosiphonaceae TaxID=2891 R... [more]
A0A0A0V8F1_SACJA6.510e-13183.00Malate dehydrogenase n=2 Tax=Saccharina TaxID=3093... [more]
A0A097IUJ4_9PHAE2.660e-12982.66Malic enzyme n=1 Tax=Desmarestia viridis TaxID=623... [more]
A0A097IUJ1_9PHAE1.570e-12682.19Malic enzyme n=3 Tax=Sargassum TaxID=3015 RepID=A0... [more]
A0A097IUI6_9PHAE3.850e-11874.09Malic enzyme n=1 Tax=Dictyopteris undulata TaxID=1... [more]
D8LQY2_ECTSI6.210e-8690.97Malic_M domain-containing protein n=1 Tax=Ectocarp... [more]
A0A5B8MS54_9CHLO6.940e-6345.97NAD-dependent malic oxidoreductase n=1 Tax=Chlorop... [more]
I0YPA4_COCSC1.690e-6246.77Malic-domain-containing protein n=2 Tax=Coccomyxa ... [more]
A0A5J4YBF8_9CHLO1.740e-6247.98NAD malic enzyme n=1 Tax=Trebouxia sp. A1-2 TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1747contigL-elsbetiae_contig1747:11675..17087 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score263.8
Seed ortholog evalue7.6e-68
Seed eggNOG ortholog2880.D8LQY2
KEGG rclassRC00105
KEGG koko:K00028,ko:K00029
KEGG ReactionR00214,R00216
KEGG Pathwayko00620,ko00710,ko01100,ko01120,ko01200,map00620,map00710,map01100,map01120,map01200
KEGG ModuleM00169,M00171,M00172
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.malate dehydrogenase (decarboxylating) (NAD ) activity
EggNOG OGsCOG0281@1,KOG1257@2759
Ec32 ortholog descriptionMalic enzyme, NAD-binding
Ec32 orthologEc-07_002070.1
EC1.1.1.39,1.1.1.40
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons8
Model size720
Cds size720
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1747.4908.1prot_L-elsbetiae_contig1747.4908.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1747 11675..17087 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815727.752324-CDS-L-elsbetiae_contig1747:11674..117331622815727.752324-CDS-L-elsbetiae_contig1747:11674..11733Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1747 11675..11733 +
1691683063.7139788-CDS-L-elsbetiae_contig1747:11674..117331691683063.7139788-CDS-L-elsbetiae_contig1747:11674..11733Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1747 11675..11733 +
1622815727.7664115-CDS-L-elsbetiae_contig1747:11976..120741622815727.7664115-CDS-L-elsbetiae_contig1747:11976..12074Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1747 11977..12074 +
1691683063.7269154-CDS-L-elsbetiae_contig1747:11976..120741691683063.7269154-CDS-L-elsbetiae_contig1747:11976..12074Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1747 11977..12074 +
1622815727.7759407-CDS-L-elsbetiae_contig1747:13198..133291622815727.7759407-CDS-L-elsbetiae_contig1747:13198..13329Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1747 13199..13329 +
1691683063.7351043-CDS-L-elsbetiae_contig1747:13198..133291691683063.7351043-CDS-L-elsbetiae_contig1747:13198..13329Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1747 13199..13329 +
1622815727.7853572-CDS-L-elsbetiae_contig1747:14303..143811622815727.7853572-CDS-L-elsbetiae_contig1747:14303..14381Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1747 14304..14381 +
1691683063.7438717-CDS-L-elsbetiae_contig1747:14303..143811691683063.7438717-CDS-L-elsbetiae_contig1747:14303..14381Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1747 14304..14381 +
1622815727.800281-CDS-L-elsbetiae_contig1747:15093..151711622815727.800281-CDS-L-elsbetiae_contig1747:15093..15171Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1747 15094..15171 +
1691683063.7626123-CDS-L-elsbetiae_contig1747:15093..151711691683063.7626123-CDS-L-elsbetiae_contig1747:15093..15171Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1747 15094..15171 +
1622815727.821033-CDS-L-elsbetiae_contig1747:15994..160721622815727.821033-CDS-L-elsbetiae_contig1747:15994..16072Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1747 15995..16072 +
1691683063.7801387-CDS-L-elsbetiae_contig1747:15994..160721691683063.7801387-CDS-L-elsbetiae_contig1747:15994..16072Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1747 15995..16072 +
1622815727.8330455-CDS-L-elsbetiae_contig1747:16511..165921622815727.8330455-CDS-L-elsbetiae_contig1747:16511..16592Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1747 16512..16592 +
1691683063.7947683-CDS-L-elsbetiae_contig1747:16511..165921691683063.7947683-CDS-L-elsbetiae_contig1747:16511..16592Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1747 16512..16592 +
1622815727.845845-CDS-L-elsbetiae_contig1747:16970..170871622815727.845845-CDS-L-elsbetiae_contig1747:16970..17087Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1747 16971..17087 +
1691683063.8032277-CDS-L-elsbetiae_contig1747:16970..170871691683063.8032277-CDS-L-elsbetiae_contig1747:16970..17087Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1747 16971..17087 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1747.4908.1

>prot_L-elsbetiae_contig1747.4908.1 ID=prot_L-elsbetiae_contig1747.4908.1|Name=mRNA_L-elsbetiae_contig1747.4908.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=240bp
GTAATALAGIYAGLAATGRPFVVCGAGSAGMGVVQWLCKAMEKHGAPADE
AAGNFWILDAGGLITGARASSVEEATRRFARPMGGEELVDGANVEQVVTK
VRPEVLLGLSGAGRIWSPKTIEALAEGTERPLIFPMSNPSHKSECSAEDA
ATYAQGRGIFASGSPFEDTSYDGKVLPSNQSNNLYVFPGLALGAKLCQAK
LVTDGMIMVASEALAGANRAEDLAEGRIYPGLSDVRSISV
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mRNA from alignment at L-elsbetiae_contig1747:11675..17087+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1747.4908.1 ID=mRNA_L-elsbetiae_contig1747.4908.1|Name=mRNA_L-elsbetiae_contig1747.4908.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5413bp|location=Sequence derived from alignment at L-elsbetiae_contig1747:11675..17087+ (Laminarionema elsbetiae ELsaHSoW15)
GGGACGGCGGCTACCGCCCTCGCTGGCATCTACGCAGGCCTGGCCGCAAC
CGGTAGGCCGTACAGCGACATACGCCACCTCAGGTGAGGTGCAGAGACCT
CTTCCTTCTTTGTGGTTGCTGCTGGCGTCTCGTTCCTTTGTTTTGTTTGT
CTCCCACCTCTCTGCTCGCTGCCGCTGGGTCTGTTGTTTTCGCGTGGGTT
CGTGCCGCTACTGCCCCGTTGGTCCAGTTCCTGTGTTTGATATTCCCTCT
CTCTTTCTCTCTCTTTATCTCTCTCTCTCTCTGTGTGTGGGTTATCCCGC
AGGTTTGTGGTGTGCGGAGCCGGCAGCGCGGGCATGGGCGTGGTCCAATG
GCTGTGCAAGGCCATGGAGAAGCATGGGGCCCCCGCCGACGAGGCTGCAG
GTACGAACACAAGCATCAAACAACTTGTGCACGTCACGTGCTGGTGGGCA
GTGACGCTATTCCCGCGCTAAATGATACACCCCGGAAAATCGGGAACGCT
TGTACGATACAGTAGCAGCAGCAGCAGCAGCAGCAGCAGCTCACTGAGCC
TGGCCTCAACTCGCTTGAAAGTACTTCTGGGTGCGTTTCGGACAGACTCA
GGCAGTGACCGTGGTGCTTGGGTTGGTGCACGCCTCCTTGCGGTGTTGCT
TTGAGGCTCTTTTTCTCTCGCAACCACGACGGCGAACCAGCGCTGGCCTT
CGGTTGCATCTTTCGGCTCTTGCGGCTTTCTCTTCCCGTGGTTTGGTCAA
TTCGCCGAGCTCTACGCGAAACATCGAGCTCTATGCCCAAACAGCGATCC
GCCAGCGGGTTTATTATTTTGTGGCGAACTCGTGGCATTTTCTGCGTGCG
TGCGTGCGTGCCTGTGTGTGTGTGTGTGTGTGCGTGTGTATGTTTTTTGT
CAGTCTGTCTTGCAGAGCCCTCTTTCGTGTGGGTTTCGACCCTCTCCCTC
CCGCAGGGAACACGCATTATAGACTCCTGACGGCAAGCAGCACACCAAGC
TGCATGCGATGTGTTCCCCTCTCGATTCTGCAGCGCGAACGGACCTTTCT
TCTCCATCACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCACCC
CCCCCCCCCCCCCCCCACCCCCCCCCCCCCGGCCCCNNNNNNNNNNGCAA
CCACCCCACCAGCCTCCCTCCGCGGTGTCCCCCCCCCGCTTCTGGGGGGC
GAACGGACCTTTTTTCTCCCCCCCCCCCCCCCCCCCCCCCATTCCCTCCG
AAAACAGCACGCACGCACTGCTGTTGTACCCAGGGCTCCGGGCCAAAGAA
CACGCCGTTTTTCGTTTTTATATTTATAAAAAAGCACAAAAGAAACTGCG
CGCGTTCTGCCCAAACAGTCTTGCGTATGGTAGTGTAAACAGACACCTAC
AGCAGCACCCTCTGTGTTTGCGTTTTTGGTTTGCTCGCTGGCTTGCTCGC
CCGCTCGCCCGTACCCCGCCTGAGCGGCTCCTTCACGGGTGCCTTCCCCA
TTGCCCGCCCTTCCTCTCTTGAAGGAAATTTCTGGATTCTGGATGCGGGC
GGGCTCATCACCGGTGCACGGGCCTCGAGCGTCGAGGAGGCAACCCGGCG
CTTCGCGAGGCCGATGGGCGGGGAAGAGCTGGTGGATGGGGCTAACGTAG
AACAGGTGTTGTTAGTCGGCGTTGTGCTCTTGCGCCTTCTTCTCCTTGGC
AGCGTATTGCTTGTGCTGGAAAAGAAGGAAGCGGTCGCGGGGTCTATTTC
TGTCGGCGTTGTACGAATCGAAGTTGTTTTTTTTTCGCTTCCTTCTGCGC
GGCGTGTTGTGTGCGTGCTGGGGAAGAAGAACGGAGCATGCCTTTTTAAA
ATAAACAATGAATCAAAGATGGAACCTACCCCACACTAGAGCAAGGACTC
GATATGGGGTTGAAACGGTATTCCGTATAGTGACGTTGTTGTTGTTGTTG
TTGTTGTTGTTGTTTCTCACATTAGCTCTCTAGTCCAAGACATCCTTGGG
GGCCCGTGGTCACAAAACAAGGCACACTCGACGCCGCGGGAGAAAACCAA
AACGTAATATTTGGCGAAGCGAGCAGAAAAAATAACCTAAAATATCAGAA
GAGTTCAACATCTCCCCTGCAAAGATTTGCGAGGTCGGCCAGCAAGTATG
CCTTTTACGCCCACGAAAACGTTACTTCTCCTTTTCCGGCCGTGGTGGTA
TGGTCGGGCATGCCCTGCACGTGCCATTCGGCCGAACAGAAAATAAAACA
TGAAGAGAGCCGTCCGTCTCTGCTCTTGCTTCTGTTGGGCGTAGGGGGCT
ATCTATCAAGCTGAAAGGAAGGGCGGGAGTCGAGAGCGTTGCCCCCGCGA
TGCAGGGCCTGCAACTCGCACGCACACACGCGCGGGTCACGCATCAATAA
TTGTGCCATCTGCAGGAGCAGCCCGAAGCCATAGTTGGCCATGAGTGCGC
CTGCGTGGTTTTAGTTTTTTTTTTTTAATGCGAGCATGAAGCCATCATCA
CCGTCATCGTTATCGTCAGCGTCATCCATGTCCCCCTTGTTCTTTTGCGT
AGCTCTTTTCCTCCCTCCTTTATACCTTGTCTTCTTGAATATATCCCAAC
TGTTGTTGCGTCTGTGTGCCGTGCATAAGGTGGTGACGAAAGTGCGGCCA
GAGGTTTTGCTCGGACTCTCCGGAGCGGGACGCATCTGGAGCCCCAAGAC
GATCGAGGTGACAGAACGAATCGGGAAGGGAAAATGAAACAAAATCAGAA
ACAGAAGGAGAAACAGAAACAGAAACACGGAAAAGAGGGAAACAGAGTTT
TCGTCCTTTTTTCTATTAAGGGTTGGGGTTGAGCCTATAGGGCTAGGACG
GGGTCGGTCGTAGCCGGTCGGGTTATTGGGGGTGACTCCCTCCTTTCCGC
TCTGCGCACTTTCGCGAACCGATCGTCTTGTTGACTCCGCCACGGTGAAC
TGCTGTCTGCGTGTACATCCCGTGGCCCGCCGGCTGCTGGAAATAAATTC
AGCGCGGAATCCAGGCAGGAGGGCAGGGCGTAAATATTTTCGTTTTTTCA
CCTTCTGCGTATTTTGCTTTATTTATACCTCTCACCGTCAGTGGTTTCAT
TTGTTTCAGATGGGCTCTCGTGGGCTATTAAAGCAAAACACTAAAGTTCT
TTGTACGTGTTGTGTGTGGTGTTCCTTTCGCATCCCGACCGGCCAGGTTG
CCCCCCCTGATTGCTTTCATTTTAGCTTTGTTGCGGGACAAGATAGTCCA
AATATACACGTACATGTATGTACTTCGCACTAGTAATATACATTTTGCCC
GTTTCTTCGCTGTATTTATTCCCCCATGTTAAGGCTGGCCCTTCTGACAC
CCGTGCATCTTTTCCCGCCCCCGCCGCGGGACCCCCTGCCCTTGTCCGTC
GCTTTTGGCGACACCGAAGGCGCTTGCGGAGGGAACCGAGCGCCCGCTGA
TATTCCCCATGTCCAACCCTTCCCACAAGAGCGAGTGCTCCGCAGAGGTG
AGTGCGAAAGTGCAAGGAAAAGACTCTTCGAAAAACCGAAATGGAACACA
AGCAAGTCAATCACGTCAAGAGAGTGAGGTTGTTTTTGTCATACTGACTG
TACGGAGCGAGCGGCTTCGGGTTCAATGGTGGATCATAACCAGGAGATGG
GAGGAGGGGGGGATCTGGGCTGTGTAGAGGTTTGCGCTGATCATGACATC
CCTGGTATTGGCACACGCCACCAAGGGGTTTCGAACAATTGCTGTGGGTT
AGTTATTCCATGTGGCCTTCCCGAGCGCGCTTTTCTCCCAAAAATTCGTG
TGAATGTCGAACATGTTTCGCCTCCCAGCGTTCGTTTGCACGTCCACCCT
CCGTTCTGTGCCTGACGTCACCGGAGTTTTGACGCTGCTCGGGATACCGG
CACAGCTGTTTTTTCTTCCTTAGCTGCTTCCGAAAATGCGTTGCGCGTGT
GCTGCTTCTCAGCGTGCAAGCGCCACCGCTGTAGCTCACGATAGCTATAA
TGGAAGCATACGTTTCGTTGGGCACTTGTGGACGTATCCGACAGTGCCGT
ATGCGACCGCTGGTATCTGAAGTCACCCCTCCACACATGAGGGTTATGCT
TCGTGCGATATGGTTTTGCTTTCAGTTGGTCCTTTGGCAGTGAAGCGTAA
TGACTAGGGCCAGTCTAAGGTTGTCAGCCTTACCTTCGCCCACGTCTCTC
TACTCTTTGCCCCCCCCTTTCGGGGTAGGGCCGAGCTTTTGGTTTTGCCA
GAGATGAAGCTTGAAATTATTCCCTATTTCCTCTGCTGCGTTAATCTGGT
TTACTCCATTTGTATTGTAGGACGCGGCAACGTACGCACAAGGCCGCGGA
ATCTTCGCCAGCGGATCACCCTTCGAAGACACCTCTTACGATGGAAAGGT
GCGCGCGTGCGGATTTCGCCCTGCCTCTCTGTTTCTCTCCCTCCCTCCTC
CCCTTCCCGCCCCCACCCCTTTTTCTTCCTCGCTCTCTGCCTCTCTTATC
TCTCTTTCCCCCAGGATCTCCCCCTTTCATTGCTTTGTACCGGCCCTTTC
TCTCTCACTTCTAACTCGTGCTTAGGATCATCTCTTCTATCTTCTTCGTG
GATTCAACATTTTTTTTTAACGTATTTTGGAACTGTGCACACGGTACCCG
ATGACTTTCATCTCTCGGCGTAGCAGGGGGAAGGACGGGGCACAGGTAGA
ATGTTCCCACTCCATCTGAACCGTCTGCCGCCGGACGATGCTGAATGGTT
CTGTTTGGCGTATCCGCATGATCCTCGCCTCATCTAATGCTCTTCGATCG
GGCACGCTTTGTGCGTGGTTTCTTGGGTTTCGATCAGGTCCTTCCAAGCA
ACCAGTCGAACAACCTCTACGTATTTCCTGGGCTTGCTCTCGGCGCCAAG
CTGTGCCAGGCTAAGCTGGTAAGAGGAGGAAGCGCGAAAACGCCAAAGGT
GGTGCGACAGGAAATACGGTCAATGTTTCACTGCAGTTTGTTTCGTCTCC
TCGAGCCCCAAACGTCTTGGAGAGGTTGTCATGCTGGGTTGCTGTCAACT
CCATCTGCAACACTTCCATCACCTACACAACGACGAAAACAGCAGCTCCT
GCCCCCGGCTCGGATTTTATTCTCTAGGTGACGATACTGGCTCGATCTTC
AACGCGGCTATAACGTTTTACGGTTCCCTGTTTTTCTTGCCCGGTTTTTG
TTCACGCAAGAGGTACCTGTTTTCGTTCATGTTCCTCTTCGCGCTCTTTG
CTACCCCCGTACTTTCCCCACCTTTATTCCTTGCCTTTACACCTAGGTAA
CGGATGGGATGATTATGGTGGCATCGGAAGCGCTAGCAGGGGCCAACCGG
GCGGAGGATCTGGCCGAGGGGAGAATATACCCGGGACTGTCGGATGTCCG
CAGTATCAGCGTC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1747:11675..17087+

>mRNA_L-elsbetiae_contig1747.4908.1 ID=mRNA_L-elsbetiae_contig1747.4908.1|Name=mRNA_L-elsbetiae_contig1747.4908.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1440bp|location=Sequence derived from alignment at L-elsbetiae_contig1747:11675..17087+ (Laminarionema elsbetiae ELsaHSoW15)
GGGACGGCGGCTACCGCCCTCGCTGGCATCTACGCAGGCCTGGCCGCAAC
CGGTAGGCCGGGACGGCGGCTACCGCCCTCGCTGGCATCTACGCAGGCCT
GGCCGCAACCGGTAGGCCGTTTGTGGTGTGCGGAGCCGGCAGCGCGGGCA
TGGGCGTGGTCCAATGGCTGTGCAAGGCCATGGAGAAGCATGGGGCCCCC
GCCGACGAGGCTGCAGGTTTGTGGTGTGCGGAGCCGGCAGCGCGGGCATG
GGCGTGGTCCAATGGCTGTGCAAGGCCATGGAGAAGCATGGGGCCCCCGC
CGACGAGGCTGCAGGAAATTTCTGGATTCTGGATGCGGGCGGGCTCATCA
CCGGTGCACGGGCCTCGAGCGTCGAGGAGGCAACCCGGCGCTTCGCGAGG
CCGATGGGCGGGGAAGAGCTGGTGGATGGGGCTAACGTAGAACAGGAAAT
TTCTGGATTCTGGATGCGGGCGGGCTCATCACCGGTGCACGGGCCTCGAG
CGTCGAGGAGGCAACCCGGCGCTTCGCGAGGCCGATGGGCGGGGAAGAGC
TGGTGGATGGGGCTAACGTAGAACAGGTGGTGACGAAAGTGCGGCCAGAG
GTTTTGCTCGGACTCTCCGGAGCGGGACGCATCTGGAGCCCCAAGACGAT
CGAGGTGGTGACGAAAGTGCGGCCAGAGGTTTTGCTCGGACTCTCCGGAG
CGGGACGCATCTGGAGCCCCAAGACGATCGAGGCGCTTGCGGAGGGAACC
GAGCGCCCGCTGATATTCCCCATGTCCAACCCTTCCCACAAGAGCGAGTG
CTCCGCAGAGGCGCTTGCGGAGGGAACCGAGCGCCCGCTGATATTCCCCA
TGTCCAACCCTTCCCACAAGAGCGAGTGCTCCGCAGAGGACGCGGCAACG
TACGCACAAGGCCGCGGAATCTTCGCCAGCGGATCACCCTTCGAAGACAC
CTCTTACGATGGAAAGGACGCGGCAACGTACGCACAAGGCCGCGGAATCT
TCGCCAGCGGATCACCCTTCGAAGACACCTCTTACGATGGAAAGGTCCTT
CCAAGCAACCAGTCGAACAACCTCTACGTATTTCCTGGGCTTGCTCTCGG
CGCCAAGCTGTGCCAGGCTAAGCTGGTCCTTCCAAGCAACCAGTCGAACA
ACCTCTACGTATTTCCTGGGCTTGCTCTCGGCGCCAAGCTGTGCCAGGCT
AAGCTGGTAACGGATGGGATGATTATGGTGGCATCGGAAGCGCTAGCAGG
GGCCAACCGGGCGGAGGATCTGGCCGAGGGGAGAATATACCCGGGACTGT
CGGATGTCCGCAGTATCAGCGTCGTAACGGATGGGATGATTATGGTGGCA
TCGGAAGCGCTAGCAGGGGCCAACCGGGCGGAGGATCTGGCCGAGGGGAG
AATATACCCGGGACTGTCGGATGTCCGCAGTATCAGCGTC
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